Pregenerated sensors for STING1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024349Ensembl transcript IDs: ENSMUST00000115728.5, ENSMUST00000235218.2, ENSMUST00000235302.2, ENSMUST00000235495.2, ENSMUST00000237853.2, ENSMUST00000237919.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCTGTCCCATGCCTCAGATGAGGTCAGTGCGGAGTGGGAGAGGCTaGTCCATACCACTGATGAGGAGTCTTGGCTCTTGGGACAGTACG | + |
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Preference number: 1 (lower is better) Translates to: GCPMPQMRSVRSGRG*SIPLMRSLGSWDST Trigger: CGTACTGTCCCAAGAGCCAAGACTCCTCATCAGTGGTATGGATCAGCCTCTCCCACTCCGCACTGACCTCATCTGAGGCATGGGACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| 3UTR CCA 90 bp | GCCCAGACAAGGCTGTCCCATGCCTCAGATGAGGTCAGTGCGGAGTaGGAGAGGCTGATCCATACCACTGATGAGGAGTCTTGGCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: AQTRLSHASDEVSAE*ERLIHTTDEESWLL Trigger: CAAGAGCCAAGACTCCTCATCAGTGGTATGGATCAGCCTCTCCCACTCCGCACTGACCTCATCTGAGGCATGGGACAGCCTTGTCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| 3UTR TCA 90 bp | GAGGAGTCTTGGCTCTTGGGACAGTACGGAGGGAGGAGGTGCCACTaGGGTCATGGGGGCATTCATGGTAACCTCCTCCTTTTCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: EESWLLGQYGGRRCH*GHGGIHGNLLLFFL Trigger: CAGGAAGAAAAGGAGGAGGTTACCATGAATGCCCCCATGACCTCAGTGGCACCTCCTCCCTCCGTACTGTCCCAAGAGCCAAGACTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| 3UTR CCA 90 bp | CTACTTAAGCTCCCATTGAACACACGTGACCAGAAGCTGGAGGGTTaGAAGTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: LLKLPLNTRDQKLEG*KSAGTIHTGQQRAG Trigger: CCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGACTTCCAACCCTCCAGCTTCTGGTCACGTGTGTTCAATGGGAGCTTAAGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR GCA 90 bp | TCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTaGAGCATCCACGGGAAGTACTTGGCCTTTCTCTCAAGTTTACCA | + |
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Preference number: 1 (lower is better) Translates to: SAGTIHTGQQRAGNV*SIHGKYLAFLSSLP Trigger: TGGTAAACTTGAGAGAAAGGCCAAGTACTTCCCGTGGATGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR TCA 90 bp | GAACAAATGTTCCTTCTCCCTCTCGCCATCTACTTAAGCTCCCATTaGACACACGTGACCAGAAGCTGGAGGGTTGGAAGTCTGCTGGTA | + |
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Preference number: 1 (lower is better) Translates to: EQMFLLPLAIYLSSH*THVTRSWRVGSLLV Trigger: TACCAGCAGACTTCCAACCCTCCAGCTTCTGGTCACGTGTGTTCAATGGGAGCTTAAGTAGATGGCGAGAGGGAGAAGGAACATTTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR GCA 90 bp | CTATGTGATGTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTaGAAGGGACATGATATAAAGAGACCAGACAGAAAGTACTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: LCDVMSLGRPDANTM*KGHDIKRPDRKYSS Trigger: ACTGGAGTACTTTCTGTCTGGTCTCTTTATATCATGTCCCTTGCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGACATCACATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR TCA 90 bp | ACCACTGATGAGGAGTCTTGGCTCTTGGGACAGTACGGAGGGAGGAGGTGCCACTGCCGGAGCACCTCCTaGGACAGTGAGAAACTGTTT | + |
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Preference number: 2 (lower is better) Translates to: TTDEESWLLGQYGGRRCHCRSTS*DSEKLF Trigger: AAACAGTTTCTCACTGTCTCAGGAGGTGCTCCGGCA...GTGGCACCTCCTCCCTCCGTACTGTCCCAAGAGCCAAGACTCCTCATCAGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAAAGGATCACTAGAGCCCAGACAAGGCTGTCCCATGCCTCAGATGAGGTCATCCTCCTTTTCTTCCTaGCGAATGTGCCGGAGCACC | + |
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Preference number: 2 (lower is better) Translates to: AKGSLEPRQGCPMPQMRSSSFSS*RMCRST Trigger: GGTGCTCCGGCACATTCGTCAGGAAGAAAAGGAGGA...TGACCTCATCTGAGGCATGGGACAGCCTTGTCTGGGCTCTAGTGATCCTTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGGCTAAAGGATCACTAGAGCCCAGACAAGGCTGTCCCATGCCTCAGATGCACCTCCTGAGACAGTaGGAAACTGTTTCCGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: QEAKGSLEPRQGCPMPQMHLLRQ*ETVSVC Trigger: ACAGACGGAAACAGTTTCTCACTGTCTCAGGAGGTG...CATCTGAGGCATGGGACAGCCTTGTCTGGGCTCTAGTGATCCTTTAGCCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAAAGGATCACTAGAGCCCAGACAAGGCTGTCCCATGCCTCAGATGAGGTCAGTTCTTGGTAGACAATaGGGCGGCAGTTATTTCGAG | + |
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Preference number: 2 (lower is better) Translates to: AKGSLEPRQGCPMPQMRSVLGRQ*GGSYFE Trigger: CTCGAAATAACTGCCGCCTCATTGTCTACCAAGAAC...TGACCTCATCTGAGGCATGGGACAGCCTTGTCTGGGCTCTAGTGATCCTTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAAAGAGAAGCAGGGGAGAGAGACGTATGGAAGATGGAAGACGTATGGAATGGTGCCTGTTGTCTTaGCAACCGGTCTGCAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: SRKRSRGERRMEDGRRMEWCLLS*QPVCRL Trigger: CAACCTGCAGACCGGTTGCCAAGACAACAGGCACCA...TTCCATACGTCTTCCATCTTCCATACGTCTCTCTCCCCTGCTTCTCTTTCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR CAA 90 bp | AGAACAAATGTTCCTTCTCCCTCTCGCCATCTACTTAAGCTCCCATaGAACACACGTGACCAGAAGCTGGAGGGTTGGAAGTCTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RTNVPSPSRHLLKLP*NTRDQKLEGWKSAG Trigger: ACCAGCAGACTTCCAACCCTCCAGCTTCTGGTCACGTGTGTTCAATGGGAGCTTAAGTAGATGGCGAGAGGGAGAAGGAACATTTGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAAAGAGAAGCAGGGGAGAGAGACGTATGGAAGATGGAAGACGTATGGAAGACAGGCCAGCCCACTGTaGTTGTATACAGCTAACAGA | + |
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Preference number: 2 (lower is better) Translates to: QKEKQGRETYGRWKTYGRQASPL*LYTANR Trigger: TCTGTTAGCTGTATACAATCACAGTGGGCTGGCCTG...TCTTCCATACGTCTTCCATCTTCCATACGTCTCTCTCCCCTGCTTCTCTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCAATATATAAAATCCTTTaGCTGGGCAGGGAACGCATT | + |
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Preference number: 2 (lower is better) Translates to: SLLVPSTQVNREQGMSAAIYKIL*LGRERI Trigger: AATGCGTTCCCTGCCCAGCCAAAGGATTTTATATAT...TGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCATAAGTTTACCAGGCATTaGCACCAACTTCTACATATA | + |
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Preference number: 2 (lower is better) Translates to: VCWYHPHRSTESRECLQHKFTRH*HQLLHI Trigger: TATATGTAGAAGTTGGTGTCAATGCCTGGTAAACTT...ATGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTGCAAAGTTTACCAGGCATTaGCACCAACTTCTACATATA | + |
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Preference number: 2 (lower is better) Translates to: GSLLVPSTQVNREQGMSAKFTRH*HQLLHI Trigger: TATATGTAGAAGTTGGTGTCAATGCCTGGTAAACTT...TGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAAAGAGAAGCAGGGGAGAGAGACGTATGGAAGATGGAAGACGTATGGAATCCACGGGAAGTACTTaGCCTTTCTCTCAAGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: SRKRSRGERRMEDGRRMESTGST*PFSQVY Trigger: GTAAACTTGAGAGAAAGGCCAAGTACTTCCCGTGGA...TTCCATACGTCTTCCATCTTCCATACGTCTCTCTCCCCTGCTTCTCTTTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR CCA 90 bp | GATGACGTAACACAGGTAAAGGTGGGAGGTGAGCCAAGTGGAAGGTGGGAATATATATATAAAATCCTTTaGCTGGGCAGGGAACGCATT | + |
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Preference number: 2 (lower is better) Translates to: DDVTQVKVGGEPSGRWEYIYKIL*LGRERI Trigger: AATGCGTTCCCTGCCCAGCCAAAGGATTTTATATAT...ATATTCCCACCTTCCACTTGGCTCACCTCCCACCTTTACCTGTGTTACGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAGAGAAGCAGGGGAGAGAGACGTATGGAAGATGGAAGACGTATGGAAGAATATATAAAATCCTTTaGCTGGGCAGGGAACGCATT | + |
|
Preference number: 2 (lower is better) Translates to: QKEKQGRETYGRWKTYGRIYKIL*LGRERI Trigger: AATGCGTTCCCTGCCCAGCCAAAGGATTTTATATAT...TCTTCCATACGTCTTCCATCTTCCATACGTCTCTCTCCCCTGCTTCTCTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR CCA 72 bp | TGGGAGAGGCTGATCCATACCACTGATGAGGAGTCTTaGCTCTTGGGACAGTACGGAGGGAGGAGGTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: WERLIHTTDEES*LLGQYGGRRCH Trigger: GTGGCACCTCCTCCCTCCGTACTGTCCCAAGAGCCAAGACTCCTCATCAGTGGTATGGATCAGCCTCTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| 3UTR CCA 72 bp | AGGCTGTCCCATGCCTCAGATGAGGTCAGTGCGGAGTaGGAGAGGCTGATCCATACCACTGATGAGGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: RLSHASDEVSAE*ERLIHTTDEES Trigger: AGACTCCTCATCAGTGGTATGGATCAGCCTCTCCCACTCCGCACTGACCTCATCTGAGGCATGGGACAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| 3UTR TCA 72 bp | ATGCCTCAGATGAGGTCAGTGCGGAGTGGGAGAGGCTaGTCCATACCACTGATGAGGAGTCTTGGCTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: MPQMRSVRSGRG*SIPLMRSLGSW Trigger: CCAAGAGCCAAGACTCCTCATCAGTGGTATGGATCAGCCTCTCCCACTCCGCACTGACCTCATCTGAGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| 3UTR CCA 72 bp | CTCCCATTGAACACACGTGACCAGAAGCTGGAGGGTTaGAAGTCTGCTGGTACCATCCACACAGGTCAACAG | + |
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Preference number: 3 (lower is better) Translates to: LPLNTRDQKLEG*KSAGTIHTGQQ Trigger: CTGTTGACCTGTGTGGATGGTACCAGCAGACTTCCAACCCTCCAGCTTCTGGTCACGTGTGTTCAATGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR GCA 72 bp | ACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTaGAGCATCCACGGGAAGTACTTGGCCTTTCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: TIHTGQQRAGNV*SIHGKYLAFLS Trigger: TGAGAGAAAGGCCAAGTACTTCCCGTGGATGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR CAA 90 bp | GATGACGTAACACAGGTAAAGGTGGGAGGTGAGCCAAGTGGAAGGTGGGAATATCCAGAAGCTGGAGGGTaGGAAGTCTGCTGGTACCAT | + |
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Preference number: 3 (lower is better) Translates to: DDVTQVKVGGEPSGRWEYPEAGG*EVCWYH Trigger: ATGGTACCAGCAGACTTCCAACCCTCCAGCTTCTGG...ATATTCCCACCTTCCACTTGGCTCACCTCCCACCTTTACCTGTGTTACGTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR CAA 90 bp | GATGACGTAACACAGGTAAAGGTGGGAGGTGAGCCAAGTGGAAGGTGGGAATATGGTGAAATAAATGGCTaGCCCAGGAATGTGGGACTC | + |
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Preference number: 3 (lower is better) Translates to: DDVTQVKVGGEPSGRWEYGEING*PRNVGL Trigger: GAGTCCCACATTCCTGGGCAAGCCATTTATTTCACC...ATATTCCCACCTTCCACTTGGCTCACCTCCCACCTTTACCTGTGTTACGTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR CAA 90 bp | CACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCATCCACGGGAAGTACTTGGCCAAGTTTACCAGGCATaGACACCAACTTCTACATAT | + |
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Preference number: 3 (lower is better) Translates to: HRSTESRECLQHPREVLGQVYQA*TPTSTY Trigger: ATATGTAGAAGTTGGTGTCAATGCCTGGTAAACTTG...GCCAAGTACTTCCCGTGGATGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGAAAGAGAAGCAGGGGAGAGAGACGTATGGAAGATGGAAGACGTATGGAATTATTAAGAAGGCAGTaGACAGGCCAGCCCACTGTG | + |
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Preference number: 3 (lower is better) Translates to: SRKRSRGERRMEDGRRMELLRRQ*TGQPTV Trigger: CACAGTGGGCTGGCCTGTCAACTGCCTTCTTAATAA...TTCCATACGTCTTCCATCTTCCATACGTCTCTCTCCCCTGCTTCTCTTTCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR CAA 90 bp | CACTGTGATTGTATACAGCTAACAGAACAAATGTTCCTTCTCCCTCTCGCCATCGGTGAAATAAATGGCTaGCCCAGGAATGTGGGACTC | + |
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Preference number: 3 (lower is better) Translates to: HCDCIQLTEQMFLLPLAIGEING*PRNVGL Trigger: GAGTCCCACATTCCTGGGCAAGCCATTTATTTCACC...GATGGCGAGAGGGAGAAGGAACATTTGTTCTGTTAGCTGTATACAATCACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR-3UTR CAA 90 bp | CGCCTATGTGATGTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTGCAAGCAAGTTTACCAGGCATaGACACCAACTTCTACATAT | + |
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Preference number: 3 (lower is better) Translates to: RLCDVMSLGRPDANTMCKQVYQA*TPTSTY Trigger: ATATGTAGAAGTTGGTGTCAATGCCTGGTAAACTTG...CTTGCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGACATCACATAGGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR GCA 72 bp | GTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTaGAAGGGACATGATATAAAGAGACCAGACAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: VMSLGRPDANTM*KGHDIKRPDRK Trigger: CTTTCTGTCTGGTCTCTTTATATCATGTCCCTTGCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR CCA 72 bp | GGCATTGACACCAACTTCTACATATATAAAATCCTTTaGCTGGGCAGGGAACGCATTATGACCTCCTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: GIDTNFYIYKIL*LGRERIMTSFH Trigger: ATGAAAGGAGGTCATAATGCGTTCCCTGCCCAGCCAAAGGATTTTATATATGTAGAAGTTGGTGTCAATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR GCA 90 bp | CCCAGACAAGGCTGTCCCATGCCTCAGATGAGGTCAGTGCGGAGTGGGAGAGGCATGGCAAACAGGGTCTaGAAGGGGGTGGCGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: PRQGCPMPQMRSVRSGRGMANRV*KGVAYS Trigger: GGAGTACGCCACCCCCTTGCAGACCCTGTTTGCCAT...GCCTCTCCCACTCCGCACTGACCTCATCTGAGGCATGGGACAGCCTTGTCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| CDS-3UTR TCA 90 bp | GCGGAGTGGGAGAGGCTGATCCATACCACTGATGAGGAGTCTTGGCTCTTGGGAGCCGATCCTCCCGACTaGAGCCAGCTTTGGCATCCT | + |
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Preference number: 4 (lower is better) Translates to: AEWERLIHTTDEESWLLGADPPD*SQLWHP Trigger: AGGATGCCAAAGCTGGCTTCAGTCGGGAGGATCGGC...TCCCAAGAGCCAAGACTCCTCATCAGTGGTATGGATCAGCCTCTCCCACTCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| CDS-3UTR CCA 90 bp | ACCACTGATGAGGAGTCTTGGCTCTTGGGACAGTACGGAGGGAGGAGGTGCCACGGGTCTGCAAGGGGGTaGCGTACTCCAGGATACAGA | + |
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Preference number: 4 (lower is better) Translates to: TTDEESWLLGQYGGRRCHGSARG*RTPGYR Trigger: TCTGTATCCTGGAGTACGCCACCCCCTTGCAGACCC...GTGGCACCTCCTCCCTCCGTACTGTCCCAAGAGCCAAGACTCCTCATCAGTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| CDS-3UTR CCA 90 bp | CACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCATCCACGGGAAGTACTTGGCCTCTGGGCCGTGGGATaGCTGGATGCAGGTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: HRSTESRECLQHPREVLGLWAVG*LDAGWS Trigger: ACTCCAACCTGCATCCAGCCATCCCACGGCCCAGAG...GCCAAGTACTTCCCGTGGATGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | GTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCATCTCTGGGCCGTGGGATaGCTGGATGCAGGTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: VCWYHPHRSTESRECLQHLWAVG*LDAGWS Trigger: ACTCCAACCTGCATCCAGCCATCCCACGGCCCAGAG...ATGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | AGTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCACTCTGGGCCGTGGGATaGCTGGATGCAGGTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SLLVPSTQVNREQGMSAALWAVG*LDAGWS Trigger: ACTCCAACCTGCATCCAGCCATCCCACGGCCCAGAG...TGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | CTCGGGGACATCTTCCAGGATTTCCTCAAGTGTCCGGCAGAAGAGTTTAGCCTGCTCTGGGCCGTGGGATaGCTGGATGCAGGTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LGDIFQDFLKCPAEEFSLLWAVG*LDAGWS Trigger: ACTCCAACCTGCATCCAGCCATCCCACGGCCCAGAG...CAGGCTAAACTCTTCTGCCGGACACTTGAGGAAATCCTGGAAGATGTCCCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| CDS-3UTR CCA 90 bp | CACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCATCCACGGGAAGTACTTGGCAGCTGCCCTGGTACCTaGACTGGACATGGCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: HRSTESRECLQHPREVLGSCPGT*TGHGTA Trigger: AGCTGTGCCATGTCCAGTCCAGGTACCAGGGCAGCT...GCCAAGTACTTCCCGTGGATGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115728.5 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | CAGGAGGCTAAAGGATCACTAGAGCCCAGACAAGGCTGTCCCATGCCTCAGATGAGCTGCCCTGGTACCTaGACTGGACATGGCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: QEAKGSLEPRQGCPMPQMSCPGT*TGHGTA Trigger: AGCTGTGCCATGTCCAGTCCAGGTACCAGGGCAGCT...CATCTGAGGCATGGGACAGCCTTGTCTGGGCTCTAGTGATCCTTTAGCCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| CDS-3UTR TCA 90 bp | TGTCGCCTATGTGATGTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTGCGCCGATCCTCCCGACTaGAGCCAGCTTTGGCATCCT | + |
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Preference number: 4 (lower is better) Translates to: CRLCDVMSLGRPDANTMCADPPD*SQLWHP Trigger: AGGATGCCAAAGCTGGCTTCAGTCGGGAGGATCGGC...GCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGACATCACATAGGCGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR GCA 90 bp | AGTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCAATGGCAAACAGGGTCTaGAAGGGGGTGGCGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLVPSTQVNREQGMSAAMANRV*KGVAYS Trigger: GGAGTACGCCACCCCCTTGCAGACCCTGTTTGCCAT...TGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | AGTCAGGAGGCTAAAGGATCACTAGAGCCCAGACAAGGCTGTCCCATGCCTCAGTGCAGAGACTTCCGCTaGAGTCAAGCTCTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQEAKGSLEPRQGCPMPQCRDFR*SQALKA Trigger: GGCCTTCAGAGCTTGACTCCAGCGGAAGTCTCTGCA...CTGAGGCATGGGACAGCCTTGTCTGGGCTCTAGTGATCCTTTAGCCTCCTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTTGAGGCTCAGAGAGGTGAAATAAATGGCTTGCCCAGGAATGTGGGACTCGCCGATCCTCCCGACTaGAGCCAGCTTTGGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVEAQRGEINGLPRNVGLADPPD*SQLWHP Trigger: AGGATGCCAAAGCTGGCTTCAGTCGGGAGGATCGGC...GAGTCCCACATTCCTGGGCAAGCCATTTATTTCACCTCTCTGAGCCTCAACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | ATGGCTTGCCCAGGAATGTGGGACTCATCTGGAGATGTGAAGTCTCTGAGGCCCTGCCGGAGCACCTCCTaGGACAGTGAGAAACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MACPGMWDSSGDVKSLRPCRSTS*DSEKLF Trigger: AAACAGTTTCTCACTGTCTCAGGAGGTGCTCCGGCA...GGGCCTCAGAGACTTCACATCTCCAGATGAGTCCCACATTCCTGGGCAAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | CGCCTATGTGATGTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTGCAAGCGGAGTGGGAGAGGCTaGTCCATACCACTGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLCDVMSLGRPDANTMCKRSGRG*SIPLMR Trigger: CCTCATCAGTGGTATGGATCAGCCTCTCCCACTCCG...CTTGCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGACATCACATAGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR GCA 90 bp | TGTCGCCTATGTGATGTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTGCATGGCAAACAGGGTCTaGAAGGGGGTGGCGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CRLCDVMSLGRPDANTMCMANRV*KGVAYS Trigger: GGAGTACGCCACCCCCTTGCAGACCCTGTTTGCCAT...GCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGACATCACATAGGCGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | AGTGCGGAGTGGGAGAGGCTGATCCATACCACTGATGAGGAGTCTTGGCTCTTGTGGCATCCTGTGACATaGCAAACAGGGTCTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAEWERLIHTTDEESWLLWHPVT*QTGSAR Trigger: CCTTGCAGACCCTGTTTGCCATGTCACAGGATGCCA...CAAGAGCCAAGACTCCTCATCAGTGGTATGGATCAGCCTCTCCCACTCCGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| CDS-3UTR TCA 90 bp | AGTCAGGAGGCTAAAGGATCACTAGAGCCCAGACAAGGCTGTCCCATGCCTCAGTGGCCACCAGAAAGATaGGGGCTACATATTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQEAKGSLEPRQGCPMPQWPPER*GLHIWS Trigger: GCTCCAAATATGTAGCCCTCATCTTTCTGGTGGCCA...CTGAGGCATGGGACAGCCTTGTCTGGGCTCTAGTGATCCTTTAGCCTCCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGAGAAGCAGGGGAGAGAGACGTATGGAAGATGGAAGACGTATGGAAGAGCCGATCCTCCCGACTaGAGCCAGCTTTGGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKEKQGRETYGRWKTYGRADPPD*SQLWHP Trigger: AGGATGCCAAAGCTGGCTTCAGTCGGGAGGATCGGC...TCTTCCATACGTCTTCCATCTTCCATACGTCTCTCTCCCCTGCTTCTCTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | TGTCGCCTATGTGATGTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTGCTCCTCCTTTTCTTCCTaGCGAATGTGCCGGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CRLCDVMSLGRPDANTMCSSFSS*RMCRST Trigger: GGTGCTCCGGCACATTCGTCAGGAAGAAAAGGAGGA...GCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGACATCACATAGGCGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | GTTGGAAGTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTTCCTCCTTTTCTTCCTaGCGAATGTGCCGGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VGSLLVPSTQVNREQGMSSSFSS*RMCRST Trigger: GGTGCTCCGGCACATTCGTCAGGAAGAAAAGGAGGA...AGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGACTTCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
||
| CDS-3UTR GCA 90 bp | TTGGTTGAGGCTCAGAGAGGTGAAATAAATGGCTTGCCCAGGAATGTGGGACTCATGGCAAACAGGGTCTaGAAGGGGGTGGCGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVEAQRGEINGLPRNVGLMANRV*KGVAYS Trigger: GGAGTACGCCACCCCCTTGCAGACCCTGTTTGCCAT...GAGTCCCACATTCCTGGGCAAGCCATTTATTTCACCTCTCTGAGCCTCAACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | TGTCGCCTATGTGATGTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTGCCCCTGGTACCTGGACTaGACATGGCACAGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CRLCDVMSLGRPDANTMCPWYLD*TWHSSS Trigger: TGAAGAGCTGTGCCATGTCCAGTCCAGGTACCAGGG...GCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGACATCACATAGGCGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115728.5 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | TGTGATGTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTGCAAGGGACATAGCTGCCCTGGTACCTaGACTGGACATGGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CDVMSLGRPDANTMCKGHSCPGT*TGHGTA Trigger: AGCTGTGCCATGTCCAGTCCAGGTACCAGGGCAGCT...ATGTCCCTTGCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGACATCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115728.5 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | TGTCGCCTATGTGATGTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTGCTGCAGAGACTTCCGCTaGAGTCAAGCTCTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CRLCDVMSLGRPDANTMCCRDFR*SQALKA Trigger: GGCCTTCAGAGCTTGACTCCAGCGGAAGTCTCTGCA...GCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGACATCACATAGGCGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
||
| CDS-3UTR CCA 90 bp | GATGACGTAACACAGGTAAAGGTGGGAGGTGAGCCAAGTGGAAGGTGGGAATATGGGTCTGCAAGGGGGTaGCGTACTCCAGGATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DDVTQVKVGGEPSGRWEYGSARG*RTPGYR Trigger: TCTGTATCCTGGAGTACGCCACCCCCTTGCAGACCC...ATATTCCCACCTTCCACTTGGCTCACCTCCCACCTTTACCTGTGTTACGTCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | TTGGTTGAGGCTCAGAGAGGTGAAATAAATGGCTTGCCCAGGAATGTGGGACTCGGGTCTGCAAGGGGGTaGCGTACTCCAGGATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVEAQRGEINGLPRNVGLGSARG*RTPGYR Trigger: TCTGTATCCTGGAGTACGCCACCCCCTTGCAGACCC...GAGTCCCACATTCCTGGGCAAGCCATTTATTTCACCTCTCTGAGCCTCAACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | ACACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCATCCACGGGAAGTACTTGGTGGCATCCTGTGACATaGCAAACAGGGTCTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQVNREQGMSAASTGSTWWHPVT*QTGSAR Trigger: CCTTGCAGACCCTGTTTGCCATGTCACAGGATGCCA...CCAAGTACTTCCCGTGGATGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | GTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCATCACCTCCTGAGACAGTaGGAAACTGTTTCCGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCWYHPHRSTESRECLQHHLLRQ*ETVSVC Trigger: ACAGACGGAAACAGTTTCTCACTGTCTCAGGAGGTG...ATGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | CGCCTATGTGATGTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTGCAAGTGCCGGAGCACCTCCTaGGACAGTGAGAAACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLCDVMSLGRPDANTMCKCRSTS*DSEKLF Trigger: AAACAGTTTCTCACTGTCTCAGGAGGTGCTCCGGCA...CTTGCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGACATCACATAGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR GCA 90 bp | TGTCGCCTATGTGATGTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTGCCAGAAGAGTTTAGCCTaGTCAAGCCGATCCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CRLCDVMSLGRPDANTMCQKSLA*SSRSSR Trigger: TCGGGAGGATCGGCTTGAGCAGGCTAAACTCTTCTG...GCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGACATCACATAGGCGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | GTTTCCGTCTGTGGGTTCTTGGTAGACAATGAGGCGGCAGTTATTTCGAGACTCCCCTGGTACCTGGACTaGACATGGCACAGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVCGFLVDNEAAVISRLPWYLD*TWHSSS Trigger: TGAAGAGCTGTGCCATGTCCAGTCCAGGTACCAGGG...GAGTCTCGAAATAACTGCCGCCTCATTGTCTACCAAGAACCCACAGACGGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| CDS-3UTR CCA 90 bp | TTGGTTGAGGCTCAGAGAGGTGAAATAAATGGCTTGCCCAGGAATGTGGGACTCTGCAGAGACTTCCGCTaGAGTCAAGCTCTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVEAQRGEINGLPRNVGLCRDFR*SQALKA Trigger: GGCCTTCAGAGCTTGACTCCAGCGGAAGTCTCTGCA...GAGTCCCACATTCCTGGGCAAGCCATTTATTTCACCTCTCTGAGCCTCAACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | CTCGGGGACATCTTCCAGGATTTCCTCAAGTGTCCGGCAGAAGAGTTTAGCCTGGACCAGGCCAGCCCGTaGGCAACATTTAACTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGDIFQDFLKCPAEEFSLDQASP*ATFNFF Trigger: AAAGAAGTTAAATGTTGCCCACGGGCTGGCCTGGTC...CAGGCTAAACTCTTCTGCCGGACACTTGAGGAAATCCTGGAAGATGTCCCCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| CDS-3UTR CCA 90 bp | AGTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCACGGTCGATGTTTTGCTaGGGCAGCATATCTCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLVPSTQVNREQGMSAARSMFC*GSISRN Trigger: ATTCCGAGATATGCTGCCCCAGCAAAACATCGACCG...TGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | GGAAGTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTGCACGGTCGATGTTTTGCTaGGGCAGCATATCTCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSLLVPSTQVNREQGMSARSMFC*GSISRN Trigger: ATTCCGAGATATGCTGCCCCAGCAAAACATCGACCG...TGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGACTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | TCCAGTGTCACACAAATACCAGTGCTAGAGACAAGGGGAAGAGGCCATTCTAGAGGGTCTGCAAGGGGGTaGCGTACTCCAGGATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVTQIPVLETRGRGHSRGSARG*RTPGYR Trigger: TCTGTATCCTGGAGTACGCCACCCCCTTGCAGACCC...TCTAGAATGGCCTCTTCCCCTTGTCTCTAGCACTGGTATTTGTGTGACACTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | AGTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCAGGCCAAACATCCAACTaGGGTATATGTCAGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLVPSTQVNREQGMSAAGQTSN*GICQQC Trigger: ACACTGCTGACATATACCTCAGTTGGATGTTTGGCC...TGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115728.5 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | ACACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCATCCACGGGAAGTACTTGGGTTCTTGGTAGACAATaGGGCGGCAGTTATTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQVNREQGMSAASTGSTWVLGRQ*GGSYFE Trigger: CTCGAAATAACTGCCGCCTCATTGTCTACCAAGAAC...CCAAGTACTTCCCGTGGATGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | GGAAGTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTGCACACCCCACAGTCCAATaGAAAGAGGATGTACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLLVPSTQVNREQGMSAHPTVQ*KEDVQS Trigger: AGACTGTACATCCTCTTTCCATTGGACTGTGGGGTG...TGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGACTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | GTTGGAAGTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTACTGATGAGGAGTCTTaGCTCTTGGGACAGTACGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGSLLVPSTQVNREQGMSTDEES*LLGQYG Trigger: TCCGTACTGTCCCAAGAGCCAAGACTCCTCATCAGT...AGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGACTTCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | TGTCGCCTATGTGATGTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTGCACTGATGAGGAGTCTTaGCTCTTGGGACAGTACGGA | + |
|
Preference number: 4 (lower is better) Translates to: CRLCDVMSLGRPDANTMCTDEES*LLGQYG Trigger: TCCGTACTGTCCCAAGAGCCAAGACTCCTCATCAGT...GCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGACATCACATAGGCGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | ACACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCATCCACGGGAAGTACTTGGAACATCCAACTGGACTaGACATGGCACAGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQVNREQGMSAASTGSTWNIQLD*TWHSSS Trigger: TGAAGAGCTGTGCCATGTCCAGTCCAGTTGGATGTT...CCAAGTACTTCCCGTGGATGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235495.2 |
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| CDS-3UTR TCA 90 bp | GTAGGGTTGGTTGAGGCTCAGAGAGGTGAAATAAATGGCTTGCCCAGGAATGTGTGGCCACCAGAAAGATaGGGGCTACATATTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGLVEAQRGEINGLPRNVWPPER*GLHIWS Trigger: GCTCCAAATATGTAGCCCTCATCTTTCTGGTGGCCA...CACATTCCTGGGCAAGCCATTTATTTCACCTCTCTGAGCCTCAACCAACCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | GATGACGTAACACAGGTAAAGGTGGGAGGTGAGCCAAGTGGAAGGTGGGAATATTGGCCACCAGAAAGATaGGGGCTACATATTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DDVTQVKVGGEPSGRWEYWPPER*GLHIWS Trigger: GCTCCAAATATGTAGCCCTCATCTTTCTGGTGGCCA...ATATTCCCACCTTCCACTTGGCTCACCTCCCACCTTTACCTGTGTTACGTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGGTTGGTTGAGGCTCAGAGAGGTGAAATAAATGGCTTGCCCAGGAATGTGCACCTCCTGAGACAGTaGGAAACTGTTTCCGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGLVEAQRGEINGLPRNVHLLRQ*ETVSVC Trigger: ACAGACGGAAACAGTTTCTCACTGTCTCAGGAGGTG...CACATTCCTGGGCAAGCCATTTATTTCACCTCTCTGAGCCTCAACCAACCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | AGCAGAAAGAGAAGCAGGGGAGAGAGACGTATGGAAGATGGAAGACGTATGGAATGCCGGAGCACCTCCTaGGACAGTGAGAAACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRKRSRGERRMEDGRRMECRSTS*DSEKLF Trigger: AAACAGTTTCTCACTGTCTCAGGAGGTGCTCCGGCA...TTCCATACGTCTTCCATCTTCCATACGTCTCTCTCCCCTGCTTCTCTTTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTGATTGTATACAGCTAACAGAACAAATGTTCCTTCTCCCTCTCGCCATCCGGAGTGGGAGAGGCTaGTCCATACCACTGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HCDCIQLTEQMFLLPLAIRSGRG*SIPLMR Trigger: CCTCATCAGTGGTATGGATCAGCCTCTCCCACTCCG...GATGGCGAGAGGGAGAAGGAACATTTGTTCTGTTAGCTGTATACAATCACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGGTTGGTTGAGGCTCAGAGAGGTGAAATAAATGGCTTGCCCAGGAATGTGGACCAGGCCAGCCCGTaGGCAACATTTAACTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGLVEAQRGEINGLPRNVDQASP*ATFNFF Trigger: AAAGAAGTTAAATGTTGCCCACGGGCTGGCCTGGTC...CACATTCCTGGGCAAGCCATTTATTTCACCTCTCTGAGCCTCAACCAACCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
||
| CDS-3UTR CCA 90 bp | GATGACGTAACACAGGTAAAGGTGGGAGGTGAGCCAAGTGGAAGGTGGGAATATGACCAGGCCAGCCCGTaGGCAACATTTAACTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DDVTQVKVGGEPSGRWEYDQASP*ATFNFF Trigger: AAAGAAGTTAAATGTTGCCCACGGGCTGGCCTGGTC...ATATTCCCACCTTCCACTTGGCTCACCTCCCACCTTTACCTGTGTTACGTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTGGTTGAGGCTCAGAGAGGTGAAATAAATGGCTTGCCCAGGAATGTGGGACACCCCACAGTCCAATaGAAAGAGGATGTACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVEAQRGEINGLPRNVGHPTVQ*KEDVQS Trigger: AGACTGTACATCCTCTTTCCATTGGACTGTGGGGTG...TCCCACATTCCTGGGCAAGCCATTTATTTCACCTCTCTGAGCCTCAACCAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
||
| CDS-3UTR CCA 90 bp | CGCCTATGTGATGTCATGAGTTTGGGACGTCCTGATGCCAACACCATGTGCAAGCACCCCACAGTCCAATaGAAAGAGGATGTACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLCDVMSLGRPDANTMCKHPTVQ*KEDVQS Trigger: AGACTGTACATCCTCTTTCCATTGGACTGTGGGGTG...CTTGCACATGGTGTTGGCATCAGGACGTCCCAAACTCATGACATCACATAGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAAAGAGAAGCAGGGGAGAGAGACGTATGGAAGATGGAAGACGTATGGAATGGCATCCTGTGACATaGCAAACAGGGTCTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKRSRGERRMEDGRRMEWHPVT*QTGSAR Trigger: CCTTGCAGACCCTGTTTGCCATGTCACAGGATGCCA...TTCCATACGTCTTCCATCTTCCATACGTCTCTCTCCCCTGCTTCTCTTTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR CAA 72 bp | GGGTTGGTTGAGGCTCAGAGAGGTGAAATAAATGGCTaGCCCAGGAATGTGGGACTCATCTGGAGATGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLVEAQRGEING*PRNVGLIWRCE Trigger: TTCACATCTCCAGATGAGTCCCACATTCCTGGGCAAGCCATTTATTTCACCTCTCTGAGCCTCAACCAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | TTGGTTGAGGCTCAGAGAGGTGAAATAAATGGCTTGCCCAGGAATGTGGGACTCGTTCTTGGTAGACAATaGGGCGGCAGTTATTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVEAQRGEINGLPRNVGLVLGRQ*GGSYFE Trigger: CTCGAAATAACTGCCGCCTCATTGTCTACCAAGAAC...GAGTCCCACATTCCTGGGCAAGCCATTTATTTCACCTCTCTGAGCCTCAACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | CAGAAAGAGAAGCAGGGGAGAGAGACGTATGGAAGATGGAAGACGTATGGAAGAACTGATGAGGAGTCTTaGCTCTTGGGACAGTACGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKEKQGRETYGRWKTYGRTDEES*LLGQYG Trigger: TCCGTACTGTCCCAAGAGCCAAGACTCCTCATCAGT...TCTTCCATACGTCTTCCATCTTCCATACGTCTCTCTCCCCTGCTTCTCTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | TCCAGTGTCACACAAATACCAGTGCTAGAGACAAGGGGAAGAGGCCATTCTAGAGTTCTTGGTAGACAATaGGGCGGCAGTTATTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVTQIPVLETRGRGHSRVLGRQ*GGSYFE Trigger: CTCGAAATAACTGCCGCCTCATTGTCTACCAAGAAC...TCTAGAATGGCCTCTTCCCCTTGTCTCTAGCACTGGTATTTGTGTGACACTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | TCCAGTGTCACACAAATACCAGTGCTAGAGACAAGGGGAAGAGGCCATTCTAGACAGAGTGTGATTTGGTaGATCCTTTGCCACCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVTQIPVLETRGRGHSRQSVIW*ILCHPK Trigger: CTTTGGGTGGCAAAGGATCCACCAAATCACACTCTG...TCTAGAATGGCCTCTTCCCCTTGTCTCTAGCACTGGTATTTGTGTGACACTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | AACTTCTACATATATAAAATCCTTTGGCTGGGCAGGGAACGCATTATGACCTCCTGCAGAGACTTCCGCTaGAGTCAAGCTCTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NFYIYKILWLGRERIMTSCRDFR*SQALKA Trigger: GGCCTTCAGAGCTTGACTCCAGCGGAAGTCTCTGCA...GGAGGTCATAATGCGTTCCCTGCCCAGCCAAAGGATTTTATATATGTAGAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | GATTGTATACAGCTAACAGAACAAATGTTCCTTCTCCCTCTCGCCATCTACTTATCCTCCTTTTCTTCCTaGCGAATGTGCCGGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DCIQLTEQMFLLPLAIYLSSFSS*RMCRST Trigger: GGTGCTCCGGCACATTCGTCAGGAAGAAAAGGAGGA...TAAGTAGATGGCGAGAGGGAGAAGGAACATTTGTTCTGTTAGCTGTATACAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | CAAGTTTACCAGGCATTGACACCAACTTCTACATATATAAAATCCTTTGGCTGGCGGAGTGGGAGAGGCTaGTCCATACCACTGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVYQALTPTSTYIKSFGWRSGRG*SIPLMR Trigger: CCTCATCAGTGGTATGGATCAGCCTCTCCCACTCCG...CCAGCCAAAGGATTTTATATATGTAGAAGTTGGTGTCAATGCCTGGTAAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | CACTGTGATTGTATACAGCTAACAGAACAAATGTTCCTTCTCCCTCTCGCCATCGACCAGGCCAGCCCGTaGGCAACATTTAACTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HCDCIQLTEQMFLLPLAIDQASP*ATFNFF Trigger: AAAGAAGTTAAATGTTGCCCACGGGCTGGCCTGGTC...GATGGCGAGAGGGAGAAGGAACATTTGTTCTGTTAGCTGTATACAATCACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | GATTGTATACAGCTAACAGAACAAATGTTCCTTCTCCCTCTCGCCATCTACTTAATTCGGATCCGGGCCTaGAGCCCTGGTAAGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DCIQLTEQMFLLPLAIYLIRIRA*SPGKIN Trigger: GTTGATCTTACCAGGGCTCCAGGCCCGGATCCGAAT...TAAGTAGATGGCGAGAGGGAGAAGGAACATTTGTTCTGTTAGCTGTATACAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR TCA 90 bp | AACTTCTACATATATAAAATCCTTTGGCTGGGCAGGGAACGCATTATGACCTCCTGGCCACCAGAAAGATaGGGGCTACATATTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NFYIYKILWLGRERIMTSWPPER*GLHIWS Trigger: GCTCCAAATATGTAGCCCTCATCTTTCTGGTGGCCA...GGAGGTCATAATGCGTTCCCTGCCCAGCCAAAGGATTTTATATATGTAGAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | CAAGTTTACCAGGCATTGACACCAACTTCTACATATATAAAATCCTTTGGCTGGATTCGGATCCGGGCCTaGAGCCCTGGTAAGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVYQALTPTSTYIKSFGWIRIRA*SPGKIN Trigger: GTTGATCTTACCAGGGCTCCAGGCCCGGATCCGAAT...CCAGCCAAAGGATTTTATATATGTAGAAGTTGGTGTCAATGCCTGGTAAACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | CAAGTTTACCAGGCATTGACACCAACTTCTACATATATAAAATCCTTTGGCTGGTGGCATCCTGTGACATaGCAAACAGGGTCTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVYQALTPTSTYIKSFGWWHPVT*QTGSAR Trigger: CCTTGCAGACCCTGTTTGCCATGTCACAGGATGCCA...CCAGCCAAAGGATTTTATATATGTAGAAGTTGGTGTCAATGCCTGGTAAACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CCA 90 bp | CAAGTTTACCAGGCATTGACACCAACTTCTACATATATAAAATCCTTTGGCTGGGGCCAAACATCCAACTaGACTGGACATGGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVYQALTPTSTYIKSFGWGQTSN*TGHGTA Trigger: AGCTGTGCCATGTCCAGTCCAGTTGGATGTTTGGCC...CCAGCCAAAGGATTTTATATATGTAGAAGTTGGTGTCAATGCCTGGTAAACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235495.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTTTACCAGGCATTGACACCAACTTCTACATATATAAAATCCTTTGGCTGGCACCTCCTGAGACAGTaGGAAACTGTTTCCGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVYQALTPTSTYIKSFGWHLLRQ*ETVSVC Trigger: ACAGACGGAAACAGTTTCTCACTGTCTCAGGAGGTG...CCAGCCAAAGGATTTTATATATGTAGAAGTTGGTGTCAATGCCTGGTAAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| 3UTR CAA 72 bp | GGAAGTACTTGGCCTTTCTCTCAAGTTTACCAGGCATaGACACCAACTTCTACATATATAAAATCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSTWPFSQVYQA*TPTSTYIKSFG Trigger: GCCAAAGGATTTTATATATGTAGAAGTTGGTGTCAATGCCTGGTAAACTTGAGAGAAAGGCCAAGTACTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS GCA 90 bp | AGTGGATGGGGCATCCCAGGCAGGCGCGCACAGCCTTCCAGTAGCTaGCCTGGTACCTGGACTGGACATGGCACAGCTCTTCAGCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGWGIPGRRAQPSSS*PGTWTGHGTALQPD Trigger: GTCTGGCTGAAGAGCTGTGCCATGTCCAGTCCAGGTACCAGGGCAGCTACTGGAAGGCTGTGCGCGCCTGCCTGGGATGCCCCATCCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115728.5 ENSMUST00000235302.2 ENSMUST00000237853.2 ENSMUST00000237919.2 |
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| CDS TCA 90 bp | CTGCTCAAGCCGATCCTCCCGACTGAAGCCAGCTTTGGCATCCTGTaGCATGGCAAACAGGGTCTGCAAGGGGGTGGCGTACTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLKPILPTEASFGIL*HGKQGLQGGGVLQD Trigger: ATCCTGGAGTACGCCACCCCCTTGCAGACCCTGTTTGCCATGTCACAGGATGCCAAAGCTGGCTTCAGTCGGGAGGATCGGCTTGAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS GCA 90 bp | CGACTGAAGCCAGCTTTGGCATCCTGTGACATGGCAAACAGGGTCTaGAAGGGGGTGGCGTACTCCAGGATACAGACGCCTGCTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLKPALASCDMANRV*KGVAYSRIQTPAGC Trigger: ACAGCCAGCAGGCGTCTGTATCCTGGAGTACGCCACCCCCTTGCAGACCCTGTTTGCCATGTCACAGGATGCCAAAGCTGGCTTCAGTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS CCA 90 bp | CAGCTTTGGCATCCTGTGACATGGCAAACAGGGTCTGCAAGGGGGTaGCGTACTCCAGGATACAGACGCCTGCTGGCTGTCCGTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLWHPVTWQTGSARG*RTPGYRRLLAVRSP Trigger: TGGAGAACGGACAGCCAGCAGGCGTCTGTATCCTGGAGTACGCCACCCCCTTGCAGACCCTGTTTGCCATGTCACAGGATGCCAAAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS CCA 90 bp | CAGCTTTGGCATCCTGTGACATGGCAAACAGGGTCTGCAAGGGGGTaGCGTACTCCAGGATACAGACGCCTGCCTGGTAAGATCAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: QLWHPVTWQTGSARG*RTPGYRRLPGKINR Trigger: GCGGTTGATCTTACCAGGCAGGCGTCTGTATCCTGGAGTACGCCACCCCCTTGCAGACCCTGTTTGCCATGTCACAGGATGCCAAAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| CDS GCA 90 bp | ACATCTTCCAGGATTTCCTCAAGTGTCCGGCAGAAGAGTTTAGCCTaGTCAAGCCGATCCTCCCGACTGAAGCCAGCTTTGGCATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSSRISSSVRQKSLA*SSRSSRLKPALASG Trigger: GCCAGATGCCAAAGCTGGCTTCAGTCGGGAGGATCGGCTTGAGCAGGCTAAACTCTTCTGCCGGACACTTGAGGAAATCCTGGAAGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235218.2 |
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| CDS GCA 90 bp | CTGCAGAGACTTCCGCTGGAGTCAAGCTCTGAAGGCCCAGGAGCATaGTTAGGGACTTATAGAGGACCAGAAGGCCAAACATCCAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQRLPLESSSEGPGA*LGTYRGPEGQTSNW Trigger: CCAGTTGGATGTTTGGCCTTCTGGTCCTCTATAAGTCCCTAAGCATGCTCCTGGGCCTTCAGAGCTTGACTCCAGCGGAAGTCTCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235495.2 |
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| CDS GCA 90 bp | AAACAGGGTCTGCAAGGGGGTGGCGTACTCCAGGATACAGACGCCTaGCTGGTAAGATCAACCGCAAGTACCCAATGTAGTATGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KQGLQGGGVLQDTDA*LVRSTASTQCSMTR Trigger: CCTGGTCATACTACATTGGGTACTTGCGGTTGATCTTACCAGGCAGGCGTCTGTATCCTGGAGTACGCCACCCCCTTGCAGACCCTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| CDS CCA 90 bp | GTTGGGGTCAACTACACTCAGGTTGTCAGGCACCCCACAGTCCAATaGAAAGAGGATGTACAGTCTTCGGCTCCCTGCACCACTGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VGVNYTQVVRHPTVQ*KEDVQSSAPCTTEH Trigger: ATGCTCAGTGGTGCAGGGAGCCGAAGACTGTACATCCTCTTTCCATTGGACTGTGGGGTGCCTGACAACCTGAGTGTAGTTGACCCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS GCA 90 bp | ACATCTTCCAGGATTTCCTCAAGTGTCCGGCAGAAGAGTTTAGCCTaGTCAAGCCGATCCTCCCGACTGAAGCCAGCTTTGGCATCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSSRISSSVRQKSLA*SSRSSRLKPALASC Trigger: ACAGGATGCCAAAGCTGGCTTCAGTCGGGAGGATCGGCTTGAGCAGGCTAAACTCTTCTGCCGGACACTTGAGGAAATCCTGGAAGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS TCA 90 bp | TACAGTCTTCGGCTCCCTGCACCACTGAGCATGTTGTTATGTAGCTaGTTGAACATTCGGATCCGGGCCTGGAGCCCTGGTAAGATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: YSLRLPAPLSMLLCS*LNIRIRAWSPGKIN Trigger: GTTGATCTTACCAGGGCTCCAGGCCCGGATCCGAATGTTCAATCAGCTACATAACAACATGCTCAGTGGTGCAGGGAGCCGAAGACTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CAA 90 bp | CACAGGTCAACAGAGAGCAGGGAATGTCTGCAGCATCCACGGGAAGTACTTGGCGATTTGGTGGATCCTTaGCCACCCAAAGGATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HRSTESRECLQHPREVLGDLVDP*PPKGSS Trigger: TGATGATCCTTTGGGTGGCAAAGGATCCACCAAATC...GCCAAGTACTTCCCGTGGATGCTGCAGACATTCCCTGCTCTCTGTTGACCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CAA 90 bp | ATGGCTTGCCCAGGAATGTGGGACTCATCTGGAGATGTGAAGTCTCTGAGGCCCGATTTGGTGGATCCTTaGCCACCCAAAGGATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: MACPGMWDSSGDVKSLRPDLVDP*PPKGSS Trigger: TGATGATCCTTTGGGTGGCAAAGGATCCACCAAATC...GGGCCTCAGAGACTTCACATCTCCAGATGAGTCCCACATTCCTGGGCAAGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CAA 90 bp | GGAAGTCTGCTGGTACCATCCACACAGGTCAACAGAGAGCAGGGAATGTCTGCAACTTCAGAGTGTGATTaGGTGGATCCTTTGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: GSLLVPSTQVNREQGMSATSECD*VDPLPP Trigger: GGGTGGCAAAGGATCCACCAAATCACACTCTGAAGT...TGCAGACATTCCCTGCTCTCTGTTGACCTGTGTGGATGGTACCAGCAGACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS TCA 90 bp | CGTTCTCCAGAATCTCGTAGACGCTGTTGGAATAAACCCGATTCTTaGTGCCAGCACGGTCGATGTTTTGCTGGGGCAGCATATCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSPESRRRCWNKPDS*CQHGRCFAGAAYLG Trigger: TCCGAGATATGCTGCCCCAGCAAAACATCGACCGTGCTGGCATCAAGAATCGGGTTTATTCCAACAGCGTCTACGAGATTCTGGAGAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS-3UTR CAA 90 bp | GGGTTCTTGGTAGACAATGAGGCGGCAGTTATTTCGAGACTCGGGGACATCTTCGATTTGGTGGATCCTTaGCCACCCAAAGGATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GFLVDNEAAVISRLGDIFDLVDP*PPKGSS Trigger: TGATGATCCTTTGGGTGGCAAAGGATCCACCAAATC...GAAGATGTCCCCGAGTCTCGAAATAACTGCCGCCTCATTGTCTACCAAGAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| CDS-3UTR CAA 90 bp | GATGACGTAACACAGGTAAAGGTGGGAGGTGAGCCAAGTGGAAGGTGGGAATATGATTTGGTGGATCCTTaGCCACCCAAAGGATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: DDVTQVKVGGEPSGRWEYDLVDP*PPKGSS Trigger: TGATGATCCTTTGGGTGGCAAAGGATCCACCAAATC...ATATTCCCACCTTCCACTTGGCTCACCTCCCACCTTTACCTGTGTTACGTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS TCA 72 bp | CCGATCCTCCCGACTGAAGCCAGCTTTGGCATCCTGTaGCATGGCAAACAGGGTCTGCAAGGGGGTGGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: PILPTEASFGIL*HGKQGLQGGGV Trigger: TACGCCACCCCCTTGCAGACCCTGTTTGCCATGTCACAGGATGCCAAAGCTGGCTTCAGTCGGGAGGATCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237853.2 ENSMUST00000237919.2 |
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| CDS CCA 72 bp | CATCCTGTGACATGGCAAACAGGGTCTGCAAGGGGGTaGCGTACTCCAGGATACAGACGCCTGCTGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HPVTWQTGSARG*RTPGYRRLLAV Trigger: GACAGCCAGCAGGCGTCTGTATCCTGGAGTACGCCACCCCCTTGCAGACCCTGTTTGCCATGTCACAGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS CAA 90 bp | AAGAGTTTAGCCTGCTCAAGCCGATCCTCCCGACTGAAGCCAGCTTaGGCATCCTGTGACATGGCAAACAGGGTCTGCAAGGGGGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: KSLACSSRSSRLKPA*ASCDMANRVCKGVA Trigger: CGCCACCCCCTTGCAGACCCTGTTTGCCATGTCACAGGATGCCAAAGCTGGCTTCAGTCGGGAGGATCGGCTTGAGCAGGCTAAACTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS GCA 72 bp | CCAGCTTTGGCATCCTGTGACATGGCAAACAGGGTCTaGAAGGGGGTGGCGTACTCCAGGATACAGACGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PALASCDMANRV*KGVAYSRIQTP Trigger: AGGCGTCTGTATCCTGGAGTACGCCACCCCCTTGCAGACCCTGTTTGCCATGTCACAGGATGCCAAAGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237853.2 ENSMUST00000237919.2 |
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| CDS CCA 72 bp | CATCCTGTGACATGGCAAACAGGGTCTGCAAGGGGGTaGCGTACTCCAGGATACAGACGCCTGCCTGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: HPVTWQTGSARG*RTPGYRRLPGK Trigger: CTTACCAGGCAGGCGTCTGTATCCTGGAGTACGCCACCCCCTTGCAGACCCTGTTTGCCATGTCACAGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| CDS CAA 72 bp | GCCTGCTCAAGCCGATCCTCCCGACTGAAGCCAGCTTaGGCATCCTGTGACATGGCAAACAGGGTCTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ACSSRSSRLKPA*ASCDMANRVCK Trigger: CTTGCAGACCCTGTTTGCCATGTCACAGGATGCCAAAGCTGGCTTCAGTCGGGAGGATCGGCTTGAGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS TCA 72 bp | CGGCTCCCTGCACCACTGAGCATGTTGTTATGTAGCTaGTTGAACATTCGGATCCGGGCCTGGAGCCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RLPAPLSMLLCS*LNIRIRAWSPG Trigger: ACCAGGGCTCCAGGCCCGGATCCGAATGTTCAATCAGCTACATAACAACATGCTCAGTGGTGCAGGGAGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS GCA 72 bp | CTGCAAGGGGGTGGCGTACTCCAGGATACAGACGCCTaGCTGGTAAGATCAACCGCAAGTACCCAATGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LQGGGVLQDTDA*LVRSTASTQCS Trigger: ACTACATTGGGTACTTGCGGTTGATCTTACCAGGCAGGCGTCTGTATCCTGGAGTACGCCACCCCCTTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237853.2 |
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| CDS CCA 72 bp | AAGCCGATCCTCCCGACTGAAGCCAGCTTTGGCATCTaGCTGTCCGTTCTCCAGAATCTCGTAGACGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: KPILPTEASFGI*LSVLQNLVDAV Trigger: AACAGCGTCTACGAGATTCTGGAGAACGGACAGCCAGATGCCAAAGCTGGCTTCAGTCGGGAGGATCGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235218.2 |
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| CDS GCA 72 bp | CTTCCGCTGGAGTCAAGCTCTGAAGGCCCAGGAGCATaGTTAGGGACTTATAGAGGACCAGAAGGCCAAACA | + |
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Preference number: 6 (lower is better) Translates to: LPLESSSEGPGA*LGTYRGPEGQT Trigger: TGTTTGGCCTTCTGGTCCTCTATAAGTCCCTAAGCATGCTCCTGGGCCTTCAGAGCTTGACTCCAGCGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237853.2 ENSMUST00000237919.2 |
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| CDS GCA 72 bp | AGGATTTCCTCAAGTGTCCGGCAGAAGAGTTTAGCCTaGTCAAGCCGATCCTCCCGACTGAAGCCAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: RISSSVRQKSLA*SSRSSRLKPAL Trigger: CAAAGCTGGCTTCAGTCGGGAGGATCGGCTTGAGCAGGCTAAACTCTTCTGCCGGACACTTGAGGAAATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115728.5 ENSMUST00000235218.2 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS CCA 72 bp | AACTACACTCAGGTTGTCAGGCACCCCACAGTCCAATaGAAAGAGGATGTACAGTCTTCGGCTCCCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: NYTQVVRHPTVQ*KEDVQSSAPCT Trigger: GGTGCAGGGAGCCGAAGACTGTACATCCTCTTTCCATTGGACTGTGGGGTGCCTGACAACCTGAGTGTAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS CAA 90 bp | GTTCGTGCGAGGCTAGGTGAAGTGCTAGGTACTTCAGAGTGTGATTaGGTGGATCCTTTGCCACCCAAAGGATCATCAGGCTGGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: VRARLGEVLGTSECD*VDPLPPKGSSGWPP Trigger: TGGTGGCCAGCCTGATGATCCTTTGGGTGGCAAAGGATCCACCAAATCACACTCTGAAGTACCTAGCACTTCACCTAGCCTCGCACGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115728.5 ENSMUST00000235302.2 ENSMUST00000235495.2 ENSMUST00000237853.2 ENSMUST00000237919.2 |
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| CDS CCA 72 bp | ACCCGATTCTTGATGCCAGCACGGTCGATGTTTTGCTaGGGCAGCATATCTCGGAATCGAATGTTGGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: TRFLMPARSMFC*GSISRNRMLGS Trigger: TGACCCCAACATTCGATTCCGAGATATGCTGCCCCAGCAAAACATCGACCGTGCTGGCATCAAGAATCGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS TCA 72 bp | GAATCTCGTAGACGCTGTTGGAATAAACCCGATTCTTaGTGCCAGCACGGTCGATGTTTTGCTGGGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: ESRRRCWNKPDS*CQHGRCFAGAA Trigger: TGCTGCCCCAGCAAAACATCGACCGTGCTGGCATCAAGAATCGGGTTTATTCCAACAGCGTCTACGAGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS CAA 72 bp | GTGCTAGGTACTTCAGAGTGTGATTTGGTGGATCCTTaGCCACCCAAAGGATCATCAGGCTGGCCACCAGAA | + |
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Preference number: 6 (lower is better) Translates to: VLGTSECDLVDP*PPKGSSGWPPE Trigger: TTCTGGTGGCCAGCCTGATGATCCTTTGGGTGGCAAAGGATCCACCAAATCACACTCTGAAGTACCTAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115728.5 ENSMUST00000235302.2 ENSMUST00000235495.2 ENSMUST00000237853.2 ENSMUST00000237919.2 |
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| CDS CAA 90 bp | GGCAGCATATCTCGGAATCGAATGTTGGGGTCAACTACACTCAGGTaGTCAGGCACCCCACAGTCCAATGGAAAGAGGATGTACAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: GSISRNRMLGSTTLR*SGTPQSNGKRMYSL Trigger: AAGACTGTACATCCTCTTTCCATTGGACTGTGGGGTGCCTGACAACCTGAGTGTAGTTGACCCCAACATTCGATTCCGAGATATGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS CAA 90 bp | GCTGTTGGAATAAACCCGATTCTTGATGCCAGCACGGTCGATGTTTaGCTGGGGCAGCATATCTCGGAATCGAATGTTGGGGTCAACTAC | + |
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Preference number: 6 (lower is better) Translates to: AVGINPILDASTVDV*LGQHISESNVGVNY Trigger: GTAGTTGACCCCAACATTCGATTCCGAGATATGCTGCCCCAGCAAAACATCGACCGTGCTGGCATCAAGAATCGGGTTTATTCCAACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS CAA 72 bp | AGGCTAGGTGAAGTGCTAGGTACTTCAGAGTGTGATTaGGTGGATCCTTTGCCACCCAAAGGATCATCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RLGEVLGTSECD*VDPLPPKGSSG Trigger: GCCTGATGATCCTTTGGGTGGCAAAGGATCCACCAAATCACACTCTGAAGTACCTAGCACTTCACCTAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000115728.5 ENSMUST00000235302.2 ENSMUST00000235495.2 ENSMUST00000237853.2 ENSMUST00000237919.2 |
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| CDS CAA 72 bp | ATAAACCCGATTCTTGATGCCAGCACGGTCGATGTTTaGCTGGGGCAGCATATCTCGGAATCGAATGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: INPILDASTVDV*LGQHISESNVG Trigger: CCCAACATTCGATTCCGAGATATGCTGCCCCAGCAAAACATCGACCGTGCTGGCATCAAGAATCGGGTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000235495.2 ENSMUST00000237919.2 |
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| CDS TCA 72 bp | GGGACTTATAGAGGACCAGAAGGCCAAACATCCAACTaGGGTATATGTCAGCAGTGTTTTGGAGGAAATAGA | + |
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Preference number: 6 (lower is better) Translates to: GTYRGPEGQTSN*GICQQCFGGNR Trigger: TCTATTTCCTCCAAAACACTGCTGACATATACCTCAGTTGGATGTTTGGCCTTCTGGTCCTCTATAAGTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115728.5 ENSMUST00000237853.2 ENSMUST00000237919.2 |
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