Pregenerated sensors for STK19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061207Ensembl transcript IDs: ENSMUST00000077477.12, ENSMUST00000159333.2, ENSMUST00000161885.8, ENSMUST00000162055.8
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGCCCAGCTTGCAGCAGCAGAGCCTGGCACCCACTGCGGTGACTTaGTCAGCCACCCTGGGGTGGCACTTCCAGGAACCTCACTCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: KPSLQQQSLAPTAVT*SATLGWHFQEPHSV Trigger: CACTGAGTGAGGTTCCTGGAAGTGCCACCCCAGGGTGGCTGAGCAAGTCACCGCAGTGGGTGCCAGGCTCTGCTGCTGCAAGCTGGGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| 3UTR GCA 90 bp | TTGGCACGGCTCCTGACTCCACACGCACAGAAGCAAGAGCTGCAATaGCCACAGCCCAGCTCAGGTAGAAGCCCAGCTTGCAGCAGCAGA | + |
|
Preference number: 1 (lower is better) Translates to: LARLLTPHAQKQELQ*PQPSSGRSPACSSR Trigger: TCTGCTGCTGCAAGCTGGGCTTCTACCTGAGCTGGGCTGTGGGCATTGCAGCTCTTGCTTCTGTGCGTGTGGAGTCAGGAGCCGTGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| 3UTR TCA 90 bp | CTTGCTCAGCCACCCTGGGGTGGCACTTCCAGGAACCTCACTCAGTaGGTTGCAGAATCCAAGCATTGGCTCCTCATGTATCTGGCAGGC | + |
|
Preference number: 1 (lower is better) Translates to: LAQPPWGGTSRNLTQ*VAESKHWLLMYLAG Trigger: GCCTGCCAGATACATGAGGAGCCAATGCTTGGATTCTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCCAGGGTGGCTGAGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161885.8 ENSMUST00000162055.8 |
||
| 3UTR CAA 90 bp | GAAGCCCAGCTTGCAGCAGCAGAGCCTGGCACCCACTGCGGTGACTaGCTCAGCCACCCTGGGGTGGCACTTCCAGGAACCTCACTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: EAQLAAAEPGTHCGD*LSHPGVALPGTSLS Trigger: ACTGAGTGAGGTTCCTGGAAGTGCCACCCCAGGGTGGCTGAGCAAGTCACCGCAGTGGGTGCCAGGCTCTGCTGCTGCAAGCTGGGCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| 3UTR-3UTR TCA 90 bp | GCACAGAAGCAAGAGCTGCAATGCCCACAGCCCAGCTCAGGTAGAAGCCCAGCTTGGCACCCACTGCGGTaGCTTGCTCAGCCACCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: AQKQELQCPQPSSGRSPAWHPLR*LAQPPW Trigger: CCAGGGTGGCTGAGCAAGTCACCGCAGTGGGTGCCA...AGCTGGGCTTCTACCTGAGCTGGGCTGTGGGCATTGCAGCTCTTGCTTCTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTCCAGTGTCTCCAGCAACCCCACCTTCTCATCCCCTTGGCACGGCTCCTGGGTAGAAGCCCAGCTTaGAGCAGCAGAGCCTGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LLQCLQQPHLLIPLARLLGRSPA*SSRAWH Trigger: GTGCCAGGCTCTGCTGCTGCAAGCTGGGCTTCTACC...CAGGAGCCGTGCCAAGGGGATGAGAAGGTGGGGTTGCTGGAGACACTGGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGTGTCTCCAGCAACCCCACCTTCTCATCCCCTTGGCACGGCTCCTGACTCCAGGTAGAAGCCCAGCTTaGAGCAGCAGAGCCTGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: QCLQQPHLLIPLARLLTPGRSPA*SSRAWH Trigger: GTGCCAGGCTCTGCTGCTGCAAGCTGGGCTTCTACC...TGGAGTCAGGAGCCGTGCCAAGGGGATGAGAAGGTGGGGTTGCTGGAGACACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCTGCTCCAGTGTCTCCAGCAACCCCACCTTCTCATCCCCTTGGCACGGCTCCAAGCAAGAGCTGCAATaGCCACAGCCCAGCTCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: PCSSVSSNPTFSSPWHGSKQELQ*PQPSSG Trigger: ACCTGAGCTGGGCTGTGGGCATTGCAGCTCTTGCTT...GGAGCCGTGCCAAGGGGATGAGAAGGTGGGGTTGCTGGAGACACTGGAGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| 3UTR-3UTR GCA 90 bp | CACCCTGGGGTGGCACTTCCAGGAACCTCACTCAGTGAGTTGCAGAATCCAAGCCTGCCAAAGGGGCCCTaGGGCCCAGGAGCTCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: HPGVALPGTSLSELQNPSLPKGP*GPGALT Trigger: TGTCAGAGCTCCTGGGCCGCAGGGCCCCTTTGGCAG...GCTTGGATTCTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCCAGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161885.8 ENSMUST00000162055.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGGTGGCACTTCCAGGAACCTCACTCAGTGAGTTGCAGAATCCAAGCATTGGCCTGCCAAAGGGGCCCTaGGGCCCAGGAGCTCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: GVALPGTSLSELQNPSIGLPKGP*GPGALT Trigger: TGTCAGAGCTCCTGGGCCGCAGGGCCCCTTTGGCAG...GCCAATGCTTGGATTCTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161885.8 ENSMUST00000162055.8 |
||
| 3UTR CAA 90 bp | TACTCCCTGCTCCAGTGTCTCCAGCAACCCCACCTTCTCATCCCCTaGGCACGGCTCCTGACTCCACACGCACAGAAGCAAGAGCTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: YSLLQCLQQPHLLIP*ARLLTPHAQKQELQ Trigger: TTGCAGCTCTTGCTTCTGTGCGTGTGGAGTCAGGAGCCGTGCCAAGGGGATGAGAAGGTGGGGTTGCTGGAGACACTGGAGCAGGGAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGGGTGGCACTTCCAGGAACCTCACTCAGTGAGTTGCAGAATCCAAGCATTCAGCATCTCGGACAGTaGGGACCCCAGCGTTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: PGVALPGTSLSELQNPSIQHLGQ*GPQRSP Trigger: TGGTGAACGCTGGGGTCCTCACTGTCCGAGATGCTG...AATGCTTGGATTCTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162055.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGACTCCACACGCACAGAAGCAAGAGCTGCAATGCCCACAGCCCAGCTCAGGGAGTTTTCTACTCCCTaGTCCAGTGTCTCCAGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: PDSTRTEARAAMPTAQLREFSTP*SSVSSN Trigger: GTTGCTGGAGACACTGGAGCAGGGAGTAGAAAACTC...CCTGAGCTGGGCTGTGGGCATTGCAGCTCTTGCTTCTGTGCGTGTGGAGTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGGGTGGCACTTCCAGGAACCTCACTCAGTGAGTTGCAGAATCCAAGCATTCTTGCTCAGCCACCCTaGGGTGGCACTTCCAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: PGVALPGTSLSELQNPSILAQPP*GGTSRN Trigger: GTTCCTGGAAGTGCCACCCCAGGGTGGCTGAGCAAG...AATGCTTGGATTCTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 ENSMUST00000162055.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGGTGGCACTTCCAGGAACCTCACTCAGTGAGTTGCAGAATCCAAGCATTGCTTGCTCAGCCACCCTaGGGTGGCACTTCCAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LGWHFQEPHSVSCRIQALLAQPP*GGTSRN Trigger: GTTCCTGGAAGTGCCACCCCAGGGTGGCTGAGCAAG...CAATGCTTGGATTCTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 ENSMUST00000162055.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGGGTGGCACTTCCAGGAACCTCACTCAGTGAGTTGCAGAATCCAAGCATTAAGCAAGAGCTGCAATaGCCACAGCCCAGCTCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: PGVALPGTSLSELQNPSIKQELQ*PQPSSG Trigger: ACCTGAGCTGGGCTGTGGGCATTGCAGCTCTTGCTT...AATGCTTGGATTCTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTGGCACTTCCAGGAACCTCACTCAGTGAGTTGCAGAATCCAAGCATTGGCCACAAGTATTTTATTTaGCAATTTCAGCCTGACGTG | + |
|
Preference number: 2 (lower is better) Translates to: GVALPGTSLSELQNPSIGHKYFI*QFQPDV Trigger: CACGTCAGGCTGAAATTGCCAAATAAAATACTTGTG...GCCAATGCTTGGATTCTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCGAAGGAGGGTTCCAGAAGTGGTGGGGACACAGTCCACCAGCTGGGCTCCAGCAAGCTCCCGGTACTaGGCCTTCCGCACCATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RRRRVPEVVGTQSTSWAPASSRY*AFRTML Trigger: GAGCATGGTGCGGAAGGCCAAGTACCGGGAGCTTGC...TGGAGCCCAGCTGGTGGACTGTGTCCCCACCACTTCTGGAACCCTCCTTCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161885.8 ENSMUST00000162055.8 |
||
| 3UTR CCA 72 bp | GCACCCACTGCGGTGACTTGCTCAGCCACCCTGGGGTaGCACTTCCAGGAACCTCACTCAGTGAGTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: APTAVTCSATLG*HFQEPHSVSCR Trigger: TCTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCCAGGGTGGCTGAGCAAGTCACCGCAGTGGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 ENSMUST00000162055.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCACCCACTGCGGTGACTTGCTCAGCCACCCTGGGGTGGCACTTCCAGGAACCACCTCACTCAGTGAGTaGCAGAATCCAAGCATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GTHCGDLLSHPGVALPGTTSLSE*QNPSIG Trigger: GCCAATGCTTGGATTCTGCAACTCACTGAGTGAGGT...GGTTCCTGGAAGTGCCACCCCAGGGTGGCTGAGCAAGTCACCGCAGTGGGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 ENSMUST00000162055.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAATGCCCACAGCCCAGCTCAGGTAGAAGCCCAGCTTGCAGCAGCAGAGCCACCTCACTCAGTGAGTaGCAGAATCCAAGCATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LQCPQPSSGRSPACSSRATSLSE*QNPSIG Trigger: GCCAATGCTTGGATTCTGCAACTCACTGAGTGAGGT...GGCTCTGCTGCTGCAAGCTGGGCTTCTACCTGAGCTGGGCTGTGGGCATTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCGAAGGAGGGTTCCAGAAGTGGTGGGGACACAGTCCACCAGCTGGGCTCCAAACCTCACTCAGTGAGTaGCAGAATCCAAGCATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GEGGFQKWWGHSPPAGLQTSLSE*QNPSIG Trigger: GCCAATGCTTGGATTCTGCAACTCACTGAGTGAGGT...TTGGAGCCCAGCTGGTGGACTGTGTCCCCACCACTTCTGGAACCCTCCTTCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161885.8 ENSMUST00000162055.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACCCTGGGGTGGCACTTCCAGGAACCTCACTCAGTGAGTTGCAGAATCCACCTTTAACAAAGCACTaGATGAATCTCCCAGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SHPGVALPGTSLSELQNPPLTKH*MNLPAP Trigger: TGGAGCTGGGAGATTCATCAAGTGCTTTGTTAAAGG...TGGATTCTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCCAGGGTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162055.8 |
||
| CDS-3UTR CCA 90 bp | GGCACCCACTGCGGTGACTTGCTCAGCCACCCTGGGGTGGCACTTCCAGGAACCGGCTCCTCAGCGCGATaGGCGGCAGCGCATCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GTHCGDLLSHPGVALPGTGSSAR*AAAHPR Trigger: TCGAGGATGCGCTGCCGCCCATCGCGCTGAGGAGCC...GGTTCCTGGAAGTGCCACCCCAGGGTGGCTGAGCAAGTCACCGCAGTGGGTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| CDS-3UTR TCA 90 bp | CAATGCCCACAGCCCAGCTCAGGTAGAAGCCCAGCTTGCAGCAGCAGAGCCTGGCAGCATCTCGGACAGTaGGGACCCCAGCGTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QCPQPSSGRSPACSSRAWQHLGQ*GPQRSP Trigger: TGGTGAACGCTGGGGTCCTCACTGTCCGAGATGCTG...CCAGGCTCTGCTGCTGCAAGCTGGGCTTCTACCTGAGCTGGGCTGTGGGCATTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| CDS-3UTR TCA 90 bp | AGGCGAAGGAGGGTTCCAGAAGTGGTGGGGACACAGTCCACCAGCTGGGCTCCACAGCATCTCGGACAGTaGGGACCCCAGCGTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RRRRVPEVVGTQSTSWAPQHLGQ*GPQRSP Trigger: TGGTGAACGCTGGGGTCCTCACTGTCCGAGATGCTG...TGGAGCCCAGCTGGTGGACTGTGTCCCCACCACTTCTGGAACCCTCCTTCGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161885.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAGAGCTGCAATGCCCACAGCCCAGCTCAGGTAGAAGCCCAGCTTGCAGCACACCGCCCCAGCACATaGTCGGCCATCACAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKSCNAHSPAQVEAQLAAHRPST*SAITGL Trigger: AAGGCCTGTGATGGCCGACCATGTGCTGGGGCGGTG...TGCTGCAAGCTGGGCTTCTACCTGAGCTGGGCTGTGGGCATTGCAGCTCTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077477.12 |
||
| CDS-3UTR TCA 90 bp | TTGCTCAGCCACCCTGGGGTGGCACTTCCAGGAACCTCACTCAGTGAGTTGCAGACAGGCTGGGAGCACTaGGGCCAGGAACTTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLSHPGVALPGTSLSELQTGWEH*GQELLH Trigger: GTGCAGAAGTTCCTGGCCTCAGTGCTCCCAGCCTGT...CTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCCAGGGTGGCTGAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000162055.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAAGAGCTGCAATGCCCACAGCCCAGCTCAGGTAGAAGCCCAGCTTGCAGCGATCCTGCTGGAAACTaGGGTCCCCACAGGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQELQCPQPSSGRSPACSDPAGN*GPHRLG Trigger: TCCCAGCCTGTGGGGACCTCAGTTTCCAGCAGGATC...GCTGCAAGCTGGGCTTCTACCTGAGCTGGGCTGTGGGCATTGCAGCTCTTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077477.12 |
||
| 3UTR CAA 72 bp | CTCCAGTGTCTCCAGCAACCCCACCTTCTCATCCCCTaGGCACGGCTCCTGACTCCACACGCACAGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LQCLQQPHLLIP*ARLLTPHAQKQ Trigger: TTGCTTCTGTGCGTGTGGAGTCAGGAGCCGTGCCAAGGGGATGAGAAGGTGGGGTTGCTGGAGACACTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGGTGGCACTTCCAGGAACCTCACTCAGTGAGTTGCAGAATCCAAGCATTGCTGCCAAAGGGGCCCTaGGGCCCAGGAGCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGWHFQEPHSVSCRIQALLPKGP*GPGALT Trigger: TGTCAGAGCTCCTGGGCCGCAGGGCCCCTTTGGCAG...CAATGCTTGGATTCTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077477.12 |
||
| CDS-3UTR CCA 90 bp | CCACACGCACAGAAGCAAGAGCTGCAATGCCCACAGCCCAGCTCAGGTAGAAGCACCAGACTGTACACTTaGCTCCTCAGCGCGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PHAQKQELQCPQPSSGRSTRLYT*LLSAMG Trigger: GCCCATCGCGCTGAGGAGCCAAGTGTACAGTCTGGT...GCTTCTACCTGAGCTGGGCTGTGGGCATTGCAGCTCTTGCTTCTGTGCGTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| CDS-3UTR TCA 90 bp | CCCACTGCGGTGACTTGCTCAGCCACCCTGGGGTGGCACTTCCAGGAACCTCACGTGAAGACAATCCCATaGGCATCCAAGTCAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTAVTCSATLGWHFQEPHVKTIP*ASKSKP Trigger: AGGCTTTGACTTGGATGCTCATGGGATTGTCTTCAC...GTGAGGTTCCTGGAAGTGCCACCCCAGGGTGGCTGAGCAAGTCACCGCAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077477.12 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGTGGCACTTCCAGGAACCTCACTCAGTGAGTTGCAGAATCCAAGCATTACAGGCTGGGAGCACTaGGGCCAGGAACTTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGVALPGTSLSELQNPSITGWEH*GQELLH Trigger: GTGCAGAAGTTCCTGGCCTCAGTGCTCCCAGCCTGT...AATGCTTGGATTCTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000162055.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGCACTTCCAGGAACCTCACTCAGTGAGTTGCAGAATCCAAGCATTGGCACCAGACTGTACACTTaGCTCCTCAGCGCGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVALPGTSLSELQNPSIGTRLYT*LLSAMG Trigger: GCCCATCGCGCTGAGGAGCCAAGTGTACAGTCTGGT...GCCAATGCTTGGATTCTGCAACTCACTGAGTGAGGTTCCTGGAAGTGCCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| 3UTR CAA 72 bp | ATGCTCAGTACAGCCTGGCGCCCTTTAACAAAGCACTaGATGAATCTCCCAGCTCCAGGCACAGCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MLSTAWRPLTKH*MNLPAPGTASH Trigger: GTGGCTGGCTGTGCCTGGAGCTGGGAGATTCATCAAGTGCTTTGTTAAAGGGCGCCAGGCTGTACTGAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162055.8 |
||
| CDS-3UTR TCA 90 bp | GTGAAGGGCAGAGTTTTCTACTCCCTGCTCCAGTGTCTCCAGCAACCCCACCTTATCTCTCCCAGCTCTTaGAGCTCCTTCAGTTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKGRVFYSLLQCLQQPHLISPSS*SSFSCR Trigger: CCTACAACTGAAGGAGCTTCAAGAGCTGGGAGAGAT...AAGGTGGGGTTGCTGGAGACACTGGAGCAGGGAGTAGAAAACTCTGCCCTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077477.12 |
||
| CDS-3UTR CCA 90 bp | CACAAGTATTTTATTTGGCAATTTCAGCCTGACGTGAAGGGCAGAGTTTTCTACGGCTCCTCAGCGCGATaGGCGGCAGCGCATCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HKYFIWQFQPDVKGRVFYGSSAR*AAAHPR Trigger: TCGAGGATGCGCTGCCGCCCATCGCGCTGAGGAGCC...GTAGAAAACTCTGCCCTTCACGTCAGGCTGAAATTGCCAAATAAAATACTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| CDS CCA 90 bp | CCGTCCGGTCTGGCACCAGACTGTACACTTGGCTCCTCAGCGCGATaGGCGGCAGCGCATCCTCGAACAGCCCCCGGGGAAACAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSGLAPDCTLGSSAR*AAAHPRTAPGETAS Trigger: TGAAGCTGTTTCCCCGGGGGCTGTTCGAGGATGCGCTGCCGCCCATCGCGCTGAGGAGCCAAGTGTACAGTCTGGTGCCAGACCGGACGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| CDS CCA 90 bp | AGTTGTAGGTCGGCCACCGTCCGGTCTGGCACCAGACTGTACACTTaGCTCCTCAGCGCGATGGGCGGCAGCGCATCCTCGAACAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SCRSATVRSGTRLYT*LLSAMGGSASSNSP Trigger: GGGGCTGTTCGAGGATGCGCTGCCGCCCATCGCGCTGAGGAGCCAAGTGTACAGTCTGGTGCCAGACCGGACGGTGGCCGACCTACAACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| CDS-3UTR CAA 90 bp | CAATGCCCACAGCCCAGCTCAGGTAGAAGCCCAGCTTGCAGCAGCAGAGCCTGGCACCAGACTGTACACTaGGCTCCTCAGCGCGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: QCPQPSSGRSPACSSRAWHQTVH*APQRDG Trigger: CCCATCGCGCTGAGGAGCCAAGTGTACAGTCTGGTG...CCAGGCTCTGCTGCTGCAAGCTGGGCTTCTACCTGAGCTGGGCTGTGGGCATTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTCCAGCAACCCCACCTTCTCATCCCCTTGGCACGGCTCCTGACTCCACACGCAAGCTCCCGGTACTaGGCCTTCCGCACCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLQQPHLLIPLARLLTPHASSRY*AFRTML Trigger: GAGCATGGTGCGGAAGGCCAAGTACCGGGAGCTTGC...GTGTGGAGTCAGGAGCCGTGCCAAGGGGATGAGAAGGTGGGGTTGCTGGAGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077477.12 |
||
| CDS-3UTR CAA 90 bp | TTTCAGCCTGACGTGAAGGGCAGAGTTTTCTACTCCCTGCTCCAGTGTCTCCAGCACCAGACTGTACACTaGGCTCCTCAGCGCGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: FQPDVKGRVFYSLLQCLQHQTVH*APQRDG Trigger: CCCATCGCGCTGAGGAGCCAAGTGTACAGTCTGGTG...CTGGAGACACTGGAGCAGGGAGTAGAAAACTCTGCCCTTCACGTCAGGCTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| CDS-3UTR CAA 90 bp | AATGCCCACAGCCCAGCTCAGGTAGAAGCCCAGCTTGCAGCAGCAGAGCCTGGCCCTTTAACAAAGCACTaGATGAATCTCCCAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NAHSPAQVEAQLAAAEPGPLTKH*MNLPAP Trigger: TGGAGCTGGGAGATTCATCAAGTGCTTTGTTAAAGG...GCCAGGCTCTGCTGCTGCAAGCTGGGCTTCTACCTGAGCTGGGCTGTGGGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077477.12 |
||
| CDS CCA 72 bp | TCGGCCACCGTCCGGTCTGGCACCAGACTGTACACTTaGCTCCTCAGCGCGATGGGCGGCAGCGCATCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SATVRSGTRLYT*LLSAMGGSASS Trigger: CGAGGATGCGCTGCCGCCCATCGCGCTGAGGAGCCAAGTGTACAGTCTGGTGCCAGACCGGACGGTGGCCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| CDS CAA 72 bp | GTCGGCCACCGTCCGGTCTGGCACCAGACTGTACACTaGGCTCCTCAGCGCGATGGGCGGCAGCGCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VGHRPVWHQTVH*APQRDGRQRIL Trigger: GAGGATGCGCTGCCGCCCATCGCGCTGAGGAGCCAAGTGTACAGTCTGGTGCCAGACCGGACGGTGGCCGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| CDS CCA 72 bp | CTGGCACCAGACTGTACACTTGGCTCCTCAGCGCGATaGGCGGCAGCGCATCCTCGAACAGCCCCCGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LAPDCTLGSSAR*AAAHPRTAPGE Trigger: TTCCCCGGGGGCTGTTCGAGGATGCGCTGCCGCCCATCGCGCTGAGGAGCCAAGTGTACAGTCTGGTGCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000161885.8 |
||
| CDS CAA 90 bp | GCGAAGGAGGGTTCCAGAAGTGGTGGGGACACTTTAACAAAGCACTaGATGAATCTCCCAGCTCCAGGCACAGCCAGCCACCAGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AKEGSRSGGDTLTKH*MNLPAPGTASHQLP Trigger: TGGAAGCTGGTGGCTGGCTGTGCCTGGAGCTGGGAGATTCATCAAGTGCTTTGTTAAAGTGTCCCCACCACTTCTGGAACCCTCCTTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159333.2 |
||
| CDS TCA 72 bp | AAGCCTAGCTGGATAATTCGGATCTCTCCCAGCTCTTaGAGCTCCTTCAGTTGTAGGTCGGCCACCGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: KPSWIIRISPSS*SSFSCRSATVR Trigger: CCGGACGGTGGCCGACCTACAACTGAAGGAGCTTCAAGAGCTGGGAGAGATCCGAATTATCCAGCTAGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077477.12 ENSMUST00000159333.2 |
||
| CDS CAA 72 bp | GGTTCCAGAAGTGGTGGGGACACTTTAACAAAGCACTaGATGAATCTCCCAGCTCCAGGCACAGCCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GSRSGGDTLTKH*MNLPAPGTASH Trigger: GTGGCTGGCTGTGCCTGGAGCTGGGAGATTCATCAAGTGCTTTGTTAAAGTGTCCCCACCACTTCTGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159333.2 |
||