Pregenerated sensors for STK24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063410Ensembl transcript IDs: ENSMUST00000079817.8
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATCGGGAAAGACTCCATCTGGCTGTGGCACGACGAGGCCGTCCCTaGACAGGTGCCGGCGCTATGGGAGGGCGGGTGGGCCCCTCCGTG | + |
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Preference number: 1 (lower is better) Translates to: YRERLHLAVARRGRP*TGAGAMGGRVGPSV Trigger: CACGGAGGGGCCCACCCGCCCTCCCATAGCGCCGGCACCTGTCCAGGGACGGCCTCGTCGTGCCACAGCCAGATGGAGTCTTTCCCGATA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| 3UTR CCA 90 bp | GAGAAGACCCTCCCCCACCCTATCGGGAAAGACTCCATCTGGCTGTaGCACGACGAGGCCGTCCCTGGACAGGTGCCGGCGCTATGGGAG | + |
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Preference number: 1 (lower is better) Translates to: EKTLPHPIGKDSIWL*HDEAVPGQVPALWE Trigger: CTCCCATAGCGCCGGCACCTGTCCAGGGACGGCCTCGTCGTGCCACAGCCAGATGGAGTCTTTCCCGATAGGGTGGGGGAGGGTCTTCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| 3UTR CCA 90 bp | TTGAAGGAGAAGACCCTCCCCCACCCTATCGGGAAAGACTCCATCTaGCTGTGGCACGACGAGGCCGTCCCTGGACAGGTGCCGGCGCTA | + |
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Preference number: 1 (lower is better) Translates to: LKEKTLPHPIGKDSI*LWHDEAVPGQVPAL Trigger: TAGCGCCGGCACCTGTCCAGGGACGGCCTCGTCGTGCCACAGCCAGATGGAGTCTTTCCCGATAGGGTGGGGGAGGGTCTTCTCCTTCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCCATCTGGCTGTGGCACGACGAGGCCGTCCCTGGACAGGTGCCGGCGCTAGGCAAAGGCTCTCGTTaGCTTTTAAAAAGAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: DSIWLWHDEAVPGQVPALGKGSR*LLKRRK Trigger: CTTCCTTCTTTTTAAAAGTCAACGAGAGCCTTTGCC...TAGCGCCGGCACCTGTCCAGGGACGGCCTCGTCGTGCCACAGCCAGATGGAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| 3UTR CCA 72 bp | AGACTCCATCTGGCTGTGGCACGACGAGGCCGTCCCTaGACAGGTGCCGGCGCTATGGGAGGGCGGGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: RLHLAVARRGRP*TGAGAMGGRVG Trigger: GCCCACCCGCCCTCCCATAGCGCCGGCACCTGTCCAGGGACGGCCTCGTCGTGCCACAGCCAGATGGAGTCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| 3UTR TCA 72 bp | GTGCCGGCGCTATGGGAGGGCGGGTGGGCCCCTCCGTaGCACCTCTTCGCAGAGTCGGCAAAGGCTCTCGTT | + |
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Preference number: 3 (lower is better) Translates to: VPALWEGGWAPP*HLFAESAKALV Trigger: AACGAGAGCCTTTGCCGACTCTGCGAAGAGGTGTCACGGAGGGGCCCACCCGCCCTCCCATAGCGCCGGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| 3UTR CCA 72 bp | CTCCCCCACCCTATCGGGAAAGACTCCATCTGGCTGTaGCACGACGAGGCCGTCCCTGGACAGGTGCCGGCG | + |
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Preference number: 3 (lower is better) Translates to: LPHPIGKDSIWL*HDEAVPGQVPA Trigger: CGCCGGCACCTGTCCAGGGACGGCCTCGTCGTGCCACAGCCAGATGGAGTCTTTCCCGATAGGGTGGGGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| 3UTR CCA 72 bp | AAGACCCTCCCCCACCCTATCGGGAAAGACTCCATCTaGCTGTGGCACGACGAGGCCGTCCCTGGACAGGTG | + |
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Preference number: 3 (lower is better) Translates to: KTLPHPIGKDSI*LWHDEAVPGQV Trigger: CACCTGTCCAGGGACGGCCTCGTCGTGCCACAGCCAGATGGAGTCTTTCCCGATAGGGTGGGGGAGGGTCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| 3UTR CCA 72 bp | AAGTTGCACTACAAGATTCAATGGAAAGATGCCGGATaGGACATCTGGTACAGACGTGGTGGCACAACCCAA | + |
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Preference number: 3 (lower is better) Translates to: KLHYKIQWKDAG*DIWYRRGGTTQ Trigger: TTGGGTTGTGCCACCACGTCTGTACCAGATGTCCCATCCGGCATCTTTCCATTGAATCTTGTAGTGCAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| 3UTR CCA 72 bp | GAGAAGATGATACGCAAGTTGCACTACAAGATTCAATaGAAAGATGCCGGATGGGACATCTGGTACAGACGT | + |
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Preference number: 3 (lower is better) Translates to: EKMIRKLHYKIQ*KDAGWDIWYRR Trigger: ACGTCTGTACCAGATGTCCCATCCGGCATCTTTCCATTGAATCTTGTAGTGCAACTTGCGTATCATCTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR TCA 90 bp | GGCACGACGAGGCCGTCCCTGGACAGGTGCCGGCGCTATGGGAGGGCGGGTGGGTGCCACCATAGTGTCTaGGATCCCAGGGCAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: GTTRPSLDRCRRYGRAGGCHHSV*DPRAGL Trigger: GAGGCCTGCCCTGGGATCTCAGACACTATGGTGGCA...CCCACCCGCCCTCCCATAGCGCCGGCACCTGTCCAGGGACGGCCTCGTCGTGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR GCA 90 bp | GGCACGACGAGGCCGTCCCTGGACAGGTGCCGGCGCTATGGGAGGGCGGGTGGGAACACCTTCATGGGGTaGAGCTCAGAATGTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GTTRPSLDRCRRYGRAGGNTFMG*SSECGG Trigger: GCCACCACATTCTGAGCTGCACCCCATGAAGGTGTT...CCCACCCGCCCTCCCATAGCGCCGGCACCTGTCCAGGGACGGCCTCGTCGTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR GCA 90 bp | GACTCCATCTGGCTGTGGCACGACGAGGCCGTCCCTGGACAGGTGCCGGCGCTAAGTCCCCAGAGTCGCTaGCTCCAGACGCCTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: DSIWLWHDEAVPGQVPALSPQSR*LQTPGH Trigger: ATGGCCAGGCGTCTGGAGGCAGCGACTCTGGGGACT...TAGCGCCGGCACCTGTCCAGGGACGGCCTCGTCGTGCCACAGCCAGATGGAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR TCA 90 bp | GGCACGACGAGGCCGTCCCTGGACAGGTGCCGGCGCTATGGGAGGGCGGGTGGGACTGGCTCAGCACTGTaGTCTCTTGTTGGATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GTTRPSLDRCRRYGRAGGTGSAL*SLVGCP Trigger: AGGACATCCAACAAGAGATCACAGTGCTGAGCCAGT...CCCACCCGCCCTCCCATAGCGCCGGCACCTGTCCAGGGACGGCCTCGTCGTGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR GCA 90 bp | ACGAGGCCGTCCCTGGACAGGTGCCGGCGCTATGGGAGGGCGGGTGGGCCCCTCAAGCTCTTCTGGGTCTaGTTTCAGGTTCTGCATGCC | + |
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Preference number: 4 (lower is better) Translates to: TRPSLDRCRRYGRAGGPLKLFWV*FQVLHA Trigger: GGCATGCAGAACCTGAAAGCAGACCCAGAAGAGCTT...GAGGGGCCCACCCGCCCTCCCATAGCGCCGGCACCTGTCCAGGGACGGCCTCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR CCA 90 bp | GACTCCATCTGGCTGTGGCACGACGAGGCCGTCCCTGGACAGGTGCCGGCGCTACTTCCGCCAAGTAGATaGCTCCCCGCAGCTCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: DSIWLWHDEAVPGQVPALLPPSR*LPAALL Trigger: TAGAAGAGCTGCGGGGAGCCATCTACTTGGCGGAAG...TAGCGCCGGCACCTGTCCAGGGACGGCCTCGTCGTGCCACAGCCAGATGGAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR GCA 90 bp | ATCGGGAAAGACTCCATCTGGCTGTGGCACGACGAGGCCGTCCCTGGACAGGTGCTTTCAGGTTCTGCATaGCCGGCAGGCCCGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: IGKDSIWLWHDEAVPGQVLSGSA*PAGPTA Trigger: TGCAGTCGGGCCTGCCGGGCATGCAGAACCTGAAAG...CACCTGTCCAGGGACGGCCTCGTCGTGCCACAGCCAGATGGAGTCTTTCCCGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR GCA 90 bp | CGACTCTCTGTCTCCCGGGGGAGGAGCTATCGATATAAAGCGGGATACCTGAGGTCTGCTTTCAGGTTCTaGATGCCCGGCAGGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: RLSVSRGRSYRYKAGYLRSAFRF*MPGRPD Trigger: GTCGGGCCTGCCGGGCATGCAGAACCTGAAAGCAGA...CCTCAGGTATCCCGCTTTATATCGATAGCTCCTCCCCCGGGAGACAGAGAGTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR GCA 90 bp | ATCGGGAAAGACTCCATCTGGCTGTGGCACGACGAGGCCGTCCCTGGACAGGTGCTCAGAGAATATCTCTaGAGCCGCTGCACAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: IGKDSIWLWHDEAVPGQVLREYL*SRCTSC Trigger: ACAGCTTGTGCAGCGGCTGCAGAGATATTCTCTGAG...CACCTGTCCAGGGACGGCCTCGTCGTGCCACAGCCAGATGGAGTCTTTCCCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR TCA 90 bp | GTCTCCCGGGGGAGGAGCTATCGATATAAAGCGGGATACCTGAGGTTGCGTGTCCCTCCACGAACTCCTTaGGGGGTTTGCTGTAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: VSRGRSYRYKAGYLRLRVPPRTP*GVCCSS Trigger: GGAACTACAGCAAACCCCTCAAGGAGTTCGTGGAGG...GACACGCAACCTCAGGTATCCCGCTTTATATCGATAGCTCCTCCCCCGGGAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR CCA 90 bp | TGCTTGAAGGAGAAGACCCTCCCCCACCCTATCGGGAAAGACTCCATCTGGCTGCAGCTCAGAATGTGGTaGCTCTCCTTTGGCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: CLKEKTLPHPIGKDSIWLQLRMW*LSFGQF Trigger: GAACTGGCCAAAGGAGAGCCACCACATTCTGAGCTG...CAGCCAGATGGAGTCTTTCCCGATAGGGTGGGGGAGGGTCTTCTCCTTCAAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR CCA 90 bp | TGCTTGAAGGAGAAGACCCTCCCCCACCCTATCGGGAAAGACTCCATCTGGCTGGGAATAACACCTTCATaGGGTGCAGCTCAGAATGTG | + |
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Preference number: 4 (lower is better) Translates to: CLKEKTLPHPIGKDSIWLGITPS*GAAQNV Trigger: CACATTCTGAGCTGCACCCCATGAAGGTGTTATTCC...CAGCCAGATGGAGTCTTTCCCGATAGGGTGGGGGAGGGTCTTCTCCTTCAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR CCA 90 bp | GTCTCCCGGGGGAGGAGCTATCGATATAAAGCGGGATACCTGAGGTTGCGTGTCGGTAAAAAGCTCTTCTaGGTCTGCTTTCAGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VSRGRSYRYKAGYLRLRVGKKLF*VCFQVL Trigger: CAGAACCTGAAAGCAGACCCAGAAGAGCTTTTTACC...GACACGCAACCTCAGGTATCCCGCTTTATATCGATAGCTCCTCCCCCGGGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR CCA 90 bp | AATAATTGCTTGAAGGAGAAGACCCTCCCCCACCCTATCGGGAAAGACTCCATCGTGCAGCTCAGAATGTaGTGGCTCTCCTTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: NNCLKEKTLPHPIGKDSIVQLRM*WLSFGQ Trigger: CTGGCCAAAGGAGAGCCACCACATTCTGAGCTGCAC...GATGGAGTCTTTCCCGATAGGGTGGGGGAGGGTCTTCTCCTTCAAGCAATTATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR TCA 90 bp | GTCTCCCGGGGGAGGAGCTATCGATATAAAGCGGGATACCTGAGGTTGCGTGTCGATTGTCAATGCCTTTaGACACTTCACCAAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VSRGRSYRYKAGYLRLRVDCQCL*TLHQKS Trigger: GCTCTTTTGGTGAAGTGTTCAAAGGCATTGACAATC...GACACGCAACCTCAGGTATCCCGCTTTATATCGATAGCTCCTCCCCCGGGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR TCA 90 bp | CGACTCTCTGTCTCCCGGGGGAGGAGCTATCGATATAAAGCGGGATACCTGAGGAATATGGTTGCAATCTaGATTTCATCTAAAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RLSVSRGRSYRYKAGYLRNMVAI*ISSKGP Trigger: TGGCCCTTTAGATGAAATTCAGATTGCAACCATATT...CCTCAGGTATCCCGCTTTATATCGATAGCTCCTCCCCCGGGAGACAGAGAGTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| 3UTR CAA 72 bp | GGGAGGAGCTATCGATATAAAGCGGGATACCTGAGGTaGCGTGTCTTCAATTGCCTTAAAACGATCCAAATA | + |
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Preference number: 4 (lower is better) Translates to: GRSYRYKAGYLR*RVFNCLKTIQI Trigger: TATTTGGATCGTTTTAAGGCAATTGAAGACACGCAACCTCAGGTATCCCGCTTTATATCGATAGCTCCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR CAA 90 bp | ACGAGGCCGTCCCTGGACAGGTGCCGGCGCTATGGGAGGGCGGGTGGGCCCCTCCTAAAGCTGGGCTCCTaGTTCAGGCAGGCCTCCACG | + |
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Preference number: 5 (lower is better) Translates to: TRPSLDRCRRYGRAGGPLLKLGS*FRQAST Trigger: CGTGGAGGCCTGCCTGAACAAGGAGCCCAGCTTTAG...GAGGGGCCCACCCGCCCTCCCATAGCGCCGGCACCTGTCCAGGGACGGCCTCGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR CAA 90 bp | ACGACGAGGCCGTCCCTGGACAGGTGCCGGCGCTATGGGAGGGCGGGTGGGCCCACGAAGGTGTTCCTTTaGATCTGGGTATCCGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: TTRPSLDRCRRYGRAGGPTKVFL*IWVSVS Trigger: GCTGACGGATACCCAGATCAAAAGGAACACCTTCGT...GGGCCCACCCGCCCTCCCATAGCGCCGGCACCTGTCCAGGGACGGCCTCGTCGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR CAA 90 bp | ACGACGAGGCCGTCCCTGGACAGGTGCCGGCGCTATGGGAGGGCGGGTGGGCCCTCAGAGAGCAGAACATaGGCCGCTTTAATATCTCTG | + |
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Preference number: 5 (lower is better) Translates to: TTRPSLDRCRRYGRAGGPSESRT*AALISL Trigger: CAGAGATATTAAAGCGGCCAATGTTCTGCTCTCTGA...GGGCCCACCCGCCCTCCCATAGCGCCGGCACCTGTCCAGGGACGGCCTCGTCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS GCA 90 bp | TGCGCTGAGGCTCCTCCGCCACTCAGAGAATATCTCTGCAGCCGCTaGACAAGCTGTGCCACCATAGTGTCTGAGATCCCAGGGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: CAEAPPPLREYLCSR*TSCATIVSEIPGQA Trigger: GGCCTGCCCTGGGATCTCAGACACTATGGTGGCACAGCTTGTGCAGCGGCTGCAGAGATATTCTCTGAGTGGCGGAGGAGCCTCAGCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR CAA 90 bp | ACGACGAGGCCGTCCCTGGACAGGTGCCGGCGCTATGGGAGGGCGGGTGGGCCCGACGTTTTCTTTGCATaGCGGATTATGAATTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: TTRPSLDRCRRYGRAGGPDVFFA*RIMNLC Trigger: GCACAAATTCATAATCCGCAATGCAAAGAAAACGTC...GGGCCCACCCGCCCTCCCATAGCGCCGGCACCTGTCCAGGGACGGCCTCGTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS TCA 90 bp | AGAATATCTCTGCAGCCGCTGCACAAGCTGTGCCACCATAGTGTCTaGGATCCCAGGGCAGGCCTCTTCCGCCAAGTAGATGGCTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: RISLQPLHKLCHHSV*DPRAGLFRQVDGSP Trigger: CGGGGAGCCATCTACTTGGCGGAAGAGGCCTGCCCTGGGATCTCAGACACTATGGTGGCACAGCTTGTGCAGCGGCTGCAGAGATATTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR CAA 90 bp | CGACTCTCTGTCTCCCGGGGGAGGAGCTATCGATATAAAGCGGGATACCTGAGGTGTGGTGGCTCTCCTTaGGCCAGTTCTATTGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: RLSVSRGRSYRYKAGYLRCGGSP*ASSIAV Trigger: CACCGCAATAGAACTGGCCAAAGGAGAGCCACCACA...CCTCAGGTATCCCGCTTTATATCGATAGCTCCTCCCCCGGGAGACAGAGAGTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS-3UTR CAA 90 bp | AGCTATCGATATAAAGCGGGATACCTGAGGTTGCGTGTCTTCAATTGCCTTAAAACCAGATGTCTGCCTTaGAGTCGTAGGCTGACTGCT | + |
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Preference number: 5 (lower is better) Translates to: SYRYKAGYLRLRVFNCLKTRCLP*SRRLTA Trigger: AGCAGTCAGCCTACGACTCAAAGGCAGACATCTGGT...TTTAAGGCAATTGAAGACACGCAACCTCAGGTATCCCGCTTTATATCGATAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS TCA 72 bp | CTGCAGCCGCTGCACAAGCTGTGCCACCATAGTGTCTaGGATCCCAGGGCAGGCCTCTTCCGCCAAGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: LQPLHKLCHHSV*DPRAGLFRQVD Trigger: ATCTACTTGGCGGAAGAGGCCTGCCCTGGGATCTCAGACACTATGGTGGCACAGCTTGTGCAGCGGCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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| CDS GCA 72 bp | GCTCCTCCGCCACTCAGAGAATATCTCTGCAGCCGCTaGACAAGCTGTGCCACCATAGTGTCTGAGATCCCA | + |
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Preference number: 6 (lower is better) Translates to: APPPLREYLCSR*TSCATIVSEIP Trigger: TGGGATCTCAGACACTATGGTGGCACAGCTTGTGCAGCGGCTGCAGAGATATTCTCTGAGTGGCGGAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079817.8 |
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