Pregenerated sensors for STIL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028718Ensembl transcript IDs: ENSMUST00000030490.13, ENSMUST00000129957.8, ENSMUST00000141933.8, ENSMUST00000147519.8
Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGCTGGGCTTGTGGAGCAAGAGAGGGCTGCCTCGAGTCCAGTGTaGAAGGTCTCACAGGGTAGTCTTCCTTTTGCATGCTCCCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: VAGLVEQERAASSPV*KVSQGSLPFACSQQ Trigger: CTGCTGGGAGCATGCAAAAGGAAGACTACCCTGTGAGACCTTCCACACTGGACTCGAGGCAGCCCTCTCTTGCTCCACAAGCCCAGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR TCA 90 bp | GTGCATGCACATGGCACAGGGATGTGGCACACACGAGTCCACATGTaGAGGTCCTGCCACAGGAGACGGTTCTCCATTGCTATGGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: VHAHGTGMWHTRVHM*RSCHRRRFSIAMGR Trigger: TCTCCCCATAGCAATGGAGAACCGTCTCCTGTGGCAGGACCTTCACATGTGGACTCGTGTGTGCCACATCCCTGTGCCATGTGCATGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR TCA 90 bp | CTGATTTGTTGGGCCCCTCCGGAAAGGCTCCCCAGTGGTAGCTTCTaGGCTGTGTTTGGCATCACAAAGCTCAGGCTGGGATGGCTTAAT | + |
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Preference number: 1 (lower is better) Translates to: LICWAPPERLPSGSF*AVFGITKLRLGWLN Trigger: ATTAAGCCATCCCAGCCTGAGCTTTGTGATGCCAAACACAGCTCAGAAGCTACCACTGGGGAGCCTTTCCGGAGGGGCCCAACAAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | CCATCATGCCATTGTCTGGTGCTGTATTGGGCATGTGCATGCACATaGCACAGGGATGTGGCACACACGAGTCCACATGTGAAGGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PSCHCLVLYWACACT*HRDVAHTSPHVKVL Trigger: CAGGACCTTCACATGTGGACTCGTGTGTGCCACATCCCTGTGCCATGTGCATGCACATGCCCAATACAGCACCAGACAATGGCATGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | ACAGTCCCATCATGCCATTGTCTGGTGCTGTATTGGGCATGTGCATaGACATGGCACAGGGATGTGGCACACACGAGTCCACATGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: TVPSCHCLVLYWACA*TWHRDVAHTSPHVK Trigger: CTTCACATGTGGACTCGTGTGTGCCACATCCCTGTGCCATGTGCATGCACATGCCCAATACAGCACCAGACAATGGCATGATGGGACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | ATGCATCAGGAGACAGTCCCATCATGCCATTGTCTGGTGCTGTATTaGGCATGTGCATGCACATGGCACAGGGATGTGGCACACACGAGT | + |
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Preference number: 1 (lower is better) Translates to: MHQETVPSCHCLVLY*ACACTWHRDVAHTS Trigger: ACTCGTGTGTGCCACATCCCTGTGCCATGTGCATGCACATGCCCAATACAGCACCAGACAATGGCATGATGGGACTGTCTCCTGATGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | AAAACGGTATGCATCAGGAGACAGTCCCATCATGCCATTGTCTGGTaGTGTATTGGGCATGTGCATGCACATGGCACAGGGATGTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: KTVCIRRQSHHAIVW*CIGHVHAHGTGMWH Trigger: GTGCCACATCCCTGTGCCATGTGCATGCACATGCCCAATACAGCACCAGACAATGGCATGATGGGACTGTCTCCTGATGCATACCGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | AGGCGAAGACTGTGCTTCCATGGAAACCAGCTCCATTTGTTTTGCTaGTTTCACGGTGTCTTCCACGGTGGCTACTGTCTTATGGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: RRRLCFHGNQLHLFC*FHGVFHGGYCLMGA Trigger: GGCTCCCATAAGACAGTAGCCACCGTGGAAGACACCGTGAAAGCAGCAAAACAAATGGAGCTGGTTTCCATGGAAGCACAGTCTTCGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | GCCAGGCGAAGACTGTGCTTCCATGGAAACCAGCTCCATTTGTTTTaGTGCTTTCACGGTGTCTTCCACGGTGGCTACTGTCTTATGGGA | + |
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Preference number: 1 (lower is better) Translates to: ARRRLCFHGNQLHLF*CFHGVFHGGYCLMG Trigger: TCCCATAAGACAGTAGCCACCGTGGAAGACACCGTGAAAGCAGCAAAACAAATGGAGCTGGTTTCCATGGAAGCACAGTCTTCGCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | TCTGCATGCTGGGTTTCTGTTCAACACATGGTCGCTCTCACTATCTaGGTGGCTGGGAGGCTCCTCTTCATCCTCACTATTGTCACTGCT | + |
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Preference number: 1 (lower is better) Translates to: SACWVSVQHMVALTI*VAGRLLFILTIVTA Trigger: AGCAGTGACAATAGTGAGGATGAAGAGGAGCCTCCCAGCCACGCAGATAGTGAGAGCGACCATGTGTTGAACAGAAACCCAGCATGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | GACAAAACGGTATGCATCAGGAGACAGTCCCATCATGCCATTGTCTaGTGCTGTATTGGGCATGTGCATGCACATGGCACAGGGATGTGG | + |
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Preference number: 1 (lower is better) Translates to: DKTVCIRRQSHHAIV*CCIGHVHAHGTGMW Trigger: CCACATCCCTGTGCCATGTGCATGCACATGCCCAATACAGCACCAGACAATGGCATGATGGGACTGTCTCCTGATGCATACCGTTTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR TCA 90 bp | GCTGGATCTGTGCCTGAAGTAGTCTCAGCTGCCTGTCTTGCTCTGTaGCAAAACGGTATGCATCAGGAGACAGTCCCATCATGCCATTGT | + |
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Preference number: 1 (lower is better) Translates to: AGSVPEVVSAACLAL*QNGMHQETVPSCHC Trigger: ACAATGGCATGATGGGACTGTCTCCTGATGCATACCGTTTTGTCACAGAGCAAGACAGGCAGCTGAGACTACTTCAGGCACAGATCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | CAGTGCTGTTACTGGCTCCCTCTGTTGGCGCAGTCTGTAAGCACATaGTCACACTTTCAGCCAGCAATGCATTTGGGAAGAACACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: QCCYWLPLLAQSVST*SHFQPAMHLGRTQE Trigger: TTCCTGTGTTCTTCCCAAATGCATTGCTGGCTGAAAGTGTGAGCATGTGCTTACAGACTGCGCCAACAGAGGGAGCCAGTAACAGCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | CATGCTGGGTTTCTGTTCAACACATGGTCGCTCTCACTATCTGCGTaGCTGGGAGGCTCCTCTTCATCCTCACTATTGTCACTGCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: HAGFLFNTWSLSLSA*LGGSSSSSLLSLLC Trigger: ACAAAGCAGTGACAATAGTGAGGATGAAGAGGAGCCTCCCAGCCACGCAGATAGTGAGAGCGACCATGTGTTGAACAGAAACCCAGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | CCAAGAAGGCTCTTTCTCATGACCACATTGCACAGGTCTGCATGCTaGGTTTCTGTTCAACACATGGTCGCTCTCACTATCTGCGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: PRRLFLMTTLHRSAC*VSVQHMVALTICVA Trigger: AGCCACGCAGATAGTGAGAGCGACCATGTGTTGAACAGAAACCCAGCATGCAGACCTGTGCAATGTGGTCATGAGAAAGAGCCTTCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | TCGAGTCCAGTGTGGAAGGTCTCACAGGGTAGTCTTCCTTTTGCATaGTCCCAGCAGAAACTGCTTGAAGTTTCTCAGCTACATCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: SSPVWKVSQGSLPFA*SQQKLLEVSQLHQE Trigger: CTCCTGATGTAGCTGAGAAACTTCAAGCAGTTTCTGCTGGGAGCATGCAAAAGGAAGACTACCCTGTGAGACCTTCCACACTGGACTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | GCTGGTTTTCACTTAAGTACTTCAGAGCAATGGCATTGGCCTCCATaGTCAGATCCACACCAGTGGGACTTAGGCTGCTCATGCCAACAT | + |
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Preference number: 1 (lower is better) Translates to: AGFHLSTSEQWHWPP*SDPHQWDLGCSCQH Trigger: ATGTTGGCATGAGCAGCCTAAGTCCCACTGGTGTGGATCTGAGCATGGAGGCCAATGCCATTGCTCTGAAGTACTTAAGTGAAAACCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | ATGCTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTaGGTCAACCACCCCCAACCCCCAGCCAATGTTAATTTGCTACTA | + |
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Preference number: 1 (lower is better) Translates to: MLNKPSLPTKKPPHN*VNHPQPPANVNLLL Trigger: TAGTAGCAAATTAACATTGGCTGGGGGTTGGGGGTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | ACTTCAGAGCAATGGCATTGGCCTCCATGCTCAGATCCACACCAGTaGGACTTAGGCTGCTCATGCCAACATTACCAAACGACATGTAGT | + |
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Preference number: 1 (lower is better) Translates to: TSEQWHWPPCSDPHQ*DLGCSCQHYQTTCS Trigger: ACTACATGTCGTTTGGTAATGTTGGCATGAGCAGCCTAAGTCCCACTGGTGTGGATCTGAGCATGGAGGCCAATGCCATTGCTCTGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | CTGGGTTTCTGTTCAACACATGGTCGCTCTCACTATCTGCGTGGCTaGGAGGCTCCTCTTCATCCTCACTATTGTCACTGCTTTGTAAGA | + |
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Preference number: 1 (lower is better) Translates to: LGFCSTHGRSHYLRG*EAPLHPHYCHCFVR Trigger: TCTTACAAAGCAGTGACAATAGTGAGGATGAAGAGGAGCCTCCCAGCCACGCAGATAGTGAGAGCGACCATGTGTTGAACAGAAACCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | AAGCTAGCACCTGTGCTCACAGCAATGCTTACACTTTTTCTCATGTaGAAGCCAGGCGAAGACTGTGCTTCCATGGAAACCAGCTCCATT | + |
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Preference number: 1 (lower is better) Translates to: KLAPVLTAMLTLFLM*KPGEDCASMETSSI Trigger: AATGGAGCTGGTTTCCATGGAAGCACAGTCTTCGCCTGGCTTGCACATGAGAAAAAGTGTAAGCATTGCTGTGAGCACAGGTGCTAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | ATTCCAAGAAGGCTCTTTCTCATGACCACATTGCACAGGTCTGCATaGTGGGTTTCTGTTCAACACATGGTCGCTCTCACTATCTGCGTG | + |
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Preference number: 1 (lower is better) Translates to: IPRRLFLMTTLHRSA*WVSVQHMVALTICV Trigger: CACGCAGATAGTGAGAGCGACCATGTGTTGAACAGAAACCCAGCATGCAGACCTGTGCAATGTGGTCATGAGAAAGAGCCTTCTTGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | AGGCATTCCAAGAAGGCTCTTTCTCATGACCACATTGCACAGGTCTaGATGCTGGGTTTCTGTTCAACACATGGTCGCTCTCACTATCTG | + |
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Preference number: 1 (lower is better) Translates to: RHSKKALSHDHIAQV*MLGFCSTHGRSHYL Trigger: CAGATAGTGAGAGCGACCATGTGTTGAACAGAAACCCAGCATGCAGACCTGTGCAATGTGGTCATGAGAAAGAGCCTTCTTGGAATGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR TCA 90 bp | TGCATTTGGGAAGAACACAGGAACACCAGGTTCTTTGCTCTGCTCTaGAGAGCTGTTGGATTCAGGAAGTGGCTGATTAACTTCCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: CIWEEHRNTRFFALL*RAVGFRKWLINFLH Trigger: GTGGAGGAAGTTAATCAGCCACTTCCTGAATCCAACAGCTCTTCAGAGCAGAGCAAAGAACCTGGTGTTCCTGTGTTCTTCCCAAATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | GATATAGCTCAGTGGTCAGGCTCAGTAATGGAGCCCATTAGCAAATaGAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGC | + |
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Preference number: 1 (lower is better) Translates to: DIAQWSGSVMEPISK*KALGYRETHLNLIS Trigger: GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAATGGGCTCCATTACTGAGCCTGACCACTGAGCTATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | GGAGATGGCACACTGAGAGATGGTTTAGCATTAGTGTTCCTGAACTaGAGACTCTCTTTCTTACAGGTAGATGACTGCTTCCCTCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: GDGTLRDGLALVFLN*RLSFLQVDDCFPLL Trigger: GAGCAGAGGGAAGCAGTCATCTACCTGTAAGAAAGAGAGTCTCCAGTTCAGGAACACTAATGCTAAACCATCTCTCAGTGTGCCATCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | GCTCCCAGCAGAAACTGCTTGAAGTTTCTCAGCTACATCAGGAGATaGCACACTGAGAGATGGTTTAGCATTAGTGTTCCTGAACTGGAG | + |
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Preference number: 1 (lower is better) Translates to: APSRNCLKFLSYIRR*HTERWFSISVPELE Trigger: CTCCAGTTCAGGAACACTAATGCTAAACCATCTCTCAGTGTGCCATCTCCTGATGTAGCTGAGAAACTTCAAGCAGTTTCTGCTGGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | AGCAATGCTTACACTTTTTCTCATGTGCAAGCCAGGCGAAGACTGTaGTTCCATGGAAACCAGCTCCATTTGTTTTGCTGCTTTCACGGT | + |
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Preference number: 1 (lower is better) Translates to: SNAYTFSHVQARRRL*FHGNQLHLFCCFHG Trigger: ACCGTGAAAGCAGCAAAACAAATGGAGCTGGTTTCCATGGAAGCACAGTCTTCGCCTGGCTTGCACATGAGAAAAAGTGTAAGCATTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | TATACTGAATATGGCCATGATGCTGACAACAGCTGCAGACGTTTGTaGGATAGTAGGATGGTAATGAAGGAGTGGGCACTTGAAGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: YTEYGHDADNSCRRL*DSRMVMKEWALEAP Trigger: TGGAGCTTCAAGTGCCCACTCCTTCATTACCATCCTACTATCCCACAAACGTCTGCAGCTGTTGTCAGCATCATGGCCATATTCAGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | TTACACTTTTTCTCATGTGCAAGCCAGGCGAAGACTGTGCTTCCATaGAAACCAGCTCCATTTGTTTTGCTGCTTTCACGGTGTCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: LHFFSCASQAKTVLP*KPAPFVLLLSRCLP Trigger: TGGAAGACACCGTGAAAGCAGCAAAACAAATGGAGCTGGTTTCCATGGAAGCACAGTCTTCGCCTGGCTTGCACATGAGAAAAAGTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | TCACCGTTATTCTGCTTTGACCGAGCAAGAGACAGTTGTGACAGCTaGTTTTCACTTAAGTACTTCAGAGCAATGGCATTGGCCTCCATG | + |
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Preference number: 1 (lower is better) Translates to: SPLFCFDRARDSCDS*FSLKYFRAMALASM Trigger: CATGGAGGCCAATGCCATTGCTCTGAAGTACTTAAGTGAAAACCAGCTGTCACAACTGTCTCTTGCTCGGTCAAAGCAGAATAACGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR TCA 90 bp | ATTCATGTCTTCACTGGAAATCTTGGTATCATCTTGCTTCGGCTGTaGGTCGGGCTCTTGATCATCACCTGCTGCATTCCAAAACAAGCT | + |
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Preference number: 1 (lower is better) Translates to: IHVFTGNLGIILLRL*VGLLIITCCIPKQA Trigger: AGCTTGTTTTGGAATGCAGCAGGTGATGATCAAGAGCCCGACTCACAGCCGAAGCAAGATGATACCAAGATTTCCAGTGAAGACATGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR TCA 90 bp | TACCAAACGACATGTAGTTTAATCCAGAGATCACTGCTTCCGGGCTaGTGCAGGCCAAAACACTGGCATGATCCACTTTCTGTTCATTTT | + |
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Preference number: 1 (lower is better) Translates to: YQTTCSLIQRSLLPG*CRPKHWHDPLSVHF Trigger: AAAATGAACAGAAAGTGGATCATGCCAGTGTTTTGGCCTGCATCAGCCCGGAAGCAGTGATCTCTGGATTAAACTACATGTCGTTTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | TCTGAATTAATATGTAGAAGGCCGACAGAGGAGTCACCGTTATTCTaGTTTGACCGAGCAAGAGACAGTTGTGACAGCTGGTTTTCACTT | + |
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Preference number: 1 (lower is better) Translates to: SELICRRPTEESPLF*FDRARDSCDSWFSL Trigger: AAGTGAAAACCAGCTGTCACAACTGTCTCTTGCTCGGTCAAAGCAGAATAACGGTGACTCCTCTGTCGGCCTTCTACATATTAATTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | AACAGCTGCAGACGTTTGTGGGATAGTAGGATGGTAATGAAGGAGTaGGCACTTGAAGCTCCATTGGTCTTGTTGAATTATGAGTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: NSCRRLWDSRMVMKE*ALEAPLVLLNYELK Trigger: TTTCAACTCATAATTCAACAAGACCAATGGAGCTTCAAGTGCCCACTCCTTCATTACCATCCTACTATCCCACAAACGTCTGCAGCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR GCA 90 bp | AATTTATTGTACTATACTGAATATGGCCATGATGCTGACAACAGCTaGAGACGTTTGTGGGATAGTAGGATGGTAATGAAGGAGTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: NLLYYTEYGHDADNS*RRLWDSRMVMKEWA Trigger: TGCCCACTCCTTCATTACCATCCTACTATCCCACAAACGTCTGCAGCTGTTGTCAGCATCATGGCCATATTCAGTATAGTACAATAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CCA 90 bp | CTTAGAAATCTTCTGACTCACTGGGTGAGGACTAGGAATCGGTCTTaGAGAAAAGTCTTCATCTTCAAGGTCAGTGTCATGCTTATTTAT | + |
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Preference number: 1 (lower is better) Translates to: LRNLLTHWVRTRNRS*RKVFIFKVSVMLIY Trigger: ATAAATAAGCATGACACTGACCTTGAAGATGAAGACTTTTCTCCAAGACCGATTCCTAGTCCTCACCCAGTGAGTCAGAAGATTTCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR TCA 90 bp | ATGCGATATAATTTCATGTATCTATACACAAAAACTGTGAATCAATaGGTACACAGAACACCTCATGGACTGAGGTATAAAGTTCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: MRYNFMYLYTKTVNQ*VHRTPHGLRYKVQC Trigger: GCACTGAACTTTATACCTCAGTCCATGAGGTGTTCTGTGTACTCATTGATTCACAGTTTTTGTGTATAGATACATGAAATTATATCGCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTCCCTGGTCTATGGATTaGGTTCCCGGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: FSAIALCVRYLGSTPALPPWSMD*VPGQPG Trigger: CCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGG...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
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| 3UTR CAA 90 bp | GGGCCCCTCCGGAAAGGCTCCCCAGTGGTAGCTTCTGAGCTGTGTTaGGCATCACAAAGCTCAGGCTGGGATGGCTTAATCAATAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: GPLRKGSPVVASELC*ASQSSGWDGLINKG Trigger: TCCTTTATTGATTAAGCCATCCCAGCCTGAGCTTTGTGATGCCAAACACAGCTCAGAAGCTACCACTGGGGAGCCTTTCCGGAGGGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGATCCACACCAGTGGGACTTAGGCTGCTCATGCCAACATTACCAAACGACACCCTGGTCTATGGATTaGGTTCCCGGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SDPHQWDLGCSCQHYQTTPWSMD*VPGQPG Trigger: CCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGG...TGTCGTTTGGTAATGTTGGCATGAGCAGCCTAAGTCCCACTGGTGTGGATCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR CAA 90 bp | TATGCATCAGGAGACAGTCCCATCATGCCATTGTCTGGTGCTGTATaGGGCATGTGCATGCACATGGCACAGGGATGTGGCACACACGAG | + |
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Preference number: 2 (lower is better) Translates to: YASGDSPIMPLSGAV*GMCMHMAQGCGTHE Trigger: CTCGTGTGTGCCACATCCCTGTGCCATGTGCATGCACATGCCCAATACAGCACCAGACAATGGCATGATGGGACTGTCTCCTGATGCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCCCTCTGTTGGCGCAGTCTGTAAGCACATGCTCACACTTTCAGCCAGCAATTGTGAGTCGGGCTCTTaGTCATCACCTGCTGCATTC | + |
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Preference number: 2 (lower is better) Translates to: APSVGAVCKHMLTLSASNCESGS*SSPAAF Trigger: GAATGCAGCAGGTGATGATCAAGAGCCCGACTCACA...ATTGCTGGCTGAAAGTGTGAGCATGTGCTTACAGACTGCGCCAACAGAGGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTGCTTTCACGGTGTCTTCCACGGTGGCTACTGTCTTATGGGAGCCAGGAGCACCCATGCCTCCTTaGTTCATGCTAACAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: FAAFTVSSTVATVLWEPGAPMPP*FMLTGL Trigger: TAGCCCTGTTAGCATGAAGCAAGGAGGCATGGGTGC...TCCTGGCTCCCATAAGACAGTAGCCACCGTGGAAGACACCGTGAAAGCAGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGGTACTGGCACATCTGTaGGTGTGTCCGCAGAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: KFSAIALCVRYLGSTPALVLAHL*VCPQSH Trigger: GTGGCTCTGCGGACACACGCACAGATGTGCCAGTAC...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGGAAGGCAGAGGTAGGTaGATCTCTGTGAGTTCGAGG | + |
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Preference number: 2 (lower is better) Translates to: KALGYRETHLNLISCGTWEGRGR*ISVSSR Trigger: CCTCGAACTCACAGAGATCCACCTACCTCTGCCTTC...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCGGCTGTGAGTCGGGCTCTTGATCATCACCTGCTGCATTCCAAAACAAGCGAAGGCAGAGGTAGGTaGATCTCTGTGAGTTCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: ASAVSRALDHHLLHSKTSEGRGR*ISVSSR Trigger: CCTCGAACTCACAGAGATCCACCTACCTCTGCCTTC...GCTTGTTTTGGAATGCAGCAGGTGATGATCAAGAGCCCGACTCACAGCCGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 90 bp | AGCCAGGCGAAGACTGTGCTTCCATGGAAACCAGCTCCATTTGTTTaGCTGCTTTCACGGTGTCTTCCACGGTGGCTACTGTCTTATGGG | + |
|
Preference number: 2 (lower is better) Translates to: SQAKTVLPWKPAPFV*LLSRCLPRWLLSYG Trigger: CCCATAAGACAGTAGCCACCGTGGAAGACACCGTGAAAGCAGCAAAACAAATGGAGCTGGTTTCCATGGAAGCACAGTCTTCGCCTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGACACGAGTCCACATGTaGAGGTCCTGCCACAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KFSAIALCVRYLGSTPALTRVHM*RSCHRR Trigger: TCTCCTGTGGCAGGACCTTCACATGTGGACTCGTGT...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCATTCCAAGAAGGCTCTTTCTCATGACCACATTGCACAGGTCTGCATGCTGGAGCCCATTAGCAAATaGAAGGCCCTGGGGTACAGG | + |
|
Preference number: 2 (lower is better) Translates to: RHSKKALSHDHIAQVCMLEPISK*KALGYR Trigger: CCTGTACCCCAGGGCCTTGCATTTGCTAATGGGCTC...CAGCATGCAGACCTGTGCAATGTGGTCATGAGAAAGAGCCTTCTTGGAATGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCGGCTACCCTGGTCTATaGATTGAGTTCCCGGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: KCKALGYRETHLNLISCGGYPGL*IEFPDS Trigger: GCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCC...GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGATCCACACCAGTGGGACTTAGGCTGCTCATGCCAACATTACCAAACGACAGGCTACCCTGGTCTATaGATTGAGTTCCCGGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: SDPHQWDLGCSCQHYQTTGYPGL*IEFPDS Trigger: GCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCC...TGTCGTTTGGTAATGTTGGCATGAGCAGCCTAAGTCCCACTGGTGTGGATCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 90 bp | CTGCCTCGAGTCCAGTGTGGAAGGTCTCACAGGGTAGTCTTCCTTTaGCATGCTCCCAGCAGAAACTGCTTGAAGTTTCTCAGCTACATC | + |
|
Preference number: 2 (lower is better) Translates to: LPRVQCGRSHRVVFL*HAPSRNCLKFLSYI Trigger: GATGTAGCTGAGAAACTTCAAGCAGTTTCTGCTGGGAGCATGCAAAAGGAAGACTACCCTGTGAGACCTTCCACACTGGACTCGAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 90 bp | TCTGTGACAAAACGGTATGCATCAGGAGACAGTCCCATCATGCCATaGTCTGGTGCTGTATTGGGCATGTGCATGCACATGGCACAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SVTKRYASGDSPIMP*SGAVLGMCMHMAQG Trigger: TCCCTGTGCCATGTGCATGCACATGCCCAATACAGCACCAGACAATGGCATGATGGGACTGTCTCCTGATGCATACCGTTTTGTCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGAAATTCCAAAGGTCATaGCCGCCAGGCAATGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: KALGYRETHLNLISCGTWKFQRS*PPGNDA Trigger: TGCATCATTGCCTGGCGGCCATGACCTTTGGAATTT...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCGGCTGTGAGTCGGGCTCTTGATCATCACCTGCTGCATTCCAAAACAAGCAATCTTCTGACTCACTaGGTGAGGACTAGGAATCGG | + |
|
Preference number: 2 (lower is better) Translates to: ASAVSRALDHHLLHSKTSNLLTH*VRTRNR Trigger: CCGATTCCTAGTCCTCACCCAGTGAGTCAGAAGATT...GCTTGTTTTGGAATGCAGCAGGTGATGATCAAGAGCCCGACTCACAGCCGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGCTTCTGAGCTGTGTTTaGCATCACAAAGCTCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: KALGYRETHLNLISCGTWLLSCV*HHKAQA Trigger: AGCCTGAGCTTTGTGATGCCAAACACAGCTCAGAAG...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGAGATGGCAAGGTTCCGGGAAAAACTGCAATGTCTCTTTCATTTTCCTTCGTGTGGCTGGGCTTGTaGAGCAAGAGAGGGCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SGDGKVPGKTAMSLSFSFVWLGL*SKRGLP Trigger: AGGCAGCCCTCTCTTGCTCCACAAGCCCAGCCACAC...GAAGGAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACCTTGCCATCTCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 90 bp | GCGCAGTCTGTAAGCACATGCTCACACTTTCAGCCAGCAATGCATTaGGGAAGAACACAGGAACACCAGGTTCTTTGCTCTGCTCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AQSVSTCSHFQPAMH*GRTQEHQVLCSALK Trigger: CTTCAGAGCAGAGCAAAGAACCTGGTGTTCCTGTGTTCTTCCCAAATGCATTGCTGGCTGAAAGTGTGAGCATGTGCTTACAGACTGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCGGCTGTGAGTCGGGCTCTTGATCATCACCTGCTGCATTCCAAAACAAGCAAAGAAGGCATGTTTTaGAAGGGACTCAGATCGCAG | + |
|
Preference number: 2 (lower is better) Translates to: ASAVSRALDHHLLHSKTSKEGMF*KGLRSQ Trigger: CTGCGATCTGAGTCCCTTCCAAAACATGCCTTCTTT...GCTTGTTTTGGAATGCAGCAGGTGATGATCAAGAGCCCGACTCACAGCCGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGGAGATGGCAAGGTTCCGGGAAAAACTGCAATGTCTCTTTCATTTTCCTTCGCCAGGCGAAGACTGTaGTTCCATGGAAACCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SGDGKVPGKTAMSLSFSFARRRL*FHGNQL Trigger: GAGCTGGTTTCCATGGAAGCACAGTCTTCGCCTGGC...GAAGGAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACCTTGCCATCTCCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCCCTCTGTTGGCGCAGTCTGTAAGCACATGCTCACACTTTCAGCCAGCAATTTGATCATCACCTGCTaGATTCCAAAACAAGCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: APSVGAVCKHMLTLSASNLIITC*IPKQAS Trigger: GCTAGCTTGTTTTGGAATGCAGCAGGTGATGATCAA...ATTGCTGGCTGAAAGTGTGAGCATGTGCTTACAGACTGCGCCAACAGAGGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCATTCCAAGAAGGCTCTTTCTCATGACCACATTGCACAGGTCTGCATGCTGGAACACCAGGTTCTTTaGTCTGCTCTGAAGAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RHSKKALSHDHIAQVCMLEHQVL*SALKSC Trigger: ACAGCTCTTCAGAGCAGAGCAAAGAACCTGGTGTTC...CAGCATGCAGACCTGTGCAATGTGGTCATGAGAAAGAGCCTTCTTGGAATGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 90 bp | AGCTATTTCACAGGCATTCCAAGAAGGCTCTTTCTCATGACCACATaGCACAGGTCTGCATGCTGGGTTTCTGTTCAACACATGGTCGCT | + |
|
Preference number: 2 (lower is better) Translates to: SYFTGIPRRLFLMTT*HRSACWVSVQHMVA Trigger: AGCGACCATGTGTTGAACAGAAACCCAGCATGCAGACCTGTGCAATGTGGTCATGAGAAAGAGCCTTCTTGGAATGCCTGTGAAATAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGAGTCTTCCTTTTGCATaGTCCCAGCAGAAACTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: KFSAIALCVRYLGSTPALSLPFA*SQQKLL Trigger: AAGCAGTTTCTGCTGGGAGCATGCAAAAGGAAGACT...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCCAGGGCTACACAGAGAAACCCTGTCTTAATCCCAAAGGTCTGGATTTCTTATATTGGGCATGTGCATaGACATGGCACAGGGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: SQGYTEKPCLNPKGLDFLYWACA*TWHRDV Trigger: CACATCCCTGTGCCATGTGCATGCACATGCCCAATA...TAAGAAATCCAGACCTTTGGGATTAAGACAGGGTTTCTCTGTGTAGCCCTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCTGCTTTCACGGTGTCTTCCACGGTGGCTACTGTCTTATGGGAGCCAGGAAAGTTCAGGAACAGATaGCTGGACCTTAGAAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: FAAFTVSSTVATVLWEPGKFRNR*LDLRNL Trigger: AAGATTTCTAAGGTCCAGCCATCTGTTCCTGAACTT...TCCTGGCTCCCATAAGACAGTAGCCACCGTGGAAGACACCGTGAAAGCAGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTCCCTCTGTTGGCGCAGTCTGTAAGCACATGCTCACACTTTCAGCCAGCAATTTAGTGTTCCTGAACTaGAGACTCTCTTTCTTACAG | + |
|
Preference number: 2 (lower is better) Translates to: APSVGAVCKHMLTLSASNLVFLN*RLSFLQ Trigger: CTGTAAGAAAGAGAGTCTCCAGTTCAGGAACACTAA...ATTGCTGGCTGAAAGTGTGAGCATGTGCTTACAGACTGCGCCAACAGAGGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGATCCACACCAGTGGGACTTAGGCTGCTCATGCCAACATTACCAAACGACAGTTGGATTCAGGAAGTaGCTGATTAACTTCCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: SDPHQWDLGCSCQHYQTTVGFRK*LINFLH Trigger: GTGGAGGAAGTTAATCAGCCACTTCCTGAATCCAAC...TGTCGTTTGGTAATGTTGGCATGAGCAGCCTAAGTCCCACTGGTGTGGATCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTCTGTAAGCACATGCTCACACTTTCAGCCAGCAATGCATTTGGGAAGAACGCTCTGAAGAGCTGTTaGATTCAGGAAGTGGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: AVCKHMLTLSASNAFGKNALKSC*IQEVAD Trigger: ATCAGCCACTTCCTGAATCCAACAGCTCTTCAGAGC...GTTCTTCCCAAATGCATTGCTGGCTGAAAGTGTGAGCATGTGCTTACAGACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 90 bp | CCTGGTAAATTTTCTGGTTATCTGATGGCCGGTAAGGCTCATCTTTaGTTCCCTGTGGTAATTCAGTGCTGTTACTGGCTCCCTCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: PGKFSGYLMAGKAHL*FPVVIQCCYWLPLL Trigger: CAACAGAGGGAGCCAGTAACAGCACTGAATTACCACAGGGAACAAAAGATGAGCCTTACCGGCCATCAGATAACCAGAAAATTTACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGTCGATTTTCACTCCTAGGCTCCTTAGCTGTTTAATAGTTGCACTGAGTACACCCAGTGGTAGCTTCTaGGCTGTGTTTGGCATCACA | + |
|
Preference number: 2 (lower is better) Translates to: ESIFTPRLLSCLIVALSTPSGSF*AVFGIT Trigger: TGTGATGCCAAACACAGCTCAGAAGCTACCACTGGG...TGTACTCAGTGCAACTATTAAACAGCTAAGGAGCCTAGGAGTGAAAATCGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCTAGGCTGCACAGCTTaGTTTGTGATATTTCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: KFSAIALCVRYLGSTPALLGCTA*FVIFLS Trigger: ACTGAGAAATATCACAAATCAAGCTGTGCAGCCTAG...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 90 bp | GTCATCATTTCCAAAGGGTTAGACTGGTTACTTGACTCTGTGAAGTaGTTGTCTAACACGAGCGAAAGTTCAGGAACAGATGGCTGGACC | + |
|
Preference number: 2 (lower is better) Translates to: VIISKGLDWLLDSVK*LSNTSESSGTDGWT Trigger: GGTCCAGCCATCTGTTCCTGAACTTTCGCTCGTGTTAGACAACAACTTCACAGAGTCAAGTAACCAGTCTAACCCTTTGGAAATGATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 90 bp | TACTATACTGAATATGGCCATGATGCTGACAACAGCTGCAGACGTTaGTGGGATAGTAGGATGGTAATGAAGGAGTGGGCACTTGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: YYTEYGHDADNSCRR*WDSRMVMKEWALEA Trigger: AGCTTCAAGTGCCCACTCCTTCATTACCATCCTACTATCCCACAAACGTCTGCAGCTGTTGTCAGCATCATGGCCATATTCAGTATAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCGCTCCCAGCAGAAACTaGTTGAAGTTTCTCAGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: ISKCKALGYRETHLNLISAPSRN*LKFLSY Trigger: GTAGCTGAGAAACTTCAAGCAGTTTCTGCTGGGAGC...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCAGGAGATGGCAAGGTTCCGGGAAAAACTGCAATGTCTCTTTCATTTTCCTCTCAGCTGCCTGTCTTaGTCTGTGACAAAACGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: SQEMARFREKLQCLFHFPLSCLS*SVTKRY Trigger: ATACCGTTTTGTCACAGAGCAAGACAGGCAGCTGAG...AGGAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACCTTGCCATCTCCTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCATTCCAAGAAGGCTCTTTCTCATGACCACATTGCACAGGTCTGCATGCTGTCACAAAGCTCAGGCTaGGATGGCTTAATCAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: RHSKKALSHDHIAQVCMLSQSSG*DGLINK Trigger: TTTATTGATTAAGCCATCCCAGCCTGAGCTTTGTGA...CAGCATGCAGACCTGTGCAATGTGGTCATGAGAAAGAGCCTTCTTGGAATGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGAGATGGCAAGGTTCCGGGAAAAACTGCAATGTCTCTTTCATTTTCCTTCCATCATGCCATTGTCTaGTGCTGTATTGGGCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: SGDGKVPGKTAMSLSFSFHHAIV*CCIGHV Trigger: CACATGCCCAATACAGCACCAGACAATGGCATGATG...GAAGGAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACCTTGCCATCTCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCAGTACTTCAGAGCAATaGCATTGGCCTCCATGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: ISKCKALGYRETHLNLISSTSEQ*HWPPCS Trigger: TGAGCATGGAGGCCAATGCCATTGCTCTGAAGTACT...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGAGGTATAAAGTTCAGTaGTATAGCACTTTGTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: KFSAIALCVRYLGSTPALRYKVQ*YSTLCE Trigger: CTCACACAAAGTGCTATAGCACTGAACTTTATACCT...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCACACTTTTTCTCATGTaGAAGCCAGGCGAAGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: ISKCKALGYRETHLNLISTLFLM*KPGEDC Trigger: ACAGTCTTCGCCTGGCTTGCACATGAGAAAAAGTGT...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCAAAAACAAGATTGTGTaGCTGGGCTTGTGGAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: ISKCKALGYRETHLNLISKNKIV*LGLWSK Trigger: CTTGCTCCACAAGCCCAGCCACACAATCTTGTTTTT...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 90 bp | ATCATTTCCAAAGGGTTAGACTGGTTACTTGACTCTGTGAAGTTGTaGTCTAACACGAGCGAAAGTTCAGGAACAGATGGCTGGACCTTA | + |
|
Preference number: 2 (lower is better) Translates to: IISKGLDWLLDSVKL*SNTSESSGTDGWTL Trigger: TAAGGTCCAGCCATCTGTTCCTGAACTTTCGCTCGTGTTAGACAACAACTTCACAGAGTCAAGTAACCAGTCTAACCCTTTGGAAATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCCAGGGCTACACAGAGAAACCCTGTCTTAATCCCAAAGGTCTGGATTTCTTACTGGTCTTAGAGTCTTaGTTCTGTTTTAGGTTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: SQGYTEKPCLNPKGLDFLLVLES*FCFRFS Trigger: ACTGAACCTAAAACAGAAGCAAGACTCTAAGACCAG...TAAGAAATCCAGACCTTTGGGATTAAGACAGGGTTTCTCTGTGTAGCCCTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCAGGAGACAGTCCCATCATGCCATTGTCTGGTGCTGTATTGGGCATGTGCATCCTACTGTATTTCCCTaGCAAGAATTTATTGTACTA | + |
|
Preference number: 2 (lower is better) Translates to: IRRQSHHAIVWCCIGHVHPTVFP*QEFIVL Trigger: TAGTACAATAAATTCTTGGCAGGGAAATACAGTAGG...ATGCACATGCCCAATACAGCACCAGACAATGGCATGATGGGACTGTCTCCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | AATAGGGAAAAGACTCTAAAAGGTATTAGAAATTCCAAAGGTCATGGCCGCCAGGAGACAGTCCCATCATaGCATTGTCTGGTGCTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: NREKTLKGIRNSKGHGRQETVPS*HCLVLY Trigger: ATACAGCACCAGACAATGGCATGATGGGACTGTCTC...CTGGCGGCCATGACCTTTGGAATTTCTAATACCTTTTAGAGTCTTTTCCCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGGAGATGGCAAGGTTCCGGGAAAAACTGCAATGTCTCTTTCATTTTCCTTCTCTGGATTTCTTAAGTaGCATCAATACACACCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: SGDGKVPGKTAMSLSFSFSGFLK*HQYTPS Trigger: ACTGGGTGTGTATTGATGGCACTTAAGAAATCCAGA...GAAGGAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACCTTGCCATCTCCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCCTGGTCTTAGAGTCTTaGTTCTGTTTTAGGTTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: ISKCKALGYRETHLNLISLVLES*FCFRFS Trigger: ACTGAACCTAAAACAGAAGCAAGACTCTAAGACCAG...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| 3UTR-3UTR GCA 90 bp | AATAGGGAAAAGACTCTAAAAGGTATTAGAAATTCCAAAGGTCATGGCCGCCAGTCTGGATTTCTTAAGTaGCATCAATACACACCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: NREKTLKGIRNSKGHGRQSGFLK*HQYTPS Trigger: ACTGGGTGTGTATTGATGGCACTTAAGAAATCCAGA...CTGGCGGCCATGACCTTTGGAATTTCTAATACCTTTTAGAGTCTTTTCCCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTGCCAGAAGGTTCAACGTTATTGAAAAGATGCAAAGTCTCCTTGTTGGTTGGAGAGAAGAGACCTTaGGATCTGATTGCAGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FLPEGSTLLKRCKVSLLVGEKRP*DLIAAK Trigger: TTTTGCTGCAATCAGATCCCAAGGTCTCTTCTCTCC...AACCAACAAGGAGACTTTGCATCTTTTCAATAACGTTGAACCTTCTGGCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147519.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGAGATGGCAAGGTTCCGGGAAAAACTGCAATGTCTCTTTCATTTTCCTTCCCAGGAGATAATTTTTaGGAGGATTGGAAATGTATA | + |
|
Preference number: 2 (lower is better) Translates to: SGDGKVPGKTAMSLSFSFPGDNF*EDWKCI Trigger: TATACATTTCCAATCCTCCCAAAAATTATCTCCTGG...GAAGGAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACCTTGCCATCTCCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR TCA 72 bp | TGGGCCCCTCCGGAAAGGCTCCCCAGTGGTAGCTTCTaGGCTGTGTTTGGCATCACAAAGCTCAGGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WAPPERLPSGSF*AVFGITKLRLG Trigger: TCCCAGCCTGAGCTTTGTGATGCCAAACACAGCTCAGAAGCTACCACTGGGGAGCCTTTCCGGAGGGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR TCA 72 bp | CATGGCACAGGGATGTGGCACACACGAGTCCACATGTaGAGGTCCTGCCACAGGAGACGGTTCTCCATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HGTGMWHTRVHM*RSCHRRRFSIA Trigger: AGCAATGGAGAACCGTCTCCTGTGGCAGGACCTTCACATGTGGACTCGTGTGTGCCACATCCCTGTGCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | CATGTGAAGGTCCTGCCACAGGAGACGGTTCTCCATTaGTATGGGGAGAATAGGCACCCATGCCTCCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HVKVLPQETVLH*YGENRHPCLLA Trigger: AGCAAGGAGGCATGGGTGCCTATTCTCCCCATAGCAATGGAGAACCGTCTCCTGTGGCAGGACCTTCACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | CTTGTGGAGCAAGAGAGGGCTGCCTCGAGTCCAGTGTaGAAGGTCTCACAGGGTAGTCTTCCTTTTGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: LVEQERAASSPV*KVSQGSLPFAC Trigger: GCATGCAAAAGGAAGACTACCCTGTGAGACCTTCCACACTGGACTCGAGGCAGCCCTCTCTTGCTCCACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | AAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTaGGTCAACCACCCCCAACCCCCAGCCAATGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: KPSLPTKKPPHN*VNHPQPPANVN Trigger: ATTAACATTGGCTGGGGGTTGGGGGTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | CATTGTCTGGTGCTGTATTGGGCATGTGCATGCACATaGCACAGGGATGTGGCACACACGAGTCCACATGTG | + |
|
Preference number: 3 (lower is better) Translates to: HCLVLYWACACT*HRDVAHTSPHV Trigger: CACATGTGGACTCGTGTGTGCCACATCCCTGTGCCATGTGCATGCACATGCCCAATACAGCACCAGACAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | GAGACAGTCCCATCATGCCATTGTCTGGTGCTGTATTaGGCATGTGCATGCACATGGCACAGGGATGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ETVPSCHCLVLY*ACACTWHRDVA Trigger: TGCCACATCCCTGTGCCATGTGCATGCACATGCCCAATACAGCACCAGACAATGGCATGATGGGACTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCTGCTTTCACGGTGTCTTCCACGGTGGCTACTGTCTTATGGGAGCCAGGAGACTTAACTGATTTGTaGGGCCCCTCCGGAAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FAAFTVSSTVATVLWEPGDLTDL*GPSGKA Trigger: AGCCTTTCCGGAGGGGCCCAACAAATCAGTTAAGTC...TCCTGGCTCCCATAAGACAGTAGCCACCGTGGAAGACACCGTGAAAGCAGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCGGCTGTGAGTCGGGCTCTTGATCATCACCTGCTGCATTCCAAAACAAGCAGTCCCATCATGCCATaGTCTGGTGCTGTATTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ASAVSRALDHHLLHSKTSSPIMP*SGAVLG Trigger: GCCCAATACAGCACCAGACAATGGCATGATGGGACT...GCTTGTTTTGGAATGCAGCAGGTGATGATCAAGAGCCCGACTCACAGCCGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR TCA 72 bp | TCTGTGCGTGTGTCCGCAGAGCCACAGTCAGAGCACTaGGCTATTTCACAGGCATTCCAAGAAGGCTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SVRVSAEPQSEH*AISQAFQEGSF Trigger: GAAAGAGCCTTCTTGGAATGCCTGTGAAATAGCTCAGTGCTCTGACTGTGGCTCTGCGGACACACGCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | CAATGGCATTGGCCTCCATGCTCAGATCCACACCAGTaGGACTTAGGCTGCTCATGCCAACATTACCAAACG | + |
|
Preference number: 3 (lower is better) Translates to: QWHWPPCSDPHQ*DLGCSCQHYQT Trigger: CGTTTGGTAATGTTGGCATGAGCAGCCTAAGTCCCACTGGTGTGGATCTGAGCATGGAGGCCAATGCCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | TGTTCAACACATGGTCGCTCTCACTATCTGCGTGGCTaGGAGGCTCCTCTTCATCCTCACTATTGTCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: CSTHGRSHYLRG*EAPLHPHYCHC Trigger: GCAGTGACAATAGTGAGGATGAAGAGGAGCCTCCCAGCCACGCAGATAGTGAGAGCGACCATGTGTTGAACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCTGCTTTCACGGTGTCTTCCACGGTGGCTACTGTCTTATGGGAGCCAGGACAGTGCTATAGCACTTaGTGTGAGGTACCTGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FAAFTVSSTVATVLWEPGQCYST*CEVPGF Trigger: GAACCCAGGTACCTCACACAAAGTGCTATAGCACTG...TCCTGGCTCCCATAAGACAGTAGCCACCGTGGAAGACACCGTGAAAGCAGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCATTCCAAGAAGGCTCTTTCTCATGACCACATTGCACAGGTCTGCATGCTGGCTTCTGAGCTGTGTTaGGCATCACAAAGCTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RHSKKALSHDHIAQVCMLASELC*ASQSSG Trigger: GCCTGAGCTTTGTGATGCCAAACACAGCTCAGAAGC...CAGCATGCAGACCTGTGCAATGTGGTCATGAGAAAGAGCCTTCTTGGAATGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR TCA 72 bp | GTGCCTGAAGTAGTCTCAGCTGCCTGTCTTGCTCTGTaGCAAAACGGTATGCATCAGGAGACAGTCCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: VPEVVSAACLAL*QNGMHQETVPS Trigger: TGATGGGACTGTCTCCTGATGCATACCGTTTTGTCACAGAGCAAGACAGGCAGCTGAGACTACTTCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | CAGTGGTCAGGCTCAGTAATGGAGCCCATTAGCAAATaGAAGGCCCTGGGGTACAGGGAAACACATTTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QWSGSVMEPISK*KALGYRETHLN Trigger: GTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAATGGGCTCCATTACTGAGCCTGACCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | TCTCAGCTGCCTGTCTTGCTCTGTGACAAAACGGTATaGATCAGGAGACAGTCCCATCATGCCATTGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SQLPVLLCDKTV*IRRQSHHAIVW Trigger: CCAGACAATGGCATGATGGGACTGTCTCCTGATGCATACCGTTTTGTCACAGAGCAAGACAGGCAGCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | TACTGGCTCCCTCTGTTGGCGCAGTCTGTAAGCACATaGTCACACTTTCAGCCAGCAATGCATTTGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: YWLPLLAQSVST*SHFQPAMHLGR Trigger: TCTTCCCAAATGCATTGCTGGCTGAAAGTGTGAGCATGTGCTTACAGACTGCGCCAACAGAGGGAGCCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | CACTTAAGTACTTCAGAGCAATGGCATTGGCCTCCATaGTCAGATCCACACCAGTGGGACTTAGGCTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HLSTSEQWHWPP*SDPHQWDLGCS Trigger: TGAGCAGCCTAAGTCCCACTGGTGTGGATCTGAGCATGGAGGCCAATGCCATTGCTCTGAAGTACTTAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | TGGGTTTCTGTTCAACACATGGTCGCTCTCACTATCTaGGTGGCTGGGAGGCTCCTCTTCATCCTCACTATT | + |
|
Preference number: 3 (lower is better) Translates to: WVSVQHMVALTI*VAGRLLFILTI Trigger: AATAGTGAGGATGAAGAGGAGCCTCCCAGCCACGCAGATAGTGAGAGCGACCATGTGTTGAACAGAAACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | AGGCTGCACAGCTTGATTTGTGATATTTCTCAGTACTaGCACATCTGTGCGTGTGTCCGCAGAGCCACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RLHSLICDISQY*HICACVRRATV Trigger: GACTGTGGCTCTGCGGACACACGCACAGATGTGCCAGTACTGAGAAATATCACAAATCAAGCTGTGCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCATACCTGAGGGCTATAGACATGTATAATTCCAGCCAGCCAGATTCCCACGGGAGAGAAGAGACCTaGGGATCTGATTGCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPYLRAIDMYNSSQPDSHGREET*GSDCSK Trigger: TTTGCTGCAATCAGATCCCAAGGTCTCTTCTCTCCC...GTGGGAATCTGGCTGGCTGGAATTATACATGTCTATAGCCCTCAGGTATGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147519.8 |
||
| 3UTR GCA 72 bp | CTGTGCTTCCATGGAAACCAGCTCCATTTGTTTTGCTaGTTTCACGGTGTCTTCCACGGTGGCTACTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LCFHGNQLHLFC*FHGVFHGGYCL Trigger: AAGACAGTAGCCACCGTGGAAGACACCGTGAAAGCAGCAAAACAAATGGAGCTGGTTTCCATGGAAGCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | GGTAAGGCTCATCTTTTGTTCCCTGTGGTAATTCAGTaGTGTTACTGGCTCCCTCTGTTGGCGCAGTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GKAHLLFPVVIQ*CYWLPLLAQSV Trigger: TACAGACTGCGCCAACAGAGGGAGCCAGTAACAGCACTGAATTACCACAGGGAACAAAAGATGAGCCTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | ATATGTAGAAGGCCGACAGAGGAGTCACCGTTATTCTaGTTTGACCGAGCAAGAGACAGTTGTGACAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ICRRPTEESPLF*FDRARDSCDSW Trigger: CCAGCTGTCACAACTGTCTCTTGCTCGGTCAAAGCAGAATAACGGTGACTCCTCTGTCGGCCTTCTACATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | AGGCTCTTTCTCATGACCACATTGCACAGGTCTGCATaGTGGGTTTCTGTTCAACACATGGTCGCTCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: RLFLMTTLHRSA*WVSVQHMVALT Trigger: AGTGAGAGCGACCATGTGTTGAACAGAAACCCAGCATGCAGACCTGTGCAATGTGGTCATGAGAAAGAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | CATCTTTTGTTCCCTGTGGTAATTCAGTGCTGTTACTaGCTCCCTCTGTTGGCGCAGTCTGTAAGCACATGC | + |
|
Preference number: 3 (lower is better) Translates to: HLLFPVVIQCCY*LPLLAQSVSTC Trigger: GCATGTGCTTACAGACTGCGCCAACAGAGGGAGCCAGTAACAGCACTGAATTACCACAGGGAACAAAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | GTGACAGCTGGTTTTCACTTAAGTACTTCAGAGCAATaGCATTGGCCTCCATGCTCAGATCCACACCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VTAGFHLSTSEQ*HWPPCSDPHQW Trigger: CCACTGGTGTGGATCTGAGCATGGAGGCCAATGCCATTGCTCTGAAGTACTTAAGTGAAAACCAGCTGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | TTTCTGTTCAACACATGGTCGCTCTCACTATCTGCGTaGCTGGGAGGCTCCTCTTCATCCTCACTATTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: FLFNTWSLSLSA*LGGSSSSSLLS Trigger: TGACAATAGTGAGGATGAAGAGGAGCCTCCCAGCCACGCAGATAGTGAGAGCGACCATGTGTTGAACAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR TCA 72 bp | ATGGCATTAGGACACAGAGATGGGCATCCACTTGAGTaGAAGAAGGCATGTTTTGGAAGGGACTCAGATCGC | + |
|
Preference number: 3 (lower is better) Translates to: MALGHRDGHPLE*KKACFGRDSDR Trigger: GCGATCTGAGTCCCTTCCAAAACATGCCTTCTTTCACTCAAGTGGATGCCCATCTCTGTGTCCTAATGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR TCA 72 bp | AGAGATTGTGCTTCTAATAAGCGCTGGATCTGTGCCTaGAGTAGTCTCAGCTGCCTGTCTTGCTCTGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: RDCASNKRWICA*SSLSCLSCSVT Trigger: TGTCACAGAGCAAGACAGGCAGCTGAGACTACTTCAGGCACAGATCCAGCGCTTATTAGAAGCACAATCTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR TCA 72 bp | TTCACTGGAAATCTTGGTATCATCTTGCTTCGGCTGTaGGTCGGGCTCTTGATCATCACCTGCTGCATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FTGNLGIILLRL*VGLLIITCCIP Trigger: TGGAATGCAGCAGGTGATGATCAAGAGCCCGACTCACAGCCGAAGCAAGATGATACCAAGATTTCCAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR TCA 72 bp | GCTATTTCACAGGCATTCCAAGAAGGCTCTTTCTCATaGCCACATTGCACAGGTCTGCATGCTGGGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AISQAFQEGSFS*PHCTGLHAGFL Trigger: CAGAAACCCAGCATGCAGACCTGTGCAATGTGGTCATGAGAAAGAGCCTTCTTGGAATGCCTGTGAAATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | GTGTGGAAGGTCTCACAGGGTAGTCTTCCTTTTGCATaGTCCCAGCAGAAACTGCTTGAAGTTTCTCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VWKVSQGSLPFA*SQQKLLEVSQL Trigger: TAGCTGAGAAACTTCAAGCAGTTTCTGCTGGGAGCATGCAAAAGGAAGACTACCCTGTGAGACCTTCCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | AAGAAGGCTCTTTCTCATGACCACATTGCACAGGTCTaGATGCTGGGTTTCTGTTCAACACATGGTCGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KKALSHDHIAQV*MLGFCSTHGRS Trigger: AGAGCGACCATGTGTTGAACAGAAACCCAGCATGCAGACCTGTGCAATGTGGTCATGAGAAAGAGCCTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | TATGGCCATGATGCTGACAACAGCTGCAGACGTTTGTaGGATAGTAGGATGGTAATGAAGGAGTGGGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: YGHDADNSCRRL*DSRMVMKEWAL Trigger: AAGTGCCCACTCCTTCATTACCATCCTACTATCCCACAAACGTCTGCAGCTGTTGTCAGCATCATGGCCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | CTCTTTCTCATGACCACATTGCACAGGTCTGCATGCTaGGTTTCTGTTCAACACATGGTCGCTCTCACTATC | + |
|
Preference number: 3 (lower is better) Translates to: LFLMTTLHRSAC*VSVQHMVALTI Trigger: GATAGTGAGAGCGACCATGTGTTGAACAGAAACCCAGCATGCAGACCTGTGCAATGTGGTCATGAGAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGATCCACACCAGTGGGACTTAGGCTGCTCATGCCAACATTACCAAACGACATACAGGGAAACACATTaGAACTTGATTAGCTGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: SDPHQWDLGCSCQHYQTTYRETH*NLISCG Trigger: GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTA...TGTCGTTTGGTAATGTTGGCATGAGCAGCCTAAGTCCCACTGGTGTGGATCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTGGTTGCAAATGACATGTTGCTTGGTGAAACTAAGCTAAGCCCCACTGTAGGCACCCATGCCTCCTaGCTTCATGCTAACAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FLVANDMLLGETKLSPTVGTHAS*LHANRA Trigger: AGCCCTGTTAGCATGAAGCAAGGAGGCATGGGTGCC...TACAGTGGGGCTTAGCTTAGTTTCACCAAGCAACATGTCATTTGCAACCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCGGCTGTGAGTCGGGCTCTTGATCATCACCTGCTGCATTCCAAAACAAGCGAAGCTCCATTGGTCTaGTTGAATTATGAGTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ASAVSRALDHHLLHSKTSEAPLV*LNYELK Trigger: TTTCAACTCATAATTCAACAAGACCAATGGAGCTTC...GCTTGTTTTGGAATGCAGCAGGTGATGATCAAGAGCCCGACTCACAGCCGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGAGATGGCAAGGTTCCGGGAAAAACTGCAATGTCTCTTTCATTTTCCTTCTCTCAGCTGCCTGTCTaGCTCTGTGACAAAACGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SGDGKVPGKTAMSLSFSFSQLPV*LCDKTV Trigger: TACCGTTTTGTCACAGAGCAAGACAGGCAGCTGAGA...GAAGGAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACCTTGCCATCTCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR TCA 72 bp | GTAGATGGCATTAGGACACAGAGATGGGCATCCACTTaGGTGAAAGAAGGCATGTTTTGGAAGGGACTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VDGIRTQRWAST*VKEGMFWKGLR Trigger: TCTGAGTCCCTTCCAAAACATGCCTTCTTTCACTCAAGTGGATGCCCATCTCTGTGTCCTAATGCCATCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR TCA 72 bp | CTCTGCTCTGAAGAGCTGTTGGATTCAGGAAGTGGCTaGTTAACTTCCTCCACAGCAAGGTTGCTTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LCSEELLDSGSG*LTSSTARLLSS Trigger: TGAAGAAAGCAACCTTGCTGTGGAGGAAGTTAATCAGCCACTTCCTGAATCCAACAGCTCTTCAGAGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR TCA 72 bp | ACATGTAGTTTAATCCAGAGATCACTGCTTCCGGGCTaGTGCAGGCCAAAACACTGGCATGATCCACTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TCSLIQRSLLPG*CRPKHWHDPLS Trigger: AGAAAGTGGATCATGCCAGTGTTTTGGCCTGCATCAGCCCGGAAGCAGTGATCTCTGGATTAAACTACATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | TACACTTTTTCTCATGTGCAAGCCAGGCGAAGACTGTaGTTCCATGGAAACCAGCTCCATTTGTTTTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: YTFSHVQARRRL*FHGNQLHLFCC Trigger: GCAGCAAAACAAATGGAGCTGGTTTCCATGGAAGCACAGTCTTCGCCTGGCTTGCACATGAGAAAAAGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | TGCTCAGATCCACACCAGTGGGACTTAGGCTGCTCATaGCAACATTACCAAACGACATGTAGTTTAATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CSDPHQWDLGCS*QHYQTTCSLIQ Trigger: CTGGATTAAACTACATGTCGTTTGGTAATGTTGGCATGAGCAGCCTAAGTCCCACTGGTGTGGATCTGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | GCTTCTGAGCTGTGTTTGGCATCACAAAGCTCAGGCTaGGATGGCTTAATCAATAAAGGATTCTCCACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: ASELCLASQSSG*DGLINKGFSTV Trigger: GACTGTGGAGAATCCTTTATTGATTAAGCCATCCCAGCCTGAGCTTTGTGATGCCAAACACAGCTCAGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | AATAGGGAAAAGACTCTAAAAGGTATTAGAAATTCCAAAGGTCATGGCCGCCAGTTCAGAGCAATGGCATaGGCCTCCATGCTCAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: NREKTLKGIRNSKGHGRQFRAMA*ASMLRS Trigger: GGATCTGAGCATGGAGGCCAATGCCATTGCTCTGAA...CTGGCGGCCATGACCTTTGGAATTTCTAATACCTTTTAGAGTCTTTTCCCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | CACAGAACACCTCATGGACTGAGGTATAAAGTTCAGTaGTATAGCACTTTGTGTGAGGTACCTGGGTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: HRTPHGLRYKVQ*YSTLCEVPGFN Trigger: GTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTTTATACCTCAGTCCATGAGGTGTTCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | TTTCTCAGCTACATCAGGAGATGGCACACTGAGAGATaGTTTAGCATTAGTGTTCCTGAACTGGAGACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FLSYIRRWHTER*FSISVPELETL Trigger: GAGAGTCTCCAGTTCAGGAACACTAATGCTAAACCATCTCTCAGTGTGCCATCTCCTGATGTAGCTGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGGAGACAGTCCCATCATGCCATTGTCTGGTGCTGTATTGGGCATGTGCATCCTGCCAAGAATTTATaGTACTATACTGAATATGGC | + |
|
Preference number: 3 (lower is better) Translates to: IRRQSHHAIVWCCIGHVHPAKNL*YYTEYG Trigger: GCCATATTCAGTATAGTACAATAAATTCTTGGCAGG...ATGCACATGCCCAATACAGCACCAGACAATGGCATGATGGGACTGTCTCCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGAGATGGCAAGGTTCCGGGAAAAACTGCAATGTCTCTTTCATTTTCCTTCCTCAGATCGCAGGTCTaGAATAGACCCTACTGTATT | + |
|
Preference number: 3 (lower is better) Translates to: SGDGKVPGKTAMSLSFSFLRSQV*NRPYCI Trigger: AATACAGTAGGGTCTATTCAAGACCTGCGATCTGAG...GAAGGAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACCTTGCCATCTCCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | GGCTGGGAGGCTCCTCTTCATCCTCACTATTGTCACTaGTTTGTAAGAGTCCATACCTCTTCATGTATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GWEAPLHPHYCH*FVRVHTSSCIF Trigger: AAAAATACATGAAGAGGTATGGACTCTTACAAAGCAGTGACAATAGTGAGGATGAAGAGGAGCCTCCCAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | TTCTGCTTTGACCGAGCAAGAGACAGTTGTGACAGCTaGTTTTCACTTAAGTACTTCAGAGCAATGGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: FCFDRARDSCDS*FSLKYFRAMAL Trigger: CAATGCCATTGCTCTGAAGTACTTAAGTGAAAACCAGCTGTCACAACTGTCTCTTGCTCGGTCAAAGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGGAGATGGCAAGGTTCCGGGAAAAACTGCAATGTCTCTTTCATTTTCCTGCACTTGAAGCTCCATaGGTCTTGTTGAATTATGAG | + |
|
Preference number: 3 (lower is better) Translates to: SQEMARFREKLQCLFHFPALEAP*VLLNYE Trigger: CTCATAATTCAACAAGACCAATGGAGCTTCAAGTGC...AGGAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACCTTGCCATCTCCTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR TCA 72 bp | GCACTGCCTCATCCCACCAATAAGAACCCAAGGCAATaGAAAGTTCTGCTGTTTATGCAGTATTGTGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: ALPHPTNKNPRQ*KVLLFMQYCVY Trigger: ATAGACACAATACTGCATAAACAGCAGAACTTTTCATTGCCTTGGGTTCTTATTGGTGGGATGAGGCAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| 3UTR GCA 72 bp | TACTATACTGAATATGGCCATGATGCTGACAACAGCTaGAGACGTTTGTGGGATAGTAGGATGGTAATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: YYTEYGHDADNS*RRLWDSRMVMK Trigger: CTTCATTACCATCCTACTATCCCACAAACGTCTGCAGCTGTTGTCAGCATCATGGCCATATTCAGTATAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | GGATTCTCCACAGTCATCATTTCCAAAGGGTTAGACTaGTTACTTGACTCTGTGAAGTTGTTGTCTAACACG | + |
|
Preference number: 3 (lower is better) Translates to: GFSTVIISKGLD*LLDSVKLLSNT Trigger: CGTGTTAGACAACAACTTCACAGAGTCAAGTAACCAGTCTAACCCTTTGGAAATGATGACTGTGGAGAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | ACACTGAGAGATGGTTTAGCATTAGTGTTCCTGAACTaGAGACTCTCTTTCTTACAGGTAGATGACTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TLRDGLALVFLN*RLSFLQVDDCF Trigger: GAAGCAGTCATCTACCTGTAAGAAAGAGAGTCTCCAGTTCAGGAACACTAATGCTAAACCATCTCTCAGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CCA 72 bp | AGACGTTTGTGGGATAGTAGGATGGTAATGAAGGAGTaGGCACTTGAAGCTCCATTGGTCTTGTTGAATTAT | + |
|
Preference number: 3 (lower is better) Translates to: RRLWDSRMVMKE*ALEAPLVLLNY Trigger: ATAATTCAACAAGACCAATGGAGCTTCAAGTGCCCACTCCTTCATTACCATCCTACTATCCCACAAACGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCCCAGCCAATGTTAATTaGCTACTAATAGGGAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ISKCKALGYRETHLNLISPANVN*LLIGKR Trigger: TCTTTTCCCTATTAGTAGCAAATTAACATTGGCTGG...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGAGATGGCAAGGTTCCGGGAAAAACTGCAATGTCTCTTTCATTTTCCTTCCCAGCCAATGTTAATTaGCTACTAATAGGGAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SGDGKVPGKTAMSLSFSFPANVN*LLIGKR Trigger: TCTTTTCCCTATTAGTAGCAAATTAACATTGGCTGG...GAAGGAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACCTTGCCATCTCCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR-3UTR CAA 90 bp | AATAGGGAAAAGACTCTAAAAGGTATTAGAAATTCCAAAGGTCATGGCCGCCAGTCTTCATCCTCACTATaGTCACTGCTTTGTAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: NREKTLKGIRNSKGHGRQSSSSL*SLLCKS Trigger: ACTCTTACAAAGCAGTGACAATAGTGAGGATGAAGA...CTGGCGGCCATGACCTTTGGAATTTCTAATACCTTTTAGAGTCTTTTCCCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR TCA 72 bp | AATGGATTGGGTTTTTGCCAGAAGGTTCAACGTTATTaGAAAGATGCAAAGTCTCCTTGTTGGTTAGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: NGLGFCQKVQRY*KDAKSPCWLVT Trigger: AGTTACTAACCAACAAGGAGACTTTGCATCTTTTCAATAACGTTGAACCTTCTGGCAAAAACCCAATCCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147519.8 |
||
| CDS-3UTR CCA 90 bp | GTTCGAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGTGTGGCTGGGCTTGTaGAGCAAGAGAGGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRGYPGLWIEFPDSQGYTVWLGL*SKRGLP Trigger: AGGCAGCCCTCTCTTGCTCCACAAGCCCAGCCACAC...TGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTCGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | CCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCCCAACCCCCAGCCAATGGCCTCGAGTCCAGTGTaGAAGGTCTCACAGGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLRSHLTTGSTTPNPQPMASSPV*KVSQGS Trigger: ACTACCCTGTGAGACCTTCCACACTGGACTCGAGGC...CATTGGCTGGGGGTTGGGGGTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | GTTCGAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAATTCAGTGCTGTTACTaGCTCCCTCTGTTGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRGYPGLWIEFPDSQGYTIQCCY*LPLLAQ Trigger: CTGCGCCAACAGAGGGAGCCAGTAACAGCACTGAAT...TGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTCGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGGCCAGGCGAAGACTGTaGTTCCATGGAAACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KALGYRETHLNLISCGTWARRRL*FHGNQL Trigger: GAGCTGGTTTCCATGGAAGCACAGTCTTCGCCTGGC...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTGTACTGGCACATCTGTaGGTGTGTCCGCAGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSAIALCVRYLGSTPALPVLAHL*VCPQSH Trigger: GTGGCTCTGCGGACACACGCACAGATGTGCCAGTAC...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | CCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCCCAACCCCCAGCCAATGAATCTTCTGACTCACTaGGTGAGGACTAGGAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLRSHLTTGSTTPNPQPMNLLTH*VRTRNR Trigger: CCGATTCCTAGTCCTCACCCAGTGAGTCAGAAGATT...CATTGGCTGGGGGTTGGGGGTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | CCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCCCAACCCCCAGCCAATGAGCCAGCAATGCATTTaGGAAGAACACAGGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: PLRSHLTTGSTTPNPQPMSQQCI*EEHRNT Trigger: GGTGTTCCTGTGTTCTTCCCAAATGCATTGCTGGCT...CATTGGCTGGGGGTTGGGGGTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| 3UTR CAA 72 bp | CGGAAAGGCTCCCCAGTGGTAGCTTCTGAGCTGTGTTaGGCATCACAAAGCTCAGGCTGGGATGGCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: RKGSPVVASELC*ASQSSGWDGLI Trigger: GATTAAGCCATCCCAGCCTGAGCTTTGTGATGCCAAACACAGCTCAGAAGCTACCACTGGGGAGCCTTTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | GTTCGAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGATGCTGACAACAGCTaGAGACGTTTGTGGGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRGYPGLWIEFPDSQGYTDADNS*RRLWDS Trigger: ACTATCCCACAAACGTCTGCAGCTGTTGTCAGCATC...TGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTCGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | GAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGAGAGAGTCTTCATTCAAGTaGTCTGTTGCTCTAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EATLVYGLSSRTARATQRESSFK*SVALGC Trigger: GCAGCCTAGAGCAACAGAGCACTTGAATGAAGACTC...TCTCTGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | CCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCCCAACCCCCAGCCAATGAAAGAAGGCATGTTTTaGAAGGGACTCAGATCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLRSHLTTGSTTPNPQPMKEGMF*KGLRSQ Trigger: CTGCGATCTGAGTCCCTTCCAAAACATGCCTTCTTT...CATTGGCTGGGGGTTGGGGGTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | GTTCGAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACACACAGGTCTGCATGCTaGGTTTCTGTTCAACACATG | + |
|
Preference number: 4 (lower is better) Translates to: VRGYPGLWIEFPDSQGYTHRSAC*VSVQHM Trigger: CATGTGTTGAACAGAAACCCAGCATGCAGACCTGTG...TGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTCGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| 3UTR CAA 72 bp | TGGGTCTTGGCGCATTCACGGTTGGTAACTACCGCTTaGGTAGGTGGTTCTTCGGTTTCTTGGGAGGCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: WVLAHSRLVTTA*VGGSSVSWEAL Trigger: TAACGCCTCCCAAGAAACCGAAGAACCACCTACCAAAGCGGTAGTTACCAACCGTGAATGCGCCAAGACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | CCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCCCAACCCCCAGCCAATGGCTTTCTGTAGTAACTaGGATGCAAGTAGATGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PLRSHLTTGSTTPNPQPMAFCSN*DASRCT Trigger: AGTGCATCTACTTGCATCTCAGTTACTACAGAAAGC...CATTGGCTGGGGGTTGGGGGTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | CTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCCAGTGGTAGCTTCTaGGCTGTGTTTGGCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: LNKPSLPTKKPPHNWVNHPSGSF*AVFGIT Trigger: TGTGATGCCAAACACAGCTCAGAAGCTACCACTGGG...GTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTTGTGAGTCGGGCTCTTaGTCATCACCTGCTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: FSAIALCVRYLGSTPALPCESGS*SSPAAF Trigger: GAATGCAGCAGGTGATGATCAAGAGCCCGACTCACA...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | CCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCCCAACCCCCAGCCAATGGGAAAGGTACCATCTTaGTTGAAGGAAACCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PLRSHLTTGSTTPNPQPMGKVPS*LKETWY Trigger: ATACCAGGTTTCCTTCAAGCAAGATGGTACCTTTCC...CATTGGCTGGGGGTTGGGGGTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGAGAAGTCTTCCTTTTGCATaGTCCCAGCAGAAACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EATLVYGLSSRTARATQRSLPFA*SQQKLL Trigger: AAGCAGTTTCTGCTGGGAGCATGCAAAAGGAAGACT...TCTCTGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTGCACCCATGCCTCCTTaGTTCATGCTAACAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FSAIALCVRYLGSTPALPAPMPP*FMLTGL Trigger: TAGCCCTGTTAGCATGAAGCAAGGAGGCATGGGTGC...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | GAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGAGACAGCTCCATTTGTTTTaGTGCTTTCACGGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EATLVYGLSSRTARATQRQLHLF*CFHGVF Trigger: GAAGACACCGTGAAAGCAGCAAAACAAATGGAGCTG...TCTCTGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | GTTCGAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAACTTTCAGCCAGCAATaGATTTGGGAAGAACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRGYPGLWIEFPDSQGYTTFSQQ*IWEEHR Trigger: CCTGTGTTCTTCCCAAATGCATTGCTGGCTGAAAGT...TGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTCGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | AAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCTGGCATTGGCCTCCATaGTCAGATCCACACCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KCKALGYRETHLNLISCGWHWPP*SDPHQW Trigger: CCACTGGTGTGGATCTGAGCATGGAGGCCAATGCCA...GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR TCA 90 bp | CTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTGGGTCAACCACGCCTGTCTTGCTCTGTaGCAAAACGGTATGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNKPSLPTKKPPHNWVNHACLAL*QNGMHQ Trigger: CTGATGCATACCGTTTTGTCACAGAGCAAGACAGGC...GTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR TCA 90 bp | CTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCACAGTCAGAGCACTaGGCTATTTCACAGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LNKPSLPTKKPPHNWVNHPQSEH*AISQAF Trigger: GAATGCCTGTGAAATAGCTCAGTGCTCTGACTGTGG...GTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR TCA 90 bp | GTTCGAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGCACAGCTTGATTTGTaGTATTTCTCAGTACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRGYPGLWIEFPDSQGYTAQLDL*YFSVLA Trigger: TGCCAGTACTGAGAAATATCACAAATCAAGCTGTGC...TGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTCGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | GTTCGAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACACTCTCCAATTGGCATTaGGTTCCAAAGTGCCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: VRGYPGLWIEFPDSQGYTLSNWH*VPKCQF Trigger: AAATTGGCACTTTGGAACCCAATGCCAATTGGAGAG...TGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTCGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGGATGCACTCTCCAATTaGCATTGGGTTCCAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KALGYRETHLNLISCGTWDALSN*HWVPKC Trigger: GCACTTTGGAACCCAATGCCAATTGGAGAGTGCATC...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | CCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCCCAACCCCCAGCCAATGGCACTGAGTTCAAAATaGATTGGGTTTTTGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLRSHLTTGSTTPNPQPMALSSK*IGFLPE Trigger: TTCTGGCAAAAACCCAATCCATTTTGAACTCAGTGC...CATTGGCTGGGGGTTGGGGGTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGGCTCTGAAGAGCTGTTaGATTCAGGAAGTGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KALGYRETHLNLISCGTWALKSC*IQEVAD Trigger: ATCAGCCACTTCCTGAATCCAACAGCTCTTCAGAGC...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR TCA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGCATCTTCATCCACTGTaGGAGAACCAAGTAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KALGYRETHLNLISCGTWHLHPL*ENQVRS Trigger: GCTTCTTACTTGGTTCTCTCACAGTGGATGAAGATG...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGAGAAACTATCACATCCCTTaGACCAAGTCCTTGAATATG | + |
|
Preference number: 4 (lower is better) Translates to: EATLVYGLSSRTARATQRNYHIP*TKSLNM Trigger: CATATTCAAGGACTTGGTTCAAGGGATGTGATAGTT...TCTCTGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | CCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCCCAACCCCCAGCCAATGCCTTTAAAGCTGAACTaGAGTCATCTGCATTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLRSHLTTGSTTPNPQPMPLKLN*SHLHYE Trigger: TTCATAATGCAGATGACTTCAGTTCAGCTTTAAAGG...CATTGGCTGGGGGTTGGGGGTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGTATTGGGCATGTGCATaGACATGGCACAGGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: KFSAIALCVRYLGSTPALYWACA*TWHRDV Trigger: CACATCCCTGTGCCATGTGCATGCACATGCCCAATA...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | GAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGAGACTGTGCTCACAGCAATaGTTACACTTTTTCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: EATLVYGLSSRTARATQRLCSQQ*LHFFSC Trigger: ACATGAGAAAAAGTGTAAGCATTGCTGTGAGCACAG...TCTCTGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTGAACACCAGGTTCTTTaGTCTGCTCTGAAGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSAIALCVRYLGSTPALPEHQVL*SALKSC Trigger: ACAGCTCTTCAGAGCAGAGCAAAGAACCTGGTGTTC...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | GAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGAGAGATCAAAGCGATCTATaGTCAATGTCACACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EATLVYGLSSRTARATQRDQSDL*SMSHLL Trigger: AAGAAGGTGTGACATTGACCATAGATCGCTTTGATC...TCTCTGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | GTTCGAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACATCACAAAGCTCAGGCTaGGATGGCTTAATCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRGYPGLWIEFPDSQGYTSQSSG*DGLINK Trigger: TTTATTGATTAAGCCATCCCAGCCTGAGCTTTGTGA...TGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTCGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| 3UTR CAA 72 bp | CATGGACTGAGGTATAAAGTTCAGTGCTATAGCACTTaGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HGLRYKVQCYST*CEVPGFNPSTA Trigger: GGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTTTATACCTCAGTCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| 3UTR CAA 72 bp | GCCAGCCAGATTCCCACTAACGGGAGAGAAGAGACCTaGGGATCTGATTGCAGCAAAAGTAACAGTTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ASQIPTNGREET*GSDCSKSNSLR Trigger: TCGCAAACTGTTACTTTTGCTGCAATCAGATCCCAAGGTCTCTTCTCTCCCGTTAGTGGGAATCTGGCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147519.8 |
||
| 3UTR CAA 72 bp | GTCCAGTGTGGAAGGTCTCACAGGGTAGTCTTCCTTTaGCATGCTCCCAGCAGAAACTGCTTGAAGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VQCGRSHRVVFL*HAPSRNCLKFL Trigger: GAGAAACTTCAAGCAGTTTCTGCTGGGAGCATGCAAAAGGAAGACTACCCTGTGAGACCTTCCACACTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 72 bp | GTAGAAGGCCGACAGAGGAGTCACCGTTATTCTGCTTaGACCGAGCAAGAGACAGTTGTGACAGCTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VEGRQRSHRYSA*TEQETVVTAGF Trigger: AAAACCAGCTGTCACAACTGTCTCTTGCTCGGTCAAAGCAGAATAACGGTGACTCCTCTGTCGGCCTTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 72 bp | TCTGCGTGGCTGGGAGGCTCCTCTTCATCCTCACTATaGTCACTGCTTTGTAAGAGTCCATACCTCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SAWLGGSSSSSL*SLLCKSPYLFM Trigger: CATGAAGAGGTATGGACTCTTACAAAGCAGTGACAATAGTGAGGATGAAGAGGAGCCTCCCAGCCACGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGCCAGATTCCCACTAACGGGAGAGAAGAGACCTTGGGATCTGATTGCAGCAACTATCACATCCCTTaGACCAAGTCCTTGAATATG | + |
|
Preference number: 4 (lower is better) Translates to: ASQIPTNGREETLGSDCSNYHIP*TKSLNM Trigger: CATATTCAAGGACTTGGTTCAAGGGATGTGATAGTT...GCTGCAATCAGATCCCAAGGTCTCTTCTCTCCCGTTAGTGGGAATCTGGCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147519.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGAGAAAGGTTCAACGTTATTaGAAAGATGCAAAGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EATLVYGLSSRTARATQRKVQRY*KDAKSP Trigger: AGGAGACTTTGCATCTTTTCAATAACGTTGAACCTT...TCTCTGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCACACGAGTCCACATGTaGAGGTCCTGCCACAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISKCKALGYRETHLNLISTRVHM*RSCHRR Trigger: TCTCCTGTGGCAGGACCTTCACATGTGGACTCGTGT...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR TCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGTTCTTTGCTCTGCTCTaGAGAGCTGTTGGATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KFSAIALCVRYLGSTPALFFALL*RAVGFR Trigger: CCTGAATCCAACAGCTCTTCAGAGCAGAGCAAAGAA...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR TCA 90 bp | AAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCCCCCCTGCAATGGTTTaGCTCTTCAATGTACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCKALGYRETHLNLISCGPPAMV*LFNVLL Trigger: AAGGAGTACATTGAAGAGTCAAACCATTGCAGGGGG...GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGTTGATCATCACCTGCTaGATTCCAAAACAAGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KALGYRETHLNLISCGTWLIITC*IPKQAS Trigger: GCTAGCTTGTTTTGGAATGCAGCAGGTGATGATCAA...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGCTCTTGATCATCACCTaGTGCATTCCAAAACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KALGYRETHLNLISCGTWLLIIT*CIPKQA Trigger: AGCTTGTTTTGGAATGCAGCAGGTGATGATCAAGAG...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | CTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTGGGTCAACCACGGAGAGAAGAGACCTTaGGATCTGATTGCAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LNKPSLPTKKPPHNWVNHGEKRP*DLIAAK Trigger: TTTTGCTGCAATCAGATCCCAAGGTCTCTTCTCTCC...GTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGGGAGGATCTCTTCACTaGAAGAGTCTTGGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KALGYRETHLNLISCGTWGGSLH*KSLGNL Trigger: AAGATTTCCAAGACTCTTCCAGTGAAGAGATCCTCC...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCTTCTGAGCTGTGTTTaGCATCACAAAGCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KFSAIALCVRYLGSTPALLLSCV*HHKAQA Trigger: AGCCTGAGCTTTGTGATGCCAAACACAGCTCAGAAG...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTAAAAACAAGATTGTGTaGCTGGGCTTGTGGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSAIALCVRYLGSTPALPKNKIV*LGLWSK Trigger: CTTGCTCCACAAGCCCAGCCACACAATCTTGTTTTT...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | AAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCCATCATGCCATTGTCTaGTGCTGTATTGGGCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: KCKALGYRETHLNLISCGHHAIV*CCIGHV Trigger: CACATGCCCAATACAGCACCAGACAATGGCATGATG...GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | CTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTGGGTCAACCACGTTGGATTCAGGAAGTaGCTGATTAACTTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNKPSLPTKKPPHNWVNHVGFRK*LINFLH Trigger: GTGGAGGAAGTTAATCAGCCACTTCCTGAATCCAAC...GTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| 3UTR CAA 72 bp | GAATATGGCCATGATGCTGACAACAGCTGCAGACGTTaGTGGGATAGTAGGATGGTAATGAAGGAGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EYGHDADNSCRR*WDSRMVMKEWA Trigger: TGCCCACTCCTTCATTACCATCCTACTATCCCACAAACGTCTGCAGCTGTTGTCAGCATCATGGCCATATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 72 bp | ACAGGCATTCCAAGAAGGCTCTTTCTCATGACCACATaGCACAGGTCTGCATGCTGGGTTTCTGTTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TGIPRRLFLMTT*HRSACWVSVQH Trigger: GTGTTGAACAGAAACCCAGCATGCAGACCTGTGCAATGTGGTCATGAGAAAGAGCCTTCTTGGAATGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTGCTTTCTGTAGTAACTaGGATGCAAGTAGATGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FSAIALCVRYLGSTPALPAFCSN*DASRCT Trigger: AGTGCATCTACTTGCATCTCAGTTACTACAGAAAGC...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | CTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTGGGTCAACCACCTAGGCTGCACAGCTTaGTTTGTGATATTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNKPSLPTKKPPHNWVNHLGCTA*FVIFLS Trigger: ACTGAGAAATATCACAAATCAAGCTGTGCAGCCTAG...GTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTGGAAAGGTACCATCTTaGTTGAAGGAAACCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FSAIALCVRYLGSTPALPGKVPS*LKETWY Trigger: ATACCAGGTTTCCTTCAAGCAAGATGGTACCTTTCC...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | GTTCGAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAACGTTATTGAAAAGATaGAAAGTCTCCTTGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VRGYPGLWIEFPDSQGYTTLLKR*KVSLLV Trigger: AACCAACAAGGAGACTTTGCATCTTTTCAATAACGT...TGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTCGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGAGAACGTTATTGAAAAGATaGAAAGTCTCCTTGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EATLVYGLSSRTARATQRTLLKR*KVSLLV Trigger: AACCAACAAGGAGACTTTGCATCTTTTCAATAACGT...TCTCTGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGACACTTTTTCTCATGTaGAAGCCAGGCGAAGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KFSAIALCVRYLGSTPALTLFLM*KPGEDC Trigger: ACAGTCTTCGCCTGGCTTGCACATGAGAAAAAGTGT...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGTTTGATGGGGGAAAATaGAAAGGTACCATCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KALGYRETHLNLISCGTWFDGGK*KGTILL Trigger: AAGCAAGATGGTACCTTTCCATTTTCCCCCATCAAA...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCCTCTGTTGGCGCAGTCTGTAAGCACATGCTCACACTTTCAGCCAGCAATTTTGATGGGGGAAAATaGAAAGGTACCATCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: APSVGAVCKHMLTLSASNFDGGK*KGTILL Trigger: AAGCAAGATGGTACCTTTCCATTTTCCCCCATCAAA...ATTGCTGGCTGAAAGTGTGAGCATGTGCTTACAGACTGCGCCAACAGAGGGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | CTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTGGGTCAACCACCTCTCCAATTGGCATTaGGTTCCAAAGTGCCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LNKPSLPTKKPPHNWVNHLSNWH*VPKCQF Trigger: AAATTGGCACTTTGGAACCCAATGCCAATTGGAGAG...GTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCAGCTACATCAGGAGATaGCACACTGAGAGATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KCKALGYRETHLNLISCGSYIRR*HTERWF Trigger: AAACCATCTCTCAGTGTGCCATCTCCTGATGTAGCT...GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGGCTACACAGAGAAACCCTGTCTTAATCCCAAAGGTCTGGATTTCTTATCAGAGCAATGGCATTaGCCTCCATGCTCAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQGYTEKPCLNPKGLDFLSEQWH*PPCSDP Trigger: TGGATCTGAGCATGGAGGCCAATGCCATTGCTCTGA...TAAGAAATCCAGACCTTTGGGATTAAGACAGGGTTTCTCTGTGTAGCCCTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTGATAGCCCTCTTCACTaGAAGAGTCTTGGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSAIALCVRYLGSTPALPDSPLH*KSLGNL Trigger: AAGATTTCCAAGACTCTTCCAGTGAAGAGGGCTATC...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCAGGTACCATCTTGCTTaGAGGAAACCTGGTATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KCKALGYRETHLNLISCGRYHLA*RKPGIH Trigger: ATGAATACCAGGTTTCCTTCAAGCAAGATGGTACCT...GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCGCCAAAACACTGGCATaGTCCACTTTCTGTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KCKALGYRETHLNLISCGAKTLA*STFCSF Trigger: AAATGAACAGAAAGTGGATCATGCCAGTGTTTTGGC...GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | GCTTCGGCTGTGAGTCGGGCTCTTGATCATCACCTGCTGCATTCCAAAACAAGCAATGGATTGGGTTTTTaGCAGAAGGTTCAACGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ASAVSRALDHHLLHSKTSNGLGF*QKVQRY Trigger: ATAACGTTGAACCTTCTGGCAAAAACCCAATCCATT...GCTTGTTTTGGAATGCAGCAGGTGATGATCAAGAGCCCGACTCACAGCCGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | AAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCATGATGAGTAAACTCTaGCTTTCCAGTTCGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KCKALGYRETHLNLISCGMMSKL*LSSSEV Trigger: AACCTCCGAACTGGAAAGGCAGAGTTTACTCATCAT...GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCAGGAGATAATTTTTaGGAGGATCTCTTCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KFSAIALCVRYLGSTPALPGDNF*EDLFTG Trigger: TCCAGTGAAGAGATCCTCCCAAAAATTATCTCCTGG...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGTCTGGTGCTGTATTaGGCATGTGCATGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: ISKCKALGYRETHLNLISCLVLY*ACACTW Trigger: CCATGTGCATGCACATGCCCAATACAGCACCAGACA...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR TCA 90 bp | GCAGTCTGTAAGCACATGCTCACACTTTCAGCCAGCAATGCATTTGGGAAGAACAGGTACCATCTTGCTTaGAGGAAACCTGGTATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVCKHMLTLSASNAFGKNRYHLA*RKPGIH Trigger: ATGAATACCAGGTTTCCTTCAAGCAAGATGGTACCT...GTTCTTCCCAAATGCATTGCTGGCTGAAAGTGTGAGCATGTGCTTACAGACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTTTCTTACAGGTAGATaGCTGCTTCCCTCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISKCKALGYRETHLNLISFLTGR*LLPSAL Trigger: CAGAGCAGAGGGAAGCAGTCATCTACCTGTAAGAAA...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | CTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTGGGTCAACCACAATGGATTGGGTTTTTaGCAGAAGGTTCAACGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LNKPSLPTKKPPHNWVNHNGLGF*QKVQRY Trigger: ATAACGTTGAACCTTCTGGCAAAAACCCAATCCATT...GTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCGAGACAGTCCCATCATaGCATTGTCTGGTGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ISKCKALGYRETHLNLISETVPS*HCLVLY Trigger: ATACAGCACCAGACAATGGCATGATGGGACTGTCTC...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCCCAGGTTCTTTGCTCTaGTCTGAAGAGCTGTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISKCKALGYRETHLNLISPGSLL*SEELLD Trigger: ATCCAACAGCTCTTCAGAGCAGAGCAAAGAACCTGG...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGGATCAAAGCGATCTATaGTCAATGTCACACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KFSAIALCVRYLGSTPALDQSDL*SMSHLL Trigger: AAGAAGGTGTGACATTGACCATAGATCGCTTTGATC...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGGCTACACAGAGAAACCCTGTCTTAATCCCAAAGGTCTGGATTTCTTAGGAGAGAAGAGACCTTaGGATCTGATTGCAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQGYTEKPCLNPKGLDFLGEKRP*DLIAAK Trigger: TTTTGCTGCAATCAGATCCCAAGGTCTCTTCTCTCC...TAAGAAATCCAGACCTTTGGGATTAAGACAGGGTTTCTCTGTGTAGCCCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGGAGTTCAAAATGGATTaGGTTTTTGCCAGAAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KFSAIALCVRYLGSTPALEFKMD*VFARRF Trigger: GAACCTTCTGGCAAAAACCCAATCCATTTTGAACTC...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCAAGTTCAGGAACAGATaGCTGGACCTTAGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCKALGYRETHLNLISCGKFRNR*LDLRNL Trigger: AAGATTTCTAAGGTCCAGCCATCTGTTCCTGAACTT...GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGTTAGTGTTCCTGAACTaGAGACTCTCTTTCTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: KFSAIALCVRYLGSTPALLVFLN*RLSFLQ Trigger: CTGTAAGAAAGAGAGTCTCCAGTTCAGGAACACTAA...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| 3UTR CAA 72 bp | AATGCATTTGGGAAGAACACAGGAACACCAGGTTCTTaGCTCTGCTCTGAAGAGCTGTTGGATTCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NAFGKNTGTPGS*LCSEELLDSGS Trigger: ACTTCCTGAATCCAACAGCTCTTCAGAGCAGAGCAAAGAACCTGGTGTTCCTGTGTTCTTCCCAAATGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTTTTTCCTTGCATGGTaGGTATTTTGGGTCTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ISKCKALGYRETHLNLISFFLAW*VFWVLA Trigger: CGCCAAGACCCAAAATACTCACCATGCAAGGAAAAA...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | CTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTGGGTCAACCACAGTCCAAGAAATCTTTaGTACACACATGGTATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LNKPSLPTKKPPHNWVNHSPRNL*YTHGIV Trigger: TACAATACCATGTGTGTAGCAAAGATTTCTTGGACT...GTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | CTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCTACTGTATTTCCCTaGCAAGAATTTATTGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: LNKPSLPTKKPPHNWVNHPTVFP*QEFIVL Trigger: TAGTACAATAAATTCTTGGCAGGGAAATACAGTAGG...GTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | GGAAGAACTGAACATGTATCTCAAGCAGCAAGCCCATACCTGAGGGCTATAGACGATCAAAGCGATCTATaGTCAATGTCACACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRTEHVSQAASPYLRAIDDQSDL*SMSHLL Trigger: AAGAAGGTGTGACATTGACCATAGATCGCTTTGATC...GTCTATAGCCCTCAGGTATGGGCTTGCTGCTTGAGATACATGTTCAGTTCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147519.8 |
||
| CDS-3UTR CCA 90 bp | AAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCGCAAAGTCTCCTTGTTaGTTAGTAACTGAAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KCKALGYRETHLNLISCGAKSPC*LVTETE Trigger: TTCAGTTTCAGTTACTAACCAACAAGGAGACTTTGC...GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| 3UTR CAA 72 bp | AAAGGGTTAGACTGGTTACTTGACTCTGTGAAGTTGTaGTCTAACACGAGCGAAAGTTCAGGAACAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGLDWLLDSVKL*SNTSESSGTDG Trigger: GCCATCTGTTCCTGAACTTTCGCTCGTGTTAGACAACAACTTCACAGAGTCAAGTAACCAGTCTAACCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGAGTCCAAGAAATCTTTaGTACACACATGGTATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KFSAIALCVRYLGSTPALSPRNL*YTHGIV Trigger: TACAATACCATGTGTGTAGCAAAGATTTCTTGGACT...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAGGGCTACACAGAGAAACCCTGTCTTAATCCCAAAGGTCTGGATTTCTTAGTTACTGCTGTCCATTaGAAGTTAAAATCCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: SQGYTEKPCLNPKGLDFLVTAVH*KLKSTP Trigger: TGGTGTGGATTTTAACTTGCAATGGACAGCAGTAAC...TAAGAAATCCAGACCTTTGGGATTAAGACAGGGTTTCTCTGTGTAGCCCTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | AATAGGGAAAAGACTCTAAAAGGTATTAGAAATTCCAAAGGTCATGGCCGCCAGGCTCCCAGCAGAAACTaGTTGAAGTTTCTCAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: NREKTLKGIRNSKGHGRQAPSRN*LKFLSY Trigger: GTAGCTGAGAAACTTCAAGCAGTTTCTGCTGGGAGC...CTGGCGGCCATGACCTTTGGAATTTCTAATACCTTTTAGAGTCTTTTCCCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | AATAGGGAAAAGACTCTAAAAGGTATTAGAAATTCCAAAGGTCATGGCCGCCAGCTCAGCTGCCTGTCTTaGTCTGTGACAAAACGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NREKTLKGIRNSKGHGRQLSCLS*SVTKRY Trigger: ATACCGTTTTGTCACAGAGCAAGACAGGCAGCTGAG...CTGGCGGCCATGACCTTTGGAATTTCTAATACCTTTTAGAGTCTTTTCCCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCCCTCACTATTGTCACTaGTTTGTAAGAGTCCATACC | + |
|
Preference number: 4 (lower is better) Translates to: ISKCKALGYRETHLNLISPHYCH*FVRVHT Trigger: GGTATGGACTCTTACAAAGCAGTGACAATAGTGAGG...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR GCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTTACGTCTAAGAAGGTaGCCACAGAATCCATGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ISKCKALGYRETHLNLISLRLRR*PQNPCY Trigger: ATAGCATGGATTCTGTGGGCACCTTCTTAGACGTAA...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGGCTACACAGAGAAACCCTGTCTTAATCCCAAAGGTCTGGATTTCTTAGAGTTCAAAATGGATTaGGTTTTTGCCAGAAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQGYTEKPCLNPKGLDFLEFKMD*VFARRF Trigger: GAACCTTCTGGCAAAAACCCAATCCATTTTGAACTC...TAAGAAATCCAGACCTTTGGGATTAAGACAGGGTTTCTCTGTGTAGCCCTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCAAGACTGTGCTTCCATaGAAACCAGCTCCATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISKCKALGYRETHLNLISKTVLP*KPAPFV Trigger: AACAAATGGAGCTGGTTTCCATGGAAGCACAGTCTT...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGATGGCAAGGTTCCGGGAAAAACTGCAATGTCTCTTTCATTTTCCTTCATATGCCCCCTGCAATaGTTTGACTCTTCAATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SGDGKVPGKTAMSLSFSFICPLQ*FDSSMY Trigger: GTACATTGAAGAGTCAAACCATTGCAGGGGGCATAT...GAAGGAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACCTTGCCATCTCCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 72 bp | TCCAAAGGGTTAGACTGGTTACTTGACTCTGTGAAGTaGTTGTCTAACACGAGCGAAAGTTCAGGAACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SKGLDWLLDSVK*LSNTSESSGTD Trigger: ATCTGTTCCTGAACTTTCGCTCGTGTTAGACAACAACTTCACAGAGTCAAGTAACCAGTCTAACCCTTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 72 bp | TTCATTCAAGTGCTCTGTTGCTCTAGGCTGCACAGCTaGATTTGTGATATTTCTCAGTACTGGCACATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FIQVLCCSRLHS*ICDISQYWHIC Trigger: ACAGATGTGCCAGTACTGAGAAATATCACAAATCAAGCTGTGCAGCCTAGAGCAACAGAGCACTTGAATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | ACTATACTGAATATGGCCATGATGCTGACAACAGCTGCAGACGTTTGTGGGATAAACTATCACATCCCTTaGACCAAGTCCTTGAATATG | + |
|
Preference number: 4 (lower is better) Translates to: TILNMAMMLTTAADVCGINYHIP*TKSLNM Trigger: CATATTCAAGGACTTGGTTCAAGGGATGTGATAGTT...TATCCCACAAACGTCTGCAGCTGTTGTCAGCATCATGGCCATATTCAGTATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAGGGCTACACAGAGAAACCCTGTCTTAATCCCAAAGGTCTGGATTTCTTAAAGGTTCAACGTTATTaGAAAGATGCAAAGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQGYTEKPCLNPKGLDFLKVQRY*KDAKSP Trigger: AGGAGACTTTGCATCTTTTCAATAACGTTGAACCTT...TAAGAAATCCAGACCTTTGGGATTAAGACAGGGTTTCTCTGTGTAGCCCTGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCGGTTCCGGGAAAAACTaGAATGTCTCTTTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISKCKALGYRETHLNLISGSGKN*NVSFIF Trigger: GAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACC...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CCA 90 bp | ACTATACTGAATATGGCCATGATGCTGACAACAGCTGCAGACGTTTGTGGGATAGCACTGAGTTCAAAATaGATTGGGTTTTTGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TILNMAMMLTTAADVCGIALSSK*IGFLPE Trigger: TTCTGGCAAAAACCCAATCCATTTTGAACTCAGTGC...TATCCCACAAACGTCTGCAGCTGTTGTCAGCATCATGGCCATATTCAGTATAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR TCA 90 bp | ACTATACTGAATATGGCCATGATGCTGACAACAGCTGCAGACGTTTGTGGGATACCTTTAAAGCTGAACTaGAGTCATCTGCATTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TILNMAMMLTTAADVCGIPLKLN*SHLHYE Trigger: TTCATAATGCAGATGACTTCAGTTCAGCTTTAAAGG...TATCCCACAAACGTCTGCAGCTGTTGTCAGCATCATGGCCATATTCAGTATAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAGGAGATGGCAAGGTTCCGGGAAAAACTGCAATGTCTCTTTCATTTTCCTGCAAAGTCTCCTTGTTaGTTAGTAACTGAAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQEMARFREKLQCLFHFPAKSPC*LVTETE Trigger: TTCAGTTTCAGTTACTAACCAACAAGGAGACTTTGC...AGGAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACCTTGCCATCTCCTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR CCA 90 bp | AATAGGGAAAAGACTCTAAAAGGTATTAGAAATTCCAAAGGTCATGGCCGCCAGGACAGTTGTGACAGCTaGTTTTCACTTAAGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NREKTLKGIRNSKGHGRQDSCDS*FSLKYF Trigger: GAAGTACTTAAGTGAAAACCAGCTGTCACAACTGTC...CTGGCGGCCATGACCTTTGGAATTTCTAATACCTTTTAGAGTCTTTTCCCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| 3UTR CAA 72 bp | AGTCTTCATCTTCAAGGTCAGTGTCATGCTTATTTATaGGTATTTTCCCAGGAGATAATTTTTGGGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SLHLQGQCHAYL*VFSQEIIFGRI Trigger: AATCCTCCCAAAAATTATCTCCTGGGAAAATACCAATAAATAAGCATGACACTGACCTTGAAGATGAAGACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| 3UTR CAA 72 bp | CCCAAGGCAATGAAAAGTTCTGCTGTTTATGCAGTATaGTGTCTATGTAATTTCTTAGTTTGGAAACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PKAMKSSAVYAV*CLCNFLVWKQT Trigger: AGTTTGTTTCCAAACTAAGAAATTACATAGACACAATACTGCATAAACAGCAGAACTTTTCATTGCCTTGGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | CCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCCCAACCCCCAGCCAATGGGGAGAGAAGAGACCTaGGGATCTGATTGCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PLRSHLTTGSTTPNPQPMGREET*GSDCSK Trigger: TTTGCTGCAATCAGATCCCAAGGTCTCTTCTCTCCC...CATTGGCTGGGGGTTGGGGGTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | CCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCCCAACCCCCAGCCAATGTTTCTCATGACCACATaGCACAGGTCTGCATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLRSHLTTGSTTPNPQPMFLMTT*HRSACW Trigger: CCAGCATGCAGACCTGTGCAATGTGGTCATGAGAAA...CATTGGCTGGGGGTTGGGGGTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | GTTCGAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAAGGGTAGTCTTCCTTTaGCATGCTCCCAGCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VRGYPGLWIEFPDSQGYTRVVFL*HAPSRN Trigger: GTTTCTGCTGGGAGCATGCAAAAGGAAGACTACCCT...TGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTCGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | GTTCGAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGCCCCCTGCAATGGTTaGACTCTTCAATGTACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VRGYPGLWIEFPDSQGYTAPCNG*TLQCTP Trigger: AGGAGTACATTGAAGAGTCAAACCATTGCAGGGGGC...TGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTCGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | AAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCGGCACCCATGCCTCCTaGCTTCATGCTAACAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KCKALGYRETHLNLISCGGTHAS*LHANRA Trigger: AGCCCTGTTAGCATGAAGCAAGGAGGCATGGGTGCC...GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTGACTTAACTGATTTGTaGGGCCCCTCCGGAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSAIALCVRYLGSTPALPDLTDL*GPSGKA Trigger: AGCCTTTCCGGAGGGGCCCAACAAATCAGTTAAGTC...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | GAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGAGATCTTCACTGGAAATCTaGGTATCATCTTGCTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: EATLVYGLSSRTARATQRSSLEI*VSSCFG Trigger: GCCGAAGCAAGATGATACCAAGATTTCCAGTGAAGA...TCTCTGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTTTCAGAGCAATGGCATaGGCCTCCATGCTCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: FSAIALCVRYLGSTPALPFRAMA*ASMLRS Trigger: GGATCTGAGCATGGAGGCCAATGCCATTGCTCTGAA...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | GAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGAGAAGTTACTGCTGTCCATaGCAAGTTAAAATCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: EATLVYGLSSRTARATQRSYCCP*QVKIHT Trigger: GGTGTGGATTTTAACTTGCAATGGACAGCAGTAACT...TCTCTGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | CTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTGGGTCAACCACGGGAGAGAAGAGACCTaGGGATCTGATTGCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LNKPSLPTKKPPHNWVNHGREET*GSDCSK Trigger: TTTGCTGCAATCAGATCCCAAGGTCTCTTCTCTCCC...GTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | AGCCAGGGCTACACAGAGAAACCCTGTCTTAATCCCAAAGGTCTGGATTTCTTAATTGTGTGGCTGGGCTaGTGGAGCAAGAGAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SQGYTEKPCLNPKGLDFLIVWLG*WSKRGL Trigger: CAGCCCTCTCTTGCTCCACAAGCCCAGCCACACAAT...TAAGAAATCCAGACCTTTGGGATTAAGACAGGGTTTCTCTGTGTAGCCCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGTGGAAAGGTACCATCTaGCTTGAAGGAAACCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KALGYRETHLNLISCGTWWKGTI*LEGNLV Trigger: TACCAGGTTTCCTTCAAGCAAGATGGTACCTTTCCA...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGACTCTCCAATTGGCATaGGGTTCCAAAGTGCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: KALGYRETHLNLISCGTWTLQLA*GSKVPI Trigger: AATTGGCACTTTGGAACCCAATGCCAATTGGAGAGT...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | CCACTAAGAAGCCACCTCACAACTGGGTCAACCACCCCCAACCCCCAGCCAATGAGCAAAAGTAACAGTTaGCGAGTTTCATCCATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLRSHLTTGSTTPNPQPMSKSNS*RVSSIV Trigger: TACTATGGATGAAACTCGCAAACTGTTACTTTTGCT...CATTGGCTGGGGGTTGGGGGTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | CTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTGGGTCAACCACAGAGTCTTGGAAATCTaGCTAAGAACCTCTGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LNKPSLPTKKPPHNWVNHRVLEI*LRTSAS Trigger: CGAGGCAGAGGTTCTTAGCAAGATTTCCAAGACTCT...GTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTGAAAGAAGGCATGTTTaGGAAGGGACTCAGATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSAIALCVRYLGSTPALPERRHV*EGTQIA Trigger: TGCGATCTGAGTCCCTTCCAAAACATGCCTTCTTTC...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | GTTCGAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACAGTTGCAAATGACATGTaGCTTGGTGAAACTAAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VRGYPGLWIEFPDSQGYTVANDM*LGETKL Trigger: TAGCTTAGTTTCACCAAGCAACATGTCATTTGCAAC...TGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTCGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | GTTCGAGGCTACCCTGGTCTATGGATTGAGTTCCCGGACAGCCAGGGCTACACATCTTCATCCTCACTATaGTCACTGCTTTGTAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VRGYPGLWIEFPDSQGYTSSSSL*SLLCKS Trigger: ACTCTTACAAAGCAGTGACAATAGTGAGGATGAAGA...TGTGTAGCCCTGGCTGTCCGGGAACTCAATCCATAGACCAGGGTAGCCTCGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | AAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCAGAGTCTTGGAAATCTaGCTAAGAACCTCTGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KCKALGYRETHLNLISCGRVLEI*LRTSAS Trigger: CGAGGCAGAGGTTCTTAGCAAGATTTCCAAGACTCT...GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | CTGAATAAACCCAGCCTTCCCACTAAGAAGCCACCTCACAACTGGGTCAACCACCTCAGATCGCAGGTCTaGAATAGACCCTACTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: LNKPSLPTKKPPHNWVNHLRSQV*NRPYCI Trigger: AATACAGTAGGGTCTATTCAAGACCTGCGATCTGAG...GTGGTTGACCCAGTTGTGAGGTGGCTTCTTAGTGGGAAGGCTGGGTTTATTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | AAGTTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCAGCTCCATTTGTTTaGCTGCTTTCACGGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KFSAIALCVRYLGSTPALPAPFV*LLSRCL Trigger: AAGACACCGTGAAAGCAGCAAAACAAATGGAGCTGG...CAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | AAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCACCTGGTCTAGGCTGCACAGCTaGATTTGTGATATTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KALGYRETHLNLISCGTWSRLHS*ICDISQ Trigger: CTGAGAAATATCACAAATCAAGCTGTGCAGCCTAGA...CCAGGTGCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTAAGGTACCATCTTGCTaGAAGGAAACCTGGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSAIALCVRYLGSTPALPKVPSC*KETWYS Trigger: TGAATACCAGGTTTCCTTCAAGCAAGATGGTACCTT...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTTTCACTGGAAGAGTCTaGGAAATCTTGCTAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: FSAIALCVRYLGSTPALPFTGRV*EILLRT Trigger: GGTTCTTAGCAAGATTTCCAAGACTCTTCCAGTGAA...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCGGAACACCAGGTTCTTaGCTCTGCTCTGAAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISKCKALGYRETHLNLISGTPGS*LCSEEL Trigger: CAGCTCTTCAGAGCAGAGCAAAGAACCTGGTGTTCC...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | GCAGTCTGTAAGCACATGCTCACACTTTCAGCCAGCAATGCATTTGGGAAGAACTGGAAAGGTACCATCTaGCTTGAAGGAAACCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AVCKHMLTLSASNAFGKNWKGTI*LEGNLV Trigger: TACCAGGTTTCCTTCAAGCAAGATGGTACCTTTCCA...GTTCTTCCCAAATGCATTGCTGGCTGAAAGTGTGAGCATGTGCTTACAGACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGCTATAGCACTTTGTGTGAGGTACCTGGGTTCAACCCCAGCACTGCCTCAGTCCAAGAAATCTTaGCTACACACATGGTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: FSAIALCVRYLGSTPALPQSKKS*LHTWYC Trigger: ACAATACCATGTGTGTAGCAAAGATTTCTTGGACTG...AGGCAGTGCTGGGGTTGAACCCAGGTACCTCACACAAAGTGCTATAGCACTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTCTCAGCTGCCTGTCTaGCTCTGTGACAAAACGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ISKCKALGYRETHLNLISSQLPV*LCDKTV Trigger: TACCGTTTTGTCACAGAGCAAGACAGGCAGCTGAGA...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCCAGCCAGCAATGCATTaGGGAAGAACACAGGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: ISKCKALGYRETHLNLISQPAMH*GRTQEH Trigger: GTGTTCCTGTGTTCTTCCCAAATGCATTGCTGGCTG...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS CCA 90 bp | TGCAAGTTAAAATCCACACCATCTAAACTCTCCCTGGGGGTGATTTaGGCTCGTAGGCAAAGCAACTTTCCACAGTCCAAGAAATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CKLKSTPSKLSLGVI*ARRQSNFPQSKKSL Trigger: CAAAGATTTCTTGGACTGTGGAAAGTTGCTTTGCCTACGAGCCCAAATCACCCCCAGGGAGAGTTTAGATGGTGTGGATTTTAACTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
||
| CDS CCA 90 bp | GCGCTGGATCTTCTGACTCACTGGGTGAGGACTAGGAATCGGTCTTaGAGAAAAGTCTTCATCTTCAAGGTCAGTGTCATGCTTATTTAT | + |
|
Preference number: 5 (lower is better) Translates to: ALDLLTHWVRTRNRS*RKVFIFKVSVMLIY Trigger: ATAAATAAGCATGACACTGACCTTGAAGATGAAGACTTTTCTCCAAGACCGATTCCTAGTCCTCACCCAGTGAGTCAGAAGATCCAGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129957.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGGAGACAGTCCCATCATGCCATTGTCTGGTGCTGTATTGGGCATGTGCATCAGTCCAAGAAATCTTaGCTACACACATGGTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: IRRQSHHAIVWCCIGHVHQSKKS*LHTWYC Trigger: ACAATACCATGTGTGTAGCAAAGATTTCTTGGACTG...ATGCACATGCCCAATACAGCACCAGACAATGGCATGATGGGACTGTCTCCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | AAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCTGCGGCGAAGGTTCAACGTTATaGAAAAGATGCAAAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KCKALGYRETHLNLISCGEGSTL*KRCKVS Trigger: GGAGACTTTGCATCTTTTCAATAACGTTGAACCTTC...GCCGCAGCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | AATAGGGAAAAGACTCTAAAAGGTATTAGAAATTCCAAAGGTCATGGCCGCCAGGCTTCTGAGCTGTGTTaGGCATCACAAAGCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NREKTLKGIRNSKGHGRQASELC*ASQSSG Trigger: GCCTGAGCTTTGTGATGCCAAACACAGCTCAGAAGC...CTGGCGGCCATGACCTTTGGAATTTCTAATACCTTTTAGAGTCTTTTCCCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | AATAGGGAAAAGACTCTAAAAGGTATTAGAAATTCCAAAGGTCATGGCCGCCAGAGTCCCATCATGCCATaGTCTGGTGCTGTATTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NREKTLKGIRNSKGHGRQSPIMP*SGAVLG Trigger: GCCCAATACAGCACCAGACAATGGCATGATGGGACT...CTGGCGGCCATGACCTTTGGAATTTCTAATACCTTTTAGAGTCTTTTCCCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS GCA 90 bp | ACAGGCACACACTTGAAGGAATTTGCTAGAGTTACTGCTGTCCATTaGAAGTTAAAATCCACACCATCTAAACTCTCCCTGGGGGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: TGTHLKEFARVTAVH*KLKSTPSKLSLGVI Trigger: AATCACCCCCAGGGAGAGTTTAGATGGTGTGGATTTTAACTTGCAATGGACAGCAGTAACTCTAGCAAATTCCTTCAAGTGTGTGCCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCAGTTACTGCTGTCCATaGCAAGTTAAAATCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: ISKCKALGYRETHLNLISSYCCP*QVKIHT Trigger: GGTGTGGATTTTAACTTGCAATGGACAGCAGTAACT...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGCAAATGCAAGGCCCTGGGGTACAGGGAAACACATTTGAACTTGATTAGCGCACTTGAAGCTCCATaGGTCTTGTTGAATTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISKCKALGYRETHLNLISALEAP*VLLNYE Trigger: CTCATAATTCAACAAGACCAATGGAGCTTCAAGTGC...GCTAATCAAGTTCAAATGTGTTTCCCTGTACCCCAGGGCCTTGCATTTGCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | AATAGGGAAAAGACTCTAAAAGGTATTAGAAATTCCAAAGGTCATGGCCGCCAGGGAAACCAGCTCCATTaGTTTTGCTGCTTTCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: NREKTLKGIRNSKGHGRQGNQLH*FCCFHG Trigger: ACCGTGAAAGCAGCAAAACAAATGGAGCTGGTTTCC...CTGGCGGCCATGACCTTTGGAATTTCTAATACCTTTTAGAGTCTTTTCCCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS GCA 90 bp | AGCCAGATTCCCACTAACGGGAGAGAAGAGACCTTGGGATCTGATTaGAGCAAAAGTAACAGTTTGCGAGTTTCATCCATAGTAATATAT | + |
|
Preference number: 5 (lower is better) Translates to: SQIPTNGREETLGSD*SKSNSLRVSSIVIY Trigger: ATATATTACTATGGATGAAACTCGCAAACTGTTACTTTTGCTGCAATCAGATCCCAAGGTCTCTTCTCTCCCGTTAGTGGGAATCTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGAGATGGCAAGGTTCCGGGAAAAACTGCAATGTCTCTTTCATTTTCCTTCGAAGGTTCAACGTTATaGAAAAGATGCAAAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGDGKVPGKTAMSLSFSFEGSTL*KRCKVS Trigger: GGAGACTTTGCATCTTTTCAATAACGTTGAACCTTC...GAAGGAAAATGAAAGAGACATTGCAGTTTTTCCCGGAACCTTGCCATCTCCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | AGCCAGGGCTACACAGAGAAACCCTGTCTTAATCCCAAAGGTCTGGATTTCTTACCTGCCAAGAATTTATaGTACTATACTGAATATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SQGYTEKPCLNPKGLDFLPAKNL*YYTEYG Trigger: GCCATATTCAGTATAGTACAATAAATTCTTGGCAGG...TAAGAAATCCAGACCTTTGGGATTAAGACAGGGTTTCTCTGTGTAGCCCTGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS-3UTR CAA 90 bp | AATAGGGAAAAGACTCTAAAAGGTATTAGAAATTCCAAAGGTCATGGCCGCCAGAAGGTACCATCTTGCTaGAAGGAAACCTGGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: NREKTLKGIRNSKGHGRQKVPSC*KETWYS Trigger: TGAATACCAGGTTTCCTTCAAGCAAGATGGTACCTT...CTGGCGGCCATGACCTTTGGAATTTCTAATACCTTTTAGAGTCTTTTCCCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTGGTTGCAAATGACATGTTGCTTGGTGAAACTAAGCTAAGCCCCACTGTATTCACTGGAAGAGTCTaGGAAATCTTGCTAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: FLVANDMLLGETKLSPTVFTGRV*EILLRT Trigger: GGTTCTTAGCAAGATTTCCAAGACTCTTCCAGTGAA...TACAGTGGGGCTTAGCTTAGTTTCACCAAGCAACATGTCATTTGCAACCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS-3UTR CAA 90 bp | AATAGGGAAAAGACTCTAAAAGGTATTAGAAATTCCAAAGGTCATGGCCGCCAGGAAGCTCCATTGGTCTaGTTGAATTATGAGTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NREKTLKGIRNSKGHGRQEAPLV*LNYELK Trigger: TTTCAACTCATAATTCAACAAGACCAATGGAGCTTC...CTGGCGGCCATGACCTTTGGAATTTCTAATACCTTTTAGAGTCTTTTCCCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030490.13 |
||
| CDS CAA 72 bp | GGATCCCAGCTGATAGCCCTCTTCACTGGAAGAGTCTaGGAAATCTTGCTAAGAACCTCTGCCTCGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: GSQLIALFTGRV*EILLRTSASAS Trigger: CGAAGCCGAGGCAGAGGTTCTTAGCAAGATTTCCAAGACTCTTCCAGTGAAGAGGGCTATCAGCTGGGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS TCA 72 bp | CCTCTGCCTCGGCTTCGGCATCTTGACTCTCGGCACTaGGTTCAAAATGGATTGGGTTTTTGCCAGAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PLPRLRHLDSRH*VQNGLGFCQKV Trigger: AACCTTCTGGCAAAAACCCAATCCATTTTGAACTCAGTGCCGAGAGTCAAGATGCCGAAGCCGAGGCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
||
| CDS CCA 72 bp | AAATCCACACCATCTAAACTCTCCCTGGGGGTGATTTaGGCTCGTAGGCAAAGCAACTTTCCACAGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: KSTPSKLSLGVI*ARRQSNFPQSK Trigger: CTTGGACTGTGGAAAGTTGCTTTGCCTACGAGCCCAAATCACCCCCAGGGAGAGTTTAGATGGTGTGGATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
||
| CDS TCA 72 bp | ATCTTGCTAAGAACCTCTGCCTCGGCTTCGGCATCTTaGCTCTCGGCACTGAGTTCAAAATGGATTGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ILLRTSASASAS*LSALSSKWIGF Trigger: AAACCCAATCCATTTTGAACTCAGTGCCGAGAGTCAAGATGCCGAAGCCGAGGCAGAGGTTCTTAGCAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
||
| CDS CCA 72 bp | TTGAACACTCGGATCCCAGCTGATAGCCCTCTTCACTaGAAGAGTCTTGGAAATCTTGCTAAGAACCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LNTRIPADSPLH*KSLGNLAKNLC Trigger: GCAGAGGTTCTTAGCAAGATTTCCAAGACTCTTCCAGTGAAGAGGGCTATCAGCTGGGATCCGAGTGTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141933.8 |
||
| CDS CAA 72 bp | AATCTTGCTAAGAACCTCTGCCTCGGCTTCGGCATCTaGACTCTCGGCACTGAGTTCAAAATGGATTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: NLAKNLCLGFGI*TLGTEFKMDWV Trigger: AACCCAATCCATTTTGAACTCAGTGCCGAGAGTCAAGATGCCGAAGCCGAGGCAGAGGTTCTTAGCAAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
||
| CDS CAA 90 bp | AGTCTTGGAAATCTTGCTAAGAACCTCTGCCTCGGCTTCGGCATCTaGACTCTCGGCACTGAGTTCAAAATGGATTGGGTTTTTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLGNLAKNLCLGFGI*TLGTEFKMDWVFAR Trigger: TCTGGCAAAAACCCAATCCATTTTGAACTCAGTGCCGAGAGTCAAGATGCCGAAGCCGAGGCAGAGGTTCTTAGCAAGATTTCCAAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
||
| CDS CAA 90 bp | ATAATTCCAGCCAGCCAGATTCCCACTAACGGGAGAGAAGAGACCTaGGGATCTGATTGCAGCAAAAGTAACAGTTTGCGAGTTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: IIPASQIPTNGREET*GSDCSKSNSLRVSS Trigger: GGATGAAACTCGCAAACTGTTACTTTTGCTGCAATCAGATCCCAAGGTCTCTTCTCTCCCGTTAGTGGGAATCTGGCTGGCTGGAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
||
| CDS CAA 72 bp | GTAGGGATAATGGGGATAGGCTTCACAGGCACACACTaGAAGGAATTTGCTAGAGTTACTGCTGTCCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: VGIMGIGFTGTH*KEFARVTAVHC Trigger: GCAATGGACAGCAGTAACTCTAGCAAATTCCTTCAAGTGTGTGCCTGTGAAGCCTATCCCCATTATCCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
||
| CDS GCA 72 bp | CCCACTAACGGGAGAGAAGAGACCTTGGGATCTGATTaGAGCAAAAGTAACAGTTTGCGAGTTTCATCCATA | + |
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Preference number: 6 (lower is better) Translates to: PTNGREETLGSD*SKSNSLRVSSI Trigger: TATGGATGAAACTCGCAAACTGTTACTTTTGCTGCAATCAGATCCCAAGGTCTCTTCTCTCCCGTTAGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
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| CDS CAA 72 bp | GATAATTTTTGGGAGGATCTCTTCACTGGAAGAGTCTaGGAAATCTTGCTAAGAACCTCTGCCTCGGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: DNFWEDLFTGRV*EILLRTSASAS Trigger: CGAAGCCGAGGCAGAGGTTCTTAGCAAGATTTCCAAGACTCTTCCAGTGAAGAGATCCTCCCAAAAATTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 |
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| CDS CAA 90 bp | GCAAGTGCTGTAGGGATAATGGGGATAGGCTTCACAGGCACACACTaGAAGGAATTTGCTAGAGTTACTGCTGTCCATTGCAAGTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: ASAVGIMGIGFTGTH*KEFARVTAVHCKLK Trigger: TTTTAACTTGCAATGGACAGCAGTAACTCTAGCAAATTCCTTCAAGTGTGTGCCTGTGAAGCCTATCCCCATTATCCCTACAGCACTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
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| CDS CCA 72 bp | ATTCAGGTATTTCTCGACCAGGATCAAAGCGATCTATaGTCAATGTCACACCTTCTTCATCTTCATCCACTG | + |
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Preference number: 6 (lower is better) Translates to: IQVFLDQDQSDL*SMSHLLHLHPL Trigger: CAGTGGATGAAGATGAAGAAGGTGTGACATTGACCATAGATCGCTTTGATCCTGGTCGAGAAATACCTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 ENSMUST00000147519.8 |
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| CDS GCA 72 bp | CACTTGAAGGAATTTGCTAGAGTTACTGCTGTCCATTaGAAGTTAAAATCCACACCATCTAAACTCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: HLKEFARVTAVH*KLKSTPSKLSL Trigger: CAGGGAGAGTTTAGATGGTGTGGATTTTAACTTGCAATGGACAGCAGTAACTCTAGCAAATTCCTTCAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
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| CDS TCA 72 bp | ACTGAAGTCATCTGCATTATGAACTATCACATCCCTTaGACCAAGTCCTTGAATATGAACTCTGCAGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: TEVICIMNYHIP*TKSLNMNSAGN Trigger: ATTCCCTGCAGAGTTCATATTCAAGGACTTGGTTCAAGGGATGTGATAGTTCATAATGCAGATGACTTCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 ENSMUST00000147519.8 |
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| CDS CCA 72 bp | AACTTTCCACAGTCCAAGAAATCTTTGCTACACACATaGTATTGTAAAGCCTTTAAAGCTGAACTGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: NFPQSKKSLLHT*YCKAFKAELKS Trigger: TGACTTCAGTTCAGCTTTAAAGGCTTTACAATACCATGTGTGTAGCAAAGATTTCTTGGACTGTGGAAAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 ENSMUST00000141933.8 |
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| CDS CCA 72 bp | TGCTTATTTATTGGTATTTTCCCAGGAGATAATTTTTaGGAGGATCTCTTCACTGGAAGAGTCTTGGAAATC | + |
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Preference number: 6 (lower is better) Translates to: CLFIGIFPGDNF*EDLFTGRVLEI Trigger: GATTTCCAAGACTCTTCCAGTGAAGAGATCCTCCCAAAAATTATCTCCTGGGAAAATACCAATAAATAAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 |
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| CDS CAA 72 bp | AGTCTTCATCTTCAAGGTCAGTGTCATGCTTATTTATaGGTATTTTCCCAGGAGATAATTTTTGGGAGGATC | + |
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Preference number: 6 (lower is better) Translates to: SLHLQGQCHAYL*VFSQEIIFGRI Trigger: GATCCTCCCAAAAATTATCTCCTGGGAAAATACCAATAAATAAGCATGACACTGACCTTGAAGATGAAGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030490.13 ENSMUST00000129957.8 |
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