Pregenerated sensors for STK16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026201Ensembl transcript IDs: ENSMUST00000027401.11, ENSMUST00000123825.8, ENSMUST00000144355.8, ENSMUST00000189698.7, ENSMUST00000191108.7
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTCAGCATGTAGGGGTGGAATCTCCAGAACAGGAGCACCATCCCTaGCCTTGTCTCCCCTCCCTGGTGACTCAGGGAAGCAGTGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: RQHVGVESPEQEHHP*PCLPSLVTQGSSAL Trigger: AAGGGCACTGCTTCCCTGAGTCACCAGGGAGGGGAGACAAGGGCAGGGATGGTGCTCCTGTTCTGGAGATTCCACCCCTACATGCTGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR CCA 90 bp | CTGGGCGGGCCCAAAGTTCCCGGGCATACAGCCACCTCACAAACTTaGGGGATGGGCAGGAACAAGGGCAATCTAGTTGTTTGTGCCACA | + |
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Preference number: 1 (lower is better) Translates to: LGGPKVPGHTATSQT*GMGRNKGNLVVCAT Trigger: TGTGGCACAAACAACTAGATTGCCCTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTTTGGGCCCGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR TCA 90 bp | ATAAACAGTCTCCTTGCATGGTTTCTTGTCCCCTTTGTAACTGCTTaGGCCTCTGCTTGTCCCCCTTTCTGCTTTGGCTGCTACCTCCCG | + |
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Preference number: 1 (lower is better) Translates to: INSLLAWFLVPFVTA*ASACPPFCFGCYLP Trigger: CGGGAGGTAGCAGCCAAAGCAGAAAGGGGGACAAGCAGAGGCTCAAGCAGTTACAAAGGGGACAAGAAACCATGCAAGGAGACTGTTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR GCA 90 bp | TGTGCTTTCTTTTGGCTTCAGCCTCTGCTCGGGGTGGAAGCCTCCTaGCTGGACCCTAGGGATAAATTATACTTCACTAATAGGCACCCT | + |
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Preference number: 1 (lower is better) Translates to: CAFFWLQPLLGVEAS*LDPRDKLYFTNRHP Trigger: AGGGTGCCTATTAGTGAAGTATAATTTATCCCTAGGGTCCAGGCAGGAGGCTTCCACCCCGAGCAGAGGCTGAAGCCAAAAGAAAGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR CCA 90 bp | CTTTCTTTTGGCTTCAGCCTCTGCTCGGGGTGGAAGCCTCCTGCCTaGACCCTAGGGATAAATTATACTTCACTAATAGGCACCCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: LSFGFSLCSGWKPPA*TLGINYTSLIGTLG Trigger: TCCTAGGGTGCCTATTAGTGAAGTATAATTTATCCCTAGGGTCCAGGCAGGAGGCTTCCACCCCGAGCAGAGGCTGAAGCCAAAAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR TCA 90 bp | CTTGGCACAGACAGAAACCAGCTCAAGCTTGAAGCTCTCTGGTTTTaGCTAAGCCAGCTTAAAAGACCTGCCTGCTGCCAGAACTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: LGTDRNQLKLEALWF*LSQLKRPACCQNSR Trigger: TCTTGAGTTCTGGCAGCAGGCAGGTCTTTTAAGCTGGCTTAGTCAAAACCAGAGAGCTTCAAGCTTGAGCTGGTTTCTGTCTGTGCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR CCA 90 bp | TGTTTCATTTTCCCCCAACTCACCCTAGGTTCCTTGCCCAGGTATTaGGGTAAGAAGGCAGAATATACAAGGACCCACTATCCTTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: CFIFPQLTLGSLPRY*GKKAEYTRTHYPCH Trigger: GTGGCAAGGATAGTGGGTCCTTGTATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAGTTGGGGGAAAATGAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
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| 3UTR GCA 90 bp | AACTCAAGAAGTAGATCTACCTCAAGACATCATACCAGTACTTCTTaGCAGGAGCTTCCCTTGGAAATAGCAAGCAGAGAGTTCATTCTT | + |
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Preference number: 1 (lower is better) Translates to: NSRSRSTSRHHTSTS*QELPLEIASREFIL Trigger: AAGAATGAACTCTCTGCTTGCTATTTCCAAGGGAAGCTCCTGGCAAGAAGTACTGGTATGATGTCTTGAGGTAGATCTACTTCTTGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR TCA 90 bp | GATACAAGTCTTCACTTTCTGAAATATCTGATAGTCTGTGTTGGATaGTTGGACTACTTTATTCTTCTTGCTGCTGCTTCACTCAACAGC | + |
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Preference number: 1 (lower is better) Translates to: DTSLHFLKYLIVCVG*LDYFILLAAASLNS Trigger: GCTGTTGAGTGAAGCAGCAGCAAGAAGAATAAAGTAGTCCAATCATCCAACACAGACTATCAGATATTTCAGAAAGTGAAGACTTGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR TCA 90 bp | TTGGAAATAGCAAGCAGAGAGTTCATTCTTTCCCTCCAGACACATTaGCCTAAAATATACACGGTCTGTTTTTACTTTATTCTCCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: LEIASREFILSLQTH*PKIYTVCFYFILLF Trigger: AAAAAGGAGAATAAAGTAAAAACAGACCGTGTATATTTTAGGTCAATGTGTCTGGAGGGAAAGAATGAACTCTCTGCTTGCTATTTCCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR GCA 90 bp | CTTTCTTTTGGCTTCAGCCTCTGCTCGGGGTGGAAGCCTCCTGCCTGGACCCTAAGGGCAGGAAGTGGCTaGTGGGTACTGCCACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LSFGFSLCSGWKPPAWTLRAGSG*WVLPQA Trigger: GGCCTGTGGCAGTACCCAGCAGCCACTTCCTGCCCT...TAGGGTCCAGGCAGGAGGCTTCCACCCCGAGCAGAGGCTGAAGCCAAAAGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR CAA 90 bp | ACAGCTCTAGAAGGCTTGGCCCAGGCGTCATTGAACACTGAGGATTaGGGAATGGGGGCTGGGCGGGCCCAAAGTTCCCGGGCATACAGC | + |
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Preference number: 2 (lower is better) Translates to: TALEGLAQASLNTED*GMGAGRAQSSRAYS Trigger: GCTGTATGCCCGGGAACTTTGGGCCCGCCCAGCCCCCATTCCCAAATCCTCAGTGTTCAATGACGCCTGGGCCAAGCCTTCTAGAGCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR GCA 90 bp | AAAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGGGTGGAAGCCTCCTaGCTGGACCCTAGGGATAAA | + |
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Preference number: 2 (lower is better) Translates to: KVPGHTATSQTWGMGRNKGVEAS*LDPRDK Trigger: TTTATCCCTAGGGTCCAGGCAGGAGGCTTCCACCCC...CTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR GCA 90 bp | AACTGCTTGAGCCTCTGCTTGTCCCCCTTTCTGCTTTGGCTGCTACCTCCCGCTGCTGACAGTGAGACTTaGCAAGGGGGCCCCATATTG | + |
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Preference number: 2 (lower is better) Translates to: NCLSLCLSPFLLWLLPPAADSET*QGGPIL Trigger: CAATATGGGGCCCCCTTGGCAAGTCTCACTGTCAGC...AGCGGGAGGTAGCAGCCAAAGCAGAAAGGGGGACAAGCAGAGGCTCAAGCAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR TCA 90 bp | CCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGCAATCAGCAGTGCCCTTCCCTaGGGAAAGTTTGAAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: PGIQPPHKLGGWAGTRAISSALP*GKFETQ Trigger: TTGGGTTTCAAACTTTCCTCAGGGAAGGGCACTGCT...GATTGCCCTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTTTTGGCTTCAGCCTCTGCTCGGGGTGGAAGCCTCCTGCCTGGACCCTAAGTTCCAATGAGGGATaGAAGCCACTTCAAGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: LSFGFSLCSGWKPPAWTLSSNEG*KPLQGH Trigger: ATGACCTTGAAGTGGCTTTCATCCCTCATTGGAACT...TAGGGTCCAGGCAGGAGGCTTCCACCCCGAGCAGAGGCTGAAGCCAAAAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGGGTACTGCCACAGGCCACCAGCCTCATCAATTATTAACCATGTGTGAGGATCTGGAGACAGAATaGGATGTGCACCCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LLGTATGHQPHQLLTMCEDLETE*DVHPAA Trigger: GGCTGCTGGGTGCACATCTCATTCTGTCTCCAGATC...CTCACACATGGTTAATAATTGATGAGGCTGGTGGCCTGTGGCAGTACCCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR TCA 90 bp | AAAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGCACCCTGGGAATGAATaGCAGAACTGGTTGAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: KVPGHTATSQTWGMGRNKHPGNE*QNWLSV Trigger: CACACTCAACCAGTTCTGTCATTCATTCCCAGGGTG...CTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR TCA 90 bp | AACTGCTTGAGCCTCTGCTTGTCCCCCTTTCTGCTTTGGCTGCTACCTCCCGCTTCCCTCCAGACACATTaGCCTAAAATATACACGGTC | + |
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Preference number: 2 (lower is better) Translates to: NCLSLCLSPFLLWLLPPASLQTH*PKIYTV Trigger: GACCGTGTATATTTTAGGTCAATGTGTCTGGAGGGA...AGCGGGAGGTAGCAGCCAAAGCAGAAAGGGGGACAAGCAGAGGCTCAAGCAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGTGGAAGCCTCCTGCCTaGACCCTAGGGATAAATTAT | + |
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Preference number: 2 (lower is better) Translates to: KVPGHTATSQTWGMGRNKWKPPA*TLGINY Trigger: ATAATTTATCCCTAGGGTCCAGGCAGGAGGCTTCCA...CTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR TCA 90 bp | GGAGACAGAATGAGATGTGCACCCAGCAGCCTAGCTTTGAGCCATATTTTCTGTATGCCTCCAACTGACTaGGGAGGACAGGGATGTGAG | + |
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Preference number: 2 (lower is better) Translates to: GDRMRCAPSSLALSHIFCMPPTD*GGQGCE Trigger: CTCACATCCCTGTCCTCCTCAGTCAGTTGGAGGCAT...ACAGAAAATATGGCTCAAAGCTAGGCTGCTGGGTGCACATCTCATTCTGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191108.7 |
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| 3UTR-3UTR GCA 90 bp | AACTGCTTGAGCCTCTGCTTGTCCCCCTTTCTGCTTTGGCTGCTACCTCCCGCTCAGCTTTGCATAGCTTaGTGTCTATCTTGCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: NCLSLCLSPFLLWLLPPAQLCIA*CLSCFL Trigger: CAGAAAGCAAGATAGACAGCAAGCTATGCAAAGCTG...AGCGGGAGGTAGCAGCCAAAGCAGAAAGGGGGACAAGCAGAGGCTCAAGCAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGCTTCACTCAACAGCTCTAGAAGGCTTGGCCCAGGCGTCATTGAACACTGTCTATCTTGCTTTCTaGGGCTGGAGCCATGCTATT | + |
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Preference number: 2 (lower is better) Translates to: LLLHSTALEGLAQASLNTVYLAF*GWSHAI Trigger: AATAGCATGGCTCCAGCCCCAGAAAGCAAGATAGAC...AGTGTTCAATGACGCCTGGGCCAAGCCTTCTAGAGCTGTTGAGTGAAGCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR CAA 90 bp | CAGAACTGGTTGAGTGTGCTTTCAAGGAGACCCTGGTCCCACTTCTaGGCACAGACAGAAACCAGCTCAAGCTTGAAGCTCTCTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: QNWLSVLSRRPWSHF*AQTETSSSLKLSGF Trigger: AAAACCAGAGAGCTTCAAGCTTGAGCTGGTTTCTGTCTGTGCCAAGAAGTGGGACCAGGGTCTCCTTGAAAGCACACTCAACCAGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR CAA 90 bp | AATAAACAGTCTCCTTGCATGGTTTCTTGTCCCCTTTGTAACTGCTaGAGCCTCTGCTTGTCCCCCTTTCTGCTTTGGCTGCTACCTCCC | + |
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Preference number: 2 (lower is better) Translates to: NKQSPCMVSCPLCNC*SLCLSPFLLWLLPP Trigger: GGGAGGTAGCAGCCAAAGCAGAAAGGGGGACAAGCAGAGGCTCAAGCAGTTACAAAGGGGACAAGAAACCATGCAAGGAGACTGTTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR TCA 90 bp | CCCCAACTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATTGGAAGGAGTTCCAATaGGGGATGAAAGCCACTTCA | + |
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Preference number: 2 (lower is better) Translates to: PQLTLGSLPRYWGKKAEYWKEFQ*GMKATS Trigger: TGAAGTGGCTTTCATCCCTCATTGGAACTCCTTCCA...ATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAGTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
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| 3UTR-3UTR TCA 90 bp | CCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGCAATCATTATTAACCATGTGTaGGCTAGAATAGTCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: PGIQPPHKLGGWAGTRAIIINHV*ARIVRE Trigger: TTCCCTGACTATTCTAGCTCACACATGGTTAATAAT...GATTGCCCTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR GCA 90 bp | CAAGGACCAAACCCTGGACCTGTCTGTCTAGCTACAAGCTATTGCAAGATACAAGCTTGCTGTCTATCTTaGTTTCTGGGGCTGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: QGPNPGPVCLATSYCKIQACCLS*FLGLEP Trigger: TGGCTCCAGCCCCAGAAAGCAAGATAGACAGCAAGC...TTGTATCTTGCAATAGCTTGTAGCTAGACAGACAGGTCCAGGGTTTGGTCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR TCA 90 bp | CTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATACAAGGAGTTCCAATGAGGGATaGAAGCCACTTCAAGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: LTLGSLPRYWGKKAEYTRSSNEG*KPLQGH Trigger: ATGACCTTGAAGTGGCTTTCATCCCTCATTGGAACT...CCTTGTATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
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| 3UTR CAA 90 bp | CTAGGGATAAATTATACTTCACTAATAGGCACCCTAGGACTCATGTaGACGTCAGCATGTAGGGGTGGAATCTCCAGAACAGGAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: LGINYTSLIGTLGLM*TSACRGGISRTGAP Trigger: TGGTGCTCCTGTTCTGGAGATTCCACCCCTACATGCTGACGTCAACATGAGTCCTAGGGTGCCTATTAGTGAAGTATAATTTATCCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR TCA 90 bp | CAAGGACCAAACCCTGGACCTGTCTGTCTAGCTACAAGCTATTGCAAGATACAATCCCTGAGGAAAGTTTaGAACCCAACTAAGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: QGPNPGPVCLATSYCKIQSLRKV*NPTKAG Trigger: ACCTGCCTTAGTTGGGTTTCAAACTTTCCTCAGGGA...TTGTATCTTGCAATAGCTTGTAGCTAGACAGACAGGTCCAGGGTTTGGTCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR TCA 90 bp | CTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATACAAGGATATGTCCACTGATTTaGTCAGATTTGGGTGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LTLGSLPRYWGKKAEYTRICPLI*SDLGGV Trigger: CACACCACCCAAATCTGATCAAATCAGTGGACATAT...CCTTGTATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191108.7 |
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| 3UTR-3UTR TCA 90 bp | CTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATACAAGGTCCCAATATGTCCACTaGTTTGATCAGATTTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LTLGSLPRYWGKKAEYTRSQYVH*FDQIWV Trigger: CACCCAAATCTGATCAAATCAGTGGACATATTGGGA...CCTTGTATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191108.7 |
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| 3UTR-3UTR GCA 90 bp | GGAGACAGAATGAGATGTGCACCCAGCAGCCTAGCTTTGAGCCATATTTTCTGTAAAAGACCTGCCTGCTaGCAGAACTCAAGAAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: GDRMRCAPSSLALSHIFCKRPAC*QNSRSR Trigger: TCTACTTCTTGAGTTCTGGCAGCAGGCAGGTCTTTT...ACAGAAAATATGGCTCAAAGCTAGGCTGCTGGGTGCACATCTCATTCTGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR CAA 90 bp | TCTACCTCAAGACATCATACCAGTACTTCTTGCCAGGAGCTTCCCTaGGAAATAGCAAGCAGAGAGTTCATTCTTTCCCTCCAGACACAT | + |
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Preference number: 2 (lower is better) Translates to: STSRHHTSTSCQELP*EIASREFILSLQTH Trigger: ATGTGTCTGGAGGGAAAGAATGAACTCTCTGCTTGCTATTTCCAAGGGAAGCTCCTGGCAAGAAGTACTGGTATGATGTCTTGAGGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR TCA 90 bp | AATTATACTTCACTAATAGGCACCCTAGGACTCATGTTGACGTCAGCATGTAGGTACCCACCCTGGGAATaGATGACAGAACTGGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: NYTSLIGTLGLMLTSACRYPPWE*MTELVE Trigger: CTCAACCAGTTCTGTCATTCATTCCCAGGGTGGGTA...CCTACATGCTGACGTCAACATGAGTCCTAGGGTGCCTATTAGTGAAGTATAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTATCTTGCTTTCTGGGGCTGGAGCCATGCTATTAAAAGTCAGGTCGTCTTTTTATGTATTCTCCTaGTCCCAGATCTGGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: LSILLSGAGAMLLKVRSSFYVFS*SQIWRQ Trigger: CTGTCTCCAGATCTGGGAGCAGGAGAATACATAAAA...AGACGACCTGACTTTTAATAGCATGGCTCCAGCCCCAGAAAGCAAGATAGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR CCA 90 bp | CTATTGCAAGATACAAGTCTTCACTTTCTGAAATATCTGATAGTCTGTGTTGGAGTGCCACAGCACCTCTaGCAGCTTTGCATAGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: LLQDTSLHFLKYLIVCVGVPQHL*QLCIAC Trigger: GCAAGCTATGCAAAGCTGCCAGAGGTGCTGTGGCAC...TCCAACACAGACTATCAGATATTTCAGAAAGTGAAGACTTGTATCTTGCAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR CAA 90 bp | GAAACAAGGACCAAACCCTGGACCTGTCTGTCTAGCTACAAGCTATaGCAAGATACAAGTCTTCACTTTCTGAAATATCTGATAGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: ETRTKPWTCLSSYKL*QDTSLHFLKYLIVC Trigger: ACAGACTATCAGATATTTCAGAAAGTGAAGACTTGTATCTTGCAATAGCTTGTAGCTAGACAGACAGGTCCAGGGTTTGGTCCTTGTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR GCA 72 bp | GTAGGGGTGGAATCTCCAGAACAGGAGCACCATCCCTaGCCTTGTCTCCCCTCCCTGGTGACTCAGGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: VGVESPEQEHHP*PCLPSLVTQGS Trigger: GCTTCCCTGAGTCACCAGGGAGGGGAGACAAGGGCAGGGATGGTGCTCCTGTTCTGGAGATTCCACCCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR CAA 90 bp | AAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGCCAGCTCCACTCCCTTaGTCCTCTGCTGAAGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: KFPGIQPPHKLGGWAGTRPAPLP*SSAEEG Trigger: CCCTTCTTCAGCAGAGGACAAAGGGAGTGGAGCTGG...CCTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR CAA 90 bp | CCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGCAATCAGCTTGCTGTCTATCTaGCTTTCTGGGGCTGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: PGIQPPHKLGGWAGTRAISLLSI*LSGAGA Trigger: GGCTCCAGCCCCAGAAAGCAAGATAGACAGCAAGCT...GATTGCCCTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR GCA 72 bp | GTGCCTGTTTACTCAGCAAATAGGGCAGGAAGTGGCTaGTGGGTACTGCCACAGGCCACCAGCCTCATCAAT | + |
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Preference number: 3 (lower is better) Translates to: VPVYSANRAGSG*WVLPQATSLIN Trigger: ATTGATGAGGCTGGTGGCCTGTGGCAGTACCCAGCAGCCACTTCCTGCCCTATTTGCTGAGTAAACAGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR-3UTR CAA 90 bp | AAAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGTGCCAGGAGCTTCCCTaGGAAATAGCAAGCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: KVPGHTATSQTWGMGRNKCQELP*EIASRE Trigger: CTCTCTGCTTGCTATTTCCAAGGGAAGCTCCTGGCA...CTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR GCA 72 bp | CTTTGTCCTCTGCTGAAGAAGGGAAAAGACCCGGTGTaGTTCCACCCAGAGGTCACATGGACTTGGCAAACC | + |
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Preference number: 3 (lower is better) Translates to: LCPLLKKGKDPV*FHPEVTWTWQT Trigger: GGTTTGCCAAGTCCATGTGACCTCTGGGTGGAAGCACACCGGGTCTTTTCCCTTCTTCAGCAGAGGACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR CCA 72 bp | GGCTTCAGCCTCTGCTCGGGGTGGAAGCCTCCTGCCTaGACCCTAGGGATAAATTATACTTCACTAATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GFSLCSGWKPPA*TLGINYTSLIG Trigger: GCCTATTAGTGAAGTATAATTTATCCCTAGGGTCCAGGCAGGAGGCTTCCACCCCGAGCAGAGGCTGAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR-3UTR CAA 90 bp | AACTGCTTGAGCCTCTGCTTGTCCCCCTTTCTGCTTTGGCTGCTACCTCCCGCTGAAACCAGCTCAAGCTaGAAGCTCTCTGGTTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: NCLSLCLSPFLLWLLPPAETSSS*KLSGFD Trigger: GTCAAAACCAGAGAGCTTCAAGCTTGAGCTGGTTTC...AGCGGGAGGTAGCAGCCAAAGCAGAAAGGGGGACAAGCAGAGGCTCAAGCAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR GCA 72 bp | ATGGTTTCTTGTCCCCTTTGTAACTGCTTGAGCCTCTaGTTGTCCCCCTTTCTGCTTTGGCTGCTACCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: MVSCPLCNCLSL*LSPFLLWLLPP Trigger: GGGAGGTAGCAGCCAAAGCAGAAAGGGGGACAAGCAGAGGCTCAAGCAGTTACAAAGGGGACAAGAAACCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTGCTGGGTACTGCCACAGGCCACCAGCCTCATCAATTATTAACCATGTGTTCATACCAGTACTTCTaGCCAGGAGCTTCCCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: WLLGTATGHQPHQLLTMCSYQYF*PGASLG Trigger: TCCAAGGGAAGCTCCTGGCAAGAAGTACTGGTATGA...ACACATGGTTAATAATTGATGAGGCTGGTGGCCTGTGGCAGTACCCAGCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR TCA 72 bp | AAGCTACCCACCCTGGGAATGAATGACAGAACTGGTTaGGTGTGCTTTCAAGGAGACCCTGGTCCCACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KLPTLGMNDRTG*VCFQGDPGPTS Trigger: AGAAGTGGGACCAGGGTCTCCTTGAAAGCACACTCAACCAGTTCTGTCATTCATTCCCAGGGTGGGTAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR CCA 72 bp | TTTGTGCTTTCTTTTGGCTTCAGCCTCTGCTCGGGGTaGAAGCCTCCTGCCTGGACCCTAGGGATAAATTAT | + |
|
Preference number: 3 (lower is better) Translates to: FVLSFGFSLCSG*KPPAWTLGINY Trigger: ATAATTTATCCCTAGGGTCCAGGCAGGAGGCTTCCACCCCGAGCAGAGGCTGAAGCCAAAAGAAAGCACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAACTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATCCCAGCAGCCTAGCTTaGAGCCATATTTTCTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PQLTLGSLPRYWGKKAEYPSSLA*SHIFCF Trigger: GAAACAGAAAATATGGCTCAAAGCTAGGCTGCTGGG...ATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAGTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
||
| 3UTR TCA 72 bp | GACAGAAACCAGCTCAAGCTTGAAGCTCTCTGGTTTTaGCTAAGCCAGCTTAAAAGACCTGCCTGCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: DRNQLKLEALWF*LSQLKRPACCQ Trigger: CTGGCAGCAGGCAGGTCTTTTAAGCTGGCTTAGTCAAAACCAGAGAGCTTCAAGCTTGAGCTGGTTTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR GCA 72 bp | TTTTGGCTTCAGCCTCTGCTCGGGGTGGAAGCCTCCTaGCTGGACCCTAGGGATAAATTATACTTCACTAAT | + |
|
Preference number: 3 (lower is better) Translates to: FWLQPLLGVEAS*LDPRDKLYFTN Trigger: ATTAGTGAAGTATAATTTATCCCTAGGGTCCAGGCAGGAGGCTTCCACCCCGAGCAGAGGCTGAAGCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR CCA 72 bp | TTCCCCCAACTCACCCTAGGTTCCTTGCCCAGGTATTaGGGTAAGAAGGCAGAATATACAAGGACCCACTAT | + |
|
Preference number: 3 (lower is better) Translates to: FPQLTLGSLPRY*GKKAEYTRTHY Trigger: ATAGTGGGTCCTTGTATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAGTTGGGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
||
| 3UTR CCA 72 bp | GACTCGCAGAATAGGAAAGAAACAAGGACCAAACCCTaGACCTGTCTGTCTAGCTACAAGCTATTGCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: DSQNRKETRTKP*TCLSSYKLLQD Trigger: ATCTTGCAATAGCTTGTAGCTAGACAGACAGGTCCAGGGTTTGGTCCTTGTTTCTTTCCTATTCTGCGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR-3UTR CAA 90 bp | CTATTGCAAGATACAAGTCTTCACTTTCTGAAATATCTGATAGTCTGTGTTGGAAGCCACCTCACAAACTaGGGGGATGGGCAGGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: LLQDTSLHFLKYLIVCVGSHLTN*GDGQEQ Trigger: TTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCT...TCCAACACAGACTATCAGATATTTCAGAAAGTGAAGACTTGTATCTTGCAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR TCA 72 bp | GCAAGCAGAGAGTTCATTCTTTCCCTCCAGACACATTaGCCTAAAATATACACGGTCTGTTTTTACTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: ASREFILSLQTH*PKIYTVCFYFI Trigger: AATAAAGTAAAAACAGACCGTGTATATTTTAGGTCAATGTGTCTGGAGGGAAAGAATGAACTCTCTGCTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR TCA 72 bp | CTTCACTTTCTGAAATATCTGATAGTCTGTGTTGGATaGTTGGACTACTTTATTCTTCTTGCTGCTGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LHFLKYLIVCVG*LDYFILLAAAS Trigger: TGAAGCAGCAGCAAGAAGAATAAAGTAGTCCAATCATCCAACACAGACTATCAGATATTTCAGAAAGTGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR CCA 72 bp | AAGTCTTCACTTTCTGAAATATCTGATAGTCTGTGTTaGATGATTGGACTACTTTATTCTTCTTGCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: KSSLSEISDSLC*MIGLLYSSCCC Trigger: GCAGCAGCAAGAAGAATAAAGTAGTCCAATCATCCAACACAGACTATCAGATATTTCAGAAAGTGAAGACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTGGCTTCAGCCTCTGCTCGGGGTGGAAGCCTCCTGCCTGGACCCTAGGGTGCCCGGTAGGAGATaGTGCACCGCTGAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FFWLQPLLGVEASCLDPRVPGRR*CTAELP Trigger: GGGCAGCTCAGCGGTGCACCATCTCCTACCGGGCAC...CCTAGGGTCCAGGCAGGAGGCTTCCACCCCGAGCAGAGGCTGAAGCCAAAAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR CAA 72 bp | GAAGGCTTGGCCCAGGCGTCATTGAACACTGAGGATTaGGGAATGGGGGCTGGGCGGGCCCAAAGTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EGLAQASLNTED*GMGAGRAQSSR Trigger: CCGGGAACTTTGGGCCCGCCCAGCCCCCATTCCCAAATCCTCAGTGTTCAATGACGCCTGGGCCAAGCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| CDS-3UTR GCA 90 bp | TTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGCACCCGGTAGGAGATGGTaGACCGCTGAGCTGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPGIQPPHKLGGWAGTRAPGRRW*TAELPS Trigger: ACTGGGCAGCTCAGCGGTGCACCATCTCCTACCGGG...TGCCCTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| CDS-3UTR TCA 90 bp | CTTTCTTTTGGCTTCAGCCTCTGCTCGGGGTGGAAGCCTCCTGCCTGGACCCTAATGCCTCCAACTGACTaGGGAGGACAGGGATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSFGFSLCSGWKPPAWTLMPPTD*GGQGCE Trigger: CTCACATCCCTGTCCTCCTCAGTCAGTTGGAGGCAT...TAGGGTCCAGGCAGGAGGCTTCCACCCCGAGCAGAGGCTGAAGCCAAAAGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| CDS-3UTR GCA 90 bp | TTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGCATGCTGGAAGAGGCGATaGATCTCTGCCTCTCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPGIQPPHKLGGWAGTRACWKRR*ISASRW Trigger: CCAACGAGAGGCAGAGATGCATCGCCTCTTCCAGCA...TGCCCTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| CDS-3UTR CCA 90 bp | CCCCAACTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATGTGCCCGGTAGGAGATaGTGCACCGCTGAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PQLTLGSLPRYWGKKAEYVPGRR*CTAELP Trigger: GGGCAGCTCAGCGGTGCACCATCTCCTACCGGGCAC...ATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAGTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
||
| 3UTR CAA 72 bp | AGACCCGGTGTGCTTCCACCCAGAGGTCACATGGACTaGGCAAACCTGCGGAGCTGGGCTGTTCTAAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RPGVLPPRGHMD*ANLRSWAVLSY Trigger: GTAGCTTAGAACAGCCCAGCTCCGCAGGTTTGCCAAGTCCATGTGACCTCTGGGTGGAAGCACACCGGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| CDS-3UTR TCA 90 bp | CCCCAACTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATGAGATGGTGCACCGCTaGGCTGCCCAGTCCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQLTLGSLPRYWGKKAEYEMVHR*AAQSWN Trigger: GTTCCAGGACTGGGCAGCTCAGCGGTGCACCATCTC...ATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAGTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191108.7 |
||
| CDS-3UTR TCA 90 bp | GGGGATGGGCAGGAACAAGGGCAATCTAGTTGTTTGTGCCACAGCACCTCTGGCACAGTGTACCTTTCTTaGAGAAGGGCAGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDGQEQGQSSCLCHSTSGTVYLS*RRAAAA Trigger: GGCTGCTGCTGCCCTTCTTCAAGAAAGGTACACTGT...GCCAGAGGTGCTGTGGCACAAACAACTAGATTGCCCTTGTTCCTGCCCATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| CDS-3UTR GCA 90 bp | CTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATACAAGGCCCGGTAGGAGATGGTaGACCGCTGAGCTGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGSLPRYWGKKAEYTRPGRRW*TAELPS Trigger: ACTGGGCAGCTCAGCGGTGCACCATCTCCTACCGGG...CCTTGTATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
||
| 3UTR CAA 72 bp | AAAGTCAGGTCGTCTCCCCTCTGTTTGTGCTTTCTTTaGGCTTCAGCCTCTGCTCGGGGTGGAAGCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVRSSPLCLCFL*ASASARGGSLL Trigger: CAGGAGGCTTCCACCCCGAGCAGAGGCTGAAGCCAAAAGAAAGCACAAACAGAGGGGAGACGACCTGACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR CAA 72 bp | GCCCAAAGTTCCCGGGCATACAGCCACCTCACAAACTaGGGGGATGGGCAGGAACAAGGGCAATCTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQSSRAYSHLTN*GDGQEQGQSSC Trigger: ACAACTAGATTGCCCTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTTTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| CDS-3UTR CCA 90 bp | AACTGCTTGAGCCTCTGCTTGTCCCCCTTTCTGCTTTGGCTGCTACCTCCCGCTGTCAGGAAGCTGCCTTaGTCCTTCAGCCTTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: NCLSLCLSPFLLWLLPPAVRKLP*SFSLSI Trigger: GATAGAAAGGCTGAAGGACCAAGGCAGCTTCCTGAC...AGCGGGAGGTAGCAGCCAAAGCAGAAAGGGGGACAAGCAGAGGCTCAAGCAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR CAA 72 bp | GTTTGTGCCACAGCACCTCTGGCAGCTTTGCATAGCTaGCTGTCTATCTTGCTTTCTGGGGCTGGAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VCATAPLAALHS*LSILLSGAGAM Trigger: CATGGCTCCAGCCCCAGAAAGCAAGATAGACAGCAAGCTATGCAAAGCTGCCAGAGGTGCTGTGGCACAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR CAA 72 bp | GTTTCTTGTCCCCTTTGTAACTGCTTGAGCCTCTGCTaGTCCCCCTTTCTGCTTTGGCTGCTACCTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSCPLCNCLSLC*SPFLLWLLPPA Trigger: AGCGGGAGGTAGCAGCCAAAGCAGAAAGGGGGACAAGCAGAGGCTCAAGCAGTTACAAAGGGGACAAGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| CDS-3UTR GCA 90 bp | CCCCAACTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATTGCTGGAAGAGGCGATaGATCTCTGCCTCTCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQLTLGSLPRYWGKKAEYCWKRR*ISASRW Trigger: CCAACGAGAGGCAGAGATGCATCGCCTCTTCCAGCA...ATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAGTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
||
| CDS-3UTR CCA 90 bp | CCCCAACTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATCGTTGGGCTTCTTCCTaGTCTTGCTGCTCATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PQLTLGSLPRYWGKKAEYRWASS*SCCSWH Trigger: GTGCCATGAGCAGCAAGACCAGGAAGAAGCCCAACG...ATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAGTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
||
| CDS-3UTR GCA 90 bp | CTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATACAAGGTCTTCCTGGTCTTGCTaGTCATGGCACAGGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGSLPRYWGKKAEYTRSSWSC*SWHRIR Trigger: GCGGATCCTGTGCCATGAGCAGCAAGACCAGGAAGA...CCTTGTATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
||
| CDS-3UTR GCA 90 bp | ATTGGGGTAAGAAGGCAGAATATACAAGGACCCACTATCCTTGCCACTAGCTGTGGTGCACCGCTGAGCTaGCCAGTCCTGGAACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IGVRRQNIQGPTILATSCGAPLS*PVLEQC Trigger: ACACTGTTCCAGGACTGGGCAGCTCAGCGGTGCACC...ACAGCTAGTGGCAAGGATAGTGGGTCCTTGTATATTCTGCCTTCTTACCCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191108.7 |
||
| CDS-3UTR TCA 90 bp | TGGCTGCTGGGTACTGCCACAGGCCACCAGCCTCATCAATTATTAACCATGTGTCTAGGTCCACATAGCTaGATCCACCTTCCCCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: WLLGTATGHQPHQLLTMCLGPHS*IHLPPI Trigger: AATTGGGGGAAGGTGGATTCAGCTATGTGGACCTAG...ACACATGGTTAATAATTGATGAGGCTGGTGGCCTGTGGCAGTACCCAGCAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR CAA 72 bp | TTGAGTGTGCTTTCAAGGAGACCCTGGTCCCACTTCTaGGCACAGACAGAAACCAGCTCAAGCTTGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSVLSRRPWSHF*AQTETSSSLKL Trigger: GAGCTTCAAGCTTGAGCTGGTTTCTGTCTGTGCCAAGAAGTGGGACCAGGGTCTCCTTGAAAGCACACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR CAA 72 bp | TTCTTGCTGCTGCTTCACTCAACAGCTCTAGAAGGCTaGGCCCAGGCGTCATTGAACACTGAGGATTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLLLLHSTALEG*AQASLNTEDLG Trigger: TCCCAAATCCTCAGTGTTCAATGACGCCTGGGCCAAGCCTTCTAGAGCTGTTGAGTGAAGCAGCAGCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR CAA 72 bp | TCTCCTTGCATGGTTTCTTGTCCCCTTTGTAACTGCTaGAGCCTCTGCTTGTCCCCCTTTCTGCTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPCMVSCPLCNC*SLCLSPFLLWL Trigger: CAGCCAAAGCAGAAAGGGGGACAAGCAGAGGCTCAAGCAGTTACAAAGGGGACAAGAAACCATGCAAGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| CDS-3UTR TCA 90 bp | CAAGGACCAAACCCTGGACCTGTCTGTCTAGCTACAAGCTATTGCAAGATACAACAGTCCGCTCATCGATaGCACAGTGGCTTTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QGPNPGPVCLATSYCKIQQSAHR*HSGFAQ Trigger: CTGTGCAAAGCCACTGTGTCATCGATGAGCGGACTG...TTGTATCTTGCAATAGCTTGTAGCTAGACAGACAGGTCCAGGGTTTGGTCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| CDS-3UTR GCA 90 bp | CAAGGACCAAACCCTGGACCTGTCTGTCTAGCTACAAGCTATTGCAAGATACAATCTTCCTGGTCTTGCTaGTCATGGCACAGGATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QGPNPGPVCLATSYCKIQSSWSC*SWHRIR Trigger: GCGGATCCTGTGCCATGAGCAGCAAGACCAGGAAGA...TTGTATCTTGCAATAGCTTGTAGCTAGACAGACAGGTCCAGGGTTTGGTCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| CDS-3UTR GCA 90 bp | CTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATACAAGGCTTCAGTCAGGAAGCTaGCTTGGTCCTTCAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGSLPRYWGKKAEYTRLQSGS*LGPSAF Trigger: AAAGGCTGAAGGACCAAGGCAGCTTCCTGACTGAAG...CCTTGTATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
||
| CDS-3UTR TCA 90 bp | GGAGACAGAATGAGATGTGCACCCAGCAGCCTAGCTTTGAGCCATATTTTCTGTCTAGGTCCACATAGCTaGATCCACCTTCCCCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: GDRMRCAPSSLALSHIFCLGPHS*IHLPPI Trigger: AATTGGGGGAAGGTGGATTCAGCTATGTGGACCTAG...ACAGAAAATATGGCTCAAAGCTAGGCTGCTGGGTGCACATCTCATTCTGTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
||
| CDS-3UTR TCA 90 bp | ATTGGGGTAAGAAGGCAGAATATACAAGGACCCACTATCCTTGCCACTAGCTGTACAGTGTACCTTTCTTaGAGAAGGGCAGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGVRRQNIQGPTILATSCTVYLS*RRAAAA Trigger: GGCTGCTGCTGCCCTTCTTCAAGAAAGGTACACTGT...ACAGCTAGTGGCAAGGATAGTGGGTCCTTGTATATTCTGCCTTCTTACCCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
||
| CDS-3UTR GCA 90 bp | CTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATACAAGGCTTCAGGTCCCTGTGTaGATAACCTTTGGCATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGSLPRYWGKKAEYTRLQVPV*ITFGMN Trigger: ATTCATGCCAAAGGTTATGCACACAGGGACCTGAAG...CCTTGTATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
||
| CDS-3UTR CCA 90 bp | ATTGGGGTAAGAAGGCAGAATATACAAGGACCCACTATCCTTGCCACTAGCTGTGTCAGGAAGCTGCCTTaGTCCTTCAGCCTTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: IGVRRQNIQGPTILATSCVRKLP*SFSLSI Trigger: GATAGAAAGGCTGAAGGACCAAGGCAGCTTCCTGAC...ACAGCTAGTGGCAAGGATAGTGGGTCCTTGTATATTCTGCCTTCTTACCCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
||
| CDS-3UTR CCA 90 bp | CAAGGACCAAACCCTGGACCTGTCTGTCTAGCTACAAGCTATTGCAAGATACAACACCAAGCAAAATATTaGTGGGCTTCAGGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGPNPGPVCLATSYCKIQHQAKY*WASGPC Trigger: ACAGGGACCTGAAGCCCACCAATATTTTGCTTGGTG...TTGTATCTTGCAATAGCTTGTAGCTAGACAGACAGGTCCAGGGTTTGGTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| CDS-3UTR GCA 90 bp | AATTATACTTCACTAATAGGCACCCTAGGACTCATGTTGACGTCAGCATGTAGGAGCAGCCAGGCTTCATaGTTAGCACCTCGTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NYTSLIGTLGLMLTSACRSSQAS*LAPRSF Trigger: GAAAGAACGAGGTGCTAAGCATGAAGCCTGGCTGCT...CCTACATGCTGACGTCAACATGAGTCCTAGGGTGCCTATTAGTGAAGTATAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
||
| 3UTR CAA 72 bp | AGACATCATACCAGTACTTCTTGCCAGGAGCTTCCCTaGGAAATAGCAAGCAGAGAGTTCATTCTTTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RHHTSTSCQELP*EIASREFILSL Trigger: GAGGGAAAGAATGAACTCTCTGCTTGCTATTTCCAAGGGAAGCTCCTGGCAAGAAGTACTGGTATGATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| CDS-3UTR GCA 90 bp | GGAGACAGAATGAGATGTGCACCCAGCAGCCTAGCTTTGAGCCATATTTTCTGTCTCCACTTGAATGCATaGTTGATTCATAGAACCCAA | + |
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Preference number: 4 (lower is better) Translates to: GDRMRCAPSSLALSHIFCLHLNA*LIHRTQ Trigger: TTGGGTTCTATGAATCAAGCATGCATTCAAGTGGAG...ACAGAAAATATGGCTCAAAGCTAGGCTGCTGGGTGCACATCTCATTCTGTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
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| 3UTR CAA 72 bp | AATTATACTTCACTAATAGGCACCCTAGGACTCATGTaGACGTCAGCATGTAGGGGTGGAATCTCCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: NYTSLIGTLGLM*TSACRGGISRT Trigger: TGTTCTGGAGATTCCACCCCTACATGCTGACGTCAACATGAGTCCTAGGGTGCCTATTAGTGAAGTATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| CDS-3UTR GCA 90 bp | AATTATACTTCACTAATAGGCACCCTAGGACTCATGTTGACGTCAGCATGTAGGCTTCAGGTCCCTGTGTaGATAACCTTTGGCATGAAT | + |
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Preference number: 4 (lower is better) Translates to: NYTSLIGTLGLMLTSACRLQVPV*ITFGMN Trigger: ATTCATGCCAAAGGTTATGCACACAGGGACCTGAAG...CCTACATGCTGACGTCAACATGAGTCCTAGGGTGCCTATTAGTGAAGTATAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| CDS-3UTR GCA 90 bp | CAAGGACCAAACCCTGGACCTGTCTGTCTAGCTACAAGCTATTGCAAGATACAACTCCACTTGAATGCATaGTTGATTCATAGAACCCAA | + |
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Preference number: 4 (lower is better) Translates to: QGPNPGPVCLATSYCKIQLHLNA*LIHRTQ Trigger: TTGGGTTCTATGAATCAAGCATGCATTCAAGTGGAG...TTGTATCTTGCAATAGCTTGTAGCTAGACAGACAGGTCCAGGGTTTGGTCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| CDS-3UTR GCA 90 bp | AGTTCATTCTTTCCCTCCAGACACATTGACCTAAAATATACACGGTCTGTTTTTCGCAATGCTGAAGAATaGCTGGGGCTTTGTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: SSFFPSRHIDLKYTRSVFRNAEE*LGLCGM Trigger: CATCCCACAAAGCCCCAGGCATTCTTCAGCATTGCG...AAAAACAGACCGTGTATATTTTAGGTCAATGTGTCTGGAGGGAAAGAATGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| CDS-3UTR CCA 90 bp | CTATTGCAAGATACAAGTCTTCACTTTCTGAAATATCTGATAGTCTGTGTTGGACGTTGGGCTTCTTCCTaGTCTTGCTGCTCATGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LLQDTSLHFLKYLIVCVGRWASS*SCCSWH Trigger: GTGCCATGAGCAGCAAGACCAGGAAGAAGCCCAACG...TCCAACACAGACTATCAGATATTTCAGAAAGTGAAGACTTGTATCTTGCAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| CDS-3UTR GCA 90 bp | AGTTCATTCTTTCCCTCCAGACACATTGACCTAAAATATACACGGTCTGTTTTTCTTCAGTCAGGAAGCTaGCTTGGTCCTTCAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: SSFFPSRHIDLKYTRSVFLQSGS*LGPSAF Trigger: AAAGGCTGAAGGACCAAGGCAGCTTCCTGACTGAAG...AAAAACAGACCGTGTATATTTTAGGTCAATGTGTCTGGAGGGAAAGAATGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| 3UTR CAA 72 bp | ACCAAACCCTGGACCTGTCTGTCTAGCTACAAGCTATaGCAAGATACAAGTCTTCACTTTCTGAAATATCTG | + |
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Preference number: 4 (lower is better) Translates to: TKPWTCLSSYKL*QDTSLHFLKYL Trigger: CAGATATTTCAGAAAGTGAAGACTTGTATCTTGCAATAGCTTGTAGCTAGACAGACAGGTCCAGGGTTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| CDS-3UTR CAA 90 bp | TTCTTTTGGCTTCAGCCTCTGCTCGGGGTGGAAGCCTCCTGCCTGGACCCTAGGCACAGTGTACCTTTCTaGAAGAAGGGCAGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: FFWLQPLLGVEASCLDPRHSVPF*KKGSSS Trigger: GCTGCTGCTGCCCTTCTTCAAGAAAGGTACACTGTG...CCTAGGGTCCAGGCAGGAGGCTTCCACCCCGAGCAGAGGCTGAAGCCAAAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| CDS-3UTR CAA 90 bp | TTCTTTTGGCTTCAGCCTCTGCTCGGGGTGGAAGCCTCCTGCCTGGACCCTAGGAGTCAGGAAGCTGCCTaGGTCCTTCAGCCTTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: FFWLQPLLGVEASCLDPRSQEAA*VLQPFY Trigger: ATAGAAAGGCTGAAGGACCAAGGCAGCTTCCTGACT...CCTAGGGTCCAGGCAGGAGGCTTCCACCCCGAGCAGAGGCTGAAGCCAAAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| CDS-3UTR CAA 90 bp | GGAGACAGAATGAGATGTGCACCCAGCAGCCTAGCTTTGAGCCATATTTTCTGTCATCTCTGCCTCTCGTaGGGCTTCTTCCTGGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: GDRMRCAPSSLALSHIFCHLCLS*GFFLVL Trigger: CAAGACCAGGAAGAAGCCCAACGAGAGGCAGAGATG...ACAGAAAATATGGCTCAAAGCTAGGCTGCTGGGTGCACATCTCATTCTGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
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| CDS-3UTR CAA 90 bp | CTCACCCTAGGTTCCTTGCCCAGGTATTGGGGTAAGAAGGCAGAATATACAAGGCACAGTGTACCTTTCTaGAAGAAGGGCAGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LTLGSLPRYWGKKAEYTRHSVPF*KKGSSS Trigger: GCTGCTGCTGCCCTTCTTCAAGAAAGGTACACTGTG...CCTTGTATATTCTGCCTTCTTACCCCAATACCTGGGCAAGGAACCTAGGGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
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| CDS-3UTR CAA 90 bp | AAGTTCCCGGGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGCACTTGAATGCATGCTaGATTCATAGAACCCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: KFPGIQPPHKLGGWAGTRHLNAC*IHRTQV Trigger: GACTTGGGTTCTATGAATCAAGCATGCATTCAAGTG...CCTTGTTCCTGCCCATCCCCCAAGTTTGTGAGGTGGCTGTATGCCCGGGAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| CDS-3UTR CAA 90 bp | GGAGACAGAATGAGATGTGCACCCAGCAGCCTAGCTTTGAGCCATATTTTCTGTAGTCAGGAAGCTGCCTaGGTCCTTCAGCCTTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: GDRMRCAPSSLALSHIFCSQEAA*VLQPFY Trigger: ATAGAAAGGCTGAAGGACCAAGGCAGCTTCCTGACT...ACAGAAAATATGGCTCAAAGCTAGGCTGCTGGGTGCACATCTCATTCTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
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| CDS-3UTR CAA 90 bp | GGAGACAGAATGAGATGTGCACCCAGCAGCCTAGCTTTGAGCCATATTTTCTGTGCGAGAGCCCTCCACTaGAATGCATGCTTGATTCAT | + |
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Preference number: 5 (lower is better) Translates to: GDRMRCAPSSLALSHIFCARALH*NACLIH Trigger: ATGAATCAAGCATGCATTCAAGTGGAGGGCTCTCGC...ACAGAAAATATGGCTCAAAGCTAGGCTGCTGGGTGCACATCTCATTCTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
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| CDS-3UTR CAA 90 bp | CAAGGACCAAACCCTGGACCTGTCTGTCTAGCTACAAGCTATTGCAAGATACAAGCGAGAGCCCTCCACTaGAATGCATGCTTGATTCAT | + |
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Preference number: 5 (lower is better) Translates to: QGPNPGPVCLATSYCKIQARALH*NACLIH Trigger: ATGAATCAAGCATGCATTCAAGTGGAGGGCTCTCGC...TTGTATCTTGCAATAGCTTGTAGCTAGACAGACAGGTCCAGGGTTTGGTCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027401.11 |
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| CDS-3UTR CAA 90 bp | ATTGGGGTAAGAAGGCAGAATATACAAGGACCCACTATCCTTGCCACTAGCTGTCACTTGAATGCATGCTaGATTCATAGAACCCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: IGVRRQNIQGPTILATSCHLNAC*IHRTQV Trigger: GACTTGGGTTCTATGAATCAAGCATGCATTCAAGTG...ACAGCTAGTGGCAAGGATAGTGGGTCCTTGTATATTCTGCCTTCTTACCCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027401.11 ENSMUST00000191108.7 |
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| CDS CCA 72 bp | GGATGCTGGAAGAGGCGATGCATCTCTGCCTCTCGTTaGGCTTCTTCCTGGTCTTGCTGCTCATGGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: GCWKRRCISASR*ASSWSCCSWHR Trigger: CCTGTGCCATGAGCAGCAAGACCAGGAAGAAGCCCAACGAGAGGCAGAGATGCATCGCCTCTTCCAGCATCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027401.11 ENSMUST00000123825.8 ENSMUST00000144355.8 ENSMUST00000189698.7 ENSMUST00000191108.7 |
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| CDS CAA 72 bp | GGGATGCTGGAAGAGGCGATGCATCTCTGCCTCTCGTaGGGCTTCTTCCTGGTCTTGCTGCTCATGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: GMLEEAMHLCLS*GFFLVLLLMAQ Trigger: CTGTGCCATGAGCAGCAAGACCAGGAAGAAGCCCAACGAGAGGCAGAGATGCATCGCCTCTTCCAGCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027401.11 ENSMUST00000123825.8 ENSMUST00000144355.8 ENSMUST00000189698.7 ENSMUST00000191108.7 |
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| CDS CAA 72 bp | CAGCGGCAGGATCTGGTCTTCAGTCAGGAAGCTGCCTaGGTCCTTCAGCCTTTCTATCTCATTCCACAGTGT | + |
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Preference number: 6 (lower is better) Translates to: QRQDLVFSQEAA*VLQPFYLIPQC Trigger: ACACTGTGGAATGAGATAGAAAGGCTGAAGGACCAAGGCAGCTTCCTGACTGAAGACCAGATCCTGCCGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027401.11 ENSMUST00000189698.7 ENSMUST00000191108.7 |
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| CDS CAA 72 bp | ATGTTTATGTTTGCCTGCCCAGAGCCTCTGGTGGGGTaGCACAATGTTACAATCCCCTCTGTAAGTACAGGC | + |
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Preference number: 6 (lower is better) Translates to: MFMFACPEPLVG*HNVTIPSVSTG Trigger: GCCTGTACTTACAGAGGGGATTGTAACATTGTGCAACCCCACCAGAGGCTCTGGGCAGGCAAACATAAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123825.8 ENSMUST00000144355.8 |
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