Pregenerated sensors for STEAP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000012428Ensembl transcript IDs: ENSMUST00000115421.3
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGGTCACCTTGGGAAAGGCACTGTCCACACAGGAAGCCAGAGCTaGCTGCATCCGACCCATGGTCCACTGCTGCTCGCCTACACCCTA | + |
|
Preference number: 1 (lower is better) Translates to: EGHLGKGTVHTGSQS*LHPTHGPLLLAYTL Trigger: TAGGGTGTAGGCGAGCAGCAGTGGACCATGGGTCGGATGCAGCCAGCTCTGGCTTCCTGTGTGGACAGTGCCTTTCCCAAGGTGACCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR TCA 90 bp | CTGGGAAAGGAAGTGAGGGAGGCCCACAATGAGTCATCACGTGACTaGGGCAGCGAGGGTTCCCTTGCTATTCTGGTCTTTCAAAGTGAG | + |
|
Preference number: 1 (lower is better) Translates to: LGKEVREAHNESSRD*GSEGSLAILVFQSE Trigger: CTCACTTTGAAAGACCAGAATAGCAAGGGAACCCTCGCTGCCTCAGTCACGTGATGACTCATTGTGGGCCTCCCTCACTTCCTTTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR CCA 90 bp | GAAATCAAGGGGGTACATATGACTACATACTCACTATGGCACGGCTaGCGTGTGTGTGGCTCAGTAACATATCATTTACCTAACATGCAT | + |
|
Preference number: 1 (lower is better) Translates to: EIKGVHMTTYSLWHG*RVCGSVTYHLPNMH Trigger: ATGCATGTTAGGTAAATGATATGTTACTGAGCCACACACACGCCAGCCGTGCCATAGTGAGTATGTAGTCATATGTACCCCCTTGATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR TCA 90 bp | CAAAGTGAGGCAACACTTCCTACTGTGATGATAAAGTTAGGGCCATaGCAAGAGAAAATGCTTTCTTATAACTGGACACATTATGCTCTA | + |
|
Preference number: 1 (lower is better) Translates to: QSEATLPTVMIKLGP*QEKMLSYNWTHYAL Trigger: TAGAGCATAATGTGTCCAGTTATAAGAAAGCATTTTCTCTTGTCATGGCCCTAACTTTATCATCACAGTAGGAAGTGTTGCCTCACTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTCCACACAGGAAGCCAGAGCTGGCTGCATCCGACCCATGGTCCACTGCTGTCAAGCCGTCCTTTGTaGAGGAAGAATCTTGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: TVHTGSQSWLHPTHGPLLSSRPL*RKNLGT Trigger: TGTCCCAAGATTCTTCCTCCACAAAGGACGGCTTGA...CAGCAGTGGACCATGGGTCGGATGCAGCCAGCTCTGGCTTCCTGTGTGGACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCTGCGGCACTTGAAAAACCCAATGGATCTTCCACTCTTTCCCCATCTTCCTCACAGTGGCATCCCTaGGGTTTCTGGGAAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LPAALEKPNGSSTLSPSSSQWHP*GFWERK Trigger: CTTCCTTTCCCAGAAACCCCAGGGATGCCACTGTGA...GGAAGATGGGGAAAGAGTGGAAGATCCATTGGGTTTTTCAAGTGCCGCAGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCTGCGGCACTTGAAAAACCCAATGGATCTTCCACTCTTTCCCCATCTTCCTCTGTCTATTTCATTTaGGGCTTTTCTCCAGGCATG | + |
|
Preference number: 2 (lower is better) Translates to: LPAALEKPNGSSTLSPSSSVYFI*GFSPGM Trigger: CATGCCTGGAGAAAAGCCCCAAATGAAATAGACAGA...GGAAGATGGGGAAAGAGTGGAAGATCCATTGGGTTTTTCAAGTGCCGCAGGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR CAA 90 bp | GGCTCAGTAACATATCATTTACCTAACATGCATAAGGCCTTAGGTTaGAGCTCAGCACTACAGCTAAACCCCAAATACCCCCAGATCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GSVTYHLPNMHKALG*SSALQLNPKYPQIS Trigger: ACTGATCTGGGGGTATTTGGGGTTTAGCTGTAGTGCTGAGCTCAAACCTAAGGCCTTATGCATGTTAGGTAAATGATATGTTACTGAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR CAA 90 bp | TATTTGCGTAGCTTACTAGCTAAAATTCTGGCTTATCTGACATTTTaGTACAAGGCTATTATCAGCCTGTGTCTGCCTGCGGCACTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: YLRSLLAKILAYLTF*YKAIISLCLPAALE Trigger: TTCAAGTGCCGCAGGCAGACACAGGCTGATAATAGCCTTGTACAAAAATGTCAGATAAGCCAGAATTTTAGCTAGTAAGCTACGCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCTTCCAGAACTCTACAAAACATTGCGTCATTCAACTTGCCCATAATCAAGAATCTGGTCTTTCAAAGTaGGGCAACACTTCCTACTGT | + |
|
Preference number: 2 (lower is better) Translates to: LFQNSTKHCVIQLAHNQESGLSK*GNTSYC Trigger: ACAGTAGGAAGTGTTGCCTCACTTTGAAAGACCAGA...TTCTTGATTATGGGCAAGTTGAATGACGCAATGTTTTGTAGAGTTCTGGAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR-3UTR TCA 90 bp | TCAGCACTACAGCTAAACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGATAAAGTTAGGGCCATaGCAAGAGAAAATGCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SALQLNPKYPQISMTIVMIKLGP*QEKMLS Trigger: AGAAAGCATTTTCTCTTGTCATGGCCCTAACTTTAT...CATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTTTAGCTGTAGTGCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR-3UTR CCA 90 bp | GAAATGTATAATGAAGAAAGCACACCACCACTCCTAAATGATCCCAAACAGCATGTTCCCTTGCTATTCTaGTCTTTCAAAGTGAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: EMYNEESTPPLLNDPKQHVPLLF*SFKVRQ Trigger: TTGCCTCACTTTGAAAGACCAGAATAGCAAGGGAAC...ATGCTGTTTGGGATCATTTAGGAGTGGTGGTGTGCTTTCTTCATTATACATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR-3UTR GCA 90 bp | GAAATGTATAATGAAGAAAGCACACCACCACTCCTAAATGATCCCAAACAGCATGCTCTAAACATTTACTaGAATAGTACACAAATCCTG | + |
|
Preference number: 2 (lower is better) Translates to: EMYNEESTPPLLNDPKQHALNIY*NSTQIL Trigger: CAGGATTTGTGTACTATTGCAGTAAATGTTTAGAGC...ATGCTGTTTGGGATCATTTAGGAGTGGTGGTGTGCTTTCTTCATTATACATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCTTCCAGAACTCTACAAAACATTGCGTCATTCAACTTGCCCATAATCAAGAACATGACAAGAGAAAATaGTTTCTTATAACTGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: LFQNSTKHCVIQLAHNQEHDKRK*FLITGH Trigger: GTGTCCAGTTATAAGAAAGCATTTTCTCTTGTCATG...TTCTTGATTATGGGCAAGTTGAATGACGCAATGTTTTGTAGAGTTCTGGAAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR CCA 72 bp | CCACACAGGAAGCCAGAGCTGGCTGCATCCGACCCATaGTCCACTGCTGCTCGCCTACACCCTAGCACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PHRKPELAASDP*STAARLHPSTP Trigger: TGGAGTGCTAGGGTGTAGGCGAGCAGCAGTGGACCATGGGTCGGATGCAGCCAGCTCTGGCTTCCTGTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR CCA 72 bp | CTTGGGAAAGGCACTGTCCACACAGGAAGCCAGAGCTaGCTGCATCCGACCCATGGTCCACTGCTGCTCGCC | + |
|
Preference number: 3 (lower is better) Translates to: LGKGTVHTGSQS*LHPTHGPLLLA Trigger: GGCGAGCAGCAGTGGACCATGGGTCGGATGCAGCCAGCTCTGGCTTCCTGTGTGGACAGTGCCTTTCCCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR GCA 72 bp | GGAAAGGCACTGTCCACACAGGAAGCCAGAGCTGGCTaGATCCGACCCATGGTCCACTGCTGCTCGCCTACA | + |
|
Preference number: 3 (lower is better) Translates to: GKALSTQEARAG*IRPMVHCCSPT Trigger: TGTAGGCGAGCAGCAGTGGACCATGGGTCGGATGCAGCCAGCTCTGGCTTCCTGTGTGGACAGTGCCTTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR TCA 72 bp | CAGCGAGGGTTCCCTTGCTATTCTGGTCTTTCAAAGTaGGGCAACACTTCCTACTGTGATGATAAAGTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: QRGFPCYSGLSK*GNTSYCDDKVR Trigger: CCTAACTTTATCATCACAGTAGGAAGTGTTGCCTCACTTTGAAAGACCAGAATAGCAAGGGAACCCTCGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR CCA 72 bp | TCTCCCCTCAAGCCGTCCTTTGTGGAGGAAGAATCTTaGGACAATTACATAGCTTTCCATATATCCAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPLKPSFVEEES*DNYIAFHISKE Trigger: TTCCTTGGATATATGGAAAGCTATGTAATTGTCCCAAGATTCTTCCTCCACAAAGGACGGCTTGAGGGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR GCA 72 bp | TCCTCGCTCCGACGAGTTCAGATGATTCCTTCTAACTaGACCACTTACATTGATAACAAAGACAGATTATGG | + |
|
Preference number: 3 (lower is better) Translates to: SSLRRVQMIPSN*TTYIDNKDRLW Trigger: CCATAATCTGTCTTTGTTATCAATGTAAGTGGTGCAGTTAGAAGGAATCATCTGAACTCGTCGGAGCGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR CCA 72 bp | AGGAAACAAACTAACCCTCTTTCTGTCTATTTCATTTaGGGCTTTTCTCCAGGCATGCCAAGCAAAACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RKQTNPLSVYFI*GFSPGMPSKTC Trigger: ACAGGTTTTGCTTGGCATGCCTGGAGAAAAGCCCCAAATGAAATAGACAGAAAGAGGGTTAGTTTGTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTAAACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGATCACCACGAACTCTACAAAACATaGCGTCATTCAACTTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TAKPQIPPDQYDNSYDHHELYKT*RHSTCP Trigger: TGGGCAAGTTGAATGACGCAATGTTTTGTAGAGTTC...GTGGTGATCATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTTTAGCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR-3UTR CAA 90 bp | CAATGCCTTTTCTTTATTTCAGTGACACGCGGGAAGATTGTGCAAAGATCTCCTTTCTGTCTATTTCATTaGGGGCTTTTCTCCAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QCLFFISVTRGKIVQRSPFCLFH*GLFSRH Trigger: ATGCCTGGAGAAAAGCCCCAAATGAAATAGACAGAA...AGGAGATCTTTGCACAATCTTCCCGCGTGTCACTGAAATAAAGAAAAGGCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR GCA 72 bp | AAGTTGCACACACTCTTCCAGAACTCTACAAAACATTaGGTCATTCAACTTGCCCATAATCAAGAAGCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: KLHTLFQNSTKH*VIQLAHNQEAS Trigger: CGAAGCTTCTTGATTATGGGCAAGTTGAATGACGCAATGTTTTGTAGAGTTCTGGAAGAGTGTGTGCAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR TCA 72 bp | GCAACACTTCCTACTGTGATGATAAAGTTAGGGCCATaGCAAGAGAAAATGCTTTCTTATAACTGGACACAT | + |
|
Preference number: 3 (lower is better) Translates to: ATLPTVMIKLGP*QEKMLSYNWTH Trigger: ATGTGTCCAGTTATAAGAAAGCATTTTCTCTTGTCATGGCCCTAACTTTATCATCACAGTAGGAAGTGTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR TCA 90 bp | ACTGTCCACACAGGAAGCCAGAGCTGGCTGCATCCGACCCATGGTCCACTGCTGCTTGGTCCAGTGGGGTaGGCCCAAGAGTACGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TVHTGSQSWLHPTHGPLLLGPVG*AQEYEQ Trigger: TTGCTCGTACTCTTGGGCTCACCCCACTGGACCAAG...CAGCAGTGGACCATGGGTCGGATGCAGCCAGCTCTGGCTTCCTGTGTGGACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGCAGCGAGGGTTCCCTTGCTATTCTGGTCTTTCAAAGTGAGGCAACACGCCATGAGAGATCCTTaGTCCAGTGGGGTGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEAARVPLLFWSFKVRQHAMRDP*SSGVSP Trigger: TGGGCTCACCCCACTGGACCAAGGATCTCTCATGGC...GTGTTGCCTCACTTTGAAAGACCAGAATAGCAAGGGAACCCTCGCTGCCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CCA 90 bp | CATCACGTGACTGAGGCAGCGAGGGTTCCCTTGCTATTCTGGTCTTTCAAAGTGTTTCTTTCCCAGCCCTaGCGGATGCGAGTGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HHVTEAARVPLLFWSFKVFLSQP*RMRVRV Trigger: GACCCTCACTCGCATCCGCCAGGGCTGGGAAAGAAA...CACTTTGAAAGACCAGAATAGCAAGGGAACCCTCGCTGCCTCAGTCACGTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGCAGCGAGGGTTCCCTTGCTATTCTGGTCTTTCAAAGTGAGGCAACACCCATACACCAAAGTGTaGGCTGTGCACAAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TEAARVPLLFWSFKVRQHPYTKV*AVHKTR Trigger: CCTGGTCTTGTGCACAGCCCACACTTTGGTGTATGG...GTGTTGCCTCACTTTGAAAGACCAGAATAGCAAGGGAACCCTCGCTGCCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR TCA 90 bp | CATCACGTGACTGAGGCAGCGAGGGTTCCCTTGCTATTCTGGTCTTTCAAAGTGCTGGAGAGCCCAGGCTaGGATGGTGTTAAATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HHVTEAARVPLLFWSFKVLESPG*DGVKCF Trigger: AAAGCATTTAACACCATCTCAGCCTGGGCTCTCCAG...CACTTTGAAAGACCAGAATAGCAAGGGAACCCTCGCTGCCTCAGTCACGTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CCA 90 bp | TCAGCACTACAGCTAAACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGCCCTGGGCAGAAGGCTaGACACCTGGGGGTTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SALQLNPKYPQISMTIVMPWAEG*TPGGFD Trigger: GTCGAAACCCCCAGGTGTCCAGCCTTCTGCCCAGGG...CATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTTTAGCTGTAGTGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR GCA 90 bp | CATCACGTGACTGAGGCAGCGAGGGTTCCCTTGCTATTCTGGTCTTTCAAAGTGGCTACCAAGCCCAGTTaGTTTCTGCAAAGCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HHVTEAARVPLLFWSFKVATKPS*FLQSIQ Trigger: TTGGATGCTTTGCAGAAAGCAACTGGGCTTGGTAGC...CACTTTGAAAGACCAGAATAGCAAGGGAACCCTCGCTGCCTCAGTCACGTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CCA 90 bp | CAATGCCTTTTCTTTATTTCAGTGACACGCGGGAAGATTGTGCAAAGATCTCCTGACCACGTGGGCTCCTaGCTCCAGCTGAGCAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QCLFFISVTRGKIVQRSPDHVGS*LQLSKV Trigger: TACCTTGCTCAGCTGGAGCCAGGAGCCCACGTGGTC...AGGAGATCTTTGCACAATCTTCCCGCGTGTCACTGAAATAAAGAAAAGGCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR CAA 72 bp | ATGAGTCATCACGTGACTGAGGCAGCGAGGGTTCCCTaGCTATTCTGGTCTTTCAAAGTGAGGCAACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: MSHHVTEAARVP*LFWSFKVRQHF Trigger: GAAGTGTTGCCTCACTTTGAAAGACCAGAATAGCAAGGGAACCCTCGCTGCCTCAGTCACGTGATGACTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CCA 90 bp | CATCACGTGACTGAGGCAGCGAGGGTTCCCTTGCTATTCTGGTCTTTCAAAGTGCTGCAAAGCATCCAATaGTCAAGCCAGTTTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HHVTEAARVPLLFWSFKVLQSIQ*SSQFGN Trigger: ATTCCCAAACTGGCTTGACCATTGGATGCTTTGCAG...CACTTTGAAAGACCAGAATAGCAAGGGAACCCTCGCTGCCTCAGTCACGTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR TCA 90 bp | CATCACGTGACTGAGGCAGCGAGGGTTCCCTTGCTATTCTGGTCTTTCAAAGTGTCACAAGTGTGTAGATaGCATGAAGGAAGGCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: HHVTEAARVPLLFWSFKVSQVCR*HEGRQI Trigger: GATTTGCCTTCCTTCATGTCATCTACACACTTGTGA...CACTTTGAAAGACCAGAATAGCAAGGGAACCCTCGCTGCCTCAGTCACGTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCAGAACTCTACAAAACATTGCGTCATTCAACTTGCCCATAATCAAGAAATAGCTCAGGACCTCTaGCCCCCTGGGCAGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFQNSTKHCVIQLAHNQEIAQDL*PPGQKA Trigger: AGCCTTCTGCCCAGGGGGGCAGAGGTCCTGAGCTAT...TTCTTGATTATGGGCAAGTTGAATGACGCAATGTTTTGTAGAGTTCTGGAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGATCACCACTTCTTCCAGATCCTTGGTCCAGTaGGGTGAGCCCAAGAGTACG | + |
|
Preference number: 4 (lower is better) Translates to: NPKYPQISMTIVMITTSSRSLVQ*GEPKST Trigger: CGTACTCTTGGGCTCACCCCACTGGACCAAGGATCT...GGAAGAAGTGGTGATCATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGATCACCACTTCTTCCAGAAGGCTGGACACCTaGGGGTTTCGACTCCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NPKYPQISMTIVMITTSSRRLDT*GFRLPK Trigger: TTTTGGGAGTCGAAACCCCCAGGTGTCCAGCCTTCT...GGAAGAAGTGGTGATCATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR TCA 90 bp | CTCTTCCAGAACTCTACAAAACATTGCGTCATTCAACTTGCCCATAATCAAGAAGCTCCTGGCTCCAGCTaGGCAAGGTATTCCGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LFQNSTKHCVIQLAHNQEAPGSS*ARYSAF Trigger: AAATGCGGAATACCTTGCTCAGCTGGAGCCAGGAGC...TTCTTGATTATGGGCAAGTTGAATGACGCAATGTTTTGTAGAGTTCTGGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR GCA 90 bp | TCAGCACTACAGCTAAACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGATCGGCGGTACTTTGTaGCTCGATAGAGCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SALQLNPKYPQISMTIVMIGGTL*LDRAAE Trigger: TTCTGCAGCTCTATCGAGGCACAAAGTACCGCCGAT...CATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTTTAGCTGTAGTGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGATCACCACTTCTTCCGATAGAGCTGCAGAATaGCAGCGAGAATACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NPKYPQISMTIVMITTSSDRAAE*QREYQG Trigger: TCCCTGGTATTCTCGCTGCCATTCTGCAGCTCTATC...GGAAGAAGTGGTGATCATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGATCACCACTTCTTCCATGGTCAAGCCAGTTTaGGAATCGGCGGTACTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NPKYPQISMTIVMITTSSMVKPV*ESAVLC Trigger: ACAAAGTACCGCCGATTCCCAAACTGGCTTGACCAT...GGAAGAAGTGGTGATCATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR CAA 72 bp | ATCTCCCCTCAAGCCGTCCTTTGTGGAGGAAGAATCTaGGGACAATTACATAGCTTTCCATATATCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISPQAVLCGGRI*GQLHSFPYIQG Trigger: TCCTTGGATATATGGAAAGCTATGTAATTGTCCCAAGATTCTTCCTCCACAAAGGACGGCTTGAGGGGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR TCA 90 bp | TCAGCACTACAGCTAAACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGCATTTTCAATCCCAGTaGCTTCCCGAAATCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SALQLNPKYPQISMTIVMHFQSQ*LPEISC Trigger: ACAGGAGATTTCGGGAAGTCACTGGGATTGAAAATG...CATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTTTAGCTGTAGTGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR GCA 90 bp | CAATGCCTTTTCTTTATTTCAGTGACACGCGGGAAGATTGTGCAAAGATCTCCTAGCCCAGTTGCTTTCTaGAAAGCATCCAATGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QCLFFISVTRGKIVQRSPSPVAF*KASNGQ Trigger: TTGACCATTGGATGCTTTGCAGAAAGCAACTGGGCT...AGGAGATCTTTGCACAATCTTCCCGCGTGTCACTGAAATAAAGAAAAGGCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR CAA 72 bp | ACATATCATTTACCTAACATGCATAAGGCCTTAGGTTaGAGCTCAGCACTACAGCTAAACCCCAAATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: TYHLPNMHKALG*SSALQLNPKYP Trigger: GGGGTATTTGGGGTTTAGCTGTAGTGCTGAGCTCAAACCTAAGGCCTTATGCATGTTAGGTAAATGATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR TCA 90 bp | GAAATGTATAATGAAGAAAGCACACCACCACTCCTAAATGATCCCAAACAGCATCTGATGGCAAGGAAGTaGTTCCCAACAGAAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: EMYNEESTPPLLNDPKQHLMARK*FPTEGT Trigger: TGTTCCTTCTGTTGGGAATCACTTCCTTGCCATCAG...ATGCTGTTTGGGATCATTTAGGAGTGGTGGTGTGCTTTCTTCATTATACATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR TCA 90 bp | GAAATGTATAATGAAGAAAGCACACCACCACTCCTAAATGATCCCAAACAGCATTTAGAATCGAAGGGCTaGGGAATCTCTTTCCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EMYNEESTPPLLNDPKQHLESKG*GISFRH Trigger: ATGGCGGAAAGAGATTCCTCAGCCCTTCGATTCTAA...ATGCTGTTTGGGATCATTTAGGAGTGGTGGTGTGCTTTCTTCATTATACATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR GCA 90 bp | AACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGATCACCACTTCTTCCATGCAGACAACCCCTTaGTTTTCTGAGGAATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NPKYPQISMTIVMITTSSMQTTP*FSEESV Trigger: TACTGATTCCTCAGAAAAGCAAGGGGTTGTCTGCAT...GGAAGAAGTGGTGATCATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| 3UTR CAA 72 bp | AGCTTACTAGCTAAAATTCTGGCTTATCTGACATTTTaGTACAAGGCTATTATCAGCCTGTGTCTGCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLLAKILAYLTF*YKAIISLCLPA Trigger: CGCAGGCAGACACAGGCTGATAATAGCCTTGTACAAAAATGTCAGATAAGCCAGAATTTTAGCTAGTAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR TCA 90 bp | AACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGATCACCACTTCTTCCCCAATACTTTTCCTTTaGGATAATCAACTAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NPKYPQISMTIVMITTSSPILFL*DNQLVP Trigger: CGGAACTAGTTGATTATCTCAAAGGAAAAGTATTGG...GGAAGAAGTGGTGATCATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR TCA 90 bp | GAAATGTATAATGAAGAAAGCACACCACCACTCCTAAATGATCCCAAACAGCATTTTTGCGGTTGTTACTaGCGTCTACCAATACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EMYNEESTPPLLNDPKQHFCGCY*RLPILF Trigger: GAAAAGTATTGGTAGACGTCAGTAACAACCGCAAAA...ATGCTGTTTGGGATCATTTAGGAGTGGTGGTGTGCTTTCTTCATTATACATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CCA 90 bp | TCTTTCCCAGCCCTGGCGGATGCGAGTGAGGGTCTTGTCTATGCATaGCATGATGAGGATGCACTTCAGCACCAGCACTGCGCAGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SFPALADASEGLVYA*HDEDALQHQHCAGD Trigger: ATCCCCTGCGCAGTGCTGGTGCTGAAGTGCATCCTCATCATGCCATGCATAGACAAGACCCTCACTCGCATCCGCCAGGGCTGGGAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CAA 90 bp | ACTGTCCACACAGGAAGCCAGAGCTGGCTGCATCCGACCCATGGTCCACTGCTGAATGGTCAAGCCAGTTaGGGAATCGGCGGTACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TVHTGSQSWLHPTHGPLLNGQAS*GIGGTL Trigger: CAAAGTACCGCCGATTCCCAAACTGGCTTGACCATT...CAGCAGTGGACCATGGGTCGGATGCAGCCAGCTCTGGCTTCCTGTGTGGACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS GCA 90 bp | GGCAGCGAGAATACCAGGGAGGTACACCAAGGCAAGCAGGATCAGTaGTGTTATAGGAAAGACACGATTCGGGATGGAAATGGCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GSENTREVHQGKQDQ*CYRKDTIRDGNGQA Trigger: CGCCTGGCCATTTCCATCCCGAATCGTGTCTTTCCTATAACAGCACTGATCCTGCTTGCCTTGGTGTACCTCCCTGGTATTCTCGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS GCA 90 bp | CTTGTCTATGCATGGCATGATGAGGATGCACTTCAGCACCAGCACTaGGCAGGGGATGACGAGTGCCAAAATATAAGCCGAAGGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LVYAWHDEDALQHQH*AGDDECQNISRREA Trigger: AGCCTCCCTTCGGCTTATATTTTGGCACTCGTCATCCCCTGCGCAGTGCTGGTGCTGAAGTGCATCCTCATCATGCCATGCATAGACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CCA 90 bp | AGTTTGGGAATCGGCGGTACTTTGTGCCTCGATAGAGCTGCAGAATaGCAGCGAGAATACCAGGGAGGTACACCAAGGCAAGCAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: SLGIGGTLCLDRAAE*QREYQGGTPRQAGS Trigger: TGATCCTGCTTGCCTTGGTGTACCTCCCTGGTATTCTCGCTGCCATTCTGCAGCTCTATCGAGGCACAAAGTACCGCCGATTCCCAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS GCA 90 bp | AAAGCATCCAATGGTCAAGCCAGTTTGGGAATCGGCGGTACTTTGTaGCTCGATAGAGCTGCAGAATGGCAGCGAGAATACCAGGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KASNGQASLGIGGTL*LDRAAEWQREYQGG Trigger: ACCTCCCTGGTATTCTCGCTGCCATTCTGCAGCTCTATCGAGGCACAAAGTACCGCCGATTCCCAAACTGGCTTGACCATTGGATGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CCA 90 bp | TTTCCACAGACAAACACCTGCCGGCTTGCATCTAGTGTTCCTGACTaGAGAGCCCAGGCTGAGATGGTGTTAAATGCTTTGACCACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPQTNTCRLASSVPD*RAQAEMVLNALTTW Trigger: CCACGTGGTCAAAGCATTTAACACCATCTCAGCCTGGGCTCTCCAGTCAGGAACACTAGATGCAAGCCGGCAGGTGTTTGTCTGTGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CCA 90 bp | CAAGCCCAGTTGCTTTCTGCAAAGCATCCAATGGTCAAGCCAGTTTaGGAATCGGCGGTACTTTGTGCCTCGATAGAGCTGCAGAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QAQLLSAKHPMVKPV*ESAVLCASIELQNG Trigger: GCCATTCTGCAGCTCTATCGAGGCACAAAGTACCGCCGATTCCCAAACTGGCTTGACCATTGGATGCTTTGCAGAAAGCAACTGGGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CCA 90 bp | CCGTTCAGTGCTGATTGTGTGTACTTTGAGTTTCTTTCCCAGCCCTaGCGGATGCGAGTGAGGGTCTTGTCTATGCATGGCATGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PFSADCVYFEFLSQP*RMRVRVLSMHGMMR Trigger: CCTCATCATGCCATGCATAGACAAGACCCTCACTCGCATCCGCCAGGGCTGGGAAAGAAACTCAAAGTACACACAATCAGCACTGAACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS TCA 90 bp | CCAAAATATAAGCCGAAGGGAGGCTCCACCTTAGAATCGAAGGGCTaGGGAATCTCTTTCCGCCATACACCAAAGTGTGGGCTGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PKYKPKGGSTLESKG*GISFRHTPKCGLCT Trigger: TGTGCACAGCCCACACTTTGGTGTATGGCGGAAAGAGATTCCTCAGCCCTTCGATTCTAAGGTGGAGCCTCCCTTCGGCTTATATTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS GCA 90 bp | CATGAAGGAAGGCAAATCCCAGAGCTACCAAGCCCAGTTGCTTTCTaGAAAGCATCCAATGGTCAAGCCAGTTTGGGAATCGGCGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: HEGRQIPELPSPVAF*KASNGQASLGIGGT Trigger: AGTACCGCCGATTCCCAAACTGGCTTGACCATTGGATGCTTTGCAGAAAGCAACTGGGCTTGGTAGCTCTGGGATTTGCCTTCCTTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CAA 90 bp | TCAGCACTACAGCTAAACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGTGCCATGAGAGATCCTaGGTCCAGTGGGGTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SALQLNPKYPQISMTIVMCHERS*VQWGEP Trigger: GGGCTCACCCCACTGGACCAAGGATCTCTCATGGCA...CATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTTTAGCTGTAGTGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCTGCGGCACTTGAAAAACCCAATGGATCTTCCACTCTTTCCCCATCTTCCCTGATTGTGTGTACTTaGAGTTTCTTTCCCAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPAALEKPNGSSTLSPSSLIVCT*SFFPSP Trigger: AGGGCTGGGAAAGAAACTCAAAGTACACACAATCAG...GGAAGATGGGGAAAGAGTGGAAGATCCATTGGGTTTTTCAAGTGCCGCAGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CCA 90 bp | GTAGTTTTCAATTTCACTGGCTGCCATGAGAGATCCTTGGTCCAGTaGGGTGAGCCCAAGAGTACGAGCAATGTCCATTACTCTTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VVFNFTGCHERSLVQ*GEPKSTSNVHYSLF Trigger: AAACAAAGAGTAATGGACATTGCTCGTACTCTTGGGCTCACCCCACTGGACCAAGGATCTCTCATGGCAGCCAGTGAAATTGAAAACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CAA 90 bp | AACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGATCACCACTTCTTCCATGCGAGTGAGGGTCTaGTCTATGCATGGCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: NPKYPQISMTIVMITTSSMRVRV*SMHGMM Trigger: CATCATGCCATGCATAGACAAGACCCTCACTCGCAT...GGAAGAAGTGGTGATCATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CAA 90 bp | ACAGCTAAACCCCAAATACCCCCAGATCAGTATGACAATAGTTATGATCACCACAAGGAAACCTCCACATaGGAAATAGTTGCAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TAKPQIPPDQYDNSYDHHKETST*EIVAEG Trigger: ACCCTCTGCAACTATTTCCAATGTGGAGGTTTCCTT...GTGGTGATCATAACTATTGTCATACTGATCTGGGGGTATTTGGGGTTTAGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CAA 90 bp | TTTTCACTTACATCAGCCCTTGAATTAGGGAAGGAAGTTGCACACACTCTTCCAATATCACCTCTCGTATaGCACAGTACACAAAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSLTSALELGKEVAHTLPISPLV*HSTQRR Trigger: TCTTCTTTGTGTACTGTGCAATACGAGAGGTGATAT...TGGAAGAGTGTGTGCAACTTCCTTCCCTAATTCAAGGGCTGATGTAAGTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS-3UTR CAA 90 bp | GAAATGTATAATGAAGAAAGCACACCACCACTCCTAAATGATCCCAAACAGCATAATGTCCATTACTCTTaGTTTGGCCTTGCTGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: EMYNEESTPPLLNDPKQHNVHYS*FGLAVI Trigger: AATGACAGCAAGGCCAAACAAAGAGTAATGGACATT...ATGCTGTTTGGGATCATTTAGGAGTGGTGGTGTGCTTTCTTCATTATACATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CCA 72 bp | GCCCTGGCGGATGCGAGTGAGGGTCTTGTCTATGCATaGCATGATGAGGATGCACTTCAGCACCAGCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALADASEGLVYA*HDEDALQHQHC Trigger: GCAGTGCTGGTGCTGAAGTGCATCCTCATCATGCCATGCATAGACAAGACCCTCACTCGCATCCGCCAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS GCA 72 bp | GCATGGCATGATGAGGATGCACTTCAGCACCAGCACTaGGCAGGGGATGACGAGTGCCAAAATATAAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: AWHDEDALQHQH*AGDDECQNISR Trigger: TCGGCTTATATTTTGGCACTCGTCATCCCCTGCGCAGTGCTGGTGCTGAAGTGCATCCTCATCATGCCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CAA 72 bp | TTTCTTTCCCAGCCCTGGCGGATGCGAGTGAGGGTCTaGTCTATGCATGGCATGATGAGGATGCACTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLSQPWRMRVRV*SMHGMMRMHFS Trigger: GCTGAAGTGCATCCTCATCATGCCATGCATAGACAAGACCCTCACTCGCATCCGCCAGGGCTGGGAAAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CCA 72 bp | GCTGATTGTGTGTACTTTGAGTTTCTTTCCCAGCCCTaGCGGATGCGAGTGAGGGTCTTGTCTATGCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: ADCVYFEFLSQP*RMRVRVLSMHG Trigger: GCCATGCATAGACAAGACCCTCACTCGCATCCGCCAGGGCTGGGAAAGAAACTCAAAGTACACACAATCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CAA 72 bp | TCCAATGGTCAAGCCAGTTTGGGAATCGGCGGTACTTaGTGCCTCGATAGAGCTGCAGAATGGCAGCGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SNGQASLGIGGT*CLDRAAEWQRE Trigger: TTCTCGCTGCCATTCTGCAGCTCTATCGAGGCACAAAGTACCGCCGATTCCCAAACTGGCTTGACCATTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CAA 90 bp | GTCCAGTGGGGTGAGCCCAAGAGTACGAGCAATGTCCATTACTCTTaGTTTGGCCTTGCTGTCATTTCCACAGACAAACACCTGCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VQWGEPKSTSNVHYS*FGLAVISTDKHLPA Trigger: AGCCGGCAGGTGTTTGTCTGTGGAAATGACAGCAAGGCCAAACAAAGAGTAATGGACATTGCTCGTACTCTTGGGCTCACCCCACTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CAA 90 bp | TGCAAAGCATCCAATGGTCAAGCCAGTTTGGGAATCGGCGGTACTTaGTGCCTCGATAGAGCTGCAGAATGGCAGCGAGAATACCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CKASNGQASLGIGGT*CLDRAAEWQREYQG Trigger: TCCCTGGTATTCTCGCTGCCATTCTGCAGCTCTATCGAGGCACAAAGTACCGCCGATTCCCAAACTGGCTTGACCATTGGATGCTTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CAA 90 bp | CCAAGCCCAGTTGCTTTCTGCAAAGCATCCAATGGTCAAGCCAGTTaGGGAATCGGCGGTACTTTGTGCCTCGATAGAGCTGCAGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: PSPVAFCKASNGQAS*GIGGTLCLDRAAEW Trigger: CCATTCTGCAGCTCTATCGAGGCACAAAGTACCGCCGATTCCCAAACTGGCTTGACCATTGGATGCTTTGCAGAAAGCAACTGGGCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CAA 90 bp | TACTTTGAGTTTCTTTCCCAGCCCTGGCGGATGCGAGTGAGGGTCTaGTCTATGCATGGCATGATGAGGATGCACTTCAGCACCAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: YFEFLSQPWRMRVRV*SMHGMMRMHFSTST Trigger: AGTGCTGGTGCTGAAGTGCATCCTCATCATGCCATGCATAGACAAGACCCTCACTCGCATCCGCCAGGGCTGGGAAAGAAACTCAAAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS GCA 72 bp | AATGGTCAAGCCAGTTTGGGAATCGGCGGTACTTTGTaGCTCGATAGAGCTGCAGAATGGCAGCGAGAATAC | + |
|
Preference number: 6 (lower is better) Translates to: NGQASLGIGGTL*LDRAAEWQREY Trigger: GTATTCTCGCTGCCATTCTGCAGCTCTATCGAGGCACAAAGTACCGCCGATTCCCAAACTGGCTTGACCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS GCA 72 bp | GGAATCTCTTTCCGCCATACACCAAAGTGTGGGCTGTaGACAAGACCAGGGTCAGATAACCCAGTTTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: GISFRHTPKCGL*TRPGSDNPVWT Trigger: AGTCCAAACTGGGTTATCTGACCCTGGTCTTGTGCACAGCCCACACTTTGGTGTATGGCGGAAAGAGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CCA 72 bp | AATTTCACTGGCTGCCATGAGAGATCCTTGGTCCAGTaGGGTGAGCCCAAGAGTACGAGCAATGTCCATTAC | + |
|
Preference number: 6 (lower is better) Translates to: NFTGCHERSLVQ*GEPKSTSNVHY Trigger: GTAATGGACATTGCTCGTACTCTTGGGCTCACCCCACTGGACCAAGGATCTCTCATGGCAGCCAGTGAAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CAA 90 bp | TTGCAGAGGGTAGTTTTCAATTTCACTGGCTGCCATGAGAGATCCTaGGTCCAGTGGGGTGAGCCCAAGAGTACGAGCAATGTCCATTAC | + |
|
Preference number: 6 (lower is better) Translates to: LQRVVFNFTGCHERS*VQWGEPKSTSNVHY Trigger: GTAATGGACATTGCTCGTACTCTTGGGCTCACCCCACTGGACCAAGGATCTCTCATGGCAGCCAGTGAAATTGAAAACTACCCTCTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CAA 72 bp | GTAGTTTTCAATTTCACTGGCTGCCATGAGAGATCCTaGGTCCAGTGGGGTGAGCCCAAGAGTACGAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: VVFNFTGCHERS*VQWGEPKSTSN Trigger: ATTGCTCGTACTCTTGGGCTCACCCCACTGGACCAAGGATCTCTCATGGCAGCCAGTGAAATTGAAAACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CAA 72 bp | GTTGCTTTCTGCAAAGCATCCAATGGTCAAGCCAGTTaGGGAATCGGCGGTACTTTGTGCCTCGATAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VAFCKASNGQAS*GIGGTLCLDRA Trigger: AGCTCTATCGAGGCACAAAGTACCGCCGATTCCCAAACTGGCTTGACCATTGGATGCTTTGCAGAAAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CAA 90 bp | GTGAGCCCAAGAGTACGAGCAATGTCCATTACTCTTTGTTTGGCCTaGCTGTCATTTCCACAGACAAACACCTGCCGGCTTGCATCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: VSPRVRAMSITLCLA*LSFPQTNTCRLASS Trigger: ACTAGATGCAAGCCGGCAGGTGTTTGTCTGTGGAAATGACAGCAAGGCCAAACAAAGAGTAATGGACATTGCTCGTACTCTTGGGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CCA 72 bp | GCCCAAGAGTACGAGCAATGTCCATTACTCTTTGTTTaGCCTTGCTGTCATTTCCACAGACAAACACCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AQEYEQCPLLFV*PCCHFHRQTPA Trigger: GGCAGGTGTTTGTCTGTGGAAATGACAGCAAGGCCAAACAAAGAGTAATGGACATTGCTCGTACTCTTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS TCA 72 bp | GGGAATCATAGTGCTCTCTGTGCATGGCTAGGATTATaGTGTCAGACTTGGATGCTGCTTCCGAATAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GNHSALCAWLGL*CQTWMLLPNSS Trigger: TGAGCTATTCGGAAGCAGCATCCAAGTCTGACATCATAATCCTAGCCATGCACAGAGAGCACTATGATTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS GCA 72 bp | AATACCAGGGAGGTACACCAAGGCAAGCAGGATCAGTaGTGTTATAGGAAAGACACGATTCGGGATGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: NTREVHQGKQDQ*CYRKDTIRDGN Trigger: ATTTCCATCCCGAATCGTGTCTTTCCTATAACAGCACTGATCCTGCTTGCCTTGGTGTACCTCCCTGGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CAA 72 bp | GGTGAGCCCAAGAGTACGAGCAATGTCCATTACTCTTaGTTTGGCCTTGCTGTCATTTCCACAGACAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: GEPKSTSNVHYS*FGLAVISTDKH Trigger: GTGTTTGTCTGTGGAAATGACAGCAAGGCCAAACAAAGAGTAATGGACATTGCTCGTACTCTTGGGCTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS CAA 72 bp | TTTTCCCATTCACGTAGGGGTATATCACCTCTCGTATaGCACAGTACACAAAGAAGAAGACGCACAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: FSHSRRGISPLV*HSTQRRRRTAQ Trigger: CTGTGCTGTGCGTCTTCTTCTTTGTGTACTGTGCAATACGAGAGGTGATATACCCCTACGTGAATGGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS TCA 72 bp | GATAGAATAGCCACACTGAAGCATTTTCAATCCCAGTaGCTTCCCGAAATCTCCTGTTCCGAAAATGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: DRIATLKHFQSQ*LPEISCSENAD Trigger: GTCTGCATTTTCGGAACAGGAGATTTCGGGAAGTCACTGGGATTGAAAATGCTTCAGTGTGGCTATTCTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||
| CDS TCA 72 bp | GAGGTAATAAATGGGCTGTCTTTATTAGTTAGGGCCTaGGTAATGGTTGCATTTCTCAGCCTCCATCGAACA | + |
|
Preference number: 6 (lower is better) Translates to: EVINGLSLLVRA*VMVAFLSLHRT Trigger: TGTTCGATGGAGGCTGAGAAATGCAACCATTACTCAGGCCCTAACTAATAAAGACAGCCCATTTATTACCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115421.3 |
||