Pregenerated sensors for STK25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026277Ensembl transcript IDs: ENSMUST00000027498.14, ENSMUST00000133769.8, ENSMUST00000186287.3
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGATGACTACCCCCTGGCCAGCCTCCCACTATTGGGTTACAGCGTaGGCCTCCCCAGGGAGGCTGACAGCATCCACAAAGACTATGTCT | + |
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Preference number: 1 (lower is better) Translates to: RMTTPWPASHYWVTA*ASPGRLTASTKTMS Trigger: AGACATAGTCTTTGTGGATGCTGTCAGCCTCCCTGGGGAGGCTCACGCTGTAACCCAATAGTGGGAGGCTGGCCAGGGGGTAGTCATCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR GCA 90 bp | TGTGTAGGACTCCTGGCCCCCAGTGACCCTGTTCCTGTGTTGACTTaGAGGATGACTACCCCCTGGCCAGCCTCCCACTATTGGGTTACA | + |
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Preference number: 1 (lower is better) Translates to: CVGLLAPSDPVPVLT*RMTTPWPASHYWVT Trigger: TGTAACCCAATAGTGGGAGGCTGGCCAGGGGGTAGTCATCCTGCAAGTCAACACAGGAACAGGGTCACTGGGGGCCAGGAGTCCTACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR TCA 90 bp | TCAGTGGTACAAAGTGAAGTGCTGTGTAGGACTCCTGGCCCCCAGTaGCCCTGTTCCTGTGTTGACTTGCAGGATGACTACCCCCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: SVVQSEVLCRTPGPQ*PCSCVDLQDDYPLA Trigger: GGCCAGGGGGTAGTCATCCTGCAAGTCAACACAGGAACAGGGTCACTGGGGGCCAGGAGTCCTACACAGCACTTCACTTTGTACCACTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR TCA 90 bp | GCACCTGGGAGGCAAAGGCAGGCAGATCTGAGTTTGGCACTAGTCTaGTCTACAGAGTTTCAGGACAGCCAGGGCTACACAGAAAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: APGRQRQADLSLALV*STEFQDSQGYTEKA Trigger: GGCTTTTTCTGTGTAGCCCTGGCTGTCCTGAAACTCTGTAGATCAGACTAGTGCCAAACTCAGATCTGCCTGCCTTTGCCTCCCAGGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR GCA 90 bp | GGCATGCCCTTCACCCTGCTTGGACAAGAACCTCTGACAGAGGCTTaGAGGGACTGTAAGCATCATCCCAGGCACTTAATAACTGGCATC | + |
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Preference number: 1 (lower is better) Translates to: GMPFTLLGQEPLTEA*RDCKHHPRHLITGI Trigger: GATGCCAGTTATTAAGTGCCTGGGATGATGCTTACAGTCCCTGCAAGCCTCTGTCAGAGGTTCTTGTCCAAGCAGGGTGAAGGGCATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR TCA 90 bp | CAGCCTCCCACTATTGGGTTACAGCGTGAGCCTCCCCAGGGAGGCTaGCAGCATCCACAAAGACTATGTCTTCAAGCTCCAATTCAAATC | + |
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Preference number: 1 (lower is better) Translates to: QPPTIGLQREPPQGG*QHPQRLCLQAPIQI Trigger: GATTTGAATTGGAGCTTGAAGACATAGTCTTTGTGGATGCTGTCAGCCTCCCTGGGGAGGCTCACGCTGTAACCCAATAGTGGGAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR CCA 90 bp | TATGGGGTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTaGTACAAAGTGAAGTGCTGTGTAGGACTCCTGGCCCCCAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: YGVPLYKLPLSWESQ*YKVKCCVGLLAPSD Trigger: GTCACTGGGGGCCAGGAGTCCTACACAGCACTTCACTTTGTACCACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGACCCCATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR TCA 90 bp | TTGCACTGGAACAATCTGCCTTGTTTTAGGAGACAGGTGTCTTGCTaGTTAGGCTGGCTGGCTGAGCAGCAAATCCATCTCCAGCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: LHWNNLPCFRRQVSC*LGWLAEQQIHLQLH Trigger: GTGGAGCTGGAGATGGATTTGCTGCTCAGCCAGCCAGCCTAATCAGCAAGACACCTGTCTCCTAAAACAAGGCAGATTGTTCCAGTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR CCA 90 bp | CAGCTTTCAGGATATCTGCTGAGAAAGTTCAAGAACAGTAATGGCTaGCAGAAGCTCTGGGTGGTCTTTACCAACTTCTGCTTGTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: QLSGYLLRKFKNSNG*QKLWVVFTNFCLFF Trigger: GAAGAACAAGCAGAAGTTGGTAAAGACCACCCAGAGCTTCTGCCAGCCATTACTGTTCTTGAACTTTCTCAGCAGATATCCTGAAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR CCA 90 bp | AGATCAGCCCATTATAGCACCTTCTCTATGAAAATGGGATTAGTATaGGGTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: RSAHYSTFSMKMGLV*GPSVQTTTFLGESV Trigger: CACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGACCCCATACTAATCCCATTTTCATAGAGAAGGTGCTATAATGGGCTGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR GCA 90 bp | TATGTTGCACTGGAGTCTAGGCACAAAAAGTACAAGGCGCCCATCTaGTTATCTCTTTCTTCTTCACATTTTGAAGATCAGCCCATTATA | + |
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Preference number: 1 (lower is better) Translates to: YVALESRHKKYKAPI*LSLSSSHFEDQPII Trigger: TATAATGGGCTGATCTTCAAAATGTGAAGAAGAAAGAGATAAGCAGATGGGCGCCTTGTACTTTTTGTGCCTAGACTCCAGTGCAACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR CAA 90 bp | TGTGTTGACTTGCAGGATGACTACCCCCTGGCCAGCCTCCCACTATaGGGTTACAGCGTGAGCCTCCCCAGGGAGGCTGACAGCATCCAC | + |
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Preference number: 2 (lower is better) Translates to: CVDLQDDYPLASLPL*GYSVSLPREADSIH Trigger: GTGGATGCTGTCAGCCTCCCTGGGGAGGCTCACGCTGTAACCCAATAGTGGGAGGCTGGCCAGGGGGTAGTCATCCTGCAAGTCAACACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR CAA 90 bp | AAGTGCTGTGTAGGACTCCTGGCCCCCAGTGACCCTGTTCCTGTGTaGACTTGCAGGATGACTACCCCCTGGCCAGCCTCCCACTATTGG | + |
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Preference number: 2 (lower is better) Translates to: KCCVGLLAPSDPVPV*TCRMTTPWPASHYW Trigger: CCAATAGTGGGAGGCTGGCCAGGGGGTAGTCATCCTGCAAGTCAACACAGGAACAGGGTCACTGGGGGCCAGGAGTCCTACACAGCACTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR GCA 90 bp | GAGGGGTTCTGCTGCCCCCAACCTCCAGAAACAATGAAGACTCATGATGGCTGGGTTGCTGCCCAGTTCTaGAAGGGCTCCCAGGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: EGFCCPQPPETMKTHDGWVAAQF*KGSQVP Trigger: AGGCACCTGGGAGCCCTTGCAGAACTGGGCAGCAAC...CCAGCCATCATGAGTCTTCATTGTTTCTGGAGGTTGGGGGCAGCAGAACCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR CCA 90 bp | TCACAGGTGGATGGACGTCATCAAAAGGGCCAGCAGCTCACCAGGGAGACCCCCAGAAAGAAGGTAACCTaGCTTGTGAAGCCTACAGGC | + |
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Preference number: 2 (lower is better) Translates to: SQVDGRHQKGQQLTRETPRKKVT*LVKPTG Trigger: GCCTGTAGGCTTCACAAGCCAGGTTACCTTCTTTCT...GGGGGTCTCCCTGGTGAGCTGCTGGCCCTTTTGATGACGTCCATCCACCTGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR TCA 90 bp | GCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTCCAGACCTGCTGCAGGGACTaGGGAGTCTATATAGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: AHQGDPQVSLRTAHITLQTCCRD*GVYIEG Trigger: ACCTTCTATATAGACTCCTCAGTCCCTGCAGCAGGT...CTGGAGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTGACTTGCAGGATGACTACCCCCTGGCCAGCCTCCCACTATTGGGTTACGTTGCCAGGCTTGCATaGCAAGTGTTAGCTGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: CVDLQDDYPLASLPLLGYVARLA*QVLAAE Trigger: TTCAGCAGCTAACACTTGCCATGCAAGCCTGGCAAC...GTAACCCAATAGTGGGAGGCTGGCCAGGGGGTAGTCATCCTGCAAGTCAACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR GCA 90 bp | TATGCCGACTGGTTTGACCCTTTTCACAGGTGGATGGACGTCATCAAAAGGGCCCAGGTGTCAAGGGGCTaGTGTGTAGGGCAGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: YADWFDPFHRWMDVIKRAQVSRG*CVGQKE Trigger: TTCTTTCTGCCCTACACAGCAGCCCCTTGACACCTG...GGCCCTTTTGATGACGTCCATCCACCTGTGAAAAGGGTCAAACCAGTCGGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR GCA 90 bp | GTGTTAGCTGCTGAAGCCTTGCACTGGAACAATCTGCCTTGTTTTAGGAGACAGAGCCTCCCAAGTTGCTaGCCAGTTCTGCAAGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: VLAAEALHWNNLPCFRRQSLPSC*PVLQGL Trigger: GAGCCCTTGCAGAACTGGGCAGCAACTTGGGAGGCT...CTGTCTCCTAAAACAAGGCAGATTGTTCCAGTGCAAGGCTTCAGCAGCTAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR TCA 90 bp | ATGTTGCACTGGAGTCTAGGCACAAAAAGTACAAGGCGCCCATCTGCTTATCTCCAGACAACCAAGGAGTaGACACAGGTGTCAAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: MLHWSLGTKSTRRPSAYLQTTKE*TQVSRG Trigger: GCCCCTTGACACCTGTGTTCACTCCTTGGTTGTCTG...GAGATAAGCAGATGGGCGCCTTGTACTTTTTGTGCCTAGACTCCAGTGCAACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR TCA 90 bp | GAGGGGTTCTGCTGCCCCCAACCTCCAGAAACAATGAAGACTCATGATGGCTGGAAAACACACAGTACCTaGACTGACACCACAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: EGFCCPQPPETMKTHDGWKTHST*TDTTRQ Trigger: TTGCCTTGTGGTGTCAGTTCAGGTACTGTGTGTTTT...CCAGCCATCATGAGTCTTCATTGTTTCTGGAGGTTGGGGGCAGCAGAACCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR TCA 90 bp | GGGATTAGTATGGGGTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTAGACAGGTGTCTTGCTaGTTAGGCTGGCTGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GISMGSLCTNYHFLGRVSRQVSC*LGWLAE Trigger: CTCAGCCAGCCAGCCTAATCAGCAAGACACCTGTCT...ACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGACCCCATACTAATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR GCA 90 bp | TATGCCGACTGGTTTGACCCTTTTCACAGGTGGATGGACGTCATCAAAAGGGCCCAGATCAGCAAAAGCTaGTCTGGTTCCCATCGCACA | + |
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Preference number: 2 (lower is better) Translates to: YADWFDPFHRWMDVIKRAQISKS*SGSHRT Trigger: TGTGCGATGGGAACCAGAGCAGCTTTTGCTGATCTG...GGCCCTTTTGATGACGTCCATCCACCTGTGAAAAGGGTCAAACCAGTCGGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR CCA 90 bp | GTGTTAGCTGCTGAAGCCTTGCACTGGAACAATCTGCCTTGTTTTAGGAGACAGCAGCAAAAGCTGCTCTaGTTCCCATCGCACATGCCC | + |
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Preference number: 2 (lower is better) Translates to: VLAAEALHWNNLPCFRRQQQKLL*FPSHMP Trigger: GGGCATGTGCGATGGGAACCAGAGCAGCTTTTGCTG...CTGTCTCCTAAAACAAGGCAGATTGTTCCAGTGCAAGGCTTCAGCAGCTAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR CAA 90 bp | ATTCAGGTTGCCAGGCTTGCATGGCAAGTGTTAGCTGCTGAAGCCTaGCACTGGAACAATCTGCCTTGTTTTAGGAGACAGGTGTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: IQVARLAWQVLAAEA*HWNNLPCFRRQVSC Trigger: GCAAGACACCTGTCTCCTAAAACAAGGCAGATTGTTCCAGTGCAAGGCTTCAGCAGCTAACACTTGCCATGCAAGCCTGGCAACCTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR TCA 90 bp | GCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTCCAGTCGCACATGCCCATGTaGCTTAAAATAAAAGAACAT | + |
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Preference number: 2 (lower is better) Translates to: AHQGDPQVSLRTAHITLQSHMPM*LKIKEH Trigger: ATGTTCTTTTATTTTAAGTCACATGGGCATGTGCGA...CTGGAGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR TCA 90 bp | GTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTGGTACAAAGTGAAGTTGGACAAGAACCTCTaGCAGAGGCTTGCAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: VPLYKLPLSWESQWYKVKLDKNL*QRLAGT Trigger: AGTCCCTGCAAGCCTCTGTCAGAGGTTCTTGTCCAA...CTTCACTTTGTACCACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTGGTACAAAGTGAAGATCACTCTCCAGGGCTaGAGGCAGAGATCAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: VPLYKLPLSWESQWYKVKITLQG*RQRSEK Trigger: TTTCTCTGATCTCTGCCTCCAGCCCTGGAGAGTGAT...CTTCACTTTGTACCACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR TCA 90 bp | GGGATTAGTATGGGGTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTCGATTCGAGTACTCATaGAAACACACAGTACCTGAA | + |
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Preference number: 2 (lower is better) Translates to: GISMGSLCTNYHFLGRVSRFEYS*KHTVPE Trigger: TTCAGGTACTGTGTGTTTTCATGAGTACTCGAATCG...ACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGACCCCATACTAATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTGGTACAAAGTGAAGGTGAAGCCTACAGGCTaGTCAGTCTTTACAGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: VPLYKLPLSWESQWYKVKVKPTG*SVFTVV Trigger: TACAACTGTAAAGACTGACCAGCCTGTAGGCTTCAC...CTTCACTTTGTACCACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR CCA 90 bp | ATGTTGCACTGGAGTCTAGGCACAAAAAGTACAAGGCGCCCATCTGCTTATCTCGCCCTAAATACAGGTTaGATTGCTTCTTCTTCTACC | + |
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Preference number: 2 (lower is better) Translates to: MLHWSLGTKSTRRPSAYLALNTG*IASSST Trigger: GGTAGAAGAAGAAGCAATCCAACCTGTATTTAGGGC...GAGATAAGCAGATGGGCGCCTTGTACTTTTTGTGCCTAGACTCCAGTGCAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR TCA 90 bp | TTAGGCACTCTTGATAAGGTATGTGAATTTATGCCGACTGGTTTGACCCTTTTCTCTTCTCCCTCTCTGTaGAGAGTAGTGCATTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: LGTLDKVCEFMPTGLTLFSSPSL*RVVHSV Trigger: AACTGAATGCACTACTCTTCACAGAGAGGGAGAAGA...GAAAAGGGTCAAACCAGTCGGCATAAATTCACATACCTTATCAAGAGTGCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR GCA 90 bp | TTAGGCACTCTTGATAAGGTATGTGAATTTATGCCGACTGGTTTGACCCTTTTCACGAAGAGCCAAAGCTaGCCAATAGTTACTATGCTC | + |
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Preference number: 2 (lower is better) Translates to: LGTLDKVCEFMPTGLTLFTKSQS*PIVTML Trigger: GAGCATAGTAACTATTGGGCAGCTTTGGCTCTTCGT...GAAAAGGGTCAAACCAGTCGGCATAAATTCACATACCTTATCAAGAGTGCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR CCA 90 bp | TTAGGCACTCTTGATAAGGTATGTGAATTTATGCCGACTGGTTTGACCCTTTTCTATAGAAATCCTGTCTaGCCAGGCTCTGTACATCAG | + |
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Preference number: 2 (lower is better) Translates to: LGTLDKVCEFMPTGLTLFYRNPV*PGSVHQ Trigger: CTGATGTACAGAGCCTGGCCAGACAGGATTTCTATA...GAAAAGGGTCAAACCAGTCGGCATAAATTCACATACCTTATCAAGAGTGCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR TCA 72 bp | ACCCCCTGGCCAGCCTCCCACTATTGGGTTACAGCGTaGGCCTCCCCAGGGAGGCTGACAGCATCCACAAAG | + |
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Preference number: 3 (lower is better) Translates to: TPWPASHYWVTA*ASPGRLTASTK Trigger: CTTTGTGGATGCTGTCAGCCTCCCTGGGGAGGCTCACGCTGTAACCCAATAGTGGGAGGCTGGCCAGGGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR CAA 90 bp | TGTGTTGACTTGCAGGATGACTACCCCCTGGCCAGCCTCCCACTATTGGGTTACGGACACGTGTGCCACTaGAGTGTGCAGGTCAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: CVDLQDDYPLASLPLLGYGHVCH*SVQVRG Trigger: TCCTCTGACCTGCACACTCAAGTGGCACACGTGTCC...GTAACCCAATAGTGGGAGGCTGGCCAGGGGGTAGTCATCCTGCAAGTCAACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR GCA 72 bp | AAGGTCATACCAGCCTCCCAAGTTGCTGCCCAGTTCTaGAAGGGCTCCCAGGTGCCTAGCATAGCTTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: KVIPASQVAAQF*KGSQVPSIASD Trigger: GTCTGAAGCTATGCTAGGCACCTGGGAGCCCTTGCAGAACTGGGCAGCAACTTGGGAGGCTGGTATGACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR TCA 72 bp | GAGGCATGCCCTTCACCCTGCTTGGACAAGAACCTCTaGCAGAGGCTTGCAGGGACTGTAAGCATCATCCCA | + |
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Preference number: 3 (lower is better) Translates to: EACPSPCLDKNL*QRLAGTVSIIP Trigger: TGGGATGATGCTTACAGTCCCTGCAAGCCTCTGTCAGAGGTTCTTGTCCAAGCAGGGTGAAGGGCATGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR TCA 72 bp | CAAAGTGAAGTGCTGTGTAGGACTCCTGGCCCCCAGTaGCCCTGTTCCTGTGTTGACTTGCAGGATGACTAC | + |
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Preference number: 3 (lower is better) Translates to: QSEVLCRTPGPQ*PCSCVDLQDDY Trigger: GTAGTCATCCTGCAAGTCAACACAGGAACAGGGTCACTGGGGGCCAGGAGTCCTACACAGCACTTCACTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR GCA 72 bp | CCACTTTCTTGGGAGAGTCAGTGGTACAAAGTGAAGTaGTGTGTAGGACTCCTGGCCCCCAGTGACCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: PLSWESQWYKVK*CVGLLAPSDPV Trigger: AACAGGGTCACTGGGGGCCAGGAGTCCTACACAGCACTTCACTTTGTACCACTGACTCTCCCAAGAAAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR CCA 72 bp | TTTATGCCGACTGGTTTGACCCTTTTCACAGGTGGATaGACGTCATCAAAAGGGCCAGCAGCTCACCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: FMPTGLTLFTGG*TSSKGPAAHQG Trigger: TCCCTGGTGAGCTGCTGGCCCTTTTGATGACGTCCATCCACCTGTGAAAAGGGTCAAACCAGTCGGCATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR CAA 90 bp | GGGATTAGTATGGGGTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTTACCAGCCTCCCAAGTaGCTGCCCAGTTCTGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: GISMGSLCTNYHFLGRVSYQPPK*LPSSAR Trigger: CCTTGCAGAACTGGGCAGCAACTTGGGAGGCTGGTA...ACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGACCCCATACTAATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR TCA 72 bp | AGGCAAAGGCAGGCAGATCTGAGTTTGGCACTAGTCTaGTCTACAGAGTTTCAGGACAGCCAGGGCTACACA | + |
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Preference number: 3 (lower is better) Translates to: RQRQADLSLALV*STEFQDSQGYT Trigger: TGTGTAGCCCTGGCTGTCCTGAAACTCTGTAGATCAGACTAGTGCCAAACTCAGATCTGCCTGCCTTTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR CAA 90 bp | GGGATTAGTATGGGGTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTCCACCAGCATCCCCTTaGCCCTACTTTGTTCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: GISMGSLCTNYHFLGRVSPPASP*PYFVLQ Trigger: CTGAAGAACAAAGTAGGGCAAAGGGGATGCTGGTGG...ACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGACCCCATACTAATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR-3UTR CAA 90 bp | TGTGTTGACTTGCAGGATGACTACCCCCTGGCCAGCCTCCCACTATTGGGTTACAGCCCTAAATACAGGTaGGATTGCTTCTTCTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: CVDLQDDYPLASLPLLGYSPKYR*DCFFFY Trigger: GTAGAAGAAGAAGCAATCCAACCTGTATTTAGGGCT...GTAACCCAATAGTGGGAGGCTGGCCAGGGGGTAGTCATCCTGCAAGTCAACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR TCA 72 bp | AGTTACTATGCTCCTTGGTCTACCTGCTGCAGGGACTaGGGAGTCTATATAGAAGGTCATACCAGCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: SYYAPWSTCCRD*GVYIEGHTSLP Trigger: TGGGAGGCTGGTATGACCTTCTATATAGACTCCTCAGTCCCTGCAGCAGGTAGACCAAGGAGCATAGTAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| 3UTR TCA 72 bp | TTAATAACTGGCATCCTCCTACCAGATAGGTGGCACTaGCCCTGGAATGGGCCTCATAAAAACTCTAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LITGILLPDRWH*PWNGPHKNSRR Trigger: CCTCCTAGAGTTTTTATGAGGCCCATTCCAGGGTCAGTGCCACCTATCTGGTAGGAGGATGCCAGTTATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| 3UTR TCA 72 bp | AACAATCTGCCTTGTTTTAGGAGACAGGTGTCTTGCTaGTTAGGCTGGCTGGCTGAGCAGCAAATCCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: NNLPCFRRQVSC*LGWLAEQQIHL Trigger: GAGATGGATTTGCTGCTCAGCCAGCCAGCCTAATCAGCAAGACACCTGTCTCCTAAAACAAGGCAGATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| 3UTR GCA 72 bp | ATTACTCTAGGGGTTAGTCTCCAGATCAGCAAAAGCTaGTCTGGTTCCCATCGCACATGCCCATGTGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: ITLGVSLQISKS*SGSHRTCPCDL Trigger: TAAGTCACATGGGCATGTGCGATGGGAACCAGAGCAGCTTTTGCTGATCTGGAGACTAACCCCTAGAGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| 3UTR CCA 72 bp | CTTGCATGGCAAGTGTTAGCTGCTGAAGCCTTGCACTaGAACAATCTGCCTTGTTTTAGGAGACAGGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LAWQVLAAEALH*NNLPCFRRQVS Trigger: AGACACCTGTCTCCTAAAACAAGGCAGATTGTTCCAGTGCAAGGCTTCAGCAGCTAACACTTGCCATGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTGGTACAAAGTGAAGTTTATGCCGACTGGTTaGACCCTTTTCACAGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VPLYKLPLSWESQWYKVKFMPTG*TLFTGG Trigger: TCCACCTGTGAAAAGGGTCAAACCAGTCGGCATAAA...CTTCACTTTGTACCACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTGCACTGGAGTCTAGGCACAAAAAGTACAAGGCGCCCATCTGCTTATCTCGTTTGCTGCCATTCATaGAGCCTAAGGCAAATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: MLHWSLGTKSTRRPSAYLVCCHS*SLRQIS Trigger: GGAAATTTGCCTTAGGCTCAATGAATGGCAGCAAAC...GAGATAAGCAGATGGGCGCCTTGTACTTTTTGTGCCTAGACTCCAGTGCAACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| 3UTR CCA 72 bp | GGATATCTGCTGAGAAAGTTCAAGAACAGTAATGGCTaGCAGAAGCTCTGGGTGGTCTTTACCAACTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GYLLRKFKNSNG*QKLWVVFTNFC Trigger: GCAGAAGTTGGTAAAGACCACCCAGAGCTTCTGCCAGCCATTACTGTTCTTGAACTTTCTCAGCAGATATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| 3UTR CCA 72 bp | CATTATAGCACCTTCTCTATGAAAATGGGATTAGTATaGGGTCCCTCTGTACAAACTACCACTTTCTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HYSTFSMKMGLV*GPSVQTTTFLG Trigger: TCCCAAGAAAGTGGTAGTTTGTACAGAGGGACCCCATACTAATCCCATTTTCATAGAGAAGGTGCTATAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| 3UTR CAA 72 bp | GTAGGACTCCTGGCCCCCAGTGACCCTGTTCCTGTGTaGACTTGCAGGATGACTACCCCCTGGCCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGLLAPSDPVPV*TCRMTTPWPAS Trigger: GGAGGCTGGCCAGGGGGTAGTCATCCTGCAAGTCAACACAGGAACAGGGTCACTGGGGGCCAGGAGTCCTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | GAGGGGTTCTGCTGCCCCCAACCTCCAGAAACAATGAAGACTCATGATGGCTGGGTCCAGATGGGACCCTaGTCCCCATCCTCAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EGFCCPQPPETMKTHDGWVQMGP*SPSSAS Trigger: CGAGGCTGAGGATGGGGAGCAGGGTCCCATCTGGAC...CCAGCCATCATGAGTCTTCATTGTTTCTGGAGGTTGGGGGCAGCAGAACCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR TCA 90 bp | TCACAGGTGGATGGACGTCATCAAAAGGGCCAGCAGCTCACCAGGGAGACCCCCCACCATCAGCTTGTCTaGGATGCCAGGACAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SQVDGRHQKGQQLTRETPHHQLV*DARTGF Trigger: GAATCCTGTCCTGGCATCTCAGACAAGCTGATGGTG...GGGGGTCTCCCTGGTGAGCTGCTGGCCCTTTTGATGACGTCCATCCACCTGTGA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | GCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTCCAGGTGCAGCTTGCTATGTaGACTTGGCCGGATGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHQGDPQVSLRTAHITLQVQLAM*TWPDGW Trigger: CCAACCATCCGGCCAAGTCCACATAGCAAGCTGCAC...CTGGAGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR TCA 90 bp | GCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTCCAGGCACGTTGGCAGCTTTaGTATCTCGGTGGATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AHQGDPQVSLRTAHITLQARWQL*YLGGSC Trigger: GCAAGATCCACCGAGATATCAAAGCTGCCAACGTGC...CTGGAGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR TCA 90 bp | GCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTCCAGATTCCTCAGCCAGGCTaGAGGCATTCTCTAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AHQGDPQVSLRTAHITLQIPQPG*RHSLAP Trigger: AGGAGCTAGAGAATGCCTTCAGCCTGGCTGAGGAAT...CTGGAGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTTGTGTGTCTGTGAGCTaGCCAGCCACACCGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSPGRPPSFTQDCSHHSCVSVS*PATPKS Trigger: AGACTTCGGTGTGGCTGGGCAGCTCACAGACACACA...AGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | TGTGTTGACTTGCAGGATGACTACCCCCTGGCCAGCCTCCCACTATTGGGTTACGGCTTCTGTGAGCTGTaGAGAGCAGTTCCCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVDLQDDYPLASLPLLGYGFCEL*RAVPLC Trigger: GCACAAGGGAACTGCTCTGCACAGCTCACAGAAGCC...GTAACCCAATAGTGGGAGGCTGGCCAGGGGGTAGTCATCCTGCAAGTCAACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | TATGCCGACTGGTTTGACCCTTTTCACAGGTGGATGGACGTCATCAAAAGGGCCGTGGAGATCAGAGTTTaGCGGCTCCCCCTTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YADWFDPFHRWMDVIKRAVEIRV*RLPLGQ Trigger: CTGGCCAAGGGGGAGCCGCCAAACTCTGATCTCCAC...GGCCCTTTTGATGACGTCCATCCACCTGTGAAAAGGGTCAAACCAGTCGGCATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | GCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTCCAGTTGAAGGGTTTGCTGTaGTGGCCCTCCAATGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AHQGDPQVSLRTAHITLQLKGLL*WPSNVG Trigger: ACCCACATTGGAGGGCCACCACAGCAAACCCTTCAA...CTGGAGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | ATGCCCTTCACCCTGCTTGGACAAGAACCTCTGACAGAGGCTTGCAGGGACTGTACTTGGCCGGATGGTTaGAGGAAACGTCCAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: MPFTLLGQEPLTEACRDCTWPDG*RKRPDG Trigger: CCCATCTGGACGTTTCCTCCAACCATCCGGCCAAGT...ACAGTCCCTGCAAGCCTCTGTCAGAGGTTCTTGTCCAAGCAGGGTGAAGGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTCCCCAAATGAGCCTTTaGCAATGCGGTCAAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSPGRPPSFTQDCSHHSPQMSL*QCGQAW Trigger: CCAAGCTTGACCGCATTGGCAAAGGCTCATTTGGGG...AGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTTTCCCTTGTGCAGCTTaGTATGTGGACTTGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSPGRPPSFTQDCSHHSFPCAA*YVDLAG Trigger: TCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAA...AGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | GAGGGGTTCTGCTGCCCCCAACCTCCAGAAACAATGAAGACTCATGATGGCTGGCCACCGCTCTGCTTGTaGTTCTCTTTGAGCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGFCCPQPPETMKTHDGWPPLCL*FSLSSP Trigger: TGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGTGG...CCAGCCATCATGAGTCTTCATTGTTTCTGGAGGTTGGGGGCAGCAGAACCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | GAGGGGTTCTGCTGCCCCCAACCTCCAGAAACAATGAAGACTCATGATGGCTGGGCCCTCCAATGTGGGTaGGTTGTTCTTGGGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGFCCPQPPETMKTHDGWALQCG*VVLGNQ Trigger: CTGATTCCCAAGAACAACCCACCCACATTGGAGGGC...CCAGCCATCATGAGTCTTCATTGTTTCTGGAGGTTGGGGGCAGCAGAACCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | TATGCCGACTGGTTTGACCCTTTTCACAGGTGGATGGACGTCATCAAAAGGGCCGCTTCAGGAGCTCCTTaGCAGTGGGTCGGAATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: YADWFDPFHRWMDVIKRAASGAP*QWVGIV Trigger: CACGATTCCGACCCACTGCCAAGGAGCTCCTGAAGC...GGCCCTTTTGATGACGTCCATCCACCTGTGAAAAGGGTCAAACCAGTCGGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | TGTGTTGACTTGCAGGATGACTACCCCCTGGCCAGCCTCCCACTATTGGGTTACCAGAATCCTCAGAACTaGACTCCTCTCCATGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CVDLQDDYPLASLPLLGYQNPQN*TPLHAP Trigger: AGGGGCATGGAGAGGAGTCCAGTTCTGAGGATTCTG...GTAACCCAATAGTGGGAGGCTGGCCAGGGGGTAGTCATCCTGCAAGTCAACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTAGTGTGGACAAGCACTaGGACCTTGGCTGTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSPGRPPSFTQDCSHHSSVDKH*DLGCLL Trigger: CAAGAGACAGCCAAGGTCCCAGTGCTTGTCCACACT...AGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| 3UTR CAA 72 bp | AGGAGTCTATATAGAAGGTCATACCAGCCTCCCAAGTaGCTGCCCAGTTCTGCAAGGGCTCCCAGGTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: RSLYRRSYQPPK*LPSSARAPRCL Trigger: TAGGCACCTGGGAGCCCTTGCAGAACTGGGCAGCAACTTGGGAGGCTGGTATGACCTTCTATATAGACTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR TCA 90 bp | GAGGGGTTCTGCTGCCCCCAACCTCCAGAAACAATGAAGACTCATGATGGCTGGGCTTGTGCTTCTCTTTaGGCTCTCCAAAGACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EGFCCPQPPETMKTHDGWACASL*ALQRQD Trigger: GTCCTGTCTTTGGAGAGCTCAAAGAGAAGCACAAGC...CCAGCCATCATGAGTCTTCATTGTTTCTGGAGGTTGGGGGCAGCAGAACCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTCTTGATAACCTCAGGTaGCATCCAGAAGGGTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SSSPGRPPSFTQDCSHHSLDNLR*HPEGCT Trigger: GGTACACCCTTCTGGATGGCACCTGAGGTTATCAAG...AGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | TATGCCGACTGGTTTGACCCTTTTCACAGGTGGATGGACGTCATCAAAAGGGCCACGCTCCCACCGCTCTaGTTGTGCTTCTCTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YADWFDPFHRWMDVIKRATLPPL*LCFSLS Trigger: GCTCAAAGAGAAGCACAAGCAGAGCGGTGGGAGCGT...GGCCCTTTTGATGACGTCCATCCACCTGTGAAAAGGGTCAAACCAGTCGGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTTCAGCTTGTCTGAGATaGCAGGACAGGATTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSPGRPPSFTQDCSHHSSACLR*QDRIPQ Trigger: CTGAGGAATCCTGTCCTGGCATCTCAGACAAGCTGA...AGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | TATGCCGACTGGTTTGACCCTTTTCACAGGTGGATGGACGTCATCAAAAGGGCCACACGCTCCACCAGGTaGACCATCAGCTTGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YADWFDPFHRWMDVIKRATRSTR*TISLSE Trigger: CTCAGACAAGCTGATGGTGCACCTGGTGGAGCGTGT...GGCCCTTTTGATGACGTCCATCCACCTGTGAAAAGGGTCAAACCAGTCGGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | ATGCCCTTCACCCTGCTTGGACAAGAACCTCTGACAGAGGCTTGCAGGGACTGTATGTCAGGTGGTTCCTaGTGTGTGAGAACCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MPFTLLGQEPLTEACRDCMSGGS*CVRTSA Trigger: TGCAGAGGTTCTCACACAGCAGGAACCACCTGACAT...ACAGTCCCTGCAAGCCTCTGTCAGAGGTTCTTGTCCAAGCAGGGTGAAGGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | TGTGTTGACTTGCAGGATGACTACCCCCTGGCCAGCCTCCCACTATTGGGTTACAGAGCAGTTCCCTTGTaGAGCTTGCTATGTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: CVDLQDDYPLASLPLLGYRAVPL*SLLCGL Trigger: AAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCT...GTAACCCAATAGTGGGAGGCTGGCCAGGGGGTAGTCATCCTGCAAGTCAACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | GTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTGGTACAAAGTGAAGGGAGCTCCTTGGCAGTaGGTCGGAATCGTGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPLYKLPLSWESQWYKVKGAPWQ*VGIVGP Trigger: AGGACCCACGATTCCGACCCACTGCCAAGGAGCTCC...CTTCACTTTGTACCACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | GGGATTAGTATGGGGTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTGAGGAAACGTCCAGATaGGACCCTGCTCCCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GISMGSLCTNYHFLGRVSEETSR*DPAPHP Trigger: AGGATGGGGAGCAGGGTCCCATCTGGACGTTTCCTC...ACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGACCCCATACTAATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR TCA 90 bp | GTGTTAGCTGCTGAAGCCTTGCACTGGAACAATCTGCCTTGTTTTAGGAGACAGGTACACCTCCCCAAATaGGCCTTTGCCAATGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLAAEALHWNNLPCFRRQVHLPK*AFANAV Trigger: GACCGCATTGGCAAAGGCTCATTTGGGGAGGTGTAC...CTGTCTCCTAAAACAAGGCAGATTGTTCCAGTGCAAGGCTTCAGCAGCTAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR TCA 90 bp | GGGATTAGTATGGGGTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTGTGGATCTTGCGCTCTaGGTGCAGATAATCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GISMGSLCTNYHFLGRVSVDLAL*VQIIQA Trigger: GGCCTGGATTATCTGCACTCAGAGCGCAAGATCCAC...ACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGACCCCATACTAATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | GAGGGGTTCTGCTGCCCCCAACCTCCAGAAACAATGAAGACTCATGATGGCTGGTATCTCGGTGGATCTTaGGCTCTGAGTGCAGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: EGFCCPQPPETMKTHDGWYLGGS*ALSADN Trigger: ATTATCTGCACTCAGAGCGCAAGATCCACCGAGATA...CCAGCCATCATGAGTCTTCATTGTTTCTGGAGGTTGGGGGCAGCAGAACCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | GGGATTAGTATGGGGTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTAGGACTCGCATAGGGTaGAGATCAGAGTTTGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GISMGSLCTNYHFLGRVSRTRIG*RSEFGG Trigger: GCCGCCAAACTCTGATCTCCACCCTATGCGAGTCCT...ACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGACCCCATACTAATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| 3UTR CAA 72 bp | GCCAGGCTTGCATGGCAAGTGTTAGCTGCTGAAGCCTaGCACTGGAACAATCTGCCTTGTTTTAGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ARLAWQVLAAEA*HWNNLPCFRRQ Trigger: CTGTCTCCTAAAACAAGGCAGATTGTTCCAGTGCAAGGCTTCAGCAGCTAACACTTGCCATGCAAGCCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | ATGTTGCACTGGAGTCTAGGCACAAAAAGTACAAGGCGCCCATCTGCTTATCTCCAAGCACTGGGACCTTaGCTGTCTCTTGATAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MLHWSLGTKSTRRPSAYLQALGP*LSLDRL Trigger: GAGCCTATCAAGAGACAGCCAAGGTCCCAGTGCTTG...GAGATAAGCAGATGGGCGCCTTGTACTTTTTGTGCCTAGACTCCAGTGCAACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | GGGATTAGTATGGGGTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTTCTCCCGCAAGATGGTaGCAATATAGGTCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GISMGSLCTNYHFLGRVSSPARW*QYRSLP Trigger: TGGAAGAGACCTATATTGCCACCATCTTGCGGGAGA...ACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGACCCCATACTAATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCTTCCAAGTCAGTCCTTTTACAGCTCAAAACAAACAGCATTCTTCTCCTGGGTGGGTTGTTCTTaGGAATCAGGAACAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLPSQSFYSSKQTAFFSWVGCS*ESGTGL Trigger: GAGTCCTGTTCCTGATTCCCAAGAACAACCCACCCA...GGAGAAGAATGCTGTTTGTTTTGAGCTGTAAAAGGACTGACTTGGAAGCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR TCA 90 bp | TTAGGCACTCTTGATAAGGTATGTGAATTTATGCCGACTGGTTTGACCCTTTTCACCAGATGTCAGCCTTaGAGTCATAGGCCGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGTLDKVCEFMPTGLTLFTRCQP*SHRPTA Trigger: AGCAGTCGGCCTATGACTTCAAGGCTGACATCTGGT...GAAAAGGGTCAAACCAGTCGGCATAAATTCACATACCTTATCAAGAGTGCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR TCA 90 bp | TTAGGCACTCTTGATAAGGTATGTGAATTTATGCCGACTGGTTTGACCCTTTTCCCTCTACAAACTCCTTaGAGGGTTTGCTGTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGTLDKVCEFMPTGLTLFPLQTP*RVCCGG Trigger: GCCACCACAGCAAACCCTTCAAGGAGTTTGTAGAGG...GAAAAGGGTCAAACCAGTCGGCATAAATTCACATACCTTATCAAGAGTGCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR GCA 90 bp | TTAGGCACTCTTGATAAGGTATGTGAATTTATGCCGACTGGTTTGACCCTTTTCTTTCAGCAAGTCCAGTaGAGAGCCACCACCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGTLDKVCEFMPTGLTLFFQQVQ*RATTQV Trigger: TACCTGGGTGGTGGCTCTGCACTGGACTTGCTGAAA...GAAAAGGGTCAAACCAGTCGGCATAAATTCACATACCTTATCAAGAGTGCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CCA 90 bp | TTAGGCACTCTTGATAAGGTATGTGAATTTATGCCGACTGGTTTGACCCTTTTCCGGGTAGATGTCAGGTaGTTCCTGCTGTGTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGTLDKVCEFMPTGLTLFRVDVR*FLLCEN Trigger: GTTCTCACACAGCAGGAACCACCTGACATCTACCCG...GAAAAGGGTCAAACCAGTCGGCATAAATTCACATACCTTATCAAGAGTGCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| 3UTR CAA 72 bp | TTAGTATGGGGTCCCTCTGTACAAACTACCACTTTCTaGGGAGAGTCAGTGGTACAAAGTGAAGTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVWGPSVQTTTF*GESVVQSEVLC Trigger: ACACAGCACTTCACTTTGTACCACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGACCCCATACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| 3UTR CAA 72 bp | ACTCTTGATAAGGTATGTGAATTTATGCCGACTGGTTaGACCCTTTTCACAGGTGGATGGACGTCATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLDKVCEFMPTG*TLFTGGWTSSK Trigger: TTTTGATGACGTCCATCCACCTGTGAAAAGGGTCAAACCAGTCGGCATAAATTCACATACCTTATCAAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| 3UTR CAA 72 bp | TACATATTAGAAAAAGAAAGTATCCTACTTAAGTGTTaGGGACATAAGTCCAGACGAACATCCTGTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YILEKESILLKC*GHKSRRTSCCQ Trigger: CTGACAACAGGATGTTCGTCTGGACTTATGTCCCAAACACTTAAGTAGGATACTTTCTTTTTCTAATATGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | TCACAGGTGGATGGACGTCATCAAAAGGGCCAGCAGCTCACCAGGGAGACCCCCGGTGGAGATCAGAGTTaGGCGGCTCCCCCTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQVDGRHQKGQQLTRETPGGDQS*AAPPWP Trigger: TGGCCAAGGGGGAGCCGCCAAACTCTGATCTCCACC...GGGGGTCTCCCTGGTGAGCTGCTGGCCCTTTTGATGACGTCCATCCACCTGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS CCA 90 bp | AGCAGTTCCCTTGTGCAGCTTGCTATGTGGACTTGGCCGGATGGTTaGAGGAAACGTCCAGATGGGACCCTGCTCCCCATCCTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSLVQLAMWTWPDG*RKRPDGTLLPILSL Trigger: GAGGCTGAGGATGGGGAGCAGGGTCCCATCTGGACGTTTCCTCCAACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS CCA 90 bp | GCAGAGCAGTTCCCTTGTGCAGCTTGCTATGTGGACTTGGCCGGATaGTTGGAGGAAACGTCCAGATGGGACCCTGCTCCCCATCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AEQFPCAACYVDLAG*LEETSRWDPAPHPQ Trigger: CTGAGGATGGGGAGCAGGGTCCCATCTGGACGTTTCCTCCAACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS GCA 90 bp | TTCTCTAGCTCCTCCAGGGCACCCACGCTCCCACCGCTCTGCTTGTaGTTCTCTTTGAGCTCTCCAAAGACAGGACGGACTAGTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSSSSRAPTLPPLCL*FSLSSPKTGRTSVD Trigger: GTCCACACTAGTCCGTCCTGTCTTTGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGTGGGAGCGTGGGTGCCCTGGAGGAGCTAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | GCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTCCAGATGGCCACCACTTCCTaGGTGTGGTTGTCGATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AHQGDPQVSLRTAHITLQMATTS*VWLSIP Trigger: GGGGATCGACAACCACACCAAGGAAGTGGTGGCCAT...CTGGAGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS GCA 90 bp | TGTGGACTTGGCCGGATGGTTGGAGGAAACGTCCAGATGGGACCCTaGTCCCCATCCTCAGCCTCGCCATCAATGTCAGAATCCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CGLGRMVGGNVQMGP*SPSSASPSMSESSE Trigger: TTCTGAGGATTCTGACATTGATGGCGAGGCTGAGGATGGGGAGCAGGGTCCCATCTGGACGTTTCCTCCAACCATCCGGCCAAGTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS GCA 90 bp | CTGCAGGCTTCTGTGAGCTGTGCAGAGCAGTTCCCTTGTGCAGCTTaGTATGTGGACTTGGCCGGATGGTTGGAGGAAACGTCCAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: LQASVSCAEQFPCAA*YVDLAGWLEETSRW Trigger: CCATCTGGACGTTTCCTCCAACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCTGCACAGCTCACAGAAGCCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS GCA 90 bp | GACCTTGGCTGTCTCTTGATAGGCTCTGCAGGCTTCTGTGAGCTGTaGAGAGCAGTTCCCTTGTGCAGCTTGCTATGTGGACTTGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DLGCLLIGSAGFCEL*RAVPLCSLLCGLGR Trigger: CCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCTGCACAGCTCACAGAAGCCTGCAGAGCCTATCAAGAGACAGCCAAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS GCA 90 bp | AAGGCATTCTCTAGCTCCTCCAGGGCACCCACGCTCCCACCGCTCTaGTTGTGCTTCTCTTTGAGCTCTCCAAAGACAGGACGGACTAGT | + |
|
Preference number: 5 (lower is better) Translates to: KAFSSSSRAPTLPPL*LCFSLSSPKTGRTS Trigger: ACTAGTCCGTCCTGTCTTTGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGTGGGAGCGTGGGTGCCCTGGAGGAGCTAGAGAATGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | AGCAGCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTGTTCCCTTGTGCAGCTaGCTATGTGGACTTGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSPGRPPSFTQDCSHHSVPLCS*LCGLGR Trigger: CCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAAC...AGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | GCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTCCAGCTCCCACCGCTCTGCTaGTGCTTCTCTTTGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AHQGDPQVSLRTAHITLQLPPLC*CFSLSS Trigger: AGAGCTCAAAGAGAAGCACAAGCAGAGCGGTGGGAG...CTGGAGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS GCA 90 bp | ATAGGCTCTGCAGGCTTCTGTGAGCTGTGCAGAGCAGTTCCCTTGTaGAGCTTGCTATGTGGACTTGGCCGGATGGTTGGAGGAAACGTC | + |
|
Preference number: 5 (lower is better) Translates to: IGSAGFCELCRAVPL*SLLCGLGRMVGGNV Trigger: GACGTTTCCTCCAACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCTGCACAGCTCACAGAAGCCTGCAGAGCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | ATGCCCTTCACCCTGCTTGGACAAGAACCTCTGACAGAGGCTTGCAGGGACTGTCCAATGCGGTCAAGCTaGGTGAAGAGTTCCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MPFTLLGQEPLTEACRDCPMRSS*VKSSSG Trigger: CCCAGAGGAACTCTTCACCAAGCTTGACCGCATTGG...ACAGTCCCTGCAAGCCTCTGTCAGAGGTTCTTGTCCAAGCAGGGTGAAGGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | TGTGTTGACTTGCAGGATGACTACCCCCTGGCCAGCCTCCCACTATTGGGTTACGCTTGCTATGTGGACTaGGCCGGATGGTTGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CVDLQDDYPLASLPLLGYACYVD*AGWLEE Trigger: TTCCTCCAACCATCCGGCCAAGTCCACATAGCAAGC...GTAACCCAATAGTGGGAGGCTGGCCAGGGGGTAGTCATCCTGCAAGTCAACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | TGTGTTGACTTGCAGGATGACTACCCCCTGGCCAGCCTCCCACTATTGGGTTACAGGTGCACCATCAGCTaGTCTGAGATGCCAGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: CVDLQDDYPLASLPLLGYRCTIS*SEMPGQ Trigger: CTGTCCTGGCATCTCAGACAAGCTGATGGTGCACCT...GTAACCCAATAGTGGGAGGCTGGCCAGGGGGTAGTCATCCTGCAAGTCAACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | GCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTCCAGAGCACGTTGGCAGCTTaGATATCTCGGTGGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AHQGDPQVSLRTAHITLQSTLAA*ISRWIL Trigger: CAAGATCCACCGAGATATCAAAGCTGCCAACGTGCT...CTGGAGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | GAGGGGTTCTGCTGCCCCCAACCTCCAGAAACAATGAAGACTCATGATGGCTGGAACTCCTTGAAGGGTTaGCTGTGGTGGCCCTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: EGFCCPQPPETMKTHDGWNSLKG*LWWPSN Trigger: ATTGGAGGGCCACCACAGCAAACCCTTCAAGGAGTT...CCAGCCATCATGAGTCTTCATTGTTTCTGGAGGTTGGGGGCAGCAGAACCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS TCA 90 bp | CACTTCCTTGGTGTGGTTGTCGATCCCCTTGTACACCTCCCCAAATaGGCCTTTGCCAATGCGGTCAAGCTTGGTGAAGAGTTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HFLGVVVDPLVHLPK*AFANAVKLGEEFLW Trigger: CCAGAGGAACTCTTCACCAAGCTTGACCGCATTGGCAAAGGCTCATTTGGGGAGGTGTACAAGGGGATCGACAACCACACCAAGGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027498.14 ENSMUST00000133769.8 ENSMUST00000186287.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTTGACTTGCAGGATGACTACCCCCTGGCCAGCCTCCCACTATTGGGTTACTCCAATGTGGGTGGGTaGTTCTTGGGAATCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CVDLQDDYPLASLPLLGYSNVGG*FLGIRN Trigger: GTTCCTGATTCCCAAGAACAACCCACCCACATTGGA...GTAACCCAATAGTGGGAGGCTGGCCAGGGGGTAGTCATCCTGCAAGTCAACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS CCA 90 bp | GCTCTGAGTGCAGATAATCCAGGCCTTTCAGGATCTCCCGCAAGATaGTGGCAATATAGGTCTCTTCCAGGGGACCAGGTTTCAGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALSADNPGLSGSPAR*WQYRSLPGDQVSAS Trigger: ACTTGCTGAAACCTGGTCCCCTGGAAGAGACCTATATTGCCACCATCTTGCGGGAGATCCTGAAAGGCCTGGATTATCTGCACTCAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027498.14 ENSMUST00000133769.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTAGCTGCTGAAGCCTTGCACTGGAACAATCTGCCTTGTTTTAGGAGACAGGACTTGGCCGGATGGTaGGAGGAAACGTCCAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: VLAAEALHWNNLPCFRRQDLAGW*EETSRW Trigger: CCATCTGGACGTTTCCTCCAACCATCCGGCCAAGTC...CTGTCTCCTAAAACAAGGCAGATTGTTCCAGTGCAAGGCTTCAGCAGCTAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS GCA 90 bp | GCCTCGCCATCAATGTCAGAATCCTCAGAACTGGACTCCTCTCCATaGCCCTCAGACTTCCAGCGCTTATATCGGTCAATAAGTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASPSMSESSELDSSP*PSDFQRLYRSISSV Trigger: CACTGAACTTATTGACCGATATAAGCGCTGGAAGTCTGAGGGGCATGGAGAGGAGTCCAGTTCTGAGGATTCTGACATTGATGGCGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | ATGCCCTTCACCCTGCTTGGACAAGAACCTCTGACAGAGGCTTGCAGGGACTGTCACAGTGATCTCCTGTaGGATGTCCTCAATTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: MPFTLLGQEPLTEACRDCHSDLL*DVLNFI Trigger: GATGAAATTGAGGACATCCAACAGGAGATCACTGTG...ACAGTCCCTGCAAGCCTCTGTCAGAGGTTCTTGTCCAAGCAGGGTGAAGGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | TATGCCGACTGGTTTGACCCTTTTCACAGGTGGATGGACGTCATCAAAAGGGCCTGTGTTCCTCTTGATTaGTGTGTCTGTGAGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YADWFDPFHRWMDVIKRACVPLD*CVCELP Trigger: GGGCAGCTCACAGACACACAAATCAAGAGGAACACA...GGCCCTTTTGATGACGTCCATCCACCTGTGAAAAGGGTCAAACCAGTCGGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | GCTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTCCAGACAAATGTGTTCCTCTaGATTTGTGTGTCTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AHQGDPQVSLRTAHITLQTNVFL*ICVSVS Trigger: GCTCACAGACACACAAATCAAGAGGAACACATTTGT...CTGGAGAGTGATGTGAGCAGTCCTGAGTGAAACTTGGGGGTCTCCCTGGTGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | GTCCCTCTGTACAAACTACCACTTTCTTGGGAGAGTCAGTGGTACAAAGTGAAGTCCGAGAGCAGCACGTaGGCAGCTTTGATATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VPLYKLPLSWESQWYKVKSESST*AALISR Trigger: CCGAGATATCAAAGCTGCCAACGTGCTGCTCTCGGA...CTTCACTTTGTACCACTGACTCTCCCAAGAAAGTGGTAGTTTGTACAGAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | TTAGGCACTCTTGATAAGGTATGTGAATTTATGCCGACTGGTTTGACCCTTTTCTTTGGCGGCTCCCCCTaGGCCAGCTCAATGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGTLDKVCEFMPTGLTLFFGGSP*ASSMAV Trigger: CACAGCCATTGAGCTGGCCAAGGGGGAGCCGCCAAA...GAAAAGGGTCAAACCAGTCGGCATAAATTCACATACCTTATCAAGAGTGCCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | AGAGGGCTTCCAAGTCAGTCCTTTTACAGCTCAAAACAAACAGCATTCTTCTCCTGCTTCAGGAGCTCCTaGGCAGTGGGTCGGAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: RGLPSQSFYSSKQTAFFSCFRSS*AVGRNR Trigger: ACGATTCCGACCCACTGCCAAGGAGCTCCTGAAGCA...GGAGAAGAATGCTGTTTGTTTTGAGCTGTAAAAGGACTGACTTGGAAGCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | ATGCCCTTCACCCTGCTTGGACAAGAACCTCTGACAGAGGCTTGCAGGGACTGTAGAAAGGAGGTCTTCTaGGTGTATCGTGTGATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: MPFTLLGQEPLTEACRDCRKEVF*VYRVMN Trigger: ATTCATCACACGATACACCAAGAAGACCTCCTTTCT...ACAGTCCCTGCAAGCCTCTGTCAGAGGTTCTTGTCCAAGCAGGGTGAAGGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | GTGTTAGCTGCTGAAGCCTTGCACTGGAACAATCTGCCTTGTTTTAGGAGACAGATAAGGACTGTCACATaGGCTGAGCACAGTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLAAEALHWNNLPCFRRQIRTVT*AEHSDL Trigger: GAGATCACTGTGCTCAGCCAATGTGACAGTCCTTAT...CTGTCTCCTAAAACAAGGCAGATTGTTCCAGTGCAAGGCTTCAGCAGCTAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | AGAGGGCTTCCAAGTCAGTCCTTTTACAGCTCAAAACAAACAGCATTCTTCTCCAATCGTGGGTCCTTATaGAGGCAGGCCTCTACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RGLPSQSFYSSKQTAFFSNRGSL*RQASTN Trigger: GTTTGTAGAGGCCTGCCTCAATAAGGACCCACGATT...GGAGAAGAATGCTGTTTGTTTTGAGCTGTAAAAGGACTGACTTGGAAGCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | GTGTTAGCTGCTGAAGCCTTGCACTGGAACAATCTGCCTTGTTTTAGGAGACAGTATCGTGTGATGAATTaGTGCTTCAGGAGCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLAAEALHWNNLPCFRRQYRVMN*CFRSSL Trigger: CAAGGAGCTCCTGAAGCACAAATTCATCACACGATA...CTGTCTCCTAAAACAAGGCAGATTGTTCCAGTGCAAGGCTTCAGCAGCTAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | TTAGGCACTCTTGATAAGGTATGTGAATTTATGCCGACTGGTTTGACCCTTTTCTGGTTGTCGATCCCCTaGTACACCTCCCCAAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGTLDKVCEFMPTGLTLFWLSIP*YTSPNE Trigger: CTCATTTGGGGAGGTGTACAAGGGGATCGACAACCA...GAAAAGGGTCAAACCAGTCGGCATAAATTCACATACCTTATCAAGAGTGCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS-3UTR CAA 90 bp | AGAGGGCTTCCAAGTCAGTCCTTTTACAGCTCAAAACAAACAGCATTCTTCTCCTCCAAGTCAATGATCTaGATGGCCACCACTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGLPSQSFYSSKQTAFFSSKSMI*MATTSL Trigger: CAAGGAAGTGGTGGCCATCAAGATCATTGACTTGGA...GGAGAAGAATGCTGTTTGTTTTGAGCTGTAAAAGGACTGACTTGGAAGCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS CAA 72 bp | AGCTCCTCCAGGGCACCCACGCTCCCACCGCTCTGCTaGTGCTTCTCTTTGAGCTCTCCAAAGACAGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSRAPTLPPLC*CFSLSSPKTGR Trigger: CCGTCCTGTCTTTGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGTGGGAGCGTGGGTGCCCTGGAGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS GCA 72 bp | GGCCGGATGGTTGGAGGAAACGTCCAGATGGGACCCTaGTCCCCATCCTCAGCCTCGCCATCAATGTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GRMVGGNVQMGP*SPSSASPSMSE Trigger: TTCTGACATTGATGGCGAGGCTGAGGATGGGGAGCAGGGTCCCATCTGGACGTTTCCTCCAACCATCCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS CAA 90 bp | GTGAGCTGTGCAGAGCAGTTCCCTTGTGCAGCTTGCTATGTGGACTaGGCCGGATGGTTGGAGGAAACGTCCAGATGGGACCCTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VSCAEQFPCAACYVD*AGWLEETSRWDPAP Trigger: GGGAGCAGGGTCCCATCTGGACGTTTCCTCCAACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCTGCACAGCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS CAA 90 bp | TCCTCCAGGGCACCCACGCTCCCACCGCTCTGCTTGTGCTTCTCTTaGAGCTCTCCAAAGACAGGACGGACTAGTGTGGACAAGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSRAPTLPPLCLCFS*SSPKTGRTSVDKHW Trigger: CCAGTGCTTGTCCACACTAGTCCGTCCTGTCTTTGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGTGGGAGCGTGGGTGCCCTGGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS CAA 90 bp | GCATTCTCTAGCTCCTCCAGGGCACCCACGCTCCCACCGCTCTGCTaGTGCTTCTCTTTGAGCTCTCCAAAGACAGGACGGACTAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AFSSSSRAPTLPPLC*CFSLSSPKTGRTSV Trigger: CACACTAGTCCGTCCTGTCTTTGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGTGGGAGCGTGGGTGCCCTGGAGGAGCTAGAGAATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS TCA 72 bp | CTGCACACGCTCCACCAGGTGCACCATCAGCTTGTCTaGGATGCCAGGACAGGATTCCTCAGCCAGGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LHTLHQVHHQLV*DARTGFLSQAE Trigger: TTCAGCCTGGCTGAGGAATCCTGTCCTGGCATCTCAGACAAGCTGATGGTGCACCTGGTGGAGCGTGTGCAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
||
| CDS CCA 72 bp | TTTGCCAATGCGGTCAAGCTTGGTGAAGAGTTCCTCTaGGTCCACACGAGAATGCTGGTGCGCGAAGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: FANAVKLGEEFL*VHTRMLVREAP Trigger: CGGGGCTTCGCGCACCAGCATTCTCGTGTGGACCCAGAGGAACTCTTCACCAAGCTTGACCGCATTGGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027498.14 ENSMUST00000133769.8 ENSMUST00000186287.3 |
||
| CDS CCA 72 bp | CAGGAACAGGACTCGCATAGGGTGGAGATCAGAGTTTaGCGGCTCCCCCTTGGCCAGCTCAATGGCTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: QEQDSHRVEIRV*RLPLGQLNGCD Trigger: ATCACAGCCATTGAGCTGGCCAAGGGGGAGCCGCCAAACTCTGATCTCCACCCTATGCGAGTCCTGTTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027498.14 ENSMUST00000133769.8 |
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| CDS CCA 72 bp | TTCCCTTGTGCAGCTTGCTATGTGGACTTGGCCGGATaGTTGGAGGAAACGTCCAGATGGGACCCTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: FPCAACYVDLAG*LEETSRWDPAP Trigger: GGGAGCAGGGTCCCATCTGGACGTTTCCTCCAACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS CAA 90 bp | ACAGGACGGACTAGTGTGGACAAGCACTGGGACCTTGGCTGTCTCTaGATAGGCTCTGCAGGCTTCTGTGAGCTGTGCAGAGCAGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: TGRTSVDKHWDLGCL*IGSAGFCELCRAVP Trigger: GGGAACTGCTCTGCACAGCTCACAGAAGCCTGCAGAGCCTATCAAGAGACAGCCAAGGTCCCAGTGCTTGTCCACACTAGTCCGTCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS GCA 72 bp | GCAGGCTTCTGTGAGCTGTGCAGAGCAGTTCCCTTGTaGAGCTTGCTATGTGGACTTGGCCGGATGGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: AGFCELCRAVPL*SLLCGLGRMVG Trigger: TCCAACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCTGCACAGCTCACAGAAGCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS CCA 72 bp | TTGTTCTTGGGAATCAGGAACAGGACTCGCATAGGGTaGAGATCAGAGTTTGGCGGCTCCCCCTTGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LFLGIRNRTRIG*RSEFGGSPLAS Trigger: GCTGGCCAAGGGGGAGCCGCCAAACTCTGATCTCCACCCTATGCGAGTCCTGTTCCTGATTCCCAAGAACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027498.14 ENSMUST00000133769.8 |
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| CDS CCA 72 bp | CAGAGCAGTTCCCTTGTGCAGCTTGCTATGTGGACTTaGCCGGATGGTTGGAGGAAACGTCCAGATGGGACC | + |
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Preference number: 6 (lower is better) Translates to: QSSSLVQLAMWT*PDGWRKRPDGT Trigger: GGTCCCATCTGGACGTTTCCTCCAACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS CAA 72 bp | GCAGAGCAGTTCCCTTGTGCAGCTTGCTATGTGGACTaGGCCGGATGGTTGGAGGAAACGTCCAGATGGGAC | + |
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Preference number: 6 (lower is better) Translates to: AEQFPCAACYVD*AGWLEETSRWD Trigger: GTCCCATCTGGACGTTTCCTCCAACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS CAA 90 bp | TCTGCAGGCTTCTGTGAGCTGTGCAGAGCAGTTCCCTTGTGCAGCTaGCTATGTGGACTTGGCCGGATGGTTGGAGGAAACGTCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: SAGFCELCRAVPLCS*LCGLGRMVGGNVQM Trigger: CATCTGGACGTTTCCTCCAACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCTGCACAGCTCACAGAAGCCTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS CCA 72 bp | GCTGTGCAGAGCAGTTCCCTTGTGCAGCTTGCTATGTaGACTTGGCCGGATGGTTGGAGGAAACGTCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: AVQSSSLVQLAM*TWPDGWRKRPD Trigger: ATCTGGACGTTTCCTCCAACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCTGCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS CCA 72 bp | TCTCCAAAGACAGGACGGACTAGTGTGGACAAGCACTaGGACCTTGGCTGTCTCTTGATAGGCTCTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SPKTGRTSVDKH*DLGCLLIGSAG Trigger: GCCTGCAGAGCCTATCAAGAGACAGCCAAGGTCCCAGTGCTTGTCCACACTAGTCCGTCCTGTCTTTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS CAA 72 bp | TCTGCAGGCTTCTGTGAGCTGTGCAGAGCAGTTCCCTaGTGCAGCTTGCTATGTGGACTTGGCCGGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: SAGFCELCRAVP*CSLLCGLGRMV Trigger: AACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCTGCACAGCTCACAGAAGCCTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS CAA 90 bp | TTGATAGGCTCTGCAGGCTTCTGTGAGCTGTGCAGAGCAGTTCCCTaGTGCAGCTTGCTATGTGGACTTGGCCGGATGGTTGGAGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: LIGSAGFCELCRAVP*CSLLCGLGRMVGGN Trigger: GTTTCCTCCAACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCTGCACAGCTCACAGAAGCCTGCAGAGCCTATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS TCA 72 bp | GGTGTGGTTGTCGATCCCCTTGTACACCTCCCCAAATaGGCCTTTGCCAATGCGGTCAAGCTTGGTGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: GVVVDPLVHLPK*AFANAVKLGEE Trigger: CTCTTCACCAAGCTTGACCGCATTGGCAAAGGCTCATTTGGGGAGGTGTACAAGGGGATCGACAACCACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027498.14 ENSMUST00000133769.8 ENSMUST00000186287.3 |
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| CDS CCA 72 bp | CTTGAAGGGTTTGCTGTGGTGGCCCTCCAATGTGGGTaGGTTGTTCTTGGGAATCAGGAACAGGACTCGCAT | + |
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Preference number: 6 (lower is better) Translates to: LEGFAVVALQCG*VVLGNQEQDSH Trigger: ATGCGAGTCCTGTTCCTGATTCCCAAGAACAACCCACCCACATTGGAGGGCCACCACAGCAAACCCTTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS CAA 90 bp | AACTCCTTGAAGGGTTTGCTGTGGTGGCCCTCCAATGTGGGTGGGTaGTTCTTGGGAATCAGGAACAGGACTCGCATAGGGTGGAGATCA | + |
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Preference number: 6 (lower is better) Translates to: NSLKGLLWWPSNVGG*FLGIRNRTRIGWRS Trigger: TGATCTCCACCCTATGCGAGTCCTGTTCCTGATTCCCAAGAACAACCCACCCACATTGGAGGGCCACCACAGCAAACCCTTCAAGGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS TCA 72 bp | GTTGGCAGCTTTGATATCTCGGTGGATCTTGCGCTCTaGGTGCAGATAATCCAGGCCTTTCAGGATCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: VGSFDISVDLAL*VQIIQAFQDLP Trigger: CGGGAGATCCTGAAAGGCCTGGATTATCTGCACTCAGAGCGCAAGATCCACCGAGATATCAAAGCTGCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027498.14 ENSMUST00000133769.8 |
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| CDS CCA 72 bp | GCAGATAATCCAGGCCTTTCAGGATCTCCCGCAAGATaGTGGCAATATAGGTCTCTTCCAGGGGACCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: ADNPGLSGSPAR*WQYRSLPGDQV Trigger: AACCTGGTCCCCTGGAAGAGACCTATATTGCCACCATCTTGCGGGAGATCCTGAAAGGCCTGGATTATCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027498.14 ENSMUST00000133769.8 |
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| CDS CCA 72 bp | GATAATCCAGGCCTTTCAGGATCTCCCGCAAGATGGTaGCAATATAGGTCTCTTCCAGGGGACCAGGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: DNPGLSGSPARW*QYRSLPGDQVS Trigger: TGAAACCTGGTCCCCTGGAAGAGACCTATATTGCCACCATCTTGCGGGAGATCCTGAAAGGCCTGGATTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027498.14 ENSMUST00000133769.8 |
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| CDS CAA 72 bp | GTGTATCGTGTGATGAATTTGTGCTTCAGGAGCTCCTaGGCAGTGGGTCGGAATCGTGGGTCCTTATTGAGG | + |
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Preference number: 6 (lower is better) Translates to: VYRVMNLCFRSS*AVGRNRGSLLR Trigger: CCTCAATAAGGACCCACGATTCCGACCCACTGCCAAGGAGCTCCTGAAGCACAAATTCATCACACGATACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS GCA 72 bp | TCAATGTCAGAATCCTCAGAACTGGACTCCTCTCCATaGCCCTCAGACTTCCAGCGCTTATATCGGTCAATA | + |
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Preference number: 6 (lower is better) Translates to: SMSESSELDSSP*PSDFQRLYRSI Trigger: TATTGACCGATATAAGCGCTGGAAGTCTGAGGGGCATGGAGAGGAGTCCAGTTCTGAGGATTCTGACATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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| CDS CAA 72 bp | AGAAAGGAGGTCTTCTTGGTGTATCGTGTGATGAATTaGTGCTTCAGGAGCTCCTTGGCAGTGGGTCGGAAT | + |
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Preference number: 6 (lower is better) Translates to: RKEVFLVYRVMN*CFRSSLAVGRN Trigger: ATTCCGACCCACTGCCAAGGAGCTCCTGAAGCACAAATTCATCACACGATACACCAAGAAGACCTCCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027498.14 |
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