Pregenerated sensors for STFA2L1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059657

Ensembl transcript IDs: ENSMUST00000079184.6

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TTGGTTTTCTCTTCAAGCAGTAGTCTGACCTTGTCAGCAATCTCCTaGATTTCTGATGTGGCAGGTCTGGCCTCTGACAAGCCTCCCTTT	+
Preference number: 5 (lower is better) Translates to: LVFSSSSSLTLSAIS*ISDVAGLASDKPPF Trigger: AAAGGGAGGCTTGTCAGAGGCCAGACCTGCCACATCAGAAATTCAGGAGATTGCTGACAAGGTCAGACTACTGCTTGAAGAGAAAACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079184.6
CDS TCA 72 bp	TCTTCAAGCAGTAGTCTGACCTTGTCAGCAATCTCCTaGATTTCTGATGTGGCAGGTCTGGCCTCTGACAAG	+
Preference number: 6 (lower is better) Translates to: SSSSSLTLSAIS*ISDVAGLASDK Trigger: CTTGTCAGAGGCCAGACCTGCCACATCAGAAATTCAGGAGATTGCTGACAAGGTCAGACTACTGCTTGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079184.6
CDS CCA 72 bp	TGTCAGCAATCTCCTGAATTTCTGATGTGGCAGGTCTaGCCTCTGACAAGCCTCCCTTTATTTTTCTGGTGT	+
Preference number: 6 (lower is better) Translates to: CQQSPEFLMWQV*PLTSLPLFFWC Trigger: ACACCAGAAAAATAAAGGGAGGCTTGTCAGAGGCCAGACCTGCCACATCAGAAATTCAGGAGATTGCTGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079184.6
CDS TCA 72 bp	CATATTTCTCATTGGTTTTCTCTTCAAGCAGTAGTCTaGCCTTGTCAGCAATCTCCTGAATTTCTGATGTGG	+
Preference number: 6 (lower is better) Translates to: HISHWFSLQAVV*PCQQSPEFLMW Trigger: CCACATCAGAAATTCAGGAGATTGCTGACAAGGTCAGACTACTGCTTGAAGAGAAAACCAATGAGAAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079184.6
CDS CAA 72 bp	TTATACTCGATGGCTTTGAATTTTTCATATTTCTCATaGGTTTTCTCTTCAAGCAGTAGTCTGACCTTGTCA	+
Preference number: 6 (lower is better) Translates to: LYSMALNFSYFS*VFSSSSSLTLS Trigger: TGACAAGGTCAGACTACTGCTTGAAGAGAAAACCAATGAGAAATATGAAAAATTCAAAGCCATCGAGTATAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079184.6

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