RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STK10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020272

Ensembl transcript IDs: ENSMUST00000102821.4

Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCCTGAAAGCAAGTATCCCTGCCCGGCCTCCTGTGGCGTGGCCTaGCCCATCTGCCCTCTGAGTCAACTCCTTGATGTGAGGCCTGAA +
Preference number: 1 (lower is better)
Translates to: SPESKYPCPASCGVA*PICPLSQLLDVRPE
Trigger: TTCAGGCCTCACATCAAGGAGTTGACTCAGAGGGCAGATGGGCCAGGCCACGCCACAGGAGGCCGGGCAGGGATACTTGCTTTCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR GCA 90 bp CAGTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATaGATTGGTCCTAGGAGGTCACAGCAGAGGCAGCCTGGGTGGTGT +
Preference number: 1 (lower is better)
Translates to: QWPWIRLRRQASRFQ*IGPRRSQQRQPGWC
Trigger: ACACCACCCAGGCTGCCTCTGCTGTGACCTCCTAGGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR GCA 90 bp TTTTGCCTAATAGCCACTGTCAAGTCCCCTGAAAGCAAGTATCCCTaGCCGGCCTCCTGTGGCGTGGCCTGGCCCATCTGCCCTCTGAGT +
Preference number: 1 (lower is better)
Translates to: FCLIATVKSPESKYP*PASCGVAWPICPLS
Trigger: ACTCAGAGGGCAGATGGGCCAGGCCACGCCACAGGAGGCCGGGCAGGGATACTTGCTTTCAGGGGACTTGACAGTGGCTATTAGGCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR CCA 90 bp GTGCACCAAGGTGGCACTGTGGACAACTGGGGCGCTGCAGGGGGATaGGTAATTGAGCTGGCACAGAAGCAAGAGGAAGAGGTCCTGAGT +
Preference number: 1 (lower is better)
Translates to: VHQGGTVDNWGAAGG*VIELAQKQEEEVLS
Trigger: ACTCAGGACCTCTTCCTCTTGCTTCTGTGCCAGCTCAATTACCCATCCCCCTGCAGCGCCCCAGTTGTCCACAGTGCCACCTTGGTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR TCA 90 bp GAAGTCAAAAGCCTTCCTGGGTACCTGCAGACAAGCGGGCAAGGGTaGGATTGGCACGTGCTAGGCAGCAGAAGTCAAGTGTGGAGGGGG +
Preference number: 1 (lower is better)
Translates to: EVKSLPGYLQTSGQG*DWHVLGSRSQVWRG
Trigger: CCCCCTCCACACTTGACTTCTGCTGCCTAGCACGTGCCAATCTCACCCTTGCCCGCTTGTCTGCAGGTACCCAGGAAGGCTTTTGACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR TCA 90 bp GCCCAGTCATGGAGGCTCCACATTTCCCTGAGCGCAGCATGTTCCTaGGGGTGGGGAACAGTTCTTCCTGAACAGAGAAGTCCAAAGCTT +
Preference number: 1 (lower is better)
Translates to: AQSWRLHISLSAACS*GWGTVLPEQRSPKL
Trigger: AAGCTTTGGACTTCTCTGTTCAGGAAGAACTGTTCCCCACCCTCAGGAACATGCTGCGCTCAGGGAAATGTGGAGCCTCCATGACTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR GCA 90 bp GCCTGTTCCTATACAGAAAAGATTAGCACAGGGCATGAGGAATACTaGGTGGGCCCTTGGTGGTGGCAGGCATTGCACTTACGCTATAAT +
Preference number: 1 (lower is better)
Translates to: ACSYTEKISTGHEEY*VGPWWWQALHLRYN
Trigger: ATTATAGCGTAAGTGCAATGCCTGCCACCACCAAGGGCCCACGCAGTATTCCTCATGCCCTGTGCTAATCTTTTCTGTATAGGAACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR CCA 90 bp GTTCCTATACAGAAAAGATTAGCACAGGGCATGAGGAATACTGCGTaGGCCCTTGGTGGTGGCAGGCATTGCACTTACGCTATAATTATG +
Preference number: 1 (lower is better)
Translates to: VPIQKRLAQGMRNTA*ALGGGRHCTYAIIM
Trigger: CATAATTATAGCGTAAGTGCAATGCCTGCCACCACCAAGGGCCCACGCAGTATTCCTCATGCCCTGTGCTAATCTTTTCTGTATAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTaGATGTCTCACAGGGAGAGGAAAATAAGATGGGATACAATGTCA +
Preference number: 1 (lower is better)
Translates to: CVCVCVCVCVCVCVY*MSHRERKIRWDTMS
Trigger: TGACATTGTATCCCATCTTATTTTCCTCTCCCTGTGAGACATGCAATACACACACACACACACACACACACACACACACACACACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR GCA 90 bp TTTGTTTGCAGAGAACAGTTTACAAATATCCACGGTGCTTGGAAATaGATACACGTTATTTCCATCCTTCATGAAGGGAAATATAAGTTA +
Preference number: 1 (lower is better)
Translates to: FVCREQFTNIHGAWK*IHVISILHEGKYKL
Trigger: TAACTTATATTTCCCTTCATGAAGGATGGAAATAACGTGTATGCATTTCCAAGCACCGTGGATATTTGTAAACTGTTCTCTGCAAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR CAA 90 bp GGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATaGGTCCTAGGAGGTCACAGCAGAGGCAGCCTGGGTGGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: GPGSGSGGKQAGSNA*VLGGHSRGSLGGVR
Trigger: CCTGACACCACCCAGGCTGCCTCTGCTGTGACCTCCTAGGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR CAA 90 bp ACAGAAGCAAGAGGAAGAGGTCCTGAGTCACTTGTTCATAGAGGCTaGGGGGCCCCAGTAGCCACGCTGCCCACCGCAGCCCAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: TEARGRGPESLVHRG*GAPVATLPTAAQAC
Trigger: ACAAGCCTGGGCTGCGGTGGGCAGCGTGGCTACTGGGGCCCCCAAGCCTCTATGAACAAGTGACTCAGGACCTCTTCCTCTTGCTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR CAA 90 bp GTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTaGGGAGGCTACCTGAGCAGCCCGAAGGCCCAGTCATGGAGGCTC +
Preference number: 2 (lower is better)
Translates to: VTEHLGCFSSMGLSL*GGYLSSPKAQSWRL
Trigger: GAGCCTCCATGACTGGGCCTTCGGGCTGCTCAGGTAGCCTCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR-3UTR CCA 90 bp TCAGTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTTCACCCATCCTGCCTaGCCCCTGACCTCAACAGTC +
Preference number: 2 (lower is better)
Translates to: SVALDQAQEASKQVPMHWFTHPA*PLTSTV
Trigger: GACTGTTGAGGTCAGGGGCCAGGCAGGATGGGTGAA...CCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR-3UTR GCA 90 bp GTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAGGCCTGCTCCACCTGACATaGTCAGTGGCCCTGGATCAG +
Preference number: 2 (lower is better)
Translates to: VTEHLGCFSSMGLSLLGGLLHLT*SVALDQ
Trigger: CTGATCCAGGGCCACTGAGCATGTCAGGTGGAGCAG...GCCTCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR-3UTR CCA 90 bp GTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAGGCCCGAAGGCCCAGTCATaGAGGCTCCACATTTCCCTG +
Preference number: 2 (lower is better)
Translates to: VTEHLGCFSSMGLSLLGGPKAQS*RLHISL
Trigger: CAGGGAAATGTGGAGCCTCCATGACTGGGCCTTCGG...GCCTCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR-3UTR CCA 90 bp ACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAACCAAGGTGGCACTGTaGACAACTGGGGCGCTGCAG +
Preference number: 2 (lower is better)
Translates to: TVTEHLGCFSSMGLSLLGTKVAL*TTGALQ
Trigger: CTGCAGCGCCCCAGTTGTCCACAGTGCCACCTTGGT...TCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR-3UTR GCA 90 bp AAAATAAGATGGGATACAATGTCAGAATCAGCAGAACAGGCATCTCTGGCATCCGGGGTTCACCCATCCTaGCTGGCCCCTGACCTCAAC +
Preference number: 2 (lower is better)
Translates to: KIRWDTMSESAEQASLASGVHPS*LAPDLN
Trigger: GTTGAGGTCAGGGGCCAGGCAGGATGGGTGAACCCC...GGATGCCAGAGATGCCTGTTCTGCTGATTCTGACATTGTATCCCATCTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR-3UTR CCA 90 bp CCTCTTGGGAGGCTACCTGAGCAGCCCGAAGGCCCAGTCATGGAGGCTCCACATGAGAGGAAAATAAGATaGGATACAATGTCAGAATCA +
Preference number: 2 (lower is better)
Translates to: PLGRLPEQPEGPVMEAPHERKIR*DTMSES
Trigger: TGATTCTGACATTGTATCCCATCTTATTTTCCTCTC...ATGTGGAGCCTCCATGACTGGGCCTTCGGGCTGCTCAGGTAGCCTCCCAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR-3UTR TCA 90 bp GTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAGGCACTGTGAGGAATTACTaGAGGCAAACAAACAAACAG +
Preference number: 2 (lower is better)
Translates to: VTEHLGCFSSMGLSLLGGTVRNY*RQTNKQ
Trigger: CTGTTTGTTTGTTTGCCTTCAGTAATTCCTCACAGT...GCCTCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR-3UTR TCA 90 bp ACTCCCTCCCAAGCACCCAGTTTTCATTTGAGGAAACTTTTTAGAAAGTTGCTTCTGTGTGCAGCCAAATaGGTTGCAGGCTGGCAGTAC +
Preference number: 2 (lower is better)
Translates to: TPSQAPSFHLRKLFRKLLLCAAK*VAGWQY
Trigger: GTACTGCCAGCCTGCAACTCATTTGGCTGCACACAG...AAGCAACTTTCTAAAAAGTTTCCTCAAATGAAAACTGGGTGCTTGGGAGGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR-3UTR TCA 90 bp GCTTCTTTACTGCACACTAGATCTGGGAGTCCCAAGACCTGTTTTCCTATTTTTGCAAAGTCAGCTATGTaGAACAAGGGAATGGGGACA +
Preference number: 2 (lower is better)
Translates to: ASLLHTRSGSPKTCFPIFAKSAM*NKGMGT
Trigger: TGTCCCCATTCCCTTGTTTCACATAGCTGACTTTGC...AAAAATAGGAAAACAGGTCTTGGGACTCCCAGATCTAGTGTGCAGTAAAGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR GCA 72 bp CCCTGCCCGGCCTCCTGTGGCGTGGCCTGGCCCATCTaGCCTCTGAGTCAACTCCTTGATGTGAGGCCTGAA +
Preference number: 3 (lower is better)
Translates to: PCPASCGVAWPI*PLSQLLDVRPE
Trigger: TTCAGGCCTCACATCAAGGAGTTGACTCAGAGGGCAGATGGGCCAGGCCACGCCACAGGAGGCCGGGCAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR GCA 72 bp ATAGCCACTGTCAAGTCCCCTGAAAGCAAGTATCCCTaGCCGGCCTCCTGTGGCGTGGCCTGGCCCATCTGC +
Preference number: 3 (lower is better)
Translates to: IATVKSPESKYP*PASCGVAWPIC
Trigger: GCAGATGGGCCAGGCCACGCCACAGGAGGCCGGGCAGGGATACTTGCTTTCAGGGGACTTGACAGTGGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR CCA 72 bp AGCAAGTATCCCTGCCCGGCCTCCTGTGGCGTGGCCTaGCCCATCTGCCCTCTGAGTCAACTCCTTGATGTG +
Preference number: 3 (lower is better)
Translates to: SKYPCPASCGVA*PICPLSQLLDV
Trigger: CACATCAAGGAGTTGACTCAGAGGGCAGATGGGCCAGGCCACGCCACAGGAGGCCGGGCAGGGATACTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR CCA 72 bp GGTGGCACTGTGGACAACTGGGGCGCTGCAGGGGGATaGGTAATTGAGCTGGCACAGAAGCAAGAGGAAGAG +
Preference number: 3 (lower is better)
Translates to: GGTVDNWGAAGG*VIELAQKQEEE
Trigger: CTCTTCCTCTTGCTTCTGTGCCAGCTCAATTACCCATCCCCCTGCAGCGCCCCAGTTGTCCACAGTGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR CCA 72 bp GTAGCGCTTGTGCCCACAGACAGTAGAGCTGGTGTTTaGGCAAACAGGAGGGGTTCACCCATCCTGCCTGGC +
Preference number: 3 (lower is better)
Translates to: VALVPTDSRAGV*ANRRGSPILPG
Trigger: GCCAGGCAGGATGGGTGAACCCCTCCTGTTTGCCCAAACACCAGCTCTACTGTCTGTGGGCACAAGCGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR TCA 72 bp GCAAACAGGAGGGGTTCACCCATCCTGCCTGGCCCCTaGCCTCAACAGTCTAAATCACTCCTAGGTGATGGG +
Preference number: 3 (lower is better)
Translates to: ANRRGSPILPGP*PQQSKSLLGDG
Trigger: CCCATCACCTAGGAGTGATTTAGACTGTTGAGGTCAGGGGCCAGGCAGGATGGGTGAACCCCTCCTGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR TCA 72 bp TGTACCCCTGAACACGGGATCCTGTGTGCAGCCAAATaGGTTGCAGGCTGGCAGTACAGCCTGTGCCTTCTC +
Preference number: 3 (lower is better)
Translates to: CTPEHGILCAAK*VAGWQYSLCLL
Trigger: GAGAAGGCACAGGCTGTACTGCCAGCCTGCAACTCATTTGGCTGCACACAGGATCCCGTGTTCAGGGGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR GCA 72 bp CTGGTGTTTGGGCAAACAGGAGGGGTTCACCCATCCTaGCTGGCCCCTGACCTCAACAGTCTAAATCACTCC +
Preference number: 3 (lower is better)
Translates to: LVFGQTGGVHPS*LAPDLNSLNHS
Trigger: GGAGTGATTTAGACTGTTGAGGTCAGGGGCCAGGCAGGATGGGTGAACCCCTCCTGTTTGCCCAAACACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR GCA 72 bp TGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATaGATTGGTCCTAGGAGGTCACAGCAGAGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: WIRLRRQASRFQ*IGPRRSQQRQP
Trigger: AGGCTGCCTCTGCTGTGACCTCCTAGGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR TCA 72 bp CCCTACCCCGACATACACAAAGCAAAGTCAGCTATGTaGAACAAGGGAATGGGGACACCCGGGAGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: PYPDIHKAKSAM*NKGMGTPGSWL
Trigger: CAGCCAGCTCCCGGGTGTCCCCATTCCCTTGTTTCACATAGCTGACTTTGCTTTGTGTATGTCGGGGTAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR TCA 72 bp TGGAGGCTCCACATTTCCCTGAGCGCAGCATGTTCCTaGGGGTGGGGAACAGTTCTTCCTGAACAGAGAAGT +
Preference number: 3 (lower is better)
Translates to: WRLHISLSAACS*GWGTVLPEQRS
Trigger: ACTTCTCTGTTCAGGAAGAACTGTTCCCCACCCTCAGGAACATGCTGCGCTCAGGGAAATGTGGAGCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR-3UTR CAA 90 bp GCTTCTTTACTGCACACTAGATCTGGGAGTCCCAAGACCTGTTTTCCTATTTTTATGGGGCTCAGCCTCTaGGGAGGCTACCTGAGCAGC +
Preference number: 3 (lower is better)
Translates to: ASLLHTRSGSPKTCFPIFMGLSL*GGYLSS
Trigger: GCTGCTCAGGTAGCCTCCCAAGAGGCTGAGCCCCAT...AAAAATAGGAAAACAGGTCTTGGGACTCCCAGATCTAGTGTGCAGTAAAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR TCA 72 bp TGTCTGAGGCAGCCAGCCATTTGCCTGTACTGTAACTaGGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAG +
Preference number: 3 (lower is better)
Translates to: CLRQPAICLYCN*ALRLLFFYGAQ
Trigger: CTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGTACAGGCAAATGGCTGGCTGCCTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR TCA 72 bp ACGAATGATGTCAGGGAGCGGTCAAAGACTGTTATATaGACCACAAAACTAGCATTTTGCCTAATAGCCACT +
Preference number: 3 (lower is better)
Translates to: TNDVRERSKTVI*TTKLAFCLIAT
Trigger: AGTGGCTATTAGGCAAAATGCTAGTTTTGTGGTTCATATAACAGTCTTTGACCGCTCCCTGACATCATTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR TCA 72 bp CTCTTAGGGATGTTTCCCGACACTGTGAGGAATTACTaGAGGCAAACAAACAAACAGACAAACAAACAAAAA +
Preference number: 3 (lower is better)
Translates to: LLGMFPDTVRNY*RQTNKQTNKQK
Trigger: TTTTTGTTTGTTTGTCTGTTTGTTTGTTTGCCTTCAGTAATTCCTCACAGTGTCGGGAAACATCCCTAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR GCA 72 bp AGAGAACAGTTTACAAATATCCACGGTGCTTGGAAATaGATACACGTTATTTCCATCCTTCATGAAGGGAAA +
Preference number: 3 (lower is better)
Translates to: REQFTNIHGAWK*IHVISILHEGK
Trigger: TTTCCCTTCATGAAGGATGGAAATAACGTGTATGCATTTCCAAGCACCGTGGATATTTGTAAACTGTTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR CCA 72 bp GTTTGCAGAGAACAGTTTACAAATATCCACGGTGCTTaGAAATGCATACACGTTATTTCCATCCTTCATGAA +
Preference number: 3 (lower is better)
Translates to: VCREQFTNIHGA*KCIHVISILHE
Trigger: TTCATGAAGGATGGAAATAACGTGTATGCATTTCCAAGCACCGTGGATATTTGTAAACTGTTCTCTGCAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp GTACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCGCAGCTGTGCAGCACTaGGCCGGGTTTCTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: VQPVPSLGSGASTQHGPTAAVQH*AGFLGS
Trigger: AGAACCCAGAAACCCGGCCCAGTGCTGCACAGCTGC...GGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GTACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCCTGCTGACGAAGGGATaGTGCAGCAGCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VQPVPSLGSGASTQHGPTLLTKG*CSSCAA
Trigger: TGCTGCACAGCTGCTGCAGCATCCCTTCGTCAGCAG...GGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GTACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCCTTGGAGAGCCCATCTaGAGGGCTGGTGGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VQPVPSLGSGASTQHGPTLGEPI*RAGGLE
Trigger: CTCCAAACCACCAGCCCTGCAGATGGGCTCTCCAAG...GGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GGCACTGTGGACAACTGGGGCGCTGCAGGGGGATGGGTAATTGAGCTGGCACAGTGGCCATGCGCGTCTTaGCGTCGCTCCTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: GTVDNWGAAGGWVIELAQWPCAS*RRSSGS
Trigger: AGATCCAGAGGAGCGACGGCAAGACGCGCATGGCCA...CTGTGCCAGCTCAATTACCCATCCCCCTGCAGCGCCCCAGTTGTCCACAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GTACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCTGTTTCTGCTGCTGCTaGAGCCTCTCCGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VQPVPSLGSGASTQHGPTCFCCC*SLSAFC
Trigger: GCAGAAGGCGGAGAGGCTGCAGCAGCAGCAGAAACA...GGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp GGCACTGTGGACAACTGGGGCGCTGCAGGGGGATGGGTAATTGAGCTGGCACAGGTTGAGCTCGTGGTGTaGGGGCTCGATCTGCGCCAT +
Preference number: 4 (lower is better)
Translates to: GTVDNWGAAGGWVIELAQVELVV*GLDLRH
Trigger: ATGGCGCAGATCGAGCCCCCACACCACGAGCTCAAC...CTGTGCCAGCTCAATTACCCATCCCCCTGCAGCGCCCCAGTTGTCCACAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp CCTCTTGGGAGGCTACCTGAGCAGCCCGAAGGCCCAGTCATGGAGGCTCCACATATGGGGTTGAGCTCGTaGTGTGGGGGCTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: PLGRLPEQPEGPVMEAPHMGLSS*CGGSIC
Trigger: GCAGATCGAGCCCCCACACCACGAGCTCAACCCCAT...ATGTGGAGCCTCCATGACTGGGCCTTCGGGCTGCTCAGGTAGCCTCCCAAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp TACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCACGCTCCTCTGGATCTTaGGTAGCCGCGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: YSLCLLWVLAPALSMAPPRSSGS*VAAPSP
Trigger: AGGAGAAGGCGCGGCTACCCAAGATCCAGAGGAGCG...TGGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR CAA 72 bp AGAGGAAGAGGTCCTGAGTCACTTGTTCATAGAGGCTaGGGGGCCCCAGTAGCCACGCTGCCCACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: RGRGPESLVHRG*GAPVATLPTAA
Trigger: GGCTGCGGTGGGCAGCGTGGCTACTGGGGCCCCCAAGCCTCTATGAACAAGTGACTCAGGACCTCTTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp GTACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCCCATCTCGATCAGCGTaGTGCCCAAGGACCAGATGT +
Preference number: 4 (lower is better)
Translates to: VQPVPSLGSGASTQHGPTPSRSA*CPRTRC
Trigger: ACATCTGGTCCTTGGGCATCACGCTGATCGAGATGG...GGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp TACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCAAGTCCTGAGTGTGGTTaGCCAGGGGCGGAACAGCAT +
Preference number: 4 (lower is better)
Translates to: YSLCLLWVLAPALSMAPPSPECG*PGAEQH
Trigger: ATGCTGTTCCGCCCCTGGTCAACCACACTCAGGACT...TGGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp TACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCAGCCTGTTTTCCGTGGTaGGCTTCCTCATGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: YSLCLLWVLAPALSMAPPACFPW*ASSWPA
Trigger: AGCTGGCCATGAGGAAGCTCACCACGGAAAACAGGC...TGGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp CCTCTTGGGAGGCTACCTGAGCAGCCCGAAGGCCCAGTCATGGAGGCTCCACATTGGCCTTGTAGACTTTaGCGAAGGCGCCGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PLGRLPEQPEGPVMEAPHWPCRL*RRRRLP
Trigger: TGGGAGACGGCGCCTTCGGCAAAGTCTACAAGGCCA...ATGTGGAGCCTCCATGACTGGGCCTTCGGGCTGCTCAGGTAGCCTCCCAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GTACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCACCTGCTGCTTCTGCTaGCGCTCCAGGTTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: VQPVPSLGSGASTQHGPTTCCFC*RSRFSS
Trigger: GCTAGAAAACCTGGAGCGGCAGCAGAAGCAGCAGGT...GGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp CCTCTTGGGAGGCTACCTGAGCAGCCCGAAGGCCCAGTCATGGAGGCTCCACATTTCTCGTGTTTCTGCTaGTGCTGCAGCCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: PLGRLPEQPEGPVMEAPHFSCFC*CCSLSA
Trigger: GGCGGAGAGGCTGCAGCAGCAGCAGAAACACGAGAA...ATGTGGAGCCTCCATGACTGGGCCTTCGGGCTGCTCAGGTAGCCTCCCAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GTACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCTGGTTCTCGTGTTTCTaGTGCTGCTGCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VQPVPSLGSGASTQHGPTWFSCF*CCCSLS
Trigger: GGAGAGGCTGCAGCAGCAGCAGAAACACGAGAACCA...GGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp GTACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCAGCTCTCGGAGCTCCTaGCGCCTGAGAAATCTCATC +
Preference number: 4 (lower is better)
Translates to: VQPVPSLGSGASTQHGPTSSRSS*RLRNLI
Trigger: GATGAGATTTCTCAGGCGCCAGGAGCTCCGAGAGCT...GGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp TACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCATCAGCTGCTCCATCATaGGCTGGTTGTAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: YSLCLLWVLAPALSMAPPSAAPS*AGCSAA
Trigger: TGCAGCGCTACAACCAGCGCATGATGGAGCAGCTGA...TGGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GTACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCTGCCTCTTCTCCTCCTaGTGGGAGAACTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: VQPVPSLGSGASTQHGPTCLFSS*WENCLI
Trigger: GATCAAGCAGTTCTCCCAGCAGGAGGAGAAGAGGCA...GGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp TACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCAGAATTCTGGCATCCATaGACAGTGGCCGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: YSLCLLWVLAPALSMAPPEFWHP*TVAGTS
Trigger: GGAAGTCCCGGCCACTGTCCATGGATGCCAGAATTC...TGGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp TACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCACCTTTTGGGACTTGCTaGCTGCAGGACTCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: YSLCLLWVLAPALSMAPPPFGTC*LQDSGS
Trigger: AGAACCCGAGTCCTGCAGCCAGCAAGTCCCAAAAGG...TGGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp CCTCTTGGGAGGCTACCTGAGCAGCCCGAAGGCCCAGTCATGGAGGCTCCACATGGTCCTCCTTCTGCTTaGCTACAAAGTCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: PLGRLPEQPEGPVMEAPHGPPSA*LQSPGP
Trigger: TGGACCGGGACTTTGTAGCCAAGCAGAAGGAGGACC...ATGTGGAGCCTCCATGACTGGGCCTTCGGGCTGCTCAGGTAGCCTCCCAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp CATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCAAAGTCAGCTATGTGGGACCCGCATGGGGTTaGGCTCGTGGTGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HPSPRSLPRHTQSKVSYVGPAWG*ARGVGA
Trigger: AGCCCCCACACCACGAGCTCAACCCCATGCGGGTCC...CACATAGCTGACTTTGCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp CCTCTTGGGAGGCTACCTGAGCAGCCCGAAGGCCCAGTCATGGAGGCTCCACATTGCTTGCTGCTCAGCTaGGTCTGGTTCCGATGTTCT +
Preference number: 4 (lower is better)
Translates to: PLGRLPEQPEGPVMEAPHCLLLS*VWFRCS
Trigger: AGAACATCGGAACCAGACGCAGCTGAGCAGCAAGCA...ATGTGGAGCCTCCATGACTGGGCCTTCGGGCTGCTCAGGTAGCCTCCCAAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GGCACTGTGGACAACTGGGGCGCTGCAGGGGGATGGGTAATTGAGCTGGCACAGTGTCTGACCTTCAGCTaGTCCATCATGCGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GTVDNWGAAGGWVIELAQCLTFS*SIMRWL
Trigger: CAACCAGCGCATGATGGAGCAGCTGAAGGTCAGACA...CTGTGCCAGCTCAATTACCCATCCCCCTGCAGCGCCCCAGTTGTCCACAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp TCAGTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCTCCCATACATCGTTaGGGTCCAGGTCCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: SVALDQAQEASKQVPMHWSPIHR*GPGPGG
Trigger: TCCGCCGGGACCTGGACCCCAACGATGTATGGGAGA...CCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp GGCACTGTGGACAACTGGGGCGCTGCAGGGGGATGGGTAATTGAGCTGGCACAGGAGGCCCTCTTAGAATaGCTTGGAGTGACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GTVDNWGAAGGWVIELAQEALLE*LGVTEL
Trigger: CAGCTCTGTCACTCCAAGCCATTCTAAGAGGGCCTC...CTGTGCCAGCTCAATTACCCATCCCCCTGCAGCGCCCCAGTTGTCCACAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp CCTCTTGGGAGGCTACCTGAGCAGCCCGAAGGCCCAGTCATGGAGGCTCCACATCGCTGCAGGAAGTACTaGTCCTTCAGTTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PLGRLPEQPEGPVMEAPHRCRKY*SFSCCF
Trigger: GAAGCAGCAACTGAAGGACCAGTACTTCCTGCAGCG...ATGTGGAGCCTCCATGACTGGGCCTTCGGGCTGCTCAGGTAGCCTCCCAAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp GTACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCATAGTCCATGCTCTCTaGGGTAGACAGGTTGCTACA +
Preference number: 4 (lower is better)
Translates to: VQPVPSLGSGASTQHGPTIVHAL*GRQVAT
Trigger: TGTAGCAACCTGTCTACCTCAGAGAGCATGGACTAT...GGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp AACAGGCATCTCTGGCATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCATGCTGCAGCAGCTGTaGAGCACTGGGCCGGGTTTC +
Preference number: 4 (lower is better)
Translates to: NRHLWHPSPRSLPRHTQSMLQQL*STGPGF
Trigger: GAAACCCGGCCCAGTGCTGCACAGCTGCTGCAGCAT...GCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATGCCAGAGATGCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp CCTCTTGGGAGGCTACCTGAGCAGCCCGAAGGCCCAGTCATGGAGGCTCCACATTGTTCCTCCATCTTCTaGTTCATGCTCTCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: PLGRLPEQPEGPVMEAPHCSSIF*FMLSFR
Trigger: GCGGAAGGAGAGCATGAAGCAGAAGATGGAGGAACA...ATGTGGAGCCTCCATGACTGGGCCTTCGGGCTGCTCAGGTAGCCTCCCAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTTACGCAGCAGGTCATaGCGCTGCAGGAAGTACTGG +
Preference number: 4 (lower is better)
Translates to: VALDQAQEASKQVPMHWSLRSRS*RCRKYW
Trigger: CCAGTACTTCCTGCAGCGGCATGACCTGCTGCGTAA...GGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp GTACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCCGGTCTCCTTGTTTTTaGCCTTGTAGACTTTGCCGA +
Preference number: 4 (lower is better)
Translates to: VQPVPSLGSGASTQHGPTRSPCF*PCRLCR
Trigger: TCGGCAAAGTCTACAAGGCCAAAAACAAGGAGACCG...GGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp GTACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCTTGGCTGAGTTACATTaGCAGAGTCCTGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: VQPVPSLGSGASTQHGPTLAELH*QSPECG
Trigger: ACCACACTCAGGACTCTGCCAATGTAACTCAGCCAA...GGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR CAA 72 bp TCCTGGGTACCTGCAGACAAGCGGGCAAGGGTGAGATaGGCACGTGCTAGGCAGCAGAAGTCAAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SWVPADKRARVR*ARARQQKSSVE
Trigger: CTCCACACTTGACTTCTGCTGCCTAGCACGTGCCAATCTCACCCTTGCCCGCTTGTCTGCAGGTACCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
3UTR CAA 72 bp CACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTaGGGAGGCTACCTGAGCAGCCCGAAGGCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: HLGCFSSMGLSL*GGYLSSPKAQS
Trigger: TGACTGGGCCTTCGGGCTGCTCAGGTAGCCTCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp AACAGGCATCTCTGGCATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCCGCTCTTGGTCTCTATaGCTTTGGCTGCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: NRHLWHPSPRSLPRHTQSRSWSL*LWLLPG
Trigger: CCCTGGCAGCAGCCAAAGTCATAGAGACCAAGAGCG...GCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATGCCAGAGATGCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp GGCACTGTGGACAACTGGGGCGCTGCAGGGGGATGGGTAATTGAGCTGGCACAGGGCAGAACTCAATCATaGTCCAGAGCTTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: GTVDNWGAAGGWVIELAQGRTQS*SRASHH
Trigger: ATGATGGGAAGCTCTGGATCATGATTGAGTTCTGCC...CTGTGCCAGCTCAATTACCCATCCCCCTGCAGCGCCCCAGTTGTCCACAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp GTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAGGCCCGACTTGGCAATCTTaGGCAGGACCCGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: VTEHLGCFSSMGLSLLGGPTWQS*AGPAWG
Trigger: ACCCCATGCGGGTCCTGCTCAAGATTGCCAAGTCGG...GCCTCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCAAACGTTTGTGCATCTaGTCCAGCTGCAGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: VALDQAQEASKQVPMHWSKRLCI*SSCSSC
Trigger: GCACGAGCTGCAGCTGGAGCAGATGCACAAACGTTT...GGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp CCTCTTGGGAGGCTACCTGAGCAGCCCGAAGGCCCAGTCATGGAGGCTCCACATTGTTCAAAACGTTTGTaGATCTGCTCCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PLGRLPEQPEGPVMEAPHCSKRL*ICSSCS
Trigger: GCTGCAGCTGGAGCAGATGCACAAACGTTTTGAACA...ATGTGGAGCCTCCATGACTGGGCCTTCGGGCTGCTCAGGTAGCCTCCCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp AACAGGCATCTCTGGCATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCCGCACGCTGTGGTCCTaGTCCATCTTCTCTACCTGC +
Preference number: 4 (lower is better)
Translates to: NRHLWHPSPRSLPRHTQSRTLWS*SIFSTC
Trigger: GCAGGTAGAGAAGATGGAGCAGGACCACAGCGTGCG...GCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATGCCAGAGATGCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp AGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTAGGAGGTCACAGTCGTGTTTCTGCTGCTaGTGCAGCCTCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: RLRRQASRFQCIGPRRSQSCFCC*CSLSAF
Trigger: GAAGGCGGAGAGGCTGCAGCAGCAGCAGAAACACGA...CTGTGACCTCCTAGGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp ACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAGGCATCCATGGACAGTaGCCGGGACTTCCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TVTEHLGCFSSMGLSLLGGIHGQ*PGLPEG
Trigger: CCCCTCCGGAAGTCCCGGCCACTGTCCATGGATGCC...TCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp GTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAGGCTCAGGTCTCGGTGGATaGTCCTCTTGCCGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: VTEHLGCFSSMGLSLLGGSGLGG*SSCRAG
Trigger: TCCTGCACGGCAAGAGGATCATCCACCGAGACCTGA...GCCTCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp TTAGTAGCGCTTGTGCCCACAGACAGTAGAGCTGGTGTTTGGGCAAACAGGAGGGGAGCTCCTGGCGCCTaGGAAATCTCATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LVALVPTDSRAGVWANRRGAPGA*EISSPR
Trigger: ACGAGGAGATGAGATTTCTCAGGCGCCAGGAGCTCC...CCTCCTGTTTGCCCAAACACCAGCTCTACTGTCTGTGGGCACAAGCGCTACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp TACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCACCTCCTCGCTTAATTTaGAGAACATTTCCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: YSLCLLWVLAPALSMAPPPPRLI*RTFPVP
Trigger: GGGAACAGGAAATGTTCTTCAAATTAAGCGAGGAGG...TGGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp TTAGTAGCGCTTGTGCCCACAGACAGTAGAGCTGGTGTTTGGGCAAACAGGAGGCTCTATGACTTTGGCTaGTGCCAGGGCACCGGTCTC +
Preference number: 4 (lower is better)
Translates to: LVALVPTDSRAGVWANRRLYDFG*CQGTGL
Trigger: GAGACCGGTGCCCTGGCAGCAGCCAAAGTCATAGAG...CCTCCTGTTTGCCCAAACACCAGCTCTACTGTCTGTGGGCACAAGCGCTACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp TCAGTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGATGATCCTCTTGCCGTaGAGGAAGTTGAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SVALDQAQEASKQVPMHWMILLP*RKLRAS
Trigger: GGAGGCTCTCAACTTCCTGCACGGCAAGAGGATCAT...CCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp CATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCAAAGTCAGCTATGTGCTCTCCTTCCGCTGCTaGCGGGGCAGTTTCTCAACC +
Preference number: 4 (lower is better)
Translates to: HPSPRSLPRHTQSKVSYVLSFRC*RGSFST
Trigger: GGTTGAGAAACTGCCCCGGCAGCAGCGGAAGGAGAG...CACATAGCTGACTTTGCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp AACAGGCATCTCTGGCATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCTCCCGCTCCTTCTCATaGTTACGCAGCAGGTCATGC +
Preference number: 4 (lower is better)
Translates to: NRHLWHPSPRSLPRHTQSSRSFS*LRSRSC
Trigger: GCATGACCTGCTGCGTAAGCATGAGAAGGAGCGGGA...GCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATGCCAGAGATGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp TTAGTAGCGCTTGTGCCCACAGACAGTAGAGCTGGTGTTTGGGCAAACAGGAGGTCTTGTACATGGCCATaGGCGTCTTGCCGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: LVALVPTDSRAGVWANRRSCTWP*ASCRRS
Trigger: GGAGCGACGGCAAGACGCGCATGGCCATGTACAAGA...CCTCCTGTTTGCCCAAACACCAGCTCTACTGTCTGTGGGCACAAGCGCTACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GGCACTGTGGACAACTGGGGCGCTGCAGGGGGATGGGTAATTGAGCTGGCACAGTTTTCATTCTGCAGCTaGTGTAGCTCGCTCATGTTG +
Preference number: 4 (lower is better)
Translates to: GTVDNWGAAGGWVIELAQFSFCS*CSSLML
Trigger: CAACATGAGCGAGCTACAGCAGCTGCAGAATGAAAA...CTGTGCCAGCTCAATTACCCATCCCCCTGCAGCGCCCCAGTTGTCCACAGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp AACAGGCATCTCTGGCATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCACGGGTGGTCACAGGTaGCCAGGATCTCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: NRHLWHPSPRSLPRHTQSTGGHR*PGSLSP
Trigger: TGGAGATAGAGATCCTGGCCACCTGTGACCACCCGT...GCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATGCCAGAGATGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp GTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCGTTGCTCTTGGAACTTaGCGTAGTCTCGATCCTGCT +
Preference number: 4 (lower is better)
Translates to: VALDQAQEASKQVPMHWSVALGT*RSLDPA
Trigger: AGCAGGATCGAGACTACGCCAAGTTCCAAGAGCAAC...GGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp CATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCAAAGTCAGCTATGTGTGGCTTTGCTGGGTGTaGTGGGTCTGGGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: HPSPRSLPRHTQSKVSYVWLCWV*WVWALP
Trigger: AGGCAGAGCCCAGACCCACCACACCCAGCAAAGCCA...CACATAGCTGACTTTGCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp AGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTAGGAGGTCACAGAGGGGAAGAAGTTGCTaGCTTTGCTGGGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RLRRQASRFQCIGPRRSQRGRSC*LCWVWW
Trigger: CCACCACACCCAGCAAAGCCAGCAACTTCTTCCCCT...CTGTGACCTCCTAGGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp ACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAGATCCAGCTCCAGCATaGTGGCATCCACAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TVTEHLGCFSSMGLSLLGDPAPA*WHPQLP
Trigger: GGGGAGCTGTGGATGCCATCATGCTGGAGCTGGATC...TCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp TCAGTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGGCAGTTTTGAGCCCTTaGGAGACAATGAGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: SVALDQAQEASKQVPMHWAVLSP*ETMSPF
Trigger: AAACGGGCTCATTGTCTCTCAAGGGCTCAAAACTGC...CCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAGGCTATGACTTTGGCTGCTaGCAGGGCACCGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VTEHLGCFSSMGLSLLGGYDFGC*QGTGLL
Trigger: AAGGAGACCGGTGCCCTGGCAGCAGCCAAAGTCATA...GCCTCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp TTAGTAGCGCTTGTGCCCACAGACAGTAGAGCTGGTGTTTGGGCAAACAGGAGGATCTTCTCTACCTGCTaGTTCTGCTGCCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LVALVPTDSRAGVWANRRIFSTC*FCCRSR
Trigger: CCTGGAGCGGCAGCAGAAGCAGCAGGTAGAGAAGAT...CCTCCTGTTTGCCCAAACACCAGCTCTACTGTCTGTGGGCACAAGCGCTACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp TTAGTAGCGCTTGTGCCCACAGACAGTAGAGCTGGTGTTTGGGCAAACAGGAGGCCATCTTCTGCTTCATaGTCTCCTTCCGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LVALVPTDSRAGVWANRRPSSAS*SPSAAA
Trigger: GGCAGCAGCGGAAGGAGAGCATGAAGCAGAAGATGG...CCTCCTGTTTGCCCAAACACCAGCTCTACTGTCTGTGGGCACAAGCGCTACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp TTAGTAGCGCTTGTGCCCACAGACAGTAGAGCTGGTGTTTGGGCAAACAGGAGGTCCAGGTCCTCCTTCTaGTTGGCTACAAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LVALVPTDSRAGVWANRRSRSSF*LATKSR
Trigger: CCGGGACTTTGTAGCCAAGCAGAAGGAGGACCTGGA...CCTCCTGTTTGCCCAAACACCAGCTCTACTGTCTGTGGGCACAAGCGCTACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp TTAGTAGCGCTTGTGCCCACAGACAGTAGAGCTGGTGTTTGGGCAAACAGGAGGGCTTTCAGGTCTCGGTaGATGATCCTCTTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LVALVPTDSRAGVWANRRAFRSR*MILLPC
Trigger: GCACGGCAAGAGGATCATCCACCGAGACCTGAAAGC...CCTCCTGTTTGCCCAAACACCAGCTCTACTGTCTGTGGGCACAAGCGCTACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp ACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGACTGACGAAGGGATGCTaGAGCAGCTGTGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: TVTEHLGCFSSMGLSLLGLTKGC*SSCAAL
Trigger: CAGTGCTGCACAGCTGCTGCAGCATCCCTTCGTCAG...TCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp ACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGATGGCCTTTTGGGACTTaGTGGCTGCAGGACTCGGGT +
Preference number: 4 (lower is better)
Translates to: TVTEHLGCFSSMGLSLLGWPFGT*WLQDSG
Trigger: ACCCGAGTCCTGCAGCCAGCAAGTCCCAAAAGGCCA...TCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp ACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGATGCATCTGCTCCAGCTaGAGCTCGTGCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TVTEHLGCFSSMGLSLLGCICSS*SSCLLL
Trigger: GAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCA...TCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp AACAGGCATCTCTGGCATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCACTGGGCCGGGTTTCTaGGTTCTTATCCAAGGCTAT +
Preference number: 4 (lower is better)
Translates to: NRHLWHPSPRSLPRHTQSTGPGF*VLIQGY
Trigger: ATAGCCTTGGATAAGAACCCAGAAACCCGGCCCAGT...GCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATGCCAGAGATGCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp TTAGTAGCGCTTGTGCCCACAGACAGTAGAGCTGGTGTTTGGGCAAACAGGAGGGGGGTGGAAGAATCCTaGAGAAGCTTGTTGGAGTCG +
Preference number: 4 (lower is better)
Translates to: LVALVPTDSRAGVWANRRGVEES*RSLLES
Trigger: CGACTCCAACAAGCTTCTCCAGGATTCTTCCACCCC...CCTCCTGTTTGCCCAAACACCAGCTCTACTGTCTGTGGGCACAAGCGCTACTAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp ACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGATTGCGGCGCACGCTGTaGTCCTGCTCCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TVTEHLGCFSSMGLSLLGLRRTL*SCSIFS
Trigger: AGAGAAGATGGAGCAGGACCACAGCGTGCGCCGCAA...TCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp AGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTAGGAGGTCACAGCTCTTCTCCTCCTGCTaGGAGAACTGCTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: RLRRQASRFQCIGPRRSQLFSSC*ENCLIF
Trigger: GAAGATCAAGCAGTTCTCCCAGCAGGAGGAGAAGAG...CTGTGACCTCCTAGGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp AGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTAGGAGGTCACAGACCATGTCTCGCATCTaGTTCTCGTGTTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RLRRQASRFQCIGPRRSQTMSRI*FSCFCC
Trigger: GCAGCAGAAACACGAGAACCAGATGCGAGACATGGT...CTGTGACCTCCTAGGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp ACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGACAGGGCCTTTTTGCGTaGCCGAAGCTTGTCTCGCCA +
Preference number: 4 (lower is better)
Translates to: TVTEHLGCFSSMGLSLLGQGLFA*PKLVSP
Trigger: TGGCGAGACAAGCTTCGGCCACGCAAAAAGGCCCTG...TCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp ACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGACAAAATCAGCCAGCCTaGTGTCCCCCTCAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TVTEHLGCFSSMGLSLLGQNQPA*CPPQGS
Trigger: TGACCCTTGAGGGGGACATCAGGCTGGCTGATTTTG...TCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp TTAGTAGCGCTTGTGCCCACAGACAGTAGAGCTGGTGTTTGGGCAAACAGGAGGGCCCTTGAGAGACAATaGGCCCGTTTCTTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LVALVPTDSRAGVWANRRALERQ*ARFFVQ
Trigger: CTGAACAAAGAAACGGGCTCATTGTCTCTCAAGGGC...CCTCCTGTTTGCCCAAACACCAGCTCTACTGTCTGTGGGCACAAGCGCTACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp TGTACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGCACTGCCCGCACCGTTaGTGTGCAGGCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: CTVTEHLGCFSSMGLSLLHCPHR*CAGSSC
Trigger: ACAAGAAGAGCCTGCACATCAACGGTGCGGGCAGTG...CAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp TGTACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGTTGATCTTCTCGCGCTaGTCAGAGGCACTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: CTVTEHLGCFSSMGLSLLLIFSR*SEALPA
Trigger: TGCGGGCAGTGCCTCTGAGCAGCGCGAGAAGATCAA...CAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp AACAGGCATCTCTGGCATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCCTCGGGTTCTCATCCTaGTCAGGGATTTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NRHLWHPSPRSLPRHTQSLGFSS*SGICFS
Trigger: AGAGAAACAAATCCCTGACCAGGATGAGAACCCGAG...GCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATGCCAGAGATGCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp ACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAGTAGCTCGCTCATGTTaGTTTCACACTGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: TVTEHLGCFSSMGLSLLGVARSC*FHTAPP
Trigger: TGGTGGCGCAGTGTGAAAGCAACATGAGCGAGCTAC...TCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp ACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGATTCACGATATACGGGTaGTCACAGGTGGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: TVTEHLGCFSSMGLSLLGFTIYG*SQVARI
Trigger: GATCCTGGCCACCTGTGACCACCCGTATATCGTGAA...TCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp CATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCAAAGTCAGCTATGTGAGTCATTGTCATTCTTaGAGAGCCCATCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HPSPRSLPRHTQSKVSYVSHCHS*RAHLQG
Trigger: GCCCTGCAGATGGGCTCTCCAAGAATGACAATGACT...CACATAGCTGACTTTGCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp AAAATAAGATGGGATACAATGTCAGAATCAGCAGAACAGGCATCTCTGGCATCCGCTGCAGCTCGTGCTTaGTGCTCAGCTGCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: KIRWDTMSESAEQASLASAAARA*CSAASG
Trigger: ACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGC...GGATGCCAGAGATGCCTGTTCTGCTGATTCTGACATTGTATCCCATCTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp ACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAAGGGCCTTCAGCTTCTaGGTTTCATGCTCTACCAAC +
Preference number: 4 (lower is better)
Translates to: TVTEHLGCFSSMGLSLLGRAFSF*VSCSTN
Trigger: GTTGGTAGAGCATGAAACCCAGAAGCTGAAGGCCCT...TCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp CATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCAAAGTCAGCTATGTGTGTTCCCGCTTCTTCTaGTTCAAATCCTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HPSPRSLPRHTQSKVSYVCSRFF*FKSSSR
Trigger: CCTGGAAGAGGATTTGAACCAGAAGAAGCGGGAACA...CACATAGCTGACTTTGCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp AACAGGCATCTCTGGCATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCAAGGAGTCTCGCTTTTaGAGAGTTTTCAGATTCTTG +
Preference number: 4 (lower is better)
Translates to: NRHLWHPSPRSLPRHTQSKESRF*RVFRFL
Trigger: CAAGAATCTGAAAACTCTGCAAAAGCGAGACTCCTT...GCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATGCCAGAGATGCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp GTGCTTGGAAATGCATACACGTTATTTCCATCCTTCATGAAGGGAAATATAAGTCCAGGCGGATCCGCTTaGCCTCCTCTTTGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: VLGNAYTLFPSFMKGNISPGGSA*PPLCGA
Trigger: TGCGCCGCAAAGAGGAGGCCAAGCGGATCCGCCTGG...ACTTATATTTCCCTTCATGAAGGATGGAAATAACGTGTATGCATTTCCAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp CATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCAAAGTCAGCTATGTGTTCAGGGTCTTATTGTaGAGTTTTGAGCCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: HPSPRSLPRHTQSKVSYVFRVLL*SFEPLR
Trigger: TCTCAAGGGCTCAAAACTGCACAATAAGACCCTGAA...CACATAGCTGACTTTGCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp AAAATAAGATGGGATACAATGTCAGAATCAGCAGAACAGGCATCTCTGGCATCCTCCATCTTCTCTACCTaGTGCTTCTGCTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KIRWDTMSESAEQASLASSIFST*CFCCRS
Trigger: GGAGCGGCAGCAGAAGCAGCAGGTAGAGAAGATGGA...GGATGCCAGAGATGCCTGTTCTGCTGATTCTGACATTGTATCCCATCTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp AAAATAAGATGGGATACAATGTCAGAATCAGCAGAACAGGCATCTCTGGCATCCAGCAGGTCATGCCGCTaGAGGAAGTACTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: KIRWDTMSESAEQASLASSRSCR*RKYWSF
Trigger: GAAGGACCAGTACTTCCTGCAGCGGCATGACCTGCT...GGATGCCAGAGATGCCTGTTCTGCTGATTCTGACATTGTATCCCATCTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp GTGCTTGGAAATGCATACACGTTATTTCCATCCTTCATGAAGGGAAATATAAGTTGGCGGCATACGACCTaGATCTGGGGCTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: VLGNAYTLFPSFMKGNISWRHTT*IWGSVR
Trigger: CCTCACTGAGCCCCAGATTCAGGTCGTATGCCGCCA...ACTTATATTTCCCTTCATGAAGGATGGAAATAACGTGTATGCATTTCCAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GTGCTTGGAAATGCATACACGTTATTTCCATCCTTCATGAAGGGAAATATAAGTTCCAGCTGCAGCTCGTaGTTGCTGCTCAGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: VLGNAYTLFPSFMKGNISSSCSS*LLLSCV
Trigger: GACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGA...ACTTATATTTCCCTTCATGAAGGATGGAAATAACGTGTATGCATTTCCAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GTGCTTGGAAATGCATACACGTTATTTCCATCCTTCATGAAGGGAAATATAAGTCGCTCCTGCAACTGGTaGTCCTCCATCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: VLGNAYTLFPSFMKGNISRSCNW*SSISHR
Trigger: CCTGTGGGAGATGGAGGAGCACCAGTTGCAGGAGCG...ACTTATATTTCCCTTCATGAAGGATGGAAATAACGTGTATGCATTTCCAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GCTTCTTTACTGCACACTAGATCTGGGAGTCCCAAGACCTGTTTTCCTATTTTTTGTAGGGGAAGAAGTTaGTGGCTTTGCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ASLLHTRSGSPKTCFPIFCRGRS*WLCWVW
Trigger: CCACACCCAGCAAAGCCAGCAACTTCTTCCCCTACA...AAAAATAGGAAAACAGGTCTTGGGACTCCCAGATCTAGTGTGCAGTAAAGAAGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp ACTCCCTCCCAAGCACCCAGTTTTCATTTGAGGAAACTTTTTAGAAAGTTGCTTGGCTCTTCTTGTACATaGCCATGCGCGTCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: TPSQAPSFHLRKLFRKLLGSSCT*PCASCR
Trigger: ACGGCAAGACGCGCATGGCCATGTACAAGAAGAGCC...AAGCAACTTTCTAAAAAGTTTCCTCAAATGAAAACTGGGTGCTTGGGAGGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp ACTCCCTCCCAAGCACCCAGTTTTCATTTGAGGAAACTTTTTAGAAAGTTGCTTCCCGCACCGTTGATGTaGAGGCTCTTCTTGTACATG +
Preference number: 4 (lower is better)
Translates to: TPSQAPSFHLRKLFRKLLPAPLM*RLFLYM
Trigger: CATGTACAAGAAGAGCCTGCACATCAACGGTGCGGG...AAGCAACTTTCTAAAAAGTTTCCTCAAATGAAAACTGGGTGCTTGGGAGGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp GCTTCTTTACTGCACACTAGATCTGGGAGTCCCAAGACCTGTTTTCCTATTTTTCATCCATCTGAATTCTaGCATCCATGGACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: ASLLHTRSGSPKTCFPIFHPSEF*HPWTVA
Trigger: GGCCACTGTCCATGGATGCCAGAATTCAGATGGATG...AAAAATAGGAAAACAGGTCTTGGGACTCCCAGATCTAGTGTGCAGTAAAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp ACTCCCTCCCAAGCACCCAGTTTTCATTTGAGGAAACTTTTTAGAAAGTTGCTTCATTCCTTCAGGCTCTaGTTGTGGCTCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: TPSQAPSFHLRKLFRKLLHSFRL*LWLSSR
Trigger: CCTGGATGAGAGCCACAACCAGAGCCTGAAGGAATG...AAGCAACTTTCTAAAAAGTTTCCTCAAATGAAAACTGGGTGCTTGGGAGGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp GTGCTTGGAAATGCATACACGTTATTTCCATCCTTCATGAAGGGAAATATAAGTTTCAGGCTCTGGTTGTaGCTCTCATCCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: VLGNAYTLFPSFMKGNISFRLWL*LSSRAF
Trigger: GAAGGCCCTGGATGAGAGCCACAACCAGAGCCTGAA...ACTTATATTTCCCTTCATGAAGGATGGAAATAACGTGTATGCATTTCCAAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR TCA 90 bp ACTCCCTCCCAAGCACCCAGTTTTCATTTGAGGAAACTTTTTAGAAAGTTGCTTCCTTCTTCATTTGCTTaGGTTGCTCTTGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: TPSQAPSFHLRKLFRKLLPSSFA*VALGTW
Trigger: CCAAGTTCCAAGAGCAACTCAAGCAAATGAAGAAGG...AAGCAACTTTCTAAAAAGTTTCCTCAAATGAAAACTGGGTGCTTGGGAGGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp GTGCTTGGAAATGCATACACGTTATTTCCATCCTTCATGAAGGGAAATATAAGTCGATGTTCTTCTTTCTaGAGAAGCCGAAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: VLGNAYTLFPSFMKGNISRCSSF*RSRSSR
Trigger: CCGAGAGCTTCGGCTTCTGCAGAAAGAAGAACATCG...ACTTATATTTCCCTTCATGAAGGATGGAAATAACGTGTATGCATTTCCAAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR GCA 90 bp AAAATAAGATGGGATACAATGTCAGAATCAGCAGAACAGGCATCTCTGGCATCCACCTCCTTCTTCATTTaGTTGAGTTGCTCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: KIRWDTMSESAEQASLASTSFFI*LSCSWN
Trigger: GTTCCAAGAGCAACTCAAGCAAATGAAGAAGGAGGT...GGATGCCAGAGATGCCTGTTCTGCTGATTCTGACATTGTATCCCATCTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CCA 90 bp GTGCTTGGAAATGCATACACGTTATTTCCATCCTTCATGAAGGGAAATATAAGTTTCTCTTCTCGAAGGTaGATAACCGCAAGATGCGGC +
Preference number: 4 (lower is better)
Translates to: VLGNAYTLFPSFMKGNISFSSRR*ITARCG
Trigger: GCCGCATCTTGCGGTTATCCACCTTCGAGAAGAGAA...ACTTATATTTCCCTTCATGAAGGATGGAAATAACGTGTATGCATTTCCAAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp GGCACTGTGGACAACTGGGGCGCTGCAGGGGGATGGGTAATTGAGCTGGCACAGAGGACCCGCATGGGGTaGAGCTCGTGGTGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: GTVDNWGAAGGWVIELAQRTRMG*SSWCGG
Trigger: GCCCCCACACCACGAGCTCAACCCCATGCGGGTCCT...CTGTGCCAGCTCAATTACCCATCCCCCTGCAGCGCCCCAGTTGTCCACAGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp TACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCATCCAGGCGGATCCGCTaGGCCTCCTCTTTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: YSLCLLWVLAPALSMAPPSRRIR*ASSLRR
Trigger: GCGCCGCAAAGAGGAGGCCAAGCGGATCCGCCTGGA...TGGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 90 bp CGAAGGCGCCGTCTCCCAGCTCGCCCACGATCTCCCATACATCGTTaGGGTCCAGGTCCCGGCGGACGTGCTCATATTCACGGGACTTTC +
Preference number: 5 (lower is better)
Translates to: RRRRLPARPRSPIHR*GPGPGGRAHIHGTF
Trigger: GAAAGTCCCGTGAATATGAGCACGTCCGCCGGGACCTGGACCCCAACGATGTATGGGAGATCGTGGGCGAGCTGGGAGACGGCGCCTTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp CGTAGTCTCGATCCTGCTCCAGGCGGATCCGCTTGGCCTCCTCTTTaGGGCGCACGCTGTGGTCCTGCTCCATCTTCTCTACCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RSLDPAPGGSAWPPL*GARCGPAPSSLPAA
Trigger: AGCAGCAGGTAGAGAAGATGGAGCAGGACCACAGCGTGCGCCGCAAAGAGGAGGCCAAGCGGATCCGCCTGGAGCAGGATCGAGACTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 90 bp TCCGACTTGGCAATCTTGAGCAGGACCCGCATGGGGTTGAGCTCGTaGTGTGGGGGCTCGATCTGCGCCATCTCGATCAGCGTGATGCCC +
Preference number: 5 (lower is better)
Translates to: SDLAILSRTRMGLSS*CGGSICAISISVMP
Trigger: GGGCATCACGCTGATCGAGATGGCGCAGATCGAGCCCCCACACCACGAGCTCAACCCCATGCGGGTCCTGCTCAAGATTGCCAAGTCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp TACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCATCCTTCAGGCTCTGGTaGTGGCTCTCATCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: YSLCLLWVLAPALSMAPPSFRLW*WLSSRA
Trigger: GGCCCTGGATGAGAGCCACAACCAGAGCCTGAAGGA...TGGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp GTACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCTTGCGTGGCCGAAGCTaGTCTCGCCATTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VQPVPSLGSGASTQHGPTLRGRS*SRHSFR
Trigger: CCTGAAGGAATGGCGAGACAAGCTTCGGCCACGCAA...GGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 90 bp CTTGGCAATCTTGAGCAGGACCCGCATGGGGTTGAGCTCGTGGTGTaGGGGCTCGATCTGCGCCATCTCGATCAGCGTGATGCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: LGNLEQDPHGVELVV*GLDLRHLDQRDAQG
Trigger: TCCTTGGGCATCACGCTGATCGAGATGGCGCAGATCGAGCCCCCACACCACGAGCTCAACCCCATGCGGGTCCTGCTCAAGATTGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 90 bp CTTGGAACTTGGCGTAGTCTCGATCCTGCTCCAGGCGGATCCGCTTaGCCTCCTCTTTGCGGCGCACGCTGTGGTCCTGCTCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: LGTWRSLDPAPGGSA*PPLCGARCGPAPSS
Trigger: AGAAGATGGAGCAGGACCACAGCGTGCGCCGCAAAGAGGAGGCCAAGCGGATCCGCCTGGAGCAGGATCGAGACTACGCCAAGTTCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp GTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTCGCTCCTCTGGATCTaGGGTAGCCGCGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VALDQAQEASKQVPMHWSSLLWI*GSRAFS
Trigger: GGAGAAGGCGCGGCTACCCAAGATCCAGAGGAGCGA...GGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS TCA 90 bp TGCCGCTGCAGGAAGTACTGGTCCTTCAGTTGCTGCTTCACCAGCTaGTGTCGCTCCTGCAACTGGTGCTCCTCCATCTCCCACAGGGCC +
Preference number: 5 (lower is better)
Translates to: CRCRKYWSFSCCFTS*CRSCNWCSSISHRA
Trigger: GGCCCTGTGGGAGATGGAGGAGCACCAGTTGCAGGAGCGACATCAGCTGGTGAAGCAGCAACTGAAGGACCAGTACTTCCTGCAGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp CTGCTGCCAGGGCACCGGTCTCCTTGTTTTTGGCCTTGTAGACTTTaGCGAAGGCGCCGTCTCCCAGCTCGCCCACGATCTCCCATACAT +
Preference number: 5 (lower is better)
Translates to: LLPGHRSPCFWPCRL*RRRRLPARPRSPIH
Trigger: ATGTATGGGAGATCGTGGGCGAGCTGGGAGACGGCGCCTTCGGCAAAGTCTACAAGGCCAAAAACAAGGAGACCGGTGCCCTGGCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp TTGATCTTCTCGCGCTGCTCAGAGGCACTGCCCGCACCGTTGATGTaGAGGCTCTTCTTGTACATGGCCATGCGCGTCTTGCCGTCGCTC +
Preference number: 5 (lower is better)
Translates to: LIFSRCSEALPAPLM*RLFLYMAMRVLPSL
Trigger: GAGCGACGGCAAGACGCGCATGGCCATGTACAAGAAGAGCCTGCACATCAACGGTGCGGGCAGTGCCTCTGAGCAGCGCGAGAAGATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 90 bp AAGGTCTCCAGGGCACTGCTGTTAGGTCGGCTCTGGTTGGCCTTTTaGGACTTGCTGGCTGCAGGACTCGGGTTCTCATCCTGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: KVSRALLLGRLWLAF*DLLAAGLGFSSWSG
Trigger: CCCTGACCAGGATGAGAACCCGAGTCCTGCAGCCAGCAAGTCCCAAAAGGCCAACCAGAGCCGACCTAACAGCAGTGCCCTGGAGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp TCAGTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGATGGCCATGCGCGTCTaGCCGTCGCTCCTCTGGATC +
Preference number: 5 (lower is better)
Translates to: SVALDQAQEASKQVPMHWMAMRV*PSLLWI
Trigger: GATCCAGAGGAGCGACGGCAAGACGCGCATGGCCAT...CCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp TACAGCCTGTGCCTTCTCTGGGTTCTGGCGCCAGCACTCAGCATGGCCCCACCATGTAGCTCGCTCATGTaGCTTTCACACTGCGCCACC +
Preference number: 5 (lower is better)
Translates to: YSLCLLWVLAPALSMAPPCSSLM*LSHCAT
Trigger: GGTGGCGCAGTGTGAAAGCAACATGAGCGAGCTACA...TGGTGGGGCCATGCTGAGTGCTGGCGCCAGAACCCAGAGAAGGCACAGGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp GGCACTGTGGACAACTGGGGCGCTGCAGGGGGATGGGTAATTGAGCTGGCACAGTCTTCCAGGGCCTTTTaGCGTGGCCGAAGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: GTVDNWGAAGGWVIELAQSSRAF*RGRSLS
Trigger: AGACAAGCTTCGGCCACGCAAAAAGGCCCTGGAAGA...CTGTGCCAGCTCAATTACCCATCCCCCTGCAGCGCCCCAGTTGTCCACAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS TCA 90 bp CCGTGCAGGAAGTTGAGAGCCTCCAACATCTGGCGGCATACGACCTaGATCTGGGGCTCAGTGAGGCCTCGATCCAGCTCCAGCATGATG +
Preference number: 5 (lower is better)
Translates to: PCRKLRASNIWRHTT*IWGSVRPRSSSSMM
Trigger: CATCATGCTGGAGCTGGATCGAGGCCTCACTGAGCCCCAGATTCAGGTCGTATGCCGCCAGATGTTGGAGGCTCTCAACTTCCTGCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS TCA 90 bp CGCTCCTCTGGATCTTGGGTAGCCGCGCCTTCTCCTGTTGCTGTCTaGCCTTCAGCTGCTCCATCATGCGCTGGTTGTAGCGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: RSSGSWVAAPSPVAV*PSAAPSCAGCSAAS
Trigger: AGATGCAGCGCTACAACCAGCGCATGATGGAGCAGCTGAAGGTCAGACAGCAACAGGAGAAGGCGCGGCTACCCAAGATCCAGAGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 90 bp AGGCTCTTCTTGTACATGGCCATGCGCGTCTTGCCGTCGCTCCTCTaGATCTTGGGTAGCCGCGCCTTCTCCTGTTGCTGTCTGACCTTC +
Preference number: 5 (lower is better)
Translates to: RLFLYMAMRVLPSLL*ILGSRAFSCCCLTF
Trigger: GAAGGTCAGACAGCAACAGGAGAAGGCGCGGCTACCCAAGATCCAGAGGAGCGACGGCAAGACGCGCATGGCCATGTACAAGAAGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp GTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTTGGTCTCTATGACTTaGGCTGCTGCCAGGGCACCG +
Preference number: 5 (lower is better)
Translates to: VALDQAQEASKQVPMHWSLVSMT*AAARAP
Trigger: CGGTGCCCTGGCAGCAGCCAAAGTCATAGAGACCAA...GGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp TTAGTAGCGCTTGTGCCCACAGACAGTAGAGCTGGTGTTTGGGCAAACAGGAGGCCATTACCTCCGCCTTaGCCTCGGCCACCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: LVALVPTDSRAGVWANRRPLPPP*PRPPAP
Trigger: GGGAGCTGGTGGCCGAGGCAAAGGCGGAGGTAATGG...CCTCCTGTTTGCCCAAACACCAGCTCTACTGTCTGTGGGCACAAGCGCTACTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp TCAGTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGGCACTGCCCGCACCGTaGATGTGCAGGCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SVALDQAQEASKQVPMHWALPAP*MCRLFL
Trigger: CAAGAAGAGCCTGCACATCAACGGTGCGGGCAGTGC...CCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp CCCACGATCTCCCATACATCGTTGGGGTCCAGGTCCCGGCGGACGTaGTCATATTCACGGGACTTTCTCTTCTCGAAGGTGGATAACCGC +
Preference number: 5 (lower is better)
Translates to: PTISHTSLGSRSRRT*SYSRDFLFSKVDNR
Trigger: GCGGTTATCCACCTTCGAGAAGAGAAAGTCCCGTGAATATGAGCACGTCCGCCGGGACCTGGACCCCAACGATGTATGGGAGATCGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp CGCTGCATCTGTTCCCGCTCCTTCTCATGCTTACGCAGCAGGTCATaGCGCTGCAGGAAGTACTGGTCCTTCAGTTGCTGCTTCACCAGC +
Preference number: 5 (lower is better)
Translates to: RCICSRSFSCLRSRS*RCRKYWSFSCCFTS
Trigger: GCTGGTGAAGCAGCAACTGAAGGACCAGTACTTCCTGCAGCGGCATGACCTGCTGCGTAAGCATGAGAAGGAGCGGGAACAGATGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 90 bp TGCATCTGCTCCAGCTGCAGCTCGTGCTTGCTGCTCAGCTGCGTCTaGTTCCGATGTTCTTCTTTCTGCAGAAGCCGAAGCTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: CICSSCSSCLLLSCV*FRCSSFCRSRSSRS
Trigger: GCTCCGAGAGCTTCGGCTTCTGCAGAAAGAAGAACATCGGAACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp GTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTCCCGAAGAGCCTTATaGCTGGTGACTCTGCTGACG +
Preference number: 5 (lower is better)
Translates to: VALDQAQEASKQVPMHWSSRRAL*LVTLLT
Trigger: CGTCAGCAGAGTCACCAGCAATAAGGCTCTTCGGGA...GGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp TTAGTAGCGCTTGTGCCCACAGACAGTAGAGCTGGTGTTTGGGCAAACAGGAGGTCCATCCCCAGAGGGTaGGCTACAGGACCCGCTCAC +
Preference number: 5 (lower is better)
Translates to: LVALVPTDSRAGVWANRRSIPRG*ATGPAH
Trigger: GTGAGCGGGTCCTGTAGCCAACCCTCTGGGGATGGA...CCTCCTGTTTGCCCAAACACCAGCTCTACTGTCTGTGGGCACAAGCGCTACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS TCA 90 bp TCTCCACGATGTAGTCCTCCAGCTCCTCCTCGCTCTTGGTCTCTATaGCTTTGGCTGCTGCCAGGGCACCGGTCTCCTTGTTTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SPRCSPPAPPRSWSL*LWLLPGHRSPCFWP
Trigger: AGGCCAAAAACAAGGAGACCGGTGCCCTGGCAGCAGCCAAAGTCATAGAGACCAAGAGCGAGGAGGAGCTGGAGGACTACATCGTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp GTCCTCCAGCTCCTCCTCGCTCTTGGTCTCTATGACTTTGGCTGCTaGCAGGGCACCGGTCTCCTTGTTTTTGGCCTTGTAGACTTTGCC +
Preference number: 5 (lower is better)
Translates to: VLQLLLALGLYDFGC*QGTGLLVFGLVDFA
Trigger: GGCAAAGTCTACAAGGCCAAAAACAAGGAGACCGGTGCCCTGGCAGCAGCCAAAGTCATAGAGACCAAGAGCGAGGAGGAGCTGGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp TCGTGCTTGCTGCTCAGCTGCGTCTGGTTCCGATGTTCTTCTTTCTaGAGAAGCCGAAGCTCTCGGAGCTCCTGGCGCCTGAGAAATCTC +
Preference number: 5 (lower is better)
Translates to: SCLLLSCVWFRCSSF*RSRSSRSSWRLRNL
Trigger: GAGATTTCTCAGGCGCCAGGAGCTCCGAGAGCTTCGGCTTCTGCAGAAAGAAGAACATCGGAACCAGACGCAGCTGAGCAGCAAGCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 90 bp GCCTTTTTGCGTGGCCGAAGCTTGTCTCGCCATTCCTTCAGGCTCTaGTTGTGGCTCTCATCCAGGGCCTTCAGCTTCTGGGTTTCATGC +
Preference number: 5 (lower is better)
Translates to: AFLRGRSLSRHSFRL*LWLSSRAFSFWVSC
Trigger: GCATGAAACCCAGAAGCTGAAGGCCCTGGATGAGAGCCACAACCAGAGCCTGAAGGAATGGCGAGACAAGCTTCGGCCACGCAAAAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp GTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAGGCTCCGACTTGGCAATCTaGAGCAGGACCCGCATGGGG +
Preference number: 5 (lower is better)
Translates to: VTEHLGCFSSMGLSLLGGSDLAI*SRTRMG
Trigger: CCCCATGCGGGTCCTGCTCAAGATTGCCAAGTCGGA...GCCTCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp CGTTTGTGCATCTGCTCCAGCTGCAGCTCGTGCTTGCTGCTCAGCTaGGTCTGGTTCCGATGTTCTTCTTTCTGCAGAAGCCGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: RLCICSSCSSCLLLS*VWFRCSSFCRSRSS
Trigger: AGAGCTTCGGCTTCTGCAGAAAGAAGAACATCGGAACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCACAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 90 bp AGTAATAGGCCCCCAGGAGCTTCACGATATACGGGTGGTCACAGGTaGCCAGGATCTCTATCTCCACGATGTAGTCCTCCAGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SNRPPGASRYTGGHR*PGSLSPRCSPPAPP
Trigger: AGGAGGAGCTGGAGGACTACATCGTGGAGATAGAGATCCTGGCCACCTGTGACCACCCGTATATCGTGAAGCTCCTGGGGGCCTATTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp AGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTAGGAGGTCACAGCGGTGGATGATCCTCTaGCCGTGCAGGAAGTTGAGA +
Preference number: 5 (lower is better)
Translates to: RLRRQASRFQCIGPRRSQRWMIL*PCRKLR
Trigger: TCTCAACTTCCTGCACGGCAAGAGGATCATCCACCG...CTGTGACCTCCTAGGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp AGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTAGGAGGTCACAGAGGGTCATAAGCACGTaGCCAGCTTTCAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: RLRRQASRFQCIGPRRSQRVIST*PAFRSR
Trigger: CCGAGACCTGAAAGCTGGCAACGTGCTTATGACCCT...CTGTGACCTCCTAGGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp AACAGGCATCTCTGGCATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCGAATCCTGGAGAAGCTaGTTGGAGTCGAGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: NRHLWHPSPRSLPRHTQSESWRS*LESRLG
Trigger: GCCAAGCCTCGACTCCAACAAGCTTCTCCAGGATTC...GCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATGCCAGAGATGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp GTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAGGCAGGTCCTCCTTCTGCTaGGCTACAAAGTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: VTEHLGCFSSMGLSLLGGRSSFC*ATKSRS
Trigger: GGACCGGGACTTTGTAGCCAAGCAGAAGGAGGACCT...GCCTCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp AGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTAGGAGGTCACAGATGTGCAGGCTCTTCTaGTACATGGCCATGCGCGTC +
Preference number: 5 (lower is better)
Translates to: RLRRQASRFQCIGPRRSQMCRLF*YMAMRV
Trigger: GACGCGCATGGCCATGTACAAGAAGAGCCTGCACAT...CTGTGACCTCCTAGGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS TCA 90 bp CTCGGGTTCTCATCCTGGTCAGGGATTTGTTTCTCTTCATCCATCTaGATTCTGGCATCCATGGACAGTGGCCGGGACTTCCGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: LGFSSWSGICFSSSI*ILASMDSGRDFRRG
Trigger: TCCCCTCCGGAAGTCCCGGCCACTGTCCATGGATGCCAGAATTCAGATGGATGAAGAGAAACAAATCCCTGACCAGGATGAGAACCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp GTAGTCCTCCAGCTCCTCCTCGCTCTTGGTCTCTATGACTTTGGCTaGTGCCAGGGCACCGGTCTCCTTGTTTTTGGCCTTGTAGACTTT +
Preference number: 5 (lower is better)
Translates to: VVLQLLLALGLYDFG*CQGTGLLVFGLVDF
Trigger: AAAGTCTACAAGGCCAAAAACAAGGAGACCGGTGCCCTGGCAGCAGCCAAAGTCATAGAGACCAAGAGCGAGGAGGAGCTGGAGGACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp TGTACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGTGCAGGGCTGGTGGTTaGGAGGGGTCCATCCCCAGA +
Preference number: 5 (lower is better)
Translates to: CTVTEHLGCFSSMGLSLLCRAGG*EGSIPR
Trigger: TCTGGGGATGGACCCCTCCAAACCACCAGCCCTGCA...CAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp TGTACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGAGCTGCAGCTCGTGCTaGCTGCTCAGCTGCGTCTGG +
Preference number: 5 (lower is better)
Translates to: CTVTEHLGCFSSMGLSLLSCSSC*LLSCVW
Trigger: CCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCT...CAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp GTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAGGCAAGAAGTTGCTGGCTTaGCTGGGTGTGGTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: VTEHLGCFSSMGLSLLGGKKLLA*LGVVGL
Trigger: CAGACCCACCACACCCAGCAAAGCCAGCAACTTCTT...GCCTCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp GTTCAAAACGTTTGTGCATCTGCTCCAGCTGCAGCTCGTGCTTGCTaGTCAGCTGCGTCTGGTTCCGATGTTCTTCTTTCTGCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: VQNVCASAPAAARAC*SAASGSDVLLSAEA
Trigger: GGCTTCTGCAGAAAGAAGAACATCGGAACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCACAAACGTTTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp AGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTAGGAGGTCACAGAAGTCATTGTCATTCTaGGAGAGCCCATCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: RLRRQASRFQCIGPRRSQKSLSF*ESPSAG
Trigger: CCCTGCAGATGGGCTCTCCAAGAATGACAATGACTT...CTGTGACCTCCTAGGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS TCA 90 bp ACCGGCGGGTCCGTTTCAGGGTCTTATTGTGCAGTTTTGAGCCCTTaGGAGACAATGAGCCCGTTTCTTTGTTCAGTGACAGGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: TGGSVSGSYCAVLSP*ETMSPFLCSVTGQQ
Trigger: CTGCTGACCTGTCACTGAACAAAGAAACGGGCTCATTGTCTCTCAAGGGCTCAAAACTGCACAATAAGACCCTGAAACGGACCCGCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp TTTTCATTCTGCAGCTGCTGTAGCTCGCTCATGTTGCTTTCACACTaGGCCACCATGTCTCGCATCTGGTTCTCGTGTTTCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FSFCSCCSSLMLLSH*ATMSRIWFSCFCCC
Trigger: GCAGCAGCAGAAACACGAGAACCAGATGCGAGACATGGTGGCGCAGTGTGAAAGCAACATGAGCGAGCTACAGCAGCTGCAGAATGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp AGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTAGGAGGTCACAGTCTTGTTCAAAACGTTaGTGCATCTGCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RLRRQASRFQCIGPRRSQSCSKR*CICSSC
Trigger: GCAGCTGGAGCAGATGCACAAACGTTTTGAACAAGA...CTGTGACCTCCTAGGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp CATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCAAAGTCAGCTATGTGGTACTGGTCCTTCAGTaGCTGCTTCACCAGCTGATG +
Preference number: 5 (lower is better)
Translates to: HPSPRSLPRHTQSKVSYVVLVLQ*LLHQLM
Trigger: CATCAGCTGGTGAAGCAGCAACTGAAGGACCAGTAC...CACATAGCTGACTTTGCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp CTTGTTCAAAACGTTTGTGCATCTGCTCCAGCTGCAGCTCGTGCTTaGTGCTCAGCTGCGTCTGGTTCCGATGTTCTTCTTTCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: LVQNVCASAPAAARA*CSAASGSDVLLSAE
Trigger: TTCTGCAGAAAGAAGAACATCGGAACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCACAAACGTTTTGAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp TTGGCGTTGATTTCTTGTTCAAAACGTTTGTGCATCTGCTCCAGCTaGAGCTCGTGCTTGCTGCTCAGCTGCGTCTGGTTCCGATGTTCT +
Preference number: 5 (lower is better)
Translates to: LALISCSKRLCICSS*SSCLLLSCVWFRCS
Trigger: AGAACATCGGAACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCACAAACGTTTTGAACAAGAAATCAACGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp GTGGCCCTGGATCAGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCCTTGGCGTTGATTTCTaGTTCAAAACGTTTGTGCAT +
Preference number: 5 (lower is better)
Translates to: VALDQAQEASKQVPMHWSLGVDF*FKTFVH
Trigger: ATGCACAAACGTTTTGAACAAGAAATCAACGCCAAG...GGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCTGATCCAGGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp ATTTCTTGTTCAAAACGTTTGTGCATCTGCTCCAGCTGCAGCTCGTaGTTGCTGCTCAGCTGCGTCTGGTTCCGATGTTCTTCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: ISCSKRLCICSSCSS*LLLSCVWFRCSSFC
Trigger: GCAGAAAGAAGAACATCGGAACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCACAAACGTTTTGAACAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp ACAGATGACACTTTTCATTCTGCAGCTGCTGTAGCTCGCTCATGTTaGTTTCACACTGCGCCACCATGTCTCGCATCTGGTTCTCGTGTT +
Preference number: 5 (lower is better)
Translates to: TDDTFHSAAAVARSC*FHTAPPCLASGSRV
Trigger: AACACGAGAACCAGATGCGAGACATGGTGGCGCAGTGTGAAAGCAACATGAGCGAGCTACAGCAGCTGCAGAATGAAAAGTGTCATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 90 bp GCCTCCTCGCTTAATTTGAAGAACATTTCCTGTTCCCGCTTCTTCTaGTTCAAATCCTCTTCCAGGGCCTTTTTGCGTGGCCGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: ASSLNLKNISCSRFF*FKSSSRAFLRGRSL
Trigger: CAAGCTTCGGCCACGCAAAAAGGCCCTGGAAGAGGATTTGAACCAGAAGAAGCGGGAACAGGAAATGTTCTTCAAATTAAGCGAGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp ACTCCCTCCCAAGCACCCAGTTTTCATTTGAGGAAACTTTTTAGAAAGTTGCTTATCTCCCATACATCGTaGGGGTCCAGGTCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: TPSQAPSFHLRKLFRKLLISHTS*GSRSRR
Trigger: CCGCCGGGACCTGGACCCCAACGATGTATGGGAGAT...AAGCAACTTTCTAAAAAGTTTCCTCAAATGAAAACTGGGTGCTTGGGAGGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp AGGCTCAGGAGGCAAGCAAGCAGGTTCCAATGCATTGGTCCTAGGAGGTCACAGGAAGGAGTCTCGCTTTaGCAGAGTTTTCAGATTCTT +
Preference number: 5 (lower is better)
Translates to: RLRRQASRFQCIGPRRSQEGVSL*QSFQIL
Trigger: AAGAATCTGAAAACTCTGCAAAAGCGAGACTCCTTC...CTGTGACCTCCTAGGACCAATGCATTGGAACCTGCTTGCTTGCCTCCTGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp AACAGGCATCTCTGGCATCCTTCTCCACGCTCCCTACCCCGACATACACAAAGCTCCTTCTTCATTTGCTaGAGTTGCTCTTGGAACTTG +
Preference number: 5 (lower is better)
Translates to: NRHLWHPSPRSLPRHTQSSFFIC*SCSWNL
Trigger: CAAGTTCCAAGAGCAACTCAAGCAAATGAAGAAGGA...GCTTTGTGTATGTCGGGGTAGGGAGCGTGGAGAAGGATGCCAGAGATGCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp GTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGGGAGGCGCCTCCTCGCTTAATTaGAAGAACATTTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: VTEHLGCFSSMGLSLLGGASSLN*KNISCS
Trigger: GGAACAGGAAATGTTCTTCAAATTAAGCGAGGAGGC...GCCTCCCAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 90 bp AATTTCTTCTTGGCGTTGATTTCTTGTTCAAAACGTTTGTGCATCTaGTCCAGCTGCAGCTCGTGCTTGCTGCTCAGCTGCGTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: NFFLALISCSKRLCI*SSCSSCLLLSCVWF
Trigger: GAACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCACAAACGTTTTGAACAAGAAATCAACGCCAAGAAGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp AAAATAAGATGGGATACAATGTCAGAATCAGCAGAACAGGCATCTCTGGCATCCGTAGGAGGGTCCGACTaGGCAATCTTGAGCAGGACC +
Preference number: 5 (lower is better)
Translates to: KIRWDTMSESAEQASLASVGGSD*AILSRT
Trigger: GGTCCTGCTCAAGATTGCCAAGTCGGACCCTCCTAC...GGATGCCAGAGATGCCTGTTCTGCTGATTCTGACATTGTATCCCATCTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp TGTACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGCGTTTCAGGGTCTTATaGTGCAGTTTTGAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: CTVTEHLGCFSSMGLSLLRFRVL*CSFEPL
Trigger: CAAGGGCTCAAAACTGCACAATAAGACCCTGAAACG...CAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp TGTACTGTAACTGAGCACTTAGGCTGCTTTTCTTCTATGGGGCTCAGCCTCTTGATCCTGGTCAGGGATTaGTTTCTCTTCATCCATCTG +
Preference number: 5 (lower is better)
Translates to: CTVTEHLGCFSSMGLSLLILVRD*FLFIHL
Trigger: CAGATGGATGAAGAGAAACAAATCCCTGACCAGGAT...CAAGAGGCTGAGCCCCATAGAAGAAAAGCAGCCTAAGTGCTCAGTTACAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS-3UTR CAA 90 bp ACTCCCTCCCAAGCACCCAGTTTTCATTTGAGGAAACTTTTTAGAAAGTTGCTTAGCTCCTCCTCGCTCTaGGTCTCTATGACTTTGGCT +
Preference number: 5 (lower is better)
Translates to: TPSQAPSFHLRKLFRKLLSSSSL*VSMTLA
Trigger: AGCCAAAGTCATAGAGACCAAGAGCGAGGAGGAGCT...AAGCAACTTTCTAAAAAGTTTCCTCAAATGAAAACTGGGTGCTTGGGAGGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp TGGCGTAGTCTCGATCCTGCTCCAGGCGGATCCGCTTaGCCTCCTCTTTGCGGCGCACGCTGTGGTCCTGCT +
Preference number: 6 (lower is better)
Translates to: WRSLDPAPGGSA*PPLCGARCGPA
Trigger: AGCAGGACCACAGCGTGCGCCGCAAAGAGGAGGCCAAGCGGATCCGCCTGGAGCAGGATCGAGACTACGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp CTTGGAGTGACAGAGCTGGGGAGTTCCAGGCCACCGTaGGTCAGAGCCTCGCCACCCAAGGTCTCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: LGVTELGSSRPP*VRASPPKVSRA
Trigger: TGCCCTGGAGACCTTGGGTGGCGAGGCTCTGACCAACGGTGGCCTGGAACTCCCCAGCTCTGTCACTCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp CGATCCTGCTCCAGGCGGATCCGCTTGGCCTCCTCTTaGCGGCGCACGCTGTGGTCCTGCTCCATCTTCTCT +
Preference number: 6 (lower is better)
Translates to: RSCSRRIRLASS*RRTLWSCSIFS
Trigger: AGAGAAGATGGAGCAGGACCACAGCGTGCGCCGCAAAGAGGAGGCCAAGCGGATCCGCCTGGAGCAGGATCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp CCGAAGGCGCCGTCTCCCAGCTCGCCCACGATCTCCCATACATCGTaGGGGTCCAGGTCCCGGCGGACGTGCTCATATTCACGGGACTTT +
Preference number: 6 (lower is better)
Translates to: PKAPSPSSPTISHTS*GSRSRRTCSYSRDF
Trigger: AAAGTCCCGTGAATATGAGCACGTCCGCCGGGACCTGGACCCCAACGATGTATGGGAGATCGTGGGCGAGCTGGGAGACGGCGCCTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp GTAGGAGGGTCCGACTTGGCAATCTTGAGCAGGACCCGCATGGGGTaGAGCTCGTGGTGTGGGGGCTCGATCTGCGCCATCTCGATCAGC +
Preference number: 6 (lower is better)
Translates to: VGGSDLAILSRTRMG*SSWCGGSICAISIS
Trigger: GCTGATCGAGATGGCGCAGATCGAGCCCCCACACCACGAGCTCAACCCCATGCGGGTCCTGCTCAAGATTGCCAAGTCGGACCCTCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp CACTTGGAGGGTGTAAGCAGGGTAGGAGGGTCCGACTTGGCAATCTaGAGCAGGACCCGCATGGGGTTGAGCTCGTGGTGTGGGGGCTCG +
Preference number: 6 (lower is better)
Translates to: HLEGVSRVGGSDLAI*SRTRMGLSSWCGGS
Trigger: CGAGCCCCCACACCACGAGCTCAACCCCATGCGGGTCCTGCTCAAGATTGCCAAGTCGGACCCTCCTACCCTGCTTACACCCTCCAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp GATCCTGCTCCAGGCGGATCCGCTTGGCCTCCTCTTTaGGGCGCACGCTGTGGTCCTGCTCCATCTTCTCTA +
Preference number: 6 (lower is better)
Translates to: DPAPGGSAWPPL*GARCGPAPSSL
Trigger: TAGAGAAGATGGAGCAGGACCACAGCGTGCGCCGCAAAGAGGAGGCCAAGCGGATCCGCCTGGAGCAGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp CGTCTCCCAGCTCGCCCACGATCTCCCATACATCGTTaGGGTCCAGGTCCCGGCGGACGTGCTCATATTCAC +
Preference number: 6 (lower is better)
Translates to: RLPARPRSPIHR*GPGPGGRAHIH
Trigger: GTGAATATGAGCACGTCCGCCGGGACCTGGACCCCAACGATGTATGGGAGATCGTGGGCGAGCTGGGAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp CTTGAGCAGGACCCGCATGGGGTTGAGCTCGTGGTGTaGGGGCTCGATCTGCGCCATCTCGATCAGCGTGAT +
Preference number: 6 (lower is better)
Translates to: LEQDPHGVELVV*GLDLRHLDQRD
Trigger: ATCACGCTGATCGAGATGGCGCAGATCGAGCCCCCACACCACGAGCTCAACCCCATGCGGGTCCTGCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp GCAATCTTGAGCAGGACCCGCATGGGGTTGAGCTCGTaGTGTGGGGGCTCGATCTGCGCCATCTCGATCAGC +
Preference number: 6 (lower is better)
Translates to: AILSRTRMGLSS*CGGSICAISIS
Trigger: GCTGATCGAGATGGCGCAGATCGAGCCCCCACACCACGAGCTCAACCCCATGCGGGTCCTGCTCAAGATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp CGGATCCGCTTGGCCTCCTCTTTGCGGCGCACGCTGTaGTCCTGCTCCATCTTCTCTACCTGCTGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: RIRLASSLRRTL*SCSIFSTCCFC
Trigger: GCAGAAGCAGCAGGTAGAGAAGATGGAGCAGGACCACAGCGTGCGCCGCAAAGAGGAGGCCAAGCGGATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp CCGTCTCCCAGCTCGCCCACGATCTCCCATACATCGTaGGGGTCCAGGTCCCGGCGGACGTGCTCATATTCA +
Preference number: 6 (lower is better)
Translates to: PSPSSPTISHTS*GSRSRRTCSYS
Trigger: TGAATATGAGCACGTCCGCCGGGACCTGGACCCCAACGATGTATGGGAGATCGTGGGCGAGCTGGGAGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp TCCGACTTGGCAATCTTGAGCAGGACCCGCATGGGGTaGAGCTCGTGGTGTGGGGGCTCGATCTGCGCCATC +
Preference number: 6 (lower is better)
Translates to: SDLAILSRTRMG*SSWCGGSICAI
Trigger: GATGGCGCAGATCGAGCCCCCACACCACGAGCTCAACCCCATGCGGGTCCTGCTCAAGATTGCCAAGTCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp ATGGCCATGCGCGTCTTGCCGTCGCTCCTCTGGATCTaGGGTAGCCGCGCCTTCTCCTGTTGCTGTCTGACC +
Preference number: 6 (lower is better)
Translates to: MAMRVLPSLLWI*GSRAFSCCCLT
Trigger: GGTCAGACAGCAACAGGAGAAGGCGCGGCTACCCAAGATCCAGAGGAGCGACGGCAAGACGCGCATGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp GAGGCACTGCCCGCACCGTTGATGTGCAGGCTCTTCTaGTACATGGCCATGCGCGTCTTGCCGTCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: EALPAPLMCRLF*YMAMRVLPSLL
Trigger: GAGGAGCGACGGCAAGACGCGCATGGCCATGTACAAGAAGAGCCTGCACATCAACGGTGCGGGCAGTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp TCGCCACCCAAGGTCTCCAGGGCACTGCTGTTAGGTCGGCTCTGGTaGGCCTTTTGGGACTTGCTGGCTGCAGGACTCGGGTTCTCATCC +
Preference number: 6 (lower is better)
Translates to: SPPKVSRALLLGRLW*AFWDLLAAGLGFSS
Trigger: GGATGAGAACCCGAGTCCTGCAGCCAGCAAGTCCCAAAAGGCCAACCAGAGCCGACCTAACAGCAGTGCCCTGGAGACCTTGGGTGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp CGCTGCTCAGAGGCACTGCCCGCACCGTTGATGTGCAGGCTCTTCTaGTACATGGCCATGCGCGTCTTGCCGTCGCTCCTCTGGATCTTG +
Preference number: 6 (lower is better)
Translates to: RCSEALPAPLMCRLF*YMAMRVLPSLLWIL
Trigger: CAAGATCCAGAGGAGCGACGGCAAGACGCGCATGGCCATGTACAAGAAGAGCCTGCACATCAACGGTGCGGGCAGTGCCTCTGAGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS TCA 72 bp TCTTCTCGCGCTGCTCAGAGGCACTGCCCGCACCGTTaGTGTGCAGGCTCTTCTTGTACATGGCCATGCGCG +
Preference number: 6 (lower is better)
Translates to: SSRAAQRHCPHR*CAGSSCTWPCA
Trigger: CGCGCATGGCCATGTACAAGAAGAGCCTGCACATCAACGGTGCGGGCAGTGCCTCTGAGCAGCGCGAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp GGGCACCGGTCTCCTTGTTTTTGGCCTTGTAGACTTTaGCGAAGGCGCCGTCTCCCAGCTCGCCCACGATCT +
Preference number: 6 (lower is better)
Translates to: GHRSPCFWPCRL*RRRRLPARPRS
Trigger: AGATCGTGGGCGAGCTGGGAGACGGCGCCTTCGGCAAAGTCTACAAGGCCAAAAACAAGGAGACCGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp CGGCGCACGCTGTGGTCCTGCTCCATCTTCTCTACCTaGTGCTTCTGCTGCCGCTCCAGGTTTTCTAGCTCC +
Preference number: 6 (lower is better)
Translates to: RRTLWSCSIFST*CFCCRSRFSSS
Trigger: GGAGCTAGAAAACCTGGAGCGGCAGCAGAAGCAGCAGGTAGAGAAGATGGAGCAGGACCACAGCGTGCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp TGTGCAGGCTCTTCTTGTACATGGCCATGCGCGTCTTaGCGTCGCTCCTCTGGATCTTGGGTAGCCGCGCCT +
Preference number: 6 (lower is better)
Translates to: CAGSSCTWPCAS*RRSSGSWVAAP
Trigger: AGGCGCGGCTACCCAAGATCCAGAGGAGCGACGGCAAGACGCGCATGGCCATGTACAAGAAGAGCCTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp TCGCGCTGCTCAGAGGCACTGCCCGCACCGTTGATGTaGAGGCTCTTCTTGTACATGGCCATGCGCGTCTTG +
Preference number: 6 (lower is better)
Translates to: SRCSEALPAPLM*RLFLYMAMRVL
Trigger: CAAGACGCGCATGGCCATGTACAAGAAGAGCCTGCACATCAACGGTGCGGGCAGTGCCTCTGAGCAGCGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp TCCTCCTGCTGGGAGAACTGCTTGATCTTCTCGCGCTaGTCAGAGGCACTGCCCGCACCGTTGATGTGCAGG +
Preference number: 6 (lower is better)
Translates to: SSCWENCLIFSR*SEALPAPLMCR
Trigger: CCTGCACATCAACGGTGCGGGCAGTGCCTCTGAGCAGCGCGAGAAGATCAAGCAGTTCTCCCAGCAGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp CCCAAGGTCTCCAGGGCACTGCTGTTAGGTCGGCTCTaGTTGGCCTTTTGGGACTTGCTGGCTGCAGGACTC +
Preference number: 6 (lower is better)
Translates to: PKVSRALLLGRL*LAFWDLLAAGL
Trigger: GAGTCCTGCAGCCAGCAAGTCCCAAAAGGCCAACCAGAGCCGACCTAACAGCAGTGCCCTGGAGACCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp AAGGTCTCCAGGGCACTGCTGTTAGGTCGGCTCTGGTaGGCCTTTTGGGACTTGCTGGCTGCAGGACTCGGG +
Preference number: 6 (lower is better)
Translates to: KVSRALLLGRLW*AFWDLLAAGLG
Trigger: CCCGAGTCCTGCAGCCAGCAAGTCCCAAAAGGCCAACCAGAGCCGACCTAACAGCAGTGCCCTGGAGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp ATGTGCAGGCTCTTCTTGTACATGGCCATGCGCGTCTaGCCGTCGCTCCTCTGGATCTTGGGTAGCCGCGCC +
Preference number: 6 (lower is better)
Translates to: MCRLFLYMAMRV*PSLLWILGSRA
Trigger: GGCGCGGCTACCCAAGATCCAGAGGAGCGACGGCAAGACGCGCATGGCCATGTACAAGAAGAGCCTGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp CAAGGTCTCCAGGGCACTGCTGTTAGGTCGGCTCTGGTTGGCCTTTaGGGACTTGCTGGCTGCAGGACTCGGGTTCTCATCCTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: QGLQGTAVRSALVGL*GLAGCRTRVLILVR
Trigger: CCTGACCAGGATGAGAACCCGAGTCCTGCAGCCAGCAAGTCCCAAAAGGCCAACCAGAGCCGACCTAACAGCAGTGCCCTGGAGACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp GCACCGTTGATGTGCAGGCTCTTCTTGTACATGGCCATGCGCGTCTaGCCGTCGCTCCTCTGGATCTTGGGTAGCCGCGCCTTCTCCTGT +
Preference number: 6 (lower is better)
Translates to: APLMCRLFLYMAMRV*PSLLWILGSRAFSC
Trigger: ACAGGAGAAGGCGCGGCTACCCAAGATCCAGAGGAGCGACGGCAAGACGCGCATGGCCATGTACAAGAAGAGCCTGCACATCAACGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp CTGCTCAGCTGCGTCTGGTTCCGATGTTCTTCTTTCTaGAGAAGCCGAAGCTCTCGGAGCTCCTGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: LLSCVWFRCSSF*RSRSSRSSWRL
Trigger: CAGGCGCCAGGAGCTCCGAGAGCTTCGGCTTCTGCAGAAAGAAGAACATCGGAACCAGACGCAGCTGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp CTCCTCTGGATCTTGGGTAGCCGCGCCTTCTCCTGTTaGTGTCTGACCTTCAGCTGCTCCATCATGCGCTGG +
Preference number: 6 (lower is better)
Translates to: LLWILGSRAFSC*CLTFSCSIMRW
Trigger: CCAGCGCATGATGGAGCAGCTGAAGGTCAGACAGCAACAGGAGAAGGCGCGGCTACCCAAGATCCAGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp TCATTCTTGGAGAGCCCATCTGCAGGGCTGGTGGTTTaGAGGGGTCCATCCCCAGAGGGTTGGCTACAGGAC +
Preference number: 6 (lower is better)
Translates to: SFLESPSAGLVV*RGPSPEGWLQD
Trigger: GTCCTGTAGCCAACCCTCTGGGGATGGACCCCTCCAAACCACCAGCCCTGCAGATGGGCTCTCCAAGAATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp AGGGCACTGCTGTTAGGTCGGCTCTGGTTGGCCTTTTaGGACTTGCTGGCTGCAGGACTCGGGTTCTCATCC +
Preference number: 6 (lower is better)
Translates to: RALLLGRLWLAF*DLLAAGLGFSS
Trigger: GGATGAGAACCCGAGTCCTGCAGCCAGCAAGTCCCAAAAGGCCAACCAGAGCCGACCTAACAGCAGTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp TTGTACATGGCCATGCGCGTCTTGCCGTCGCTCCTCTaGATCTTGGGTAGCCGCGCCTTCTCCTGTTGCTGT +
Preference number: 6 (lower is better)
Translates to: LYMAMRVLPSLL*ILGSRAFSCCC
Trigger: ACAGCAACAGGAGAAGGCGCGGCTACCCAAGATCCAGAGGAGCGACGGCAAGACGCGCATGGCCATGTACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp CGTGGCCGAAGCTTGTCTCGCCATTCCTTCAGGCTCTaGTTGTGGCTCTCATCCAGGGCCTTCAGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: RGRSLSRHSFRL*LWLSSRAFSFW
Trigger: CCAGAAGCTGAAGGCCCTGGATGAGAGCCACAACCAGAGCCTGAAGGAATGGCGAGACAAGCTTCGGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp GGTGTAAGCAGGGTAGGAGGGTCCGACTTGGCAATCTaGAGCAGGACCCGCATGGGGTTGAGCTCGTGGTGT +
Preference number: 6 (lower is better)
Translates to: GVSRVGGSDLAI*SRTRMGLSSWC
Trigger: ACACCACGAGCTCAACCCCATGCGGGTCCTGCTCAAGATTGCCAAGTCGGACCCTCCTACCCTGCTTACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp CACTTGGAGGGTGTAAGCAGGGTAGGAGGGTCCGACTaGGCAATCTTGAGCAGGACCCGCATGGGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: HLEGVSRVGGSD*AILSRTRMGLS
Trigger: GCTCAACCCCATGCGGGTCCTGCTCAAGATTGCCAAGTCGGACCCTCCTACCCTGCTTACACCCTCCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp CCCTGCCATCCTCAATCTCCTCCATTACCTCCGCCTTaGCCTCGGCCACCAGCTCCCGAAGAGCCTTATTGC +
Preference number: 6 (lower is better)
Translates to: PCHPQSPPLPPP*PRPPAPEEPYC
Trigger: GCAATAAGGCTCTTCGGGAGCTGGTGGCCGAGGCAAAGGCGGAGGTAATGGAGGAGATTGAGGATGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp CAGGGCACTGCTGTTAGGTCGGCTCTGGTTGGCCTTTaGGGACTTGCTGGCTGCAGGACTCGGGTTCTCATC +
Preference number: 6 (lower is better)
Translates to: QGTAVRSALVGL*GLAGCRTRVLI
Trigger: GATGAGAACCCGAGTCCTGCAGCCAGCAAGTCCCAAAAGGCCAACCAGAGCCGACCTAACAGCAGTGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp ATCTTCTCGCGCTGCTCAGAGGCACTGCCCGCACCGTaGATGTGCAGGCTCTTCTTGTACATGGCCATGCGC +
Preference number: 6 (lower is better)
Translates to: IFSRCSEALPAP*MCRLFLYMAMR
Trigger: GCGCATGGCCATGTACAAGAAGAGCCTGCACATCAACGGTGCGGGCAGTGCCTCTGAGCAGCGCGAGAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp TCCACAGACCACTTGGAGGGTGTAAGCAGGGTAGGAGGGTCCGACTaGGCAATCTTGAGCAGGACCCGCATGGGGTTGAGCTCGTGGTGT +
Preference number: 6 (lower is better)
Translates to: STDHLEGVSRVGGSD*AILSRTRMGLSSWC
Trigger: ACACCACGAGCTCAACCCCATGCGGGTCCTGCTCAAGATTGCCAAGTCGGACCCTCCTACCCTGCTTACACCCTCCAAGTGGTCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp ATTACCTCCGCCTTTGCCTCGGCCACCAGCTCCCGAAGAGCCTTATaGCTGGTGACTCTGCTGACGAAGGGATGCTGCAGCAGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: ITSAFASATSSRRAL*LVTLLTKGCCSSCA
Trigger: TGCACAGCTGCTGCAGCATCCCTTCGTCAGCAGAGTCACCAGCAATAAGGCTCTTCGGGAGCTGGTGGCCGAGGCAAAGGCGGAGGTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp TTCTTGTACATGGCCATGCGCGTCTTGCCGTCGCTCCTCTGGATCTaGGGTAGCCGCGCCTTCTCCTGTTGCTGTCTGACCTTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: FLYMAMRVLPSLLWI*GSRAFSCCCLTFSC
Trigger: GCAGCTGAAGGTCAGACAGCAACAGGAGAAGGCGCGGCTACCCAAGATCCAGAGGAGCGACGGCAAGACGCGCATGGCCATGTACAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp AACTGCTTGATCTTCTCGCGCTGCTCAGAGGCACTGCCCGCACCGTaGATGTGCAGGCTCTTCTTGTACATGGCCATGCGCGTCTTGCCG +
Preference number: 6 (lower is better)
Translates to: NCLIFSRCSEALPAP*MCRLFLYMAMRVLP
Trigger: CGGCAAGACGCGCATGGCCATGTACAAGAAGAGCCTGCACATCAACGGTGCGGGCAGTGCCTCTGAGCAGCGCGAGAAGATCAAGCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp GACAGTGGCCGGGACTTCCGGAGGGGAACAGGCACCTTTAAGTCATaGTCATTCTTGGAGAGCCCATCTGCAGGGCTGGTGGTTTGGAGG +
Preference number: 6 (lower is better)
Translates to: DSGRDFRRGTGTFKS*SFLESPSAGLVVWR
Trigger: CCTCCAAACCACCAGCCCTGCAGATGGGCTCTCCAAGAATGACAATGACTTAAAGGTGCCTGTTCCCCTCCGGAAGTCCCGGCCACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp CTTACGCAGCAGGTCATGCCGCTGCAGGAAGTACTGGTCCTTCAGTaGCTGCTTCACCAGCTGATGTCGCTCCTGCAACTGGTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: LTQQVMPLQEVLVLQ*LLHQLMSLLQLVLL
Trigger: GAGGAGCACCAGTTGCAGGAGCGACATCAGCTGGTGAAGCAGCAACTGAAGGACCAGTACTTCCTGCAGCGGCATGACCTGCTGCGTAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS TCA 72 bp TGTAGTCCTCCAGCTCCTCCTCGCTCTTGGTCTCTATaGCTTTGGCTGCTGCCAGGGCACCGGTCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: CSPPAPPRSWSL*LWLLPGHRSPC
Trigger: ACAAGGAGACCGGTGCCCTGGCAGCAGCCAAAGTCATAGAGACCAAGAGCGAGGAGGAGCTGGAGGACTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS TCA 72 bp AAGTTGAGAGCCTCCAACATCTGGCGGCATACGACCTaGATCTGGGGCTCAGTGAGGCCTCGATCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: KLRASNIWRHTT*IWGSVRPRSSS
Trigger: GGAGCTGGATCGAGGCCTCACTGAGCCCCAGATTCAGGTCGTATGCCGCCAGATGTTGGAGGCTCTCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS TCA 72 bp GGATCTTGGGTAGCCGCGCCTTCTCCTGTTGCTGTCTaGCCTTCAGCTGCTCCATCATGCGCTGGTTGTAGC +
Preference number: 6 (lower is better)
Translates to: GSWVAAPSPVAV*PSAAPSCAGCS
Trigger: GCTACAACCAGCGCATGATGGAGCAGCTGAAGGTCAGACAGCAACAGGAGAAGGCGCGGCTACCCAAGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp AGGGCCGCCTCACGGTCTCGGAGGAGCTCCTGCTTCTaGCTAAGGCAATCTCGTTCCTTGTCGCAGATCTCA +
Preference number: 6 (lower is better)
Translates to: RAASRSRRSSCF*LRQSRSLSQIS
Trigger: TGAGATCTGCGACAAGGAACGAGATTGCCTTAGCAAGAAGCAGGAGCTCCTCCGAGACCGTGAGGCGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp TCCCATACATCGTTGGGGTCCAGGTCCCGGCGGACGTaGTCATATTCACGGGACTTTCTCTTCTCGAAGGTG +
Preference number: 6 (lower is better)
Translates to: SHTSLGSRSRRT*SYSRDFLFSKV
Trigger: CACCTTCGAGAAGAGAAAGTCCCGTGAATATGAGCACGTCCGCCGGGACCTGGACCCCAACGATGTATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp CAGCTCCTCCTCGCTCTTGGTCTCTATGACTTTGGCTaGTGCCAGGGCACCGGTCTCCTTGTTTTTGGCCTT +
Preference number: 6 (lower is better)
Translates to: QLLLALGLYDFG*CQGTGLLVFGL
Trigger: AAGGCCAAAAACAAGGAGACCGGTGCCCTGGCAGCAGCCAAAGTCATAGAGACCAAGAGCGAGGAGGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp CGCTCCTTCTCATGCTTACGCAGCAGGTCATGCCGCTaGAGGAAGTACTGGTCCTTCAGTTGCTGCTTCACC +
Preference number: 6 (lower is better)
Translates to: RSFSCLRSRSCR*RKYWSFSCCFT
Trigger: GGTGAAGCAGCAACTGAAGGACCAGTACTTCCTGCAGCGGCATGACCTGCTGCGTAAGCATGAGAAGGAGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp TGTTCCCGCTCCTTCTCATGCTTACGCAGCAGGTCATaGCGCTGCAGGAAGTACTGGTCCTTCAGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: CSRSFSCLRSRS*RCRKYWSFSCC
Trigger: GCAGCAACTGAAGGACCAGTACTTCCTGCAGCGGCATGACCTGCTGCGTAAGCATGAGAAGGAGCGGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp CCCCCAGGAGCTTCACGATATACGGGTGGTCACAGGTaGCCAGGATCTCTATCTCCACGATGTAGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PPGASRYTGGHR*PGSLSPRCSPP
Trigger: TGGAGGACTACATCGTGGAGATAGAGATCCTGGCCACCTGTGACCACCCGTATATCGTGAAGCTCCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp GTAGACAGGTTGCTACAGTCCGAGGCCCTCTTAGAATaGCTTGGAGTGACAGAGCTGGGGAGTTCCAGGCCA +
Preference number: 6 (lower is better)
Translates to: VDRLLQSEALLE*LGVTELGSSRP
Trigger: TGGCCTGGAACTCCCCAGCTCTGTCACTCCAAGCCATTCTAAGAGGGCCTCGGACTGTAGCAACCTGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp TCCAGCTGCAGCTCGTGCTTGCTGCTCAGCTGCGTCTaGTTCCGATGTTCTTCTTTCTGCAGAAGCCGAAGC +
Preference number: 6 (lower is better)
Translates to: SSCSSCLLLSCV*FRCSSFCRSRS
Trigger: GCTTCGGCTTCTGCAGAAAGAAGAACATCGGAACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp TCCTCCAGCTCCTCCTCGCTCTTGGTCTCTATGACTTaGGCTGCTGCCAGGGCACCGGTCTCCTTGTTTTTG +
Preference number: 6 (lower is better)
Translates to: SSSSSSLLVSMT*AAARAPVSLFL
Trigger: CAAAAACAAGGAGACCGGTGCCCTGGCAGCAGCCAAAGTCATAGAGACCAAGAGCGAGGAGGAGCTGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp CGGGACTTCCGGAGGGGAACAGGCACCTTTAAGTCATaGTCATTCTTGGAGAGCCCATCTGCAGGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: RDFRRGTGTFKS*SFLESPSAGLV
Trigger: CACCAGCCCTGCAGATGGGCTCTCCAAGAATGACAATGACTTAAAGGTGCCTGTTCCCCTCCGGAAGTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp CGGTCTCGGAGGAGCTCCTGCTTCTTGCTAAGGCAATCTCGTTCCTaGTCGCAGATCTCACGCCTGTTTTCCGTGGTGAGCTTCCTCATG +
Preference number: 6 (lower is better)
Translates to: RSRRSSCFLLRQSRS*SQISRLFSVVSFLM
Trigger: CATGAGGAAGCTCACCACGGAAAACAGGCGTGAGATCTGCGACAAGGAACGAGATTGCCTTAGCAAGAAGCAGGAGCTCCTCCGAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp CTCCTCCTCGCTCTTGGTCTCTATGACTTTGGCTGCTaGCAGGGCACCGGTCTCCTTGTTTTTGGCCTTGTA +
Preference number: 6 (lower is better)
Translates to: LLLALGLYDFGC*QGTGLLVFGLV
Trigger: TACAAGGCCAAAAACAAGGAGACCGGTGCCCTGGCAGCAGCCAAAGTCATAGAGACCAAGAGCGAGGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp ATCTGCTCCAGCTGCAGCTCGTGCTTGCTGCTCAGCTaGGTCTGGTTCCGATGTTCTTCTTTCTGCAGAAGC +
Preference number: 6 (lower is better)
Translates to: ICSSCSSCLLLS*VWFRCSSFCRS
Trigger: GCTTCTGCAGAAAGAAGAACATCGGAACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGAGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp AGATGTCAGCCTTGTAGTCATAGGGGGCGTCCTTCATaGTTTCACACAGCACCACCTCAGGGGCCATCCAGT +
Preference number: 6 (lower is better)
Translates to: RCQPCSHRGRPS*FHTAPPQGPSS
Trigger: ACTGGATGGCCCCTGAGGTGGTGCTGTGTGAAACCATGAAGGACGCCCCCTATGACTACAAGGCTGACATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp CGGAGGGGAACAGGCACCTTTAAGTCATTGTCATTCTaGGAGAGCCCATCTGCAGGGCTGGTGGTTTGGAGG +
Preference number: 6 (lower is better)
Translates to: RRGTGTFKSLSF*ESPSAGLVVWR
Trigger: CCTCCAAACCACCAGCCCTGCAGATGGGCTCTCCAAGAATGACAATGACTTAAAGGTGCCTGTTCCCCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp AAATCCTCTTCCAGGGCCTTTTTGCGTGGCCGAAGCTaGTCTCGCCATTCCTTCAGGCTCTGGTTGTGGCTC +
Preference number: 6 (lower is better)
Translates to: KSSSRAFLRGRS*SRHSFRLWLWL
Trigger: GAGCCACAACCAGAGCCTGAAGGAATGGCGAGACAAGCTTCGGCCACGCAAAAAGGCCCTGGAAGAGGATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp TTTTTGCGTGGCCGAAGCTTGTCTCGCCATTCCTTCAGGCTCTGGTaGTGGCTCTCATCCAGGGCCTTCAGCTTCTGGGTTTCATGCTCT +
Preference number: 6 (lower is better)
Translates to: FLRGRSLSRHSFRLW*WLSSRAFSFWVSCS
Trigger: AGAGCATGAAACCCAGAAGCTGAAGGCCCTGGATGAGAGCCACAACCAGAGCCTGAAGGAATGGCGAGACAAGCTTCGGCCACGCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS TCA 72 bp TGGCATCCACAGCTCCCCCAGGGCAGAACTCAATCATaGTCCAGAGCTTCCCATCATAGTAATAGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: WHPQLPQGRTQS*SRASHHSNRPP
Trigger: TGGGGGCCTATTACTATGATGGGAAGCTCTGGATCATGATTGAGTTCTGCCCTGGGGGAGCTGTGGATGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp GTTTGTGCATCTGCTCCAGCTGCAGCTCGTGCTTGCTaGTCAGCTGCGTCTGGTTCCGATGTTCTTCTTTCT +
Preference number: 6 (lower is better)
Translates to: VCASAPAAARAC*SAASGSDVLLS
Trigger: AGAAAGAAGAACATCGGAACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCACAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp AACGTTTGTGCATCTGCTCCAGCTGCAGCTCGTGCTTaGTGCTCAGCTGCGTCTGGTTCCGATGTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: NVCASAPAAARA*CSAASGSDVLL
Trigger: AAGAAGAACATCGGAACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCACAAACGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp TCAAAACGTTTGTGCATCTGCTCCAGCTGCAGCTCGTaGTTGCTGCTCAGCTGCGTCTGGTTCCGATGTTCT +
Preference number: 6 (lower is better)
Translates to: SKRLCICSSCSS*LLLSCVWFRCS
Trigger: AGAACATCGGAACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCACAAACGTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp TGCAGCTGCTGTAGCTCGCTCATGTTGCTTTCACACTaGGCCACCATGTCTCGCATCTGGTTCTCGTGTTTC +
Preference number: 6 (lower is better)
Translates to: CSCCSSLMLLSH*ATMSRIWFSCF
Trigger: GAAACACGAGAACCAGATGCGAGACATGGTGGCGCAGTGTGAAAGCAACATGAGCGAGCTACAGCAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp ATGCTGCAGCAGCTGTGCAGCACTGGGCCGGGTTTCTaGGTTCTTATCCAAGGCTATCTTCAGAAAGTCTCG +
Preference number: 6 (lower is better)
Translates to: MLQQLCSTGPGF*VLIQGYLQKVS
Trigger: CGAGACTTTCTGAAGATAGCCTTGGATAAGAACCCAGAAACCCGGCCCAGTGCTGCACAGCTGCTGCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp AGGAGCTCCTGCTTCTTGCTAAGGCAATCTCGTTCCTaGTCGCAGATCTCACGCCTGTTTTCCGTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: RSSCFLLRQSRS*SQISRLFSVVS
Trigger: GCTCACCACGGAAAACAGGCGTGAGATCTGCGACAAGGAACGAGATTGCCTTAGCAAGAAGCAGGAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS TCA 72 bp TTGGCTACAAAGTCCCGGTCCAGCCGCTGTTTCTTCTaGGAGTGTTCCTCCATCTTCTGCTTCATGCTCTCC +
Preference number: 6 (lower is better)
Translates to: LATKSRSSRCFF*ECSSIFCFMLS
Trigger: GGAGAGCATGAAGCAGAAGATGGAGGAACACTCTCAGAAGAAACAGCGGCTGGACCGGGACTTTGTAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp ACCACAAACCGGCGGGTCCGTTTCAGGGTCTTATTGTaGAGTTTTGAGCCCTTGAGAGACAATGAGCCCGTT +
Preference number: 6 (lower is better)
Translates to: TTNRRVRFRVLL*SFEPLRDNEPV
Trigger: AACGGGCTCATTGTCTCTCAAGGGCTCAAAACTGCACAATAAGACCCTGAAACGGACCCGCCGGTTTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CCA 72 bp TTTGTTTCTCTTCATCCATCTGAATTCTGGCATCCATaGACAGTGGCCGGGACTTCCGGAGGGGAACAGGCA +
Preference number: 6 (lower is better)
Translates to: FVSLHPSEFWHP*TVAGTSGGEQA
Trigger: TGCCTGTTCCCCTCCGGAAGTCCCGGCCACTGTCCATGGATGCCAGAATTCAGATGGATGAAGAGAAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp CACTTTTCATTCTGCAGCTGCTGTAGCTCGCTCATGTaGCTTTCACACTGCGCCACCATGTCTCGCATCTGG +
Preference number: 6 (lower is better)
Translates to: HFSFCSCCSSLM*LSHCATMSRIW
Trigger: CCAGATGCGAGACATGGTGGCGCAGTGTGAAAGCAACATGAGCGAGCTACAGCAGCTGCAGAATGAAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp GGTGTGGTGGGTCTGGGCTCTGCCTCCTCGCTTAATTaGAAGAACATTTCCTGTTCCCGCTTCTTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: GVVGLGSASSLN*KNISCSRFFWF
Trigger: GAACCAGAAGAAGCGGGAACAGGAAATGTTCTTCAAATTAAGCGAGGAGGCAGAGCCCAGACCCACCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp GGACTTGCTGGCTGCAGGACTCGGGTTCTCATCCTGGTCAGGGATTaGTTTCTCTTCATCCATCTGAATTCTGGCATCCATGGACAGTGG +
Preference number: 6 (lower is better)
Translates to: GLAGCRTRVLILVRD*FLFIHLNSGIHGQW
Trigger: CCACTGTCCATGGATGCCAGAATTCAGATGGATGAAGAGAAACAAATCCCTGACCAGGATGAGAACCCGAGTCCTGCAGCCAGCAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp TCCACACCATCCACCACAAACCGGCGGGTCCGTTTCAGGGTCTTATaGTGCAGTTTTGAGCCCTTGAGAGACAATGAGCCCGTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: STPSTTNRRVRFRVL*CSFEPLRDNEPVSL
Trigger: CAAAGAAACGGGCTCATTGTCTCTCAAGGGCTCAAAACTGCACAATAAGACCCTGAAACGGACCCGCCGGTTTGTGGTGGATGGTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp CTCAACCTCACTCTTCACCTCCTTCTTCATTTGCTTGAGTTGCTCTaGGAACTTGGCGTAGTCTCGATCCTGCTCCAGGCGGATCCGCTT +
Preference number: 6 (lower is better)
Translates to: LNLTLHLLLHLLELL*ELGVVSILLQADPL
Trigger: AAGCGGATCCGCCTGGAGCAGGATCGAGACTACGCCAAGTTCCAAGAGCAACTCAAGCAAATGAAGAAGGAGGTGAAGAGTGAGGTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 90 bp AACCGGCGGGTCCGTTTCAGGGTCTTATTGTGCAGTTTTGAGCCCTaGAGAGACAATGAGCCCGTTTCTTTGTTCAGTGACAGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: NRRVRFRVLLCSFEP*RDNEPVSLFSDRSA
Trigger: TGCTGACCTGTCACTGAACAAAGAAACGGGCTCATTGTCTCTCAAGGGCTCAAAACTGCACAATAAGACCCTGAAACGGACCCGCCGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS TCA 72 bp GTGTGGTGGGTCTGGGCTCTGCCTCCTCGCTTAATTTaGAGAACATTTCCTGTTCCCGCTTCTTCTGGTTCA +
Preference number: 6 (lower is better)
Translates to: VWWVWALPPRLI*RTFPVPASSGS
Trigger: TGAACCAGAAGAAGCGGGAACAGGAAATGTTCTTCAAATTAAGCGAGGAGGCAGAGCCCAGACCCACCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp ATTTCTTGTTCAAAACGTTTGTGCATCTGCTCCAGCTaGAGCTCGTGCTTGCTGCTCAGCTGCGTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: ISCSKRLCICSS*SSCLLLSCVWF
Trigger: GAACCAGACGCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCACAAACGTTTTGAACAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp TTGGCGTTGATTTCTTGTTCAAAACGTTTGTGCATCTaGTCCAGCTGCAGCTCGTGCTTGCTGCTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LALISCSKRLCI*SSCSSCLLLSC
Trigger: GCAGCTGAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCACAAACGTTTTGAACAAGAAATCAACGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp ACTTTTCATTCTGCAGCTGCTGTAGCTCGCTCATGTTaGTTTCACACTGCGCCACCATGTCTCGCATCTGGT +
Preference number: 6 (lower is better)
Translates to: TFHSAAAVARSC*FHTAPPCLASG
Trigger: ACCAGATGCGAGACATGGTGGCGCAGTGTGAAAGCAACATGAGCGAGCTACAGCAGCTGCAGAATGAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS CAA 72 bp ACTCTTCACCTCCTTCTTCATTTGCTTGAGTTGCTCTaGGAACTTGGCGTAGTCTCGATCCTGCTCCAGGCG +
Preference number: 6 (lower is better)
Translates to: TLHLLLHLLELL*ELGVVSILLQA
Trigger: CGCCTGGAGCAGGATCGAGACTACGCCAAGTTCCAAGAGCAACTCAAGCAAATGAAGAAGGAGGTGAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4
CDS GCA 72 bp TTCTTCTTGGCGTTGATTTCTTGTTCAAAACGTTTGTaGATCTGCTCCAGCTGCAGCTCGTGCTTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: FFLALISCSKRL*ICSSCSSCLLL
Trigger: GAGCAGCAAGCACGAGCTGCAGCTGGAGCAGATGCACAAACGTTTTGAACAAGAAATCAACGCCAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102821.4