Pregenerated sensors for STIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024966Ensembl transcript IDs: ENSMUST00000025918.9
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CAACTATGGGGGAGCAGCCGAGACAGTGACGGGGAGGCTAGGACTGGGCAGGGATGGGAGGGCCCGAGGTaGCGCTGGATGAGTCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: QLWGSSRDSDGEARTGQGWEGPR*RWMSLS Trigger: AGACAGACTCATCCAGCGCCACCTCGGGCCCTCCCA...TCCCTGCCCAGTCCTAGCCTCCCCGTCACTGTCTCGGCTGCTCCCCCATAGTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR CCA 90 bp | GTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGAAGAGGGGGCTTGGGCTCCTTTTTaGGAGGAGGTGGGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: VLLATFPARLPHWRREEGAWAPF*EEVGVG Trigger: CCCCACCCCCACCTCCTCCCAAAAAGGAGCCCAAGC...CCCCTCTTCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR TCA 90 bp | CTGCCCAGTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGATGTAGGTGGGGTCACTaGGCAGCGACCTTGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LPSAARHLPSSPSSLAKGCRWGH*AATLSW Trigger: CCAGGACAAGGTCGCTGCTCAGTGACCCCACCTACA...TCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCACTGGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR TCA 90 bp | CTGCCCAGTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGACCTGCTGGCACTTCTTaGGCACATCTGGGGTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: LPSAARHLPSSPSSLAKGPAGTS*AHLGFG Trigger: ACCGAACCCCAGATGTGCTCAAGAAGTGCCAGCAGG...TCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCACTGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | TCTGCCCAGTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGTGGGGGTGGGGGTGTTaGTGCCTCTTCCTCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: SAQCCSPPSQLAFLIGEGWGWGC*CLFLFI Trigger: GATGAAGAGGAAGAGGCAGCAACACCCCCACCCCCA...CCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCACTGGGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | CAACTATGGGGGAGCAGCCGAGACAGTGACGGGGAGGCTAGGACTGGGCAGGGAGGGTCACTCATTATCTaGTGCACCTCAGGGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QLWGSSRDSDGEARTGQGGSLII*CTSGSA Trigger: GGCTGACCCTGAGGTGCAGCAGATAATGAGTGACCC...TCCCTGCCCAGTCCTAGCCTCCCCGTCACTGTCTCGGCTGCTCCCCCATAGTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR TCA 90 bp | GTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGAAGAGGGGACTCCTCACAGTCCTTaGGTGCCAGCTGAAACTCCA | + |
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Preference number: 4 (lower is better) Translates to: VLLATFPARLPHWRREEGTPHSP*VPAETP Trigger: TGGAGTTTCAGCTGGCACTCAAGGACTGTGAGGAGT...CCCCTCTTCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | CGAGACAGTGACGGGGAGGCTAGGACTGGGCAGGGAAGGACACTCGGATTGAGGCTGGCCTCCATGTTCTaGAAGCCCTCCTTAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RDSDGEARTGQGRTLGLRLASMF*KPSLSW Trigger: CCAGCTTAAGGAGGGCTTGCAGAACATGGAGGCCAG...CCTCAATCCGAGTGTCCTTCCCTGCCCAGTCCTAGCCTCCCCGTCACTGTCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | CGAGACAGTGACGGGGAGGCTAGGACTGGGCAGGGAAGGACACTCGGATTGAGGGGGTGGGGGTGTTGCTaGCTCTTCCTCTTCATCCAT | + |
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Preference number: 4 (lower is better) Translates to: RDSDGEARTGQGRTLGLRGWGCC*LFLFIH Trigger: ATGGATGAAGAGGAAGAGGCAGCAACACCCCCACCC...CCTCAATCCGAGTGTCCTTCCCTGCCCAGTCCTAGCCTCCCCGTCACTGTCTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR CCA 90 bp | GTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGAAGAGGGGAAGGTTGGCTCTAGCTaGATGCACTCCTCACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VLLATFPARLPHWRREEGKVGSS*MHSSQS Trigger: GGACTGTGAGGAGTGCATCCAGCTAGAGCCAACCTT...CCCCTCTTCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | TCTGCCCAGTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGAGGCTGCAGAGCGATTaGTGTAGAGCACATGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SAQCCSPPSQLAFLIGEGRLQSD*CRAHGS Trigger: AGAACCATGTGCTCTACAGCAATCGCTCTGCAGCCT...CCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCACTGGGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | TATGGGGGAGCAGCCGAGACAGTGACGGGGAGGCTAGGACTGGGCAGGGAAGGATTTCTTGGCGTAGGCTaGAGAGCGATTGCTGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: YGGAAETVTGRLGLGREGFLGVG*RAIAVE Trigger: CTCTACAGCAATCGCTCTGCAGCCTACGCCAAGAAA...TCCTTCCCTGCCCAGTCCTAGCCTCCCCGTCACTGTCTCGGCTGCTCCCCCATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | TCTGCCCAGTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGTCTGACGGCTTGTTCTaGAGCTGTTCTATGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SAQCCSPPSQLAFLIGEGSDGLF*SCSMSS Trigger: GGAGCTCATAGAACAGCTGCAGAACAAGCCGTCAGA...CCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCACTGGGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | CTGCCCAGTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGACTTCCTCTTCATCCATaGTGCCCAGATCAACCCCAA | + |
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Preference number: 4 (lower is better) Translates to: LPSAARHLPSSPSSLAKGLPLHP*CPDQPQ Trigger: TTGGGGTTGATCTGGGCAGCATGGATGAAGAGGAAG...TCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCACTGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | TCTGCCCAGTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGGGGTCCTTTTGCATCTaGTCCAGGATGAGTCTCATG | + |
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Preference number: 4 (lower is better) Translates to: SAQCCSPPSQLAFLIGEGGSFCI*SRMSLM Trigger: CATGAGACTCATCCTGGAGCAGATGCAAAAGGACCC...CCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCACTGGGCAGA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR CCA 90 bp | CAACTATGGGGGAGCAGCCGAGACAGTGACGGGGAGGCTAGGACTGGGCAGGGACTGTATAGTGCTTCATaGCTTGGGGGTAGTCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: QLWGSSRDSDGEARTGQGLYSAS*LGGSPL Trigger: AAGGGGACTACCCCCAAGCCATGAAGCACTATACAG...TCCCTGCCCAGTCCTAGCCTCCCCGTCACTGTCTCGGCTGCTCCCCCATAGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | CAACTATGGGGGAGCAGCCGAGACAGTGACGGGGAGGCTAGGACTGGGCAGGGATCTGGAAGCATTCGTTaGCCTTGTTCTTCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QLWGSSRDSDGEARTGQGSGSIR*PCSSPP Trigger: TGGAGGAGAAGAACAAGGGCAACGAATGCTTCCAGA...TCCCTGCCCAGTCCTAGCCTCCCCGTCACTGTCTCGGCTGCTCCCCCATAGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | CGAGACAGTGACGGGGAGGCTAGGACTGGGCAGGGAAGGACACTCGGATTGAGGTCACTCATTATCTGCTaGACCTCAGGGTCAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: RDSDGEARTGQGRTLGLRSLIIC*TSGSAM Trigger: CATGGCTGACCCTGAGGTGCAGCAGATAATGAGTGA...CCTCAATCCGAGTGTCCTTCCCTGCCCAGTCCTAGCCTCCCCGTCACTGTCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | CGAGACAGTGACGGGGAGGCTAGGACTGGGCAGGGAAGGACACTCGGATTGAGGCACTCAGGGCCTTATTaGCCTTCTCCTTTAGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RDSDGEARTGQGRTLGLRHSGPY*PSPLAH Trigger: ATGAGCTAAAGGAGAAGGGCAATAAGGCCCTGAGTG...CCTCAATCCGAGTGTCCTTCCCTGCCCAGTCCTAGCCTCCCCGTCACTGTCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | CGAGACAGTGACGGGGAGGCTAGGACTGGGCAGGGAAGGACACTCGGATTGAGGCATGAATTTCCTCTCTaGCAACCTGGCCTCCATGTT | + |
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Preference number: 4 (lower is better) Translates to: RDSDGEARTGQGRTLGLRHEFPL*QPGLHV Trigger: AACATGGAGGCCAGGTTGGCAGAGAGGAAATTCATG...CCTCAATCCGAGTGTCCTTCCCTGCCCAGTCCTAGCCTCCCCGTCACTGTCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | CTGCCCAGTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGAAGAATTTTCTCTGCCTaGTGGCACTTCTTGAGCACA | + |
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Preference number: 4 (lower is better) Translates to: LPSAARHLPSSPSSLAKGRIFSA*WHFLST Trigger: TGTGCTCAAGAAGTGCCAGCAGGCAGAGAAAATTCT...TCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCACTGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | CAACTATGGGGGAGCAGCCGAGACAGTGACGGGGAGGCTAGGACTGGGCAGGGACTTCAGAATTTTCTCTaGCTGCTGGCACTTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: QLWGSSRDSDGEARTGQGLQNFL*LLALLE Trigger: CTCAAGAAGTGCCAGCAGGCAGAGAAAATTCTGAAG...TCCCTGCCCAGTCCTAGCCTCCCCGTCACTGTCTCGGCTGCTCCCCCATAGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR CCA 90 bp | TCTGCCCAGTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGCTTCATAGGTTCGTTTaGCTTCCTCAAACCGGTTTA | + |
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Preference number: 4 (lower is better) Translates to: SAQCCSPPSQLAFLIGEGLHRFV*LPQTGL Trigger: TAAACCGGTTTGAGGAAGCCAAACGAACCTATGAAG...CCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCACTGGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR GCA 90 bp | GTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGAAGAGGGGCTCAAAGTGCACAGCTaGTTGATTAGTTATGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: VLLATFPARLPHWRREEGLKVHS*LISYVG Trigger: ACCTACATAACTAATCAAGCAGCTGTGCACTTTGAG...CCCCTCTTCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR CCA 90 bp | CTGCCCAGTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGAATTAGGCAAGTTGAATaGATTCATGAATTTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LPSAARHLPSSPSSLAKGIRQVE*IHEFPL Trigger: GAGAGGAAATTCATGAATCCATTCAACTTGCCTAAT...TCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCACTGGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR CCA 90 bp | GTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGAAGAGGGGTCGTTTTCCAACTTTTaGTATAGATTAGGCAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: VLLATFPARLPHWRREEGSFSNF*YRLGKL Trigger: CAACTTGCCTAATCTATACCAAAAGTTGGAAAACGA...CCCCTCTTCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR CAA 90 bp | CTGCCCAGTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGAGGCTTGGGCTCCTTTTaGGGAGGAGGTGGGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: LPSAARHLPSSPSSLAKGGLGSF*GGGGGG Trigger: CCCACCCCCACCTCCTCCCAAAAAGGAGCCCAAGCC...TCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCACTGGGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR CAA 90 bp | GTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGAAGAGGGGGCACTCAGGGCCTTATaGCCCTTCTCCTTTAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: VLLATFPARLPHWRREEGALRAL*PFSFSS Trigger: TGAGCTAAAGGAGAAGGGCAATAAGGCCCTGAGTGC...CCCCTCTTCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR CAA 90 bp | GTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGAAGAGGGGGGGCTGCTGCTTTTCTaGAATAACCCTTGCCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: VLLATFPARLPHWRREEGGLLLF*NNPCPS Trigger: ACTGGGGCAAGGGTTATTCAAGAAAAGCAGCAGCCC...CCCCTCTTCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCAC 60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR CAA 90 bp | CTGCCCAGTGCTGCTCGCCACCTTCCCAGCTCGCCTTCCTCATTGGCGAAGGGAAAGCATTCGTTGCCCTaGTTCTTCTCCTCCAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: LPSAARHLPSSPSSLAKGKHSLP*FFSSKA Trigger: GGCTTTGGAGGAGAAGAACAAGGGCAACGAATGCTT...TCCCTTCGCCAATGAGGAAGGCGAGCTGGGAAGGTGGCGAGCAGCACTGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR CAA 90 bp | TATGGGGGAGCAGCCGAGACAGTGACGGGGAGGCTAGGACTGGGCAGGGAAGGAGGGCTATCATGTCTGTaGTACTGTGCCATCATACAG | + |
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Preference number: 5 (lower is better) Translates to: YGGAAETVTGRLGLGREGGLSCL*YCAIIQ Trigger: CTGTATGATGGCACAGTACAACAGACATGATAGCCC...TCCTTCCCTGCCCAGTCCTAGCCTCCCCGTCACTGTCTCGGCTGCTCCCCCATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS-3UTR CAA 90 bp | TATGGGGGAGCAGCCGAGACAGTGACGGGGAGGCTAGGACTGGGCAGGGAAGGAAAAGTGCACAGCTGCTaGATTAGTTATGTAGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: YGGAAETVTGRLGLGREGKVHSC*ISYVGH Trigger: ATGACCTACATAACTAATCAAGCAGCTGTGCACTTT...TCCTTCCCTGCCCAGTCCTAGCCTCCCCGTCACTGTCTCGGCTGCTCCCCCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS GCA 72 bp | TCCAGGATGAGTCTCATGGCTGGGTCACTCATTATCTaGTGCACCTCAGGGTCAGCCATGGCCCGCCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SRMSLMAGSLII*CTSGSAMARRF Trigger: GAAGCGGCGGGCCATGGCTGACCCTGAGGTGCAGCAGATAATGAGTGACCCAGCCATGAGACTCATCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS CCA 72 bp | GCTATTACAGGATTCTTTAAGTGTTCGCTCAGAGCCTaGGGGTCCTTTTGCATCTGCTCCAGGATGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: AITGFFKCSLRA*GSFCICSRMSL Trigger: GAGACTCATCCTGGAGCAGATGCAAAAGGACCCCCAGGCTCTGAGCGAACACTTAAAGAATCCTGTAATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS GCA 72 bp | GCATTTGTTATAGTCGCCCTTCTCAAAGTGCACAGCTaGTTGATTAGTTATGTAGGTCATGTTGGTAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: AFVIVALLKVHS*LISYVGHVGRV Trigger: GACCCTACCAACATGACCTACATAACTAATCAAGCAGCTGTGCACTTTGAGAAGGGCGACTATAACAAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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| CDS CCA 72 bp | TGGCTTCATGTTTTAAACCTTCTTCATAGGTTCGTTTaGCTTCCTCAAACCGGTTTAGGAATTCAAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: WLHVLNLLHRFV*LPQTGLGIQGL Trigger: CAGCCCTTGAATTCCTAAACCGGTTTGAGGAAGCCAAACGAACCTATGAAGAAGGTTTAAAACATGAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025918.9 |
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