Pregenerated sensors for STIMATE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006526Ensembl transcript IDs: ENSMUST00000006701.8, ENSMUST00000227246.2, ENSMUST00000228066.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGTGCTCCTTACCACTGAGAGGCCATCAGACAGTCCCGCCCTGCTaGTCCCACAGCAGGGACAGTGCCAGGCCAGGCTGGCCCACAGGT | + |
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Preference number: 1 (lower is better) Translates to: LCSLPLRGHQTVPPC*SHSRDSARPGWPTG Trigger: ACCTGTGGGCCAGCCTGGCCTGGCACTGTCCCTGCTGTGGGAGCAGCAGGGCGGGACTGTCTGATGGCCTCTCAGTGGTAAGGAGCACAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR GCA 90 bp | CCACAAGGCCGGCAGCCTCAGCTCCAGGACCCGCAACAGTCTGTGTaGTGTTTCCTTCCACCATGCCACCTGGTCAGACAGGACAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: PQGRQPQLQDPQQSV*CFLPPCHLVRQDRG Trigger: CCCCCTGTCCTGTCTGACCAGGTGGCATGGTGGAAGGAAACAGCACACAGACTGTTGCGGGTCCTGGAGCTGAGGCTGCCGGCCTTGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR TCA 90 bp | CCAAGGCAGGGCCTGGCGGACCCGTTCCAGGTCATGGCCTCTGCCTaGCAGGAATGTGCAGCCTCCCACAGCAGACTCACTCTTCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: PRQGLADPFQVMASA*QECAASHSRLTLLS Trigger: ACTGAGAAGAGTGAGTCTGCTGTGGGAGGCTGCACATTCCTGTCAGGCAGAGGCCATGACCTGGAACGGGTCCGCCAGGCCCTGCCTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR GCA 90 bp | GAGACCAAGGCAGGGCCTGGCGGACCCGTTCCAGGTCATGGCCTCTaGCTGACAGGAATGTGCAGCCTCCCACAGCAGACTCACTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: ETKAGPGGPVPGHGL*LTGMCSLPQQTHSS Trigger: AGAAGAGTGAGTCTGCTGTGGGAGGCTGCACATTCCTGTCAGGCAGAGGCCATGACCTGGAACGGGTCCGCCAGGCCCTGCCTTGGTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR TCA 90 bp | AGGCCCTGTGCCTGGGAGCTGGGAGGACCTTACAGACCACCTCTGTaGGGCTGTGCACCCGGAGTTGCCATCCTTCCGTCCTTAACAGCA | + |
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Preference number: 1 (lower is better) Translates to: RPCAWELGGPYRPPL*GCAPGVAILPSLTA Trigger: TGCTGTTAAGGACGGAAGGATGGCAACTCCGGGTGCACAGCCTCACAGAGGTGGTCTGTAAGGTCCTCCCAGCTCCCAGGCACAGGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR GCA 90 bp | GTCACCCGCAGCGTGGGAATGTGTCATACAGGCAGCCCGAAGCGGTaGTTCTTTTTCACAGGTCTCCGGAGGTCCTCCTCGGCGTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: VTRSVGMCHTGSPKR*FFFTGLRRSSSASD Trigger: GTCTGACGCCGAGGAGGACCTCCGGAGACCTGTGAAAAAGAAGCACCGCTTCGGGCTGCCTGTATGACACATTCCCACGCTGCGGGTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227246.2 ENSMUST00000228066.2 |
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| 3UTR TCA 90 bp | CAGACAGGCTCTAGTGGCAGATCCCTGTTGGACCTCCTCTCCTACTaGGCCAACTCCACAGCTGCAGCCCAGAGACGACAGTCCTTAGCG | + |
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Preference number: 1 (lower is better) Translates to: QTGSSGRSLLDLLSY*ANSTAAAQRRQSLA Trigger: CGCTAAGGACTGTCGTCTCTGGGCTGCAGCTGTGGAGTTGGCTCAGTAGGAGAGGAGGTCCAACAGGGATCTGCCACTAGAGCCTGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR GCA 90 bp | CAGTCCTTAGCGGAAATCAGGGTGCAGAAGGAACTTGCACTCACTTaGTTCCTGTCCTCCAGGCCCTGTGCCTGGGAGCTGGGAGGACCT | + |
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Preference number: 1 (lower is better) Translates to: QSLAEIRVQKELALT*FLSSRPCAWELGGP Trigger: AGGTCCTCCCAGCTCCCAGGCACAGGGCCTGGAGGACAGGAAGCAAGTGAGTGCAAGTTCCTTCTGCACCCTGATTTCCGCTAAGGACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR GCA 90 bp | TGCGCACATCCACAGGGAGAGGGAAGGACAGACACACACCACGCTTaGACACAGACAGGCTCTAGTGGCAGATCCCTGTTGGACCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: CAHPQGEGRTDTHHA*TQTGSSGRSLLDLL Trigger: GAGGAGGTCCAACAGGGATCTGCCACTAGAGCCTGTCTGTGTGCAAGCGTGGTGTGTGTCTGTCCTTCCCTCTCCCTGTGGATGTGCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR CCA 90 bp | TGTCCTCTGTGCTTGTCTCACCTAAGGCCTCAGCCCGTGAGGCGGTaGGTGTTCTTGTGCTCCTTACCACTGAGAGGCCATCAGACAGTC | + |
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Preference number: 1 (lower is better) Translates to: CPLCLSHLRPQPVRR*VFLCSLPLRGHQTV Trigger: GACTGTCTGATGGCCTCTCAGTGGTAAGGAGCACAAGAACACCCACCGCCTCACGGGCTGAGGCCTTAGGTGAGACAAGCACAGAGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR TCA 90 bp | CTGACAGGAATGTGCAGCCTCCCACAGCAGACTCACTCTTCTCAGTaGCTTGCGCTAGACAGTGAGCTGAGAGGGCCACCCAGAGCATAC | + |
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Preference number: 1 (lower is better) Translates to: LTGMCSLPQQTHSSQ*LALDSELRGPPRAY Trigger: GTATGCTCTGGGTGGCCCTCTCAGCTCACTGTCTAGCGCAAGTCACTGAGAAGAGTGAGTCTGCTGTGGGAGGCTGCACATTCCTGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR CCA 90 bp | AGCTCTTCGCTTGCATATTTGGTCAGTGTTTGTAGTGCAACTGAGTaGGCACTCCAGCTGCCCACAGCCCCCTCGGGCATGGGTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: SSSLAYLVSVCSATE*ALQLPTAPSGMGPL Trigger: AAGAGGACCCATGCCCGAGGGGGCTGTGGGCAGCTGGAGTGCCCACTCAGTTGCACTACAAACACTGACCAAATATGCAAGCGAAGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR CCA 90 bp | AGGACCCGCAACAGTCTGTGTGCTGTTTCCTTCCACCATGCCACCTaGTCAGACAGGACAGGGGGTCTTACAGAACCCCTAAGGGACAAC | + |
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Preference number: 1 (lower is better) Translates to: RTRNSLCAVSFHHAT*SDRTGGLTEPLRDN Trigger: GTTGTCCCTTAGGGGTTCTGTAAGACCCCCTGTCCTGTCTGACCAGGTGGCATGGTGGAAGGAAACAGCACACAGACTGTTGCGGGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR CCA 90 bp | AAGCAAGCAAGCAGGTGGCAGCTGGTGACAGACCAGGGCAAAGGTTaGCTCTGCAAGCTGCTGTACAGTCAAGGCTGCTGTACAGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: KQASRWQLVTDQGKG*LCKLLYSQGCCTGS Trigger: ACTGCCTGTACAGCAGCCTTGACTGTACAGCAGCTTGCAGAGCCAACCTTTGCCCTGGTCTGTCACCAGCTGCCACCTGCTTGCTTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR CCA 90 bp | CCACCCAGAGCATACCCTTCTGTCTGTGACAAGGAAGGTTTCAAGTaGCAGAAGACAGCCCAGGTATCCTGGGCAAGGGCTAGGGTCACG | + |
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Preference number: 1 (lower is better) Translates to: PPRAYPSVCDKEGFK*QKTAQVSWARARVT Trigger: CGTGACCCTAGCCCTTGCCCAGGATACCTGGGCTGTCTTCTGCCACTTGAAACCTTCCTTGTCACAGACAGAAGGGTATGCTCTGGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR GCA 90 bp | CATATTTGGTCAGTGTTTGTAGTGCAACTGAGTGGGCACTCCAGCTaGCCACAGCCCCCTCGGGCATGGGTCCTCTTCCCTCTTTTAAGT | + |
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Preference number: 1 (lower is better) Translates to: HIWSVFVVQLSGHSS*PQPPRAWVLFPLLS Trigger: ACTTAAAAGAGGGAAGAGGACCCATGCCCGAGGGGGCTGTGGGCAGCTGGAGTGCCCACTCAGTTGCACTACAAACACTGACCAAATATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR CCA 90 bp | GGAGGCTCTCCCAAGGGATGCGGAATTGTATGTGCTTTTGCTGTATaGTTGCATGCGCACATCCACAGGGAGAGGGAAGGACAGACACAC | + |
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Preference number: 1 (lower is better) Translates to: GGSPKGCGIVCAFAV*LHAHIHREREGQTH Trigger: GTGTGTCTGTCCTTCCCTCTCCCTGTGGATGTGCGCATGCAACCATACAGCAAAAGCACATACAATTCCGCATCCCTTGGGAGAGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR GCA 90 bp | GCTCTCCCAAGGGATGCGGAATTGTATGTGCTTTTGCTGTATGGTTaGATGCGCACATCCACAGGGAGAGGGAAGGACAGACACACACCA | + |
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Preference number: 1 (lower is better) Translates to: ALPRDAELYVLLLYG*MRTSTGRGKDRHTP Trigger: TGGTGTGTGTCTGTCCTTCCCTCTCCCTGTGGATGTGCGCATGCAACCATACAGCAAAAGCACATACAATTCCGCATCCCTTGGGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR GCA 90 bp | CAGACTCAGACTCCTCATGGGATGCTGCCCTTCGGTAGCGAACCTTaGTCCCATTCCTTGAGTCCTGGTTGGCTCCTCTTTCTTCTAGTT | + |
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Preference number: 1 (lower is better) Translates to: QTQTPHGMLPFGSEP*SHSLSPGWLLFLLV Trigger: AACTAGAAGAAAGAGGAGCCAACCAGGACTCAAGGAATGGGAGCAAGGTTCGCTACCGAAGGGCAGCATCCCATGAGGAGTCTGAGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
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| 3UTR CCA 90 bp | GGCTGGCAAGCTTCTACCAAGAGCAGCTTGGCCAAGGTACCTATTTaGACAAATCAGATTGACAGCACACCACAGCTAGGTCAGCATTCC | + |
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Preference number: 1 (lower is better) Translates to: GWQASTKSSLAKVPI*TNQIDSTPQLGQHS Trigger: GGAATGCTGACCTAGCTGTGGTGTGCTGTCAATCTGATTTGTCCAAATAGGTACCTTGGCCAAGCTGCTCTTGGTAGAAGCTTGCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR TCA 90 bp | TGCAAGCTGCTGTACAGTCAAGGCTGCTGTACAGGCAGTCAAGGCTaGGGCCATTCTAACACTTGCAATTTAGAGACTGAGATAGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: CKLLYSQGCCTGSQG*GHSNTCNLETEIGR Trigger: CCTGCCTATCTCAGTCTCTAAATTGCAAGTGTTAGAATGGCCTCAGCCTTGACTGCCTGTACAGCAGCCTTGACTGTACAGCAGCTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR CCA 90 bp | ACCTCATTCTTCACCGTGGCTGGCAAGCTTCTACCAAGAGCAGCTTaGCCAAGGTACCTATTTGGACAAATCAGATTGACAGCACACCAC | + |
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Preference number: 1 (lower is better) Translates to: TSFFTVAGKLLPRAA*PRYLFGQIRLTAHH Trigger: GTGGTGTGCTGTCAATCTGATTTGTCCAAATAGGTACCTTGGCCAAGCTGCTCTTGGTAGAAGCTTGCCAGCCACGGTGAAGAATGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR CCA 90 bp | CAAGGGTCCTCTTCAGTGAGATCTGCTAGGTACACATTTGCAAAGTaGATGAAGAGCATCCCTATGGCTTGTTTGGAAGTGTCTAAAAAC | + |
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Preference number: 1 (lower is better) Translates to: QGSSSVRSARYTFAK*MKSIPMACLEVSKN Trigger: GTTTTTAGACACTTCCAAACAAGCCATAGGGATGCTCTTCATCCACTTTGCAAATGTGTACCTAGCAGATCTCACTGAAGAGGACCCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCTCCGGAGGTCCTCCTCGGCGTCAGACTCCTCCATCTCGTCGTCAGCTGAGGGGCAGAGACGCTGTTaGTGCAGGGCTGGGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GLRRSSSASDSSISSSAEGQRRC*CRAGPQ Trigger: CTGGGGCCCAGCCCTGCAGCAACAGCGTCTCTGCCC...CTCAGCTGACGACGAGATGGAGGAGTCTGACGCCGAGGAGGACCTCCGGAGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227246.2 ENSMUST00000228066.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTAGTGCAACTGAGTGGGCACTCCAGCTGCCCACAGCCCCCTCGGGCATGGGGCAGAGACGCTGTTaGTGCAGGGCTGGGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VCSATEWALQLPTAPSGMGQRRC*CRAGPQ Trigger: CTGGGGCCCAGCCCTGCAGCAACAGCGTCTCTGCCC...CATGCCCGAGGGGGCTGTGGGCAGCTGGAGTGCCCACTCAGTTGCACTACAAAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCTCTGTGCTTGTCTCACCTAAGGCCTCAGCCCGTGAGGCGGTGGGTGTTGCAGCTTGTATGCCCTaGCAGGGCTCTGTCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LSSVLVSPKASAREAVGVAACMP*QGSVCP Trigger: GGGACAGACAGAGCCCTGCCAGGGCATACAAGCTGC...AACACCCACCGCCTCACGGGCTGAGGCCTTAGGTGAGACAAGCACAGAGGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCTCTGTGCTTGTCTCACCTAAGGCCTCAGCCCGTGAGGCGGTGGGTGTTTTCCACCATGCCACCTaGTCAGACAGGACAGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: LSSVLVSPKASAREAVGVFHHAT*SDRTGG Trigger: ACCCCCTGTCCTGTCTGACCAGGTGGCATGGTGGAA...AACACCCACCGCCTCACGGGCTGAGGCCTTAGGTGAGACAAGCACAGAGGACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTGTCTGTGACAAGGAAGGTTTCAAGTGGCAGAAGACAGCCCAGGTATCCGGGCAGAGACGCTGTTaGTGCAGGGCTGGGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PSVCDKEGFKWQKTAQVSGQRRC*CRAGPQ Trigger: CTGGGGCCCAGCCCTGCAGCAACAGCGTCTCTGCCC...GGATACCTGGGCTGTCTTCTGCCACTTGAAACCTTCCTTGTCACAGACAGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCTCTGTGCTTGTCTCACCTAAGGCCTCAGCCCGTGAGGCGGTGGGTGTTTGTAGTGCAACTGAGTaGGCACTCCAGCTGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: LSSVLVSPKASAREAVGVCSATE*ALQLPT Trigger: TGTGGGCAGCTGGAGTGCCCACTCAGTTGCACTACA...AACACCCACCGCCTCACGGGCTGAGGCCTTAGGTGAGACAAGCACAGAGGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR CCA 90 bp | GATGCGGAATTGTATGTGCTTTTGCTGTATGGTTGCATGCGCACATCCACAGGGGTCGTCTGGGGCGGGTaGAGAGCGGGCAGAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: DAELYVLLLYGCMRTSTGVVWGG*RAGRDS Trigger: GCTGTCTCTGCCCGCTCTCCACCCGCCCCAGACGAC...CCCTGTGGATGTGCGCATGCAACCATACAGCAAAAGCACATACAATTCCGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR CAA 90 bp | TACATCCACTCCAGTGAGACAGTGCACCACGGTGACAGAAAGGCCTaGTCGGCCACCGGAGGCTCTCCCAAGGGATGCGGAATTGTATGT | + |
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Preference number: 2 (lower is better) Translates to: YIHSSETVHHGDRKA*SATGGSPKGCGIVC Trigger: ACATACAATTCCGCATCCCTTGGGAGAGCCTCCGGTGGCCGACAAGGCCTTTCTGTCACCGTGGTGCACTGTCTCACTGGAGTGGATGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGCTGTATGGTTGCATGCGCACATCCACAGGGAGAGGGAAGGACAGACACGTCATGGCCTCTGCCTaGCAGGAATGTGCAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LLLYGCMRTSTGRGKDRHVMASA*QECAAS Trigger: GGAGGCTGCACATTCCTGTCAGGCAGAGGCCATGAC...GTGTCTGTCCTTCCCTCTCCCTGTGGATGTGCGCATGCAACCATACAGCAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGTATGGTTGCATGCGCACATCCACAGGGAGAGGGAAGGACAGACACACAGACAGTGCACCACGGTaGCAGAAAGGCCTTGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: LLYGCMRTSTGRGKDRHTDSAPR*QKGLVG Trigger: GCCGACAAGGCCTTTCTGTCACCGTGGTGCACTGTC...TGTGTGTCTGTCCTTCCCTCTCCCTGTGGATGTGCGCATGCAACCATACAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR GCA 90 bp | GACCTTAACTATGGATCTGTGAGCGCAGATAAGCGCTATCTCTCTACCTTCCCAAGTGGGCACTCCAGCTaGCCACAGCCCCCTCGGGCA | + |
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Preference number: 2 (lower is better) Translates to: DLNYGSVSADKRYLSTFPSGHSS*PQPPRA Trigger: TGCCCGAGGGGGCTGTGGGCAGCTGGAGTGCCCACT...TGGGAAGGTAGAGAGATAGCGCTTATCTGCGCTCACAGATCCATAGTTAAGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTGCAGAAGGAACTTGCACTCACTTGCTTCCTGTCCTCCAGGCCCTGTGCCTGTTGGCTCTGCAAGCTaGTGTACAGTCAAGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GCRRNLHSLASCPPGPVPVGSAS*CTVKAA Trigger: AGCAGCCTTGACTGTACAGCAGCTTGCAGAGCCAAC...AGGCACAGGGCCTGGAGGACAGGAAGCAAGTGAGTGCAAGTTCCTTCTGCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGTCTGCTCTGCTGCAGTTATTTCACAACTTTGTAGGGCATCATGACAGGGTCGTCTGGGGCGGGTaGAGAGCGGGCAGAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: PVSALLQLFHNFVGHHDRVVWGG*RAGRDS Trigger: GCTGTCTCTGCCCGCTCTCCACCCGCCCCAGACGAC...CCTGTCATGATGCCCTACAAAGTTGTGAAATAACTGCAGCAGAGCAGACACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGTATGGTTGCATGCGCACATCCACAGGGAGAGGGAAGGACAGACACACAGCAGCTTGTATGCCCTaGCAGGGCTCTGTCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LLYGCMRTSTGRGKDRHTAACMP*QGSVCP Trigger: GGGACAGACAGAGCCCTGCCAGGGCATACAAGCTGC...TGTGTGTCTGTCCTTCCCTCTCCCTGTGGATGTGCGCATGCAACCATACAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGCTAGGGTCACGGGCCACAAGCATATTTAGAGCCTGTATGCTTATGCAAAGCCCGGCTGAGGAGTaGGTGTGGCCAGCAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: QGLGSRATSIFRACMLMQSPAEE*VWPAER Trigger: CCTCTCTGCTGGCCACACCCACTCCTCAGCCGGGCT...TTGCATAAGCATACAGGCTCTAAATATGCTTGTGGCCCGTGACCCTAGCCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGTGGCAGAAGACAGCCCAGGTATCCTGGGCAAGGGCTAGGGTCACGGGCCCTAGCTCATTCCCCATaGAAGGCAAACAAATCCATG | + |
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Preference number: 2 (lower is better) Translates to: SSGRRQPRYPGQGLGSRALAHSP*KANKSM Trigger: CATGGATTTGTTTGCCTTTCATGGGGAATGAGCTAG...GGCCCGTGACCCTAGCCCTTGCCCAGGATACCTGGGCTGTCTTCTGCCACTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTGCAGAAGGAACTTGCACTCACTTGCTTCCTGTCCTCCAGGCCCTGTGCCTATGCAAAGCACACTCTaGCCTAGGCTTAGGGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: GCRRNLHSLASCPPGPVPMQSTL*PRLRGS Trigger: AGAACCCCTAAGCCTAGGTCAGAGTGTGCTTTGCAT...AGGCACAGGGCCTGGAGGACAGGAAGCAAGTGAGTGCAAGTTCCTTCTGCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCAGGTATCCTGGGCAAGGGCTAGGGTCACGGGCCACAAGCATATTTAGAGTTGGCTCTGCAAGCTaGTGTACAGTCAAGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: QPRYPGQGLGSRATSIFRVGSAS*CTVKAA Trigger: AGCAGCCTTGACTGTACAGCAGCTTGCAGAGCCAAC...TCTAAATATGCTTGTGGCCCGTGACCCTAGCCCTTGCCCAGGATACCTGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR CAA 90 bp | GGCTCTCCCAAGGGATGCGGAATTGTATGTGCTTTTGCTGTATGGTaGCATGCGCACATCCACAGGGAGAGGGAAGGACAGACACACACC | + |
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Preference number: 2 (lower is better) Translates to: GSPKGCGIVCAFAVW*HAHIHREREGQTHT Trigger: GGTGTGTGTCTGTCCTTCCCTCTCCCTGTGGATGTGCGCATGCAACCATACAGCAAAAGCACATACAATTCCGCATCCCTTGGGAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCCAAGGGATGCGGAATTGTATGTGCTTTTGCTGTATGGTTGCATGCGCACCTGTGCCTGGGAGCTaGGAGGACCTTACAGACCAC | + |
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Preference number: 2 (lower is better) Translates to: LSQGMRNCMCFCCMVACAPVPGS*EDLTDH Trigger: GTGGTCTGTAAGGTCCTCCCAGCTCCCAGGCACAGG...TGCGCATGCAACCATACAGCAAAAGCACATACAATTCCGCATCCCTTGGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCAGAAGGAACTTGCACTCACTTGCTTCCTGTCCTCCAGGCCCTGTGCCTATTCCTGTTCCAACTTaGGTCAACCAGCAACTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: GCRRNLHSLASCPPGPVPIPVPT*VNQQLL Trigger: TAGCAGTTGCTGGTTGACCCAAGTTGGAACAGGAAT...AGGCACAGGGCCTGGAGGACAGGAAGCAAGTGAGTGCAAGTTCCTTCTGCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CCA 90 bp | GACCTTAACTATGGATCTGTGAGCGCAGATAAGCGCTATCTCTCTACCTTCCCAAGTGCCAGGCCAGGCTaGCCCACAGGTAAACCACAG | + |
|
Preference number: 2 (lower is better) Translates to: DLNYGSVSADKRYLSTFPSARPG*PTGKPQ Trigger: CTGTGGTTTACCTGTGGGCCAGCCTGGCCTGGCACT...TGGGAAGGTAGAGAGATAGCGCTTATCTGCGCTCACAGATCCATAGTTAAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGTGCAGAAGGAACTTGCACTCACTTGCTTCCTGTCCTCCAGGCCCTGTGCCTAACGATGGAAGAAAATaGGAACTGAGACCAAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: GCRRNLHSLASCPPGPVPNDGRK*ELRPRQ Trigger: CTGCCTTGGTCTCAGTTCCCATTTTCTTCCATCGTT...AGGCACAGGGCCTGGAGGACAGGAAGCAAGTGAGTGCAAGTTCCTTCTGCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCTCTGCAAGCTGCTGTACAGTCAAGGCTGCTGTACAGGCAGTCAAGGCTGCGTGTAACTCCTGAGTaGAGTTTAACCATTGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LALQAAVQSRLLYRQSRLRVTPE*SLTIAS Trigger: GGAGGCAATGGTTAAACTTCACTCAGGAGTTACACG...CAGCCTTGACTGCCTGTACAGCAGCCTTGACTGTACAGCAGCTTGCAGAGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGGCTAGGGTCACGGGCCACAAGCATATTTAGAGCCTGTATGCTTATGCAATGTGCTCCTTACCACTaGGAGGCCATCAGACAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: QGLGSRATSIFRACMLMQCAPYH*EAIRQS Trigger: GGACTGTCTGATGGCCTCTCAGTGGTAAGGAGCACA...TTGCATAAGCATACAGGCTCTAAATATGCTTGTGGCCCGTGACCCTAGCCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCTGTCTGTGACAAGGAAGGTTTCAAGTGGCAGAAGACAGCCCAGGTATCCAGCTCACCAGGAGTTTaGGCTCAGTGGAAGCTCACT | + |
|
Preference number: 2 (lower is better) Translates to: PSVCDKEGFKWQKTAQVSSSPGV*AQWKLT Trigger: AGTGAGCTTCCACTGAGCTCAAACTCCTGGTGAGCT...GGATACCTGGGCTGTCTTCTGCCACTTGAAACCTTCCTTGTCACAGACAGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTGTATGGTTGCATGCGCACATCCACAGGGAGAGGGAAGGACAGACACACACCTCTGTGTCTAGCTTaGAAACTCCAGGAGCTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LLYGCMRTSTGRGKDRHTPLCLA*KLQELE Trigger: CTCAAGCTCCTGGAGTTTCCAAGCTAGACACAGAGG...TGTGTGTCTGTCCTTCCCTCTCCCTGTGGATGTGCGCATGCAACCATACAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTGCTGTATGGTTGCATGCGCACATCCACAGGGAGAGGGAAGGACAGACACGCCACCTTTTTCCACTaGAGTATGAGGAGGACGATG | + |
|
Preference number: 2 (lower is better) Translates to: LLLYGCMRTSTGRGKDRHATFFH*SMRRTM Trigger: CATCGTCCTCCTCATACTCCAGTGGAAAAAGGTGGC...GTGTCTGTCCTTCCCTCTCCCTGTGGATGTGCGCATGCAACCATACAGCAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGTTTCAAGTGGCAGAAGACAGCCCAGGTATCCTGGGCAAGGGCTAGGGTCTTGCAATTTAGAGACTaGGATAGGCAGGAAACCAAC | + |
|
Preference number: 2 (lower is better) Translates to: EGFKWQKTAQVSWARARVLQFRD*DRQETN Trigger: GTTGGTTTCCTGCCTATCTCAGTCTCTAAATTGCAA...GACCCTAGCCCTTGCCCAGGATACCTGGGCTGTCTTCTGCCACTTGAAACCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGCTTGGCCAAGGTACCTATTTGGACAAATCAGATTGACAGCACACCACAGGAAGAAAATGGGAACTaGGACCAAGGCAGGGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SSLAKVPIWTNQIDSTPQEENGN*DQGRAW Trigger: CCAGGCCCTGCCTTGGTCTCAGTTCCCATTTTCTTC...CTGTGGTGTGCTGTCAATCTGATTTGTCCAAATAGGTACCTTGGCCAAGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR TCA 90 bp | GCGTGGGAATGTGTCATACAGGCAGCCCGAAGCGGTGCTTCTTTTTCACAGGTCCATTTGCAAAGTGGATaGAGAGCATCCCTATGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: AWECVIQAARSGASFSQVHLQSG*RASLWL Trigger: AAGCCATAGGGATGCTCTTCATCCACTTTGCAAATG...GACCTGTGAAAAAGAAGCACCGCTTCGGGCTGCCTGTATGACACATTCCCACGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGTGCAGAAGGAACTTGCACTCACTTGCTTCCTGTCCTCCAGGCCCTGTGCCTACAAAGCTCTTCGCTTaGATATTTGGTCAGTGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: GCRRNLHSLASCPPGPVPTKLFA*IFGQCL Trigger: CAAACACTGACCAAATATGCAAGCGAAGAGCTTTGT...AGGCACAGGGCCTGGAGGACAGGAAGCAAGTGAGTGCAAGTTCCTTCTGCACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGTGTCTGCTCTGCTGCAGTTATTTCACAACTTTGTAGGGCATCATGACAGGTGTAGTGCAACTGAGTaGGCACTCCAGCTGCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: PVSALLQLFHNFVGHHDRCSATE*ALQLPT Trigger: TGTGGGCAGCTGGAGTGCCCACTCAGTTGCACTACA...CCTGTCATGATGCCCTACAAAGTTGTGAAATAACTGCAGCAGAGCAGACACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CCA 90 bp | CGTCAGACTCCTCCATCTCGTCGTCAGCTGAGATCAGGATCTCAGACTCAGACTCCATTCCTTGAGTCCTaGTTGGCTCCTCTTTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RQTPPSRRQLRSGSQTQTPFLES*LAPLSS Trigger: AGAAGAAAGAGGAGCCAACCAGGACTCAAGGAATGG...AGTCTGAGTCTGAGATCCTGATCTCAGCTGACGACGAGATGGAGGAGTCTGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227246.2 ENSMUST00000228066.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGCTTGGCCAAGGTACCTATTTGGACAAATCAGATTGACAGCACACCACAGGAGAAGGGGAGAGAATaGCCACTGCTGAACGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: SSLAKVPIWTNQIDSTPQEKGRE*PLLNDG Trigger: TCCATCGTTCAGCAGTGGTCATTCTCTCCCCTTCTC...CTGTGGTGTGCTGTCAATCTGATTTGTCCAAATAGGTACCTTGGCCAAGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAAAGCATTCCTGTTCCAACTTGGGTCAACCAGCAACTGCTAACCTCAAGCACTGTTTCCTTCCACCATaGCACCTGGTCAGACAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: RKHSCSNLGQPATANLKHCFLPP*HLVRQD Trigger: GTCCTGTCTGACCAGGTGGCATGGTGGAAGGAAACA...GTGCTTGAGGTTAGCAGTTGCTGGTTGACCCAAGTTGGAACAGGAATGCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CCA 90 bp | CAACCTACACATTCAAACACGACTCACACCAGTGTCTGCTCTGCTGCAGTTATTAAGCAAGCAAGCAGGTaGCAGCTGGTGACAGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: QPTHSNTTHTSVCSAAVIKQASR*QLVTDQ Trigger: CTGGTCTGTCACCAGCTGCCACCTGCTTGCTTGCTT...AATAACTGCAGCAGAGCAGACACTGGTGTGAGTCGTGTTTGAATGTGTAGGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGCGTGGGAATGTGTCATACAGGCAGCCCGAAGCGGTGCTTCTTTTTCACAGGTCCCTATGGCTTGTTTaGAAGTGTCTAAAAACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: QRGNVSYRQPEAVLLFHRSLWLV*KCLKTG Trigger: GCCTGTTTTTAGACACTTCCAAACAAGCCATAGGGA...CCTGTGAAAAAGAAGCACCGCTTCGGGCTGCCTGTATGACACATTCCCACGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
||
| 3UTR CAA 90 bp | AACCTCATTCTTCACCGTGGCTGGCAAGCTTCTACCAAGAGCAGCTaGGCCAAGGTACCTATTTGGACAAATCAGATTGACAGCACACCA | + |
|
Preference number: 2 (lower is better) Translates to: NLILHRGWQASTKSS*AKVPIWTNQIDSTP Trigger: TGGTGTGCTGTCAATCTGATTTGTCCAAATAGGTACCTTGGCCAAGCTGCTCTTGGTAGAAGCTTGCCAGCCACGGTGAAGAATGAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGGCTAGGGTCACGGGCCACAAGCATATTTAGAGCCTGTATGCTTATGCAACGTGTAACTCCTGAGTaGAGTTTAACCATTGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QGLGSRATSIFRACMLMQRVTPE*SLTIAS Trigger: GGAGGCAATGGTTAAACTTCACTCAGGAGTTACACG...TTGCATAAGCATACAGGCTCTAAATATGCTTGTGGCCCGTGACCCTAGCCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGCTTGGCCAAGGTACCTATTTGGACAAATCAGATTGACAGCACACCACAGACTCACTCTTCTCAGTaGCTTGCGCTAGACAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SSLAKVPIWTNQIDSTPQTHSSQ*LALDSE Trigger: CTCACTGTCTAGCGCAAGTCACTGAGAAGAGTGAGT...CTGTGGTGTGCTGTCAATCTGATTTGTCCAAATAGGTACCTTGGCCAAGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGTTTCAAGTGGCAGAAGACAGCCCAGGTATCCTGGGCAAGGGCTAGGGTCGGCCATTCTAACACTTaGAATTTAGAGACTGAGATA | + |
|
Preference number: 2 (lower is better) Translates to: EGFKWQKTAQVSWARARVGHSNT*NLETEI Trigger: TATCTCAGTCTCTAAATTGCAAGTGTTAGAATGGCC...GACCCTAGCCCTTGCCCAGGATACCTGGGCTGTCTTCTGCCACTTGAAACCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTTTGAGTTAAGAAAGCATTCCTGTTCCAACTTGGGTCAACCAGCAACTGCTTTCCACCATGCCACCTaGTCAGACAGGACAGGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: HFELRKHSCSNLGQPATAFHHAT*SDRTGG Trigger: ACCCCCTGTCCTGTCTGACCAGGTGGCATGGTGGAA...AGCAGTTGCTGGTTGACCCAAGTTGGAACAGGAATGCTTTCTTAACTCAAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR CCA 90 bp | GATGCGGAATTGTATGTGCTTTTGCTGTATGGTTGCATGCGCACATCCACAGGGAAGGAAGGTTTCAAGTaGCAGAAGACAGCCCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: DAELYVLLLYGCMRTSTGKEGFK*QKTAQV Trigger: TACCTGGGCTGTCTTCTGCCACTTGAAACCTTCCTT...CCCTGTGGATGTGCGCATGCAACCATACAGCAAAAGCACATACAATTCCGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR TCA 90 bp | GATGCGGAATTGTATGTGCTTTTGCTGTATGGTTGCATGCGCACATCCACAGGGATACCCTTCTGTCTGTaGCAAGGAAGGTTTCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: DAELYVLLLYGCMRTSTGIPFCL*QGRFQV Trigger: CACTTGAAACCTTCCTTGTCACAGACAGAAGGGTAT...CCCTGTGGATGTGCGCATGCAACCATACAGCAAAAGCACATACAATTCCGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGTCTGCTCTGCTGCAGTTATTTCACAACTTTGTAGGGCATCATGACAGGACTTTTCAAAGATCATaGTCACGATGTAGAGGGCGC | + |
|
Preference number: 2 (lower is better) Translates to: PVSALLQLFHNFVGHHDRTFQRS*SRCRGR Trigger: GCGCCCTCTACATCGTGATCATGATCTTTGAAAAGT...CCTGTCATGATGCCCTACAAAGTTGTGAAATAACTGCAGCAGAGCAGACACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGGGCTAGGGTCACGGGCCACAAGCATATTTAGAGCCTGTATGCTTATGCAACAGTGTCTGCTCTGCTaGAGTTATTTCACAACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: QGLGSRATSIFRACMLMQQCLLC*SYFTTL Trigger: CAAAGTTGTGAAATAACTGCAGCAGAGCAGACACTG...TTGCATAAGCATACAGGCTCTAAATATGCTTGTGGCCCGTGACCCTAGCCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGCTTGGCCAAGGTACCTATTTGGACAAATCAGATTGACAGCACACCACAGTTGCAATTTAGAGACTaGGATAGGCAGGAAACCAAC | + |
|
Preference number: 2 (lower is better) Translates to: SSLAKVPIWTNQIDSTPQLQFRD*DRQETN Trigger: GTTGGTTTCCTGCCTATCTCAGTCTCTAAATTGCAA...CTGTGGTGTGCTGTCAATCTGATTTGTCCAAATAGGTACCTTGGCCAAGCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTTTGAGTTAAGAAAGCATTCCTGTTCCAACTTGGGTCAACCAGCAACTGCTGTTGATGAGGTACAGTaGACAAGGGTCCTCTTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: HFELRKHSCSNLGQPATAVDEVQ*TRVLFS Trigger: ACTGAAGAGGACCCTTGTTCACTGTACCTCATCAAC...AGCAGTTGCTGGTTGACCCAAGTTGGAACAGGAATGCTTTCTTAACTCAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
||
| 3UTR-3UTR CCA 90 bp | GACCTTAACTATGGATCTGTGAGCGCAGATAAGCGCTATCTCTCTACCTTCCCACTTCGCTTGCATATTTaGTCAGTGTTTGTAGTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: DLNYGSVSADKRYLSTFPLRLHI*SVFVVQ Trigger: TTGCACTACAAACACTGACCAAATATGCAAGCGAAG...TGGGAAGGTAGAGAGATAGCGCTTATCTGCGCTCACAGATCCATAGTTAAGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CCA 72 bp | GCAGAGAGGAGGGCAGAGACGCTGTTGCTGCAGGGCTaGGCCCCAGGACTGTCACCCGCAGCGTGGGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: AERRAETLLLQG*APGLSPAAWEC Trigger: ACATTCCCACGCTGCGGGTGACAGTCCTGGGGCCCAGCCCTGCAGCAACAGCGTCTCTGCCCTCCTCTCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 ENSMUST00000228066.2 |
||
| 3UTR GCA 72 bp | GCAGGGCCTGGCGGACCCGTTCCAGGTCATGGCCTCTaGCTGACAGGAATGTGCAGCCTCCCACAGCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: AGPGGPVPGHGL*LTGMCSLPQQT Trigger: AGTCTGCTGTGGGAGGCTGCACATTCCTGTCAGGCAGAGGCCATGACCTGGAACGGGTCCGCCAGGCCCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCACCCGCAGCGTGGGAATGTGTCATACAGGCAGCCCGAAGCGGTGCTTCTAGGGCAGAGACGCTGTaGCTGCAGGGCTGGGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LSPAAWECVIQAARSGASRAETL*LQGWAP Trigger: TGGGGCCCAGCCCTGCAGCAACAGCGTCTCTGCCCT...AGAAGCACCGCTTCGGGCTGCCTGTATGACACATTCCCACGCTGCGGGTGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227246.2 ENSMUST00000228066.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCAGGTATCCTGGGCAAGGGCTAGGGTCACGGGCCACAAGCATATTTAGAAGGGCAGAGACGCTGTaGCTGCAGGGCTGGGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QPRYPGQGLGSRATSIFRRAETL*LQGWAP Trigger: TGGGGCCCAGCCCTGCAGCAACAGCGTCTCTGCCCT...TCTAAATATGCTTGTGGCCCGTGACCCTAGCCCTTGCCCAGGATACCTGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCAAGCTGCTGTACAGTCAAGGCTGCTGTACAGGCAGTCAAGGCTGAGGCCAGGGCAGAGACGCTGTaGCTGCAGGGCTGGGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SASCCTVKAAVQAVKAEARAETL*LQGWAP Trigger: TGGGGCCCAGCCCTGCAGCAACAGCGTCTCTGCCCT...GGCCTCAGCCTTGACTGCCTGTACAGCAGCCTTGACTGTACAGCAGCTTGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAAGGAACTTGCACTCACTTGCTTCCTGTCCTCCAGGCCCTGTGCCTGGGAGGTGACAGAAAGGCCTaGTCGGCCACCGGAGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: AEGTCTHLLPVLQALCLGGDRKA*SATGGS Trigger: AGAGCCTCCGGTGGCCGACAAGGCCTTTCTGTCACC...TCCCAGGCACAGGGCCTGGAGGACAGGAAGCAAGTGAGTGCAAGTTCCTTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR GCA 72 bp | TCAGTGTTTGTAGTGCAACTGAGTGGGCACTCCAGCTaGCCACAGCCCCCTCGGGCATGGGTCCTCTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SVFVVQLSGHSS*PQPPRAWVLFP Trigger: AGGGAAGAGGACCCATGCCCGAGGGGGCTGTGGGCAGCTGGAGTGCCCACTCAGTTGCACTACAAACACTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR GCA 72 bp | GCGGAAATCAGGGTGCAGAAGGAACTTGCACTCACTTaGTTCCTGTCCTCCAGGCCCTGTGCCTGGGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AEIRVQKELALT*FLSSRPCAWEL Trigger: CAGCTCCCAGGCACAGGGCCTGGAGGACAGGAAGCAAGTGAGTGCAAGTTCCTTCTGCACCCTGATTTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR GCA 72 bp | TCTCCATATTCTCCAAAACGCAGGGATTCCCACTGCTaGCACTCCACCAAGACACCGACGGCGCGTACGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SPYSPKRRDSHC*HSTKTPTARTP Trigger: GGGCGTACGCGCCGTCGGTGTCTTGGTGGAGTGGCAGCAGTGGGAATCCCTGCGTTTTGGAGAATATGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
||
| 3UTR GCA 72 bp | GGGTCTCCATATTCTCCAAAACGCAGGGATTCCCACTaGTGCCACTCCACCAAGACACCGACGGCGCGTACG | + |
|
Preference number: 3 (lower is better) Translates to: GSPYSPKRRDSH*CHSTKTPTART Trigger: CGTACGCGCCGTCGGTGTCTTGGTGGAGTGGCAGCAGTGGGAATCCCTGCGTTTTGGAGAATATGGAGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGAACTTGCACTCACTTGCTTCCTGTCCTCCAGGCCCTGTGCCTGGGAGCCCTTGCTCCCATTCCTaGAGTCCTGGTTGGCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RRNLHSLASCPPGPVPGSPCSHS*SPGWLL Trigger: GAGGAGCCAACCAGGACTCAAGGAATGGGAGCAAGG...GCTCCCAGGCACAGGGCCTGGAGGACAGGAAGCAAGTGAGTGCAAGTTCCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
||
| 3UTR TCA 72 bp | ATGTGCAGCCTCCCACAGCAGACTCACTCTTCTCAGTaGCTTGCGCTAGACAGTGAGCTGAGAGGGCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: MCSLPQQTHSSQ*LALDSELRGPP Trigger: GGGTGGCCCTCTCAGCTCACTGTCTAGCGCAAGTCACTGAGAAGAGTGAGTCTGCTGTGGGAGGCTGCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR TCA 72 bp | TCTAGTGGCAGATCCCTGTTGGACCTCCTCTCCTACTaGGCCAACTCCACAGCTGCAGCCCAGAGACGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SSGRSLLDLLSY*ANSTAAAQRRQ Trigger: CTGTCGTCTCTGGGCTGCAGCTGTGGAGTTGGCTCAGTAGGAGAGGAGGTCCAACAGGGATCTGCCACTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR GCA 72 bp | AGCGTGGGAATGTGTCATACAGGCAGCCCGAAGCGGTaGTTCTTTTTCACAGGTCTCCGGAGGTCCTCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: SVGMCHTGSPKR*FFFTGLRRSSS Trigger: CGAGGAGGACCTCCGGAGACCTGTGAAAAAGAAGCACCGCTTCGGGCTGCCTGTATGACACATTCCCACGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000227246.2 ENSMUST00000228066.2 |
||
| 3UTR CCA 72 bp | TTAACCATTGCCTCCAACACGGCAGCTTGTATGCCCTaGCAGGGCTCTGTCTGTCCCCACACTGGAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LTIASNTAACMP*QGSVCPHTGAA Trigger: AGCTGCTCCAGTGTGGGGACAGACAGAGCCCTGCCAGGGCATACAAGCTGCCGTGTTGGAGGCAATGGTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CCA 72 bp | AGCAGGTGGCAGCTGGTGACAGACCAGGGCAAAGGTTaGCTCTGCAAGCTGCTGTACAGTCAAGGCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SRWQLVTDQGKG*LCKLLYSQGCC Trigger: ACAGCAGCCTTGACTGTACAGCAGCTTGCAGAGCCAACCTTTGCCCTGGTCTGTCACCAGCTGCCACCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CCA 72 bp | CCACAGGTAAACCACAGCCCGGCTGAGGAGTGGGTGTaGCCAGCAGAGAGGAGCCAGTTAGAAATGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: PQVNHSPAEEWV*PAERSQLEMPH Trigger: ATGAGGCATTTCTAACTGGCTCCTCTCTGCTGGCCACACCCACTCCTCAGCCGGGCTGTGGTTTACCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR TCA 72 bp | CCACCAAGACACCGACGGCGCGTACGCCCACATAAATaGGCAGCATGCCTACAGTGGCGTCCAGAAGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PPRHRRRVRPHK*AACLQWRPEES Trigger: ACTTTCTTCTGGACGCCACTGTAGGCATGCTGCTCATTTATGTGGGCGTACGCGCCGTCGGTGTCTTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
||
| 3UTR TCA 72 bp | CTCCTCGGCGTCAGACTCCTCCATCTCGTCGTCAGCTaGGATCAGGATCTCAGACTCAGACTCCTCATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLGVRLLHLVVS*DQDLRLRLLMG Trigger: TCCCATGAGGAGTCTGAGTCTGAGATCCTGATCTCAGCTGACGACGAGATGGAGGAGTCTGACGCCGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227246.2 ENSMUST00000228066.2 |
||
| 3UTR GCA 72 bp | GACCCGCAACAGTCTGTGTGCTGTTTCCTTCCACCATaGCACCTGGTCAGACAGGACAGGGGGTCTTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: DPQQSVCCFLPP*HLVRQDRGSYR Trigger: TCTGTAAGACCCCCTGTCCTGTCTGACCAGGTGGCATGGTGGAAGGAAACAGCACACAGACTGTTGCGGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR GCA 72 bp | GTTGGACCTCCTCTCCTACTGAGCCAACTCCACAGCTaGAGCCCAGAGACGACAGTCCTTAGCGGAAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: VGPPLLLSQLHS*SPETTVLSGNQ Trigger: CTGATTTCCGCTAAGGACTGTCGTCTCTGGGCTGCAGCTGTGGAGTTGGCTCAGTAGGAGAGGAGGTCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CCA 72 bp | CTTGCATATTTGGTCAGTGTTTGTAGTGCAACTGAGTaGGCACTCCAGCTGCCCACAGCCCCCTCGGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: LAYLVSVCSATE*ALQLPTAPSGM Trigger: CATGCCCGAGGGGGCTGTGGGCAGCTGGAGTGCCCACTCAGTTGCACTACAAACACTGACCAAATATGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CCA 72 bp | CTTGCACACAGACAGGCTCTAGTGGCAGATCCCTGTTaGACCTCCTCTCCTACTGAGCCAACTCCACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LAHRQALVADPC*TSSPTEPTPQL Trigger: CAGCTGTGGAGTTGGCTCAGTAGGAGAGGAGGTCCAACAGGGATCTGCCACTAGAGCCTGTCTGTGTGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR TCA 72 bp | GCAGACTCACTCTTCTCAGTGACTTGCGCTAGACAGTaGGCTGAGAGGGCCACCCAGAGCATACCCTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ADSLFSVTCARQ*AERATQSIPFC Trigger: ACAGAAGGGTATGCTCTGGGTGGCCCTCTCAGCTCACTGTCTAGCGCAAGTCACTGAGAAGAGTGAGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR GCA 72 bp | ACAGTCCTTAGCGGAAATCAGGGTGCAGAAGGAACTTaGACTCACTTGCTTCCTGTCCTCCAGGCCCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TVLSGNQGAEGT*THLLPVLQALC Trigger: GCACAGGGCCTGGAGGACAGGAAGCAAGTGAGTGCAAGTTCCTTCTGCACCCTGATTTCCGCTAAGGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR GCA 72 bp | ACTCCTCATGGGATGCTGCCCTTCGGTAGCGAACCTTaGTCCCATTCCTTGAGTCCTGGTTGGCTCCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TPHGMLPFGSEP*SHSLSPGWLLF Trigger: AAAGAGGAGCCAACCAGGACTCAAGGAATGGGAGCAAGGTTCGCTACCGAAGGGCAGCATCCCATGAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227246.2 ENSMUST00000228066.2 |
||
| 3UTR CCA 72 bp | GAAGGTTTCAAGTGGCAGAAGACAGCCCAGGTATCCTaGGCAAGGGCTAGGGTCACGGGCCACAAGCATATT | + |
|
Preference number: 3 (lower is better) Translates to: EGFKWQKTAQVS*ARARVTGHKHI Trigger: AATATGCTTGTGGCCCGTGACCCTAGCCCTTGCCCAGGATACCTGGGCTGTCTTCTGCCACTTGAAACCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR GCA 72 bp | AAGGCCTTGTCGGCCACCGGAGGCTCTCCCAAGGGATaGGGAATTGTATGTGCTTTTGCTGTATGGTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: KALSATGGSPKG*GIVCAFAVWLH Trigger: ATGCAACCATACAGCAAAAGCACATACAATTCCGCATCCCTTGGGAGAGCCTCCGGTGGCCGACAAGGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CCA 72 bp | AACAGTCTGTGTGCTGTTTCCTTCCACCATGCCACCTaGTCAGACAGGACAGGGGGTCTTACAGAACCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: NSLCAVSFHHAT*SDRTGGLTEPL Trigger: TAGGGGTTCTGTAAGACCCCCTGTCCTGTCTGACCAGGTGGCATGGTGGAAGGAAACAGCACACAGACTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CCA 72 bp | GCATACCCTTCTGTCTGTGACAAGGAAGGTTTCAAGTaGCAGAAGACAGCCCAGGTATCCTGGGCAAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: AYPSVCDKEGFK*QKTAQVSWARA Trigger: AGCCCTTGCCCAGGATACCTGGGCTGTCTTCTGCCACTTGAAACCTTCCTTGTCACAGACAGAAGGGTATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGGACCTCCTCTCCTACTGAGCCAACTCCACAGCTGCAGCCCAGAGACGACCCAAGGGATGCGGAATaGTATGTGCTTTTGCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: CWTSSPTEPTPQLQPRDDPRDAE*YVLLLY Trigger: ATACAGCAAAAGCACATACAATTCCGCATCCCTTGG...GTCGTCTCTGGGCTGCAGCTGTGGAGTTGGCTCAGTAGGAGAGGAGGTCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CCA 72 bp | CCCAAGGGATGCGGAATTGTATGTGCTTTTGCTGTATaGTTGCATGCGCACATCCACAGGGAGAGGGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PKGCGIVCAFAV*LHAHIHREREG Trigger: TCCTTCCCTCTCCCTGTGGATGTGCGCATGCAACCATACAGCAAAAGCACATACAATTCCGCATCCCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCTTAACTATGGATCTGTGAGCGCAGATAAGCGCTATCTCTCTACCTTCCCAAGCTGTCCTCTGTGCTaGTCTCACCTAAGGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLNYGSVSADKRYLSTFPSCPLC*SHLRPQ Trigger: CTGAGGCCTTAGGTGAGACAAGCACAGAGGACAGCT...TGGGAAGGTAGAGAGATAGCGCTTATCTGCGCTCACAGATCCATAGTTAAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR TCA 72 bp | CCTCCTGTGCAGGTTCTGACCTTAACTATGGATCTGTaGGCGCAGATAAGCGCTATCTCTCTACCTTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PPVQVLTLTMDL*AQISAISLPSH Trigger: GTGGGAAGGTAGAGAGATAGCGCTTATCTGCGCTCACAGATCCATAGTTAAGGTCAGAACCTGCACAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR GCA 72 bp | AGGGATGCGGAATTGTATGTGCTTTTGCTGTATGGTTaGATGCGCACATCCACAGGGAGAGGGAAGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: RDAELYVLLLYG*MRTSTGRGKDR Trigger: TCTGTCCTTCCCTCTCCCTGTGGATGTGCGCATGCAACCATACAGCAAAAGCACATACAATTCCGCATCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CCA 72 bp | ACTAGAGAAGGGGAGAGAATGACCACTGCTGAACGATaGAAGAAAATGGGAACTGAGACCAAGGCAGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TREGERMTTAER*KKMGTETKAGP Trigger: AGGCCCTGCCTTGGTCTCAGTTCCCATTTTCTTCCATCGTTCAGCAGTGGTCATTCTCTCCCCTTCTCTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAAGGAAGGTTTCAAGTGGCAGAAGACAGCCCAGGTATCCTGGGCAAGGGCTTCTTCGCTTGCATATTaGGTCAGTGTTTGTAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: DKEGFKWQKTAQVSWARASSLAY*VSVCSA Trigger: TGCACTACAAACACTGACCAAATATGCAAGCGAAGA...AGCCCTTGCCCAGGATACCTGGGCTGTCTTCTGCCACTTGAAACCTTCCTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR TCA 72 bp | GAGCTCAGTGGAAGCTCACTAGAGAAGGGGAGAGAATaGCCACTGCTGAACGATGGAAGAAAATGGGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: ELSGSSLEKGRE*PLLNDGRKWEL Trigger: CAGTTCCCATTTTCTTCCATCGTTCAGCAGTGGTCATTCTCTCCCCTTCTCTAGTGAGCTTCCACTGAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR GCA 72 bp | CACGGGCCACAAGCATATTTAGAGCCTGTATGCTTATaGAAAGCACACTCTGACCTAGGCTTAGGGGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HGPQAYLEPVCL*KAHSDLGLGVL Trigger: CAGAACCCCTAAGCCTAGGTCAGAGTGTGCTTTGCATAAGCATACAGGCTCTAAATATGCTTGTGGCCCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR TCA 72 bp | CTTGAGTCCTCTGGACACAAACGTGTAACTCCTGAGTaGAGTTTAACCATTGCCTCCAACACGGCAGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LESSGHKRVTPE*SLTIASNTAAC Trigger: ACAAGCTGCCGTGTTGGAGGCAATGGTTAAACTTCACTCAGGAGTTACACGTTTGTGTCCAGAGGACTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR TCA 72 bp | CTGTACAGTCAAGGCTGCTGTACAGGCAGTCAAGGCTaGGGCCATTCTAACACTTGCAATTTAGAGACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LYSQGCCTGSQG*GHSNTCNLETE Trigger: CTCAGTCTCTAAATTGCAAGTGTTAGAATGGCCTCAGCCTTGACTGCCTGTACAGCAGCCTTGACTGTACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR TCA 72 bp | TCTGCTGCAGTTATTTCACAACTTTGTAGGGCATCATaGCAGGCTCTTCCGGCCAGGAAGAGTTCTCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SAAVISQLCRAS*QALPARKSSLD Trigger: GTCTAGAGAACTCTTCCTGGCCGGAAGAGCCTGTCATGATGCCCTACAAAGTTGTGAAATAACTGCAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CCA 72 bp | GCTTCTACCAAGAGCAGCTTGGCCAAGGTACCTATTTaGACAAATCAGATTGACAGCACACCACAGCTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ASTKSSLAKVPI*TNQIDSTPQLG Trigger: ACCTAGCTGTGGTGTGCTGTCAATCTGATTTGTCCAAATAGGTACCTTGGCCAAGCTGCTCTTGGTAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CCA 72 bp | TTCACCGTGGCTGGCAAGCTTCTACCAAGAGCAGCTTaGCCAAGGTACCTATTTGGACAAATCAGATTGACA | + |
|
Preference number: 3 (lower is better) Translates to: FTVAGKLLPRAA*PRYLFGQIRLT Trigger: TGTCAATCTGATTTGTCCAAATAGGTACCTTGGCCAAGCTGCTCTTGGTAGAAGCTTGCCAGCCACGGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CCA 72 bp | TCCTTAACAGCATTTCCCCCACCTCTGTGTCTAGCTTaGAAACTCCAGGAGCTTGAGTCTGAAAATGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SLTAFPPPLCLA*KLQELESENEV Trigger: AACCTCATTTTCAGACTCAAGCTCCTGGAGTTTCCAAGCTAGACACAGAGGTGGGGGAAATGCTGTTAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGCATTCCTGTTCCAACTTGGGTCAACCAGCAACTGCTAACCTCAAGCACATCTTCGCTTGCATATTaGGTCAGTGTTTGTAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ESIPVPTWVNQQLLTSSTSSLAY*VSVCSA Trigger: TGCACTACAAACACTGACCAAATATGCAAGCGAAGA...TGTGCTTGAGGTTAGCAGTTGCTGGTTGACCCAAGTTGGAACAGGAATGCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGCATTCCTGTTCCAACTTGGGTCAACCAGCAACTGCTAACCTCAAGCACAACAAAGCTCTTCGCTaGCATATTTGGTCAGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RKHSCSNLGQPATANLKHNKALR*HIWSVF Trigger: AAACACTGACCAAATATGCAAGCGAAGAGCTTTGTT...GTGCTTGAGGTTAGCAGTTGCTGGTTGACCCAAGTTGGAACAGGAATGCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGTCTCCGGAGGTCCTCCTCGGCGTCAGACTCCTCCATCTCGTCGTCAGCTTGCCGAAACTGTGCATaGGCGCGCCGCTCTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLRRSSSASDSSISSSACRNCA*ARRSHS Trigger: GCTGTGAGAGCGGCGCGCTCATGCACAGTTTCGGCA...AGCTGACGACGAGATGGAGGAGTCTGACGCCGAGGAGGACCTCCGGAGACCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227246.2 ENSMUST00000228066.2 |
||
| CDS-3UTR TCA 90 bp | CCCCAGGACTGTCACCCGCAGCGTGGGAATGTGTCATACAGGCAGCCCGAAGCGAGCGCATCAATGTGCTaGAGGCCACGACGCCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQDCHPQRGNVSYRQPEASASMC*RPRRRA Trigger: TGCTCGGCGTCGTGGCCTTCAGCACATTGATGCGCT...CGCTTCGGGCTGCCTGTATGACACATTCCCACGCTGCGGGTGACAGTCCTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228066.2 |
||
| 3UTR CAA 72 bp | TCCAGTGAGACAGTGCACCACGGTGACAGAAAGGCCTaGTCGGCCACCGGAGGCTCTCCCAAGGGATGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSETVHHGDRKA*SATGGSPKGCG Trigger: TCCGCATCCCTTGGGAGAGCCTCCGGTGGCCGACAAGGCCTTTCTGTCACCGTGGTGCACTGTCTCACTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CAA 72 bp | AGGCTTAGGGGTTCTGAGGAGAGCTGTCCTCTGTGCTaGTCTCACCTAAGGCCTCAGCCCGTGAGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLRGSEESCPLC*SHLRPQPVRRW Trigger: CCACCGCCTCACGGGCTGAGGCCTTAGGTGAGACAAGCACAGAGGACAGCTCTCCTCAGAACCCCTAAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTCGGCGTCAGACTCCTCCATCTCGTCGTCAGCTGAGATCAGGATCTCATGCCGAAACTGTGCATaGGCGCGCCGCTCTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSASDSSISSSAEIRISCRNCA*ARRSHS Trigger: GCTGTGAGAGCGGCGCGCTCATGCACAGTTTCGGCA...TGAGATCCTGATCTCAGCTGACGACGAGATGGAGGAGTCTGACGCCGAGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227246.2 ENSMUST00000228066.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTCTGTCTGTCCCCACACTGGAGCAGCTGCCTCCTGTGCAGGTTCTGACCAAGATGCCGAAACTGTaGATGAGCGCGCCGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RALSVPTLEQLPPVQVLTKMPKL*MSAPLS Trigger: TGAGAGCGGCGCGCTCATGCACAGTTTCGGCATCTT...GGTCAGAACCTGCACAGGAGGCAGCTGCTCCAGTGTGGGGACAGACAGAGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| CDS-3UTR GCA 90 bp | GGGTGCAGAAGGAACTTGCACTCACTTGCTTCCTGTCCTCCAGGCCCTGTGCCTACGCCGAGCAGCCCCTaGAGGAAGATGCCGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GCRRNLHSLASCPPGPVPTPSSP*RKMPKL Trigger: CAGTTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGT...AGGCACAGGGCCTGGAGGACAGGAAGCAAGTGAGTGCAAGTTCCTTCTGCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| CDS-3UTR GCA 90 bp | TTCACAGGTCTCCGGAGGTCCTCCTCGGCGTCAGACTCCTCCATCTCGTCGTCAAAGATGCCGAAACTGTaGATGAGCGCGCCGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FTGLRRSSSASDSSISSSKMPKL*MSAPLS Trigger: TGAGAGCGGCGCGCTCATGCACAGTTTCGGCATCTT...TGACGACGAGATGGAGGAGTCTGACGCCGAGGAGGACCTCCGGAGACCTGTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227246.2 ENSMUST00000228066.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGGAACTTGCACTCACTTGCTTCCTGTCCTCCAGGCCCTGTGCCTGGGAGCAAGATGCCGAAACTGTaGATGAGCGCGCCGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRNLHSLASCPPGPVPGSKMPKL*MSAPLS Trigger: TGAGAGCGGCGCGCTCATGCACAGTTTCGGCATCTT...GCTCCCAGGCACAGGGCCTGGAGGACAGGAAGCAAGTGAGTGCAAGTTCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CAA 72 bp | AAGCAGGTGGCAGCTGGTGACAGACCAGGGCAAAGGTaGGCTCTGCAAGCTGCTGTACAGTCAAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQVAAGDRPGQR*ALQAAVQSRLL Trigger: CAGCAGCCTTGACTGTACAGCAGCTTGCAGAGCCAACCTTTGCCCTGGTCTGTCACCAGCTGCCACCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| 3UTR CAA 72 bp | AGCGGAAATCAGGGTGCAGAAGGAACTTGCACTCACTaGCTTCCTGTCCTCCAGGCCCTGTGCCTGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGNQGAEGTCTH*LPVLQALCLGA Trigger: AGCTCCCAGGCACAGGGCCTGGAGGACAGGAAGCAAGTGAGTGCAAGTTCCTTCTGCACCCTGATTTCCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGTGGCAGAAGACAGCCCAGGTATCCTGGGCAAGGGCTAGGGTCACGGGCCCCATTCCTTGAGTCCTaGTTGGCTCCTCTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGRRQPRYPGQGLGSRAPFLES*LAPLSS Trigger: AGAAGAAAGAGGAGCCAACCAGGACTCAAGGAATGG...GGCCCGTGACCCTAGCCCTTGCCCAGGATACCTGGGCTGTCTTCTGCCACTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCCAAGGGATGCGGAATTGTATGTGCTTTTGCTGTATGGTTGCATGCGCATGCCGAAACTGTGCATaGGCGCGCCGCTCTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSQGMRNCMCFCCMVACACRNCA*ARRSHS Trigger: GCTGTGAGAGCGGCGCGCTCATGCACAGTTTCGGCA...TGCGCATGCAACCATACAGCAAAAGCACATACAATTCCGCATCCCTTGGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGACCTCCTCTCCTACTGAGCCAACTCCACAGCTGCAGCCCAGAGACGACACACGGCCGTCTTTCATaGTTTGGTTCTCTGAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VGPPLLLSQLHSCSPETTHGRLS*FGSLKR Trigger: ACGCTTCAGAGAACCAAAGCATGAAAGACGGCCGTG...TGTCGTCTCTGGGCTGCAGCTGTGGAGTTGGCTCAGTAGGAGAGGAGGTCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTGTATGGTTGCATGCGCACATCCACAGGGAGAGGGAAGGACAGACACACAACCCAGGCCCCGCACTaGAGAGGGTCTCCATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLYGCMRTSTGRGKDRHTTQAPH*RGSPYS Trigger: AGAATATGGAGACCCTCTGCAGTGCGGGGCCTGGGT...TGTGTGTCTGTCCTTCCCTCTCCCTGTGGATGTGCGCATGCAACCATACAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
||
| CDS-3UTR TCA 90 bp | GATGGAAGAAAATGGGAACTGAGACCAAGGCAGGGCCTGGCGGACCCGTTCCAGAAGGGTCCTCTTCAGTaGGATCTGCTAGGTACACAT | + |
|
Preference number: 4 (lower is better) Translates to: DGRKWELRPRQGLADPFQKGPLQ*DLLGTH Trigger: ATGTGTACCTAGCAGATCTCACTGAAGAGGACCCTT...CTGGAACGGGTCCGCCAGGCCCTGCCTTGGTCTCAGTTCCCATTTTCTTCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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| CDS-3UTR TCA 90 bp | CCTTCTGTCTGTGACAAGGAAGGTTTCAAGTGGCAGAAGACAGCCCAGGTATCCAGGGGACTATCAGCATaGCGATGGCCAGCTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PSVCDKEGFKWQKTAQVSRGLSA*RWPASG Trigger: ACCTGAAGCTGGCCATCGTCATGCTGATAGTCCCCT...GGATACCTGGGCTGTCTTCTGCCACTTGAAACCTTCCTTGTCACAGACAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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| CDS-3UTR GCA 90 bp | CTCATACAACCTACACATTCAAACACGACTCACACCAGTGTCTGCTCTGCTGCAACGCCGAGCAGCCCCTaGAGGAAGATGCCGAAACTG | + |
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Preference number: 4 (lower is better) Translates to: LIQPTHSNTTHTSVCSAATPSSP*RKMPKL Trigger: CAGTTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGT...TGCAGCAGAGCAGACACTGGTGTGAGTCGTGTTTGAATGTGTAGGTTGTATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| CDS-3UTR GCA 90 bp | GACAAGGAAGGTTTCAAGTGGCAGAAGACAGCCCAGGTATCCTGGGCAAGGGCTCACGGCCGTCTTTCATaGTTTGGTTCTCTGAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: DKEGFKWQKTAQVSWARAHGRLS*FGSLKR Trigger: ACGCTTCAGAGAACCAAAGCATGAAAGACGGCCGTG...AGCCCTTGCCCAGGATACCTGGGCTGTCTTCTGCCACTTGAAACCTTCCTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| CDS-3UTR CCA 90 bp | CATACAGGCAGCCCGAAGCGGTGCTTCTTTTTCACAGGTCTCCGGAGGTCCTCCCCGTCTTTCATGCTTTaGTTCTCTGAAGCGTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: HTGSPKRCFFFTGLRRSSPSFML*FSEAFK Trigger: CTTAAACGCTTCAGAGAACCAAAGCATGAAAGACGG...GGAGGACCTCCGGAGACCTGTGAAAAAGAAGCACCGCTTCGGGCTGCCTGTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGTATGGTTGCATGCGCACATCCACAGGGAGAGGGAAGGACAGACACACAGCCACCTTTTTCCACTaGAGTATGAGGAGGACGATG | + |
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Preference number: 4 (lower is better) Translates to: LLYGCMRTSTGRGKDRHTATFFH*SMRRTM Trigger: CATCGTCCTCCTCATACTCCAGTGGAAAAAGGTGGC...TGTGTGTCTGTCCTTCCCTCTCCCTGTGGATGTGCGCATGCAACCATACAGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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| 3UTR CAA 72 bp | AAGGGATGCGGAATTGTATGTGCTTTTGCTGTATGGTaGCATGCGCACATCCACAGGGAGAGGGAAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: KGCGIVCAFAVW*HAHIHREREGQ Trigger: CTGTCCTTCCCTCTCCCTGTGGATGTGCGCATGCAACCATACAGCAAAAGCACATACAATTCCGCATCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGCATTCCTGTTCCAACTTGGGTCAACCAGCAACTGCTAACCTCAAGCACGTACGCCCACATAAATaGGCAGCATGCCTACAGTGG | + |
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Preference number: 4 (lower is better) Translates to: RKHSCSNLGQPATANLKHVRPHK*AACLQW Trigger: CCACTGTAGGCATGCTGCTCATTTATGTGGGCGTAC...GTGCTTGAGGTTAGCAGTTGCTGGTTGACCCAAGTTGGAACAGGAATGCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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| 3UTR CAA 72 bp | CTTCACCGTGGCTGGCAAGCTTCTACCAAGAGCAGCTaGGCCAAGGTACCTATTTGGACAAATCAGATTGAC | + |
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Preference number: 4 (lower is better) Translates to: LHRGWQASTKSS*AKVPIWTNQID Trigger: GTCAATCTGATTTGTCCAAATAGGTACCTTGGCCAAGCTGCTCTTGGTAGAAGCTTGCCAGCCACGGTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTGTCTGTGACAAGGAAGGTTTCAAGTGGCAGAAGACAGCCCAGGTATCCACTTTTCAAAGATCATaGTCACGATGTAGAGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PSVCDKEGFKWQKTAQVSTFQRS*SRCRGR Trigger: GCGCCCTCTACATCGTGATCATGATCTTTGAAAAGT...GGATACCTGGGCTGTCTTCTGCCACTTGAAACCTTCCTTGTCACAGACAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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| CDS-3UTR CCA 90 bp | GTGAGCGCAGATAAGCGCTATCTCTCTACCTTCCCACCAGGGCCGTTTATCTCACCGTCTTTCATGCTTTaGTTCTCTGAAGCGTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: VSADKRYLSTFPPGPFISPSFML*FSEAFK Trigger: CTTAAACGCTTCAGAGAACCAAAGCATGAAAGACGG...TGAGATAAACGGCCCTGGTGGGAAGGTAGAGAGATAGCGCTTATCTGCGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 |
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| CDS-3UTR TCA 90 bp | ACGACTCACACCAGTGTCTGCTCTGCTGCAGTTATTTCACAACTTTGTAGGGCAGTTGATGAGGTACAGTaGACAAGGGTCCTCTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: TTHTSVCSAAVISQLCRAVDEVQ*TRVLFS Trigger: ACTGAAGAGGACCCTTGTTCACTGTACCTCATCAAC...TGCCCTACAAAGTTGTGAAATAACTGCAGCAGAGCAGACACTGGTGTGAGTCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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| CDS-3UTR TCA 90 bp | AGAAAGCATTCCTGTTCCAACTTGGGTCAACCAGCAACTGCTAACCTCAAGCACCATTTGCAAAGTGGATaGAGAGCATCCCTATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RKHSCSNLGQPATANLKHHLQSG*RASLWL Trigger: AAGCCATAGGGATGCTCTTCATCCACTTTGCAAATG...GTGCTTGAGGTTAGCAGTTGCTGGTTGACCCAAGTTGGAACAGGAATGCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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| CDS-3UTR CCA 90 bp | TTAAGAAAGCATTCCTGTTCCAACTTGGGTCAACCAGCAACTGCTAACCTCAAGTCCCTATGGCTTGTTTaGAAGTGTCTAAAAACCATA | + |
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Preference number: 4 (lower is better) Translates to: LRKHSCSNLGQPATANLKSLWLV*KCLKTI Trigger: TATGGTTTTTAGACACTTCCAAACAAGCCATAGGGA...CTTGAGGTTAGCAGTTGCTGGTTGACCCAAGTTGGAACAGGAATGCTTTCTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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| CDS TCA 90 bp | CCACGACGCCGAGCAGCCCCTGCAGGAAGATGCCGAAACTGTGCATaGGCGCGCCGCTCTCACAGCGGCCCGCCCCGGACGCGACCGTGG | + |
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Preference number: 5 (lower is better) Translates to: PRRRAAPAGRCRNCA*ARRSHSGPPRTRPW Trigger: CCACGGTCGCGTCCGGGGCGGGCCGCTGTGAGAGCGGCGCGCTCATGCACAGTTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGTCGTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 ENSMUST00000228066.2 |
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| CDS GCA 90 bp | AAGGCCACGACGCCGAGCAGCCCCTGCAGGAAGATGCCGAAACTGTaGATGAGCGCGCCGCTCTCACAGCGGCCCGCCCCGGACGCGACC | + |
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Preference number: 5 (lower is better) Translates to: KATTPSSPCRKMPKL*MSAPLSQRPAPDAT Trigger: GGTCGCGTCCGGGGCGGGCCGCTGTGAGAGCGGCGCGCTCATGCACAGTTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGTCGTGGCCTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 ENSMUST00000228066.2 |
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| CDS-3UTR CAA 90 bp | GATGCGGAATTGTATGTGCTTTTGCTGTATGGTTGCATGCGCACATCCACAGGGCCTTGCTCCCATTCCTaGAGTCCTGGTTGGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: DAELYVLLLYGCMRTSTGPCSHS*SPGWLL Trigger: GAGGAGCCAACCAGGACTCAAGGAATGGGAGCAAGG...CCCTGTGGATGTGCGCATGCAACCATACAGCAAAAGCACATACAATTCCGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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| CDS CCA 90 bp | CTTCCATCTTCCAGCACATATCCTCCACGGCCGTCTTTCATGCTTTaGTTCTCTGAAGCGTTTAAGCATCAATGTGCTGAAGGCCACGAC | + |
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Preference number: 5 (lower is better) Translates to: LPSSSTYPPRPSFML*FSEAFKHQCAEGHD Trigger: GTCGTGGCCTTCAGCACATTGATGCTTAAACGCTTCAGAGAACCAAAGCATGAAAGACGGCCGTGGAGGATATGTGCTGGAAGATGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
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| CDS-3UTR CAA 90 bp | GCGTGGGAATGTGTCATACAGGCAGCCCGAAGCGGTGCTTCTTTTTCACAGGTCTTTCTCATGAGGAAATaGTCCACTACCCAGAACATG | + |
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Preference number: 5 (lower is better) Translates to: AWECVIQAARSGASFSQVFLMRK*STTQNM Trigger: CATGTTCTGGGTAGTGGACAATTTCCTCATGAGAAA...GACCTGTGAAAAAGAAGCACCGCTTCGGGCTGCCTGTATGACACATTCCCACGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228066.2 |
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| CDS GCA 90 bp | ATCGTCTTCCATCTTCCAGCACATATCCTCCACGGCCGTCTTTCATaGTTTGGTTCTCTGAAGCGTTTAAGCATCAATGTGCTGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: IVFHLPAHILHGRLS*FGSLKRLSINVLKA Trigger: GGCCTTCAGCACATTGATGCTTAAACGCTTCAGAGAACCAAAGCATGAAAGACGGCCGTGGAGGATATGTGCTGGAAGATGGAAGACGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
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| CDS-3UTR CAA 90 bp | CATACAACCTACACATTCAAACACGACTCACACCAGTGTCTGCTCTGCTGCAGTGGTCGGGGTTTTCAATaGGATTCAATAGGGCCACCT | + |
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Preference number: 5 (lower is better) Translates to: HTTYTFKHDSHQCLLCCSGRGFQ*DSIGPP Trigger: AGGTGGCCCTATTGAATCCAATTGAAAACCCCGACC...ACTGCAGCAGAGCAGACACTGGTGTGAGTCGTGTTTGAATGTGTAGGTTGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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| CDS GCA 90 bp | TGTTTGGAAGTGTCTAAAAACCATATCCTCCACGGCCGTCTTTCATaGTTTGGTTCTCTGAAGCGTTTAAGCATCAATGTGCTGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: CLEVSKNHILHGRLS*FGSLKRLSINVLKA Trigger: GGCCTTCAGCACATTGATGCTTAAACGCTTCAGAGAACCAAAGCATGAAAGACGGCCGTGGAGGATATGGTTTTTAGACACTTCCAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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| CDS-3UTR CAA 90 bp | AGCAGCTTGGCCAAGGTACCTATTTGGACAAATCAGATTGACAGCACACCACAGTTTCTCATGAGGAAATaGTCCACTACCCAGAACATG | + |
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Preference number: 5 (lower is better) Translates to: SSLAKVPIWTNQIDSTPQFLMRK*STTQNM Trigger: CATGTTCTGGGTAGTGGACAATTTCCTCATGAGAAA...CTGTGGTGTGCTGTCAATCTGATTTGTCCAAATAGGTACCTTGGCCAAGCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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| CDS-3UTR CAA 90 bp | TTAAGAAAGCATTCCTGTTCCAACTTGGGTCAACCAGCAACTGCTAACCTCAAGGCGTCCAGAAGAAAGTaGATGAGGTACAGTGAACAA | + |
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Preference number: 5 (lower is better) Translates to: LRKHSCSNLGQPATANLKASRRK*MRYSEQ Trigger: TTGTTCACTGTACCTCATCAACTTTCTTCTGGACGC...CTTGAGGTTAGCAGTTGCTGGTTGACCCAAGTTGGAACAGGAATGCTTTCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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| CDS CCA 72 bp | CGCCGCTCTCACAGCGGCCCGCCCCGGACGCGACCGTaGAGGCCGGCCCGCTCGGCAATCCGCGGCTCACGT | + |
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Preference number: 6 (lower is better) Translates to: RRSHSGPPRTRP*RPARSAIRGSR Trigger: ACGTGAGCCGCGGATTGCCGAGCGGGCCGGCCTCCACGGTCGCGTCCGGGGCGGGCCGCTGTGAGAGCGGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 ENSMUST00000228066.2 |
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| CDS GCA 72 bp | ACGCCGAGCAGCCCCTGCAGGAAGATGCCGAAACTGTaGATGAGCGCGCCGCTCTCACAGCGGCCCGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: TPSSPCRKMPKL*MSAPLSQRPAP Trigger: CGGGGCGGGCCGCTGTGAGAGCGGCGCGCTCATGCACAGTTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 ENSMUST00000228066.2 |
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| CDS GCA 72 bp | ATCAATGTGCTGAAGGCCACGACGCCGAGCAGCCCCTaGAGGAAGATGCCGAAACTGTGCATGAGCGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: INVLKATTPSSP*RKMPKLCMSAP Trigger: CGGCGCGCTCATGCACAGTTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGTCGTGGCCTTCAGCACATTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006701.8 ENSMUST00000227246.2 ENSMUST00000228066.2 |
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| CDS TCA 72 bp | GTCCACTACCCAGAACATGAAAGCGCATCAATGTGCTaGAGGCCACGACGCCGAGCAGCCCCTGCAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: VHYPEHESASMC*RPRRRAAPAGR Trigger: TCTTCCTGCAGGGGCTGCTCGGCGTCGTGGCCTTCAGCACATTGATGCGCTTTCATGTTCTGGGTAGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228066.2 |
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| CDS GCA 72 bp | CATCTTCCAGCACATATCCTCCACGGCCGTCTTTCATaGTTTGGTTCTCTGAAGCGTTTAAGCATCAATGTG | + |
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Preference number: 6 (lower is better) Translates to: HLPAHILHGRLS*FGSLKRLSINV Trigger: CACATTGATGCTTAAACGCTTCAGAGAACCAAAGCATGAAAGACGGCCGTGGAGGATATGTGCTGGAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227246.2 |
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| CDS GCA 72 bp | GTGTCTAAAAACCATATCCTCCACGGCCGTCTTTCATaGTTTGGTTCTCTGAAGCGTTTAAGCATCAATGTG | + |
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Preference number: 6 (lower is better) Translates to: VSKNHILHGRLS*FGSLKRLSINV Trigger: CACATTGATGCTTAAACGCTTCAGAGAACCAAAGCATGAAAGACGGCCGTGGAGGATATGGTTTTTAGACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006701.8 |
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