Pregenerated sensors for STEAP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015653Ensembl transcript IDs: ENSMUST00000015797.11, ENSMUST00000115424.9, ENSMUST00000115425.9, ENSMUST00000115426.9, ENSMUST00000115427.8, ENSMUST00000148333.8, ENSMUST00000164219.8
Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGTGAAGCCAGTCCTCAGCAGCTCAAGGGTGAGGAAAAGACCGTaGAGGACGAACATCTGTGAACTGTCGGACAGAGCACCTGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: TVKPVLSSSRVRKRP*RTNICELSDRAPAL Trigger: CAAGGCAGGTGCTCTGTCCGACAGTTCACAGATGTTCGTCCTTCACGGTCTTTTCCTCACCCTTGAGCTGCTGAGGACTGGCTTCACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR GCA 90 bp | AATCCAATCTCTCCTTCTGCTGAAAACTTACTGCAGGTTTCAGACTaGAGGACTGCCAATCAACAGCCCGCTGACAGGGACCAAGGCGAG | + |
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Preference number: 1 (lower is better) Translates to: NPISPSAENLLQVSD*RTANQQPADRDQGE Trigger: CTCGCCTTGGTCCCTGTCAGCGGGCTGTTGATTGGCAGTCCTGCAGTCTGAAACCTGCAGTAAGTTTTCAGCAGAAGGAGAGATTGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR GCA 90 bp | CGTGAAGGACGAACATCTGTGAACTGTCGGACAGAGCACCTGCCTTaGTTTGTGTGTTTAGTCAACAGGAGAGTCCCTAAGCTACCAGGA | + |
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Preference number: 1 (lower is better) Translates to: REGRTSVNCRTEHLP*FVCLVNRRVPKLPG Trigger: TCCTGGTAGCTTAGGGACTCTCCTGTTGACTAAACACACAAAGCAAGGCAGGTGCTCTGTCCGACAGTTCACAGATGTTCGTCCTTCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR TCA 90 bp | CCGTGGGTCCTGACGAATGACTCCCTAGGATGGCTGCTCACTGTGTaGCCTCAGGAAAATTTAATTCTTCTGTCCTTCAGTTTTCCATAT | + |
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Preference number: 1 (lower is better) Translates to: PWVLTNDSLGWLLTV*PQENLILLSFSFPY Trigger: ATATGGAAAACTGAAGGACAGAAGAATTAAATTTTCCTGAGGTCACACAGTGAGCAGCCATCCTAGGGAGTCATTCGTCAGGACCCACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR TCA 90 bp | TTAGAGTTGCCAGCCTACAAACTAATCACCTCTGAAATTTATACATaGCAAATGGAACAGAAAAGACAAGTAGAACAGCTACCCCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: LELPAYKLITSEIYT*QMEQKRQVEQLPLK Trigger: CTTCAGGGGTAGCTGTTCTACTTGTCTTTTCTGTTCCATTTGTCATGTATAAATTTCAGAGGTGATTAGTTTGTAGGCTGGCAACTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| 3UTR GCA 90 bp | GAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGTaGCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: ESIRLLLHTLDANVM*PFSIIYDYAFLLLK Trigger: TTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR GCA 90 bp | TTAGTCAACAGGAGAGTCCCTAAGCTACCAGGAAGATTCCTAGCCTaGCTGCATTGTGGAAATTTAGTGATTTGTAAAGTTAAAAACAAT | + |
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Preference number: 1 (lower is better) Translates to: LVNRRVPKLPGRFLA*LHCGNLVICKVKNN Trigger: ATTGTTTTTAACTTTACAAATCACTAAATTTCCACAATGCAGGCAGGCTAGGAATCTTCCTGGTAGCTTAGGGACTCTCCTGTTGACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR GCA 90 bp | TTGCTTTGTCGCGAATGTACAGAACAATTCTGCTGTCTTTCAGTCTaGTTGCACATCTCAAAAGCAGGATTTTATAGATTTATACAGGTA | + |
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Preference number: 1 (lower is better) Translates to: LLCRECTEQFCCLSV*LHISKAGFYRFIQV Trigger: TACCTGTATAAATCTATAAAATCCTGCTTTTGAGATGTGCAAGCAGACTGAAAGACAGCAGAATTGTTCTGTACATTCGCGACAAAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR GCA 90 bp | CAGGATTATTACAGTCTAACCTATTCAGGAATGTTAAATTTGTATTaGGAGAAAGAACTGGCAGGGCTAAAATTTACATTTCACGGAACC | + |
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Preference number: 1 (lower is better) Translates to: QDYYSLTYSGMLNLY*EKELAGLKFTFHGT Trigger: GGTTCCGTGAAATGTAAATTTTAGCCCTGCCAGTTCTTTCTCGCAATACAAATTTAACATTCCTGAATAGGTTAGACTGTAATAATCCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR CAA 90 bp | TCTCCTCAGCCTTTTCAGCATGATGCCCTGACCCTCTGGGGACAGTaGTTTACCCACAGCCTCGTCAGCCAGACTGAGGGCCCACGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SPQPFQHDALTLWGQ*FTHSLVSQTEGPRR Trigger: TCTTCGTGGGCCCTCAGTCTGGCTGACGAGGCTGTGGGTAAACAACTGTCCCCAGAGGGTCAGGGCATCATGCTGAAAAGGCTGAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR TCA 90 bp | TTCATGGGTTTCCTAACTGTGTGGCCATTAGGGGCTCGTCAGGAATGCAGAACTCCTGCATCTGCCTCCTaGGTGCTGAGACTAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: FMGFLTVWPLGARQECRTPASAS*VLRLKA Trigger: TGCCTTTAGTCTCAGCACTCAGGAGGCAGATGCAGG...AGTTCTGCATTCCTGACGAGCCCCTAATGGCCACACAGTTAGGAAACCCATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR GCA 90 bp | TTCATGGGTTTCCTAACTGTGTGGCCATTAGGGGCTCGTCAGGAATGCAGAACTCATGGGGAGGCTTTGTaGTACTATGGGTTTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: FMGFLTVWPLGARQECRTHGEAL*YYGFPG Trigger: GCCTGGAAACCCATAGTAGCACAAAGCCTCCCCATG...AGTTCTGCATTCCTGACGAGCCCCTAATGGCCACACAGTTAGGAAACCCATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR CCA 90 bp | TTCATGGGTTTCCTAACTGTGTGGCCATTAGGGGCTCGTCAGGAATGCAGAACTAACAGTCCTGAAGGCTaGAAAATCAAGACCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FMGFLTVWPLGARQECRTNSPEG*KIKTKA Trigger: AGCCTTGGTCTTGATTTTCCAGCCTTCAGGACTGTT...AGTTCTGCATTCCTGACGAGCCCCTAATGGCCACACAGTTAGGAAACCCATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR TCA 90 bp | TTCATGGGTTTCCTAACTGTGTGGCCATTAGGGGCTCGTCAGGAATGCAGAACTCCTGTCCCATTTTTATaGGAGCATAAGATTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: FMGFLTVWPLGARQECRTPVPFL*EHKIAP Trigger: AGGAGCAATCTTATGCTCTCATAAAAATGGGACAGG...AGTTCTGCATTCCTGACGAGCCCCTAATGGCCACACAGTTAGGAAACCCATGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR TCA 90 bp | TTCATGGGTTTCCTAACTGTGTGGCCATTAGGGGCTCGTCAGGAATGCAGAACTGGACCCCTGAAAAACTaGGCACTTTATAACACTCAT | + |
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Preference number: 2 (lower is better) Translates to: FMGFLTVWPLGARQECRTGPLKN*ALYNTH Trigger: ATGAGTGTTATAAAGTGCTCAGTTTTTCAGGGGTCC...AGTTCTGCATTCCTGACGAGCCCCTAATGGCCACACAGTTAGGAAACCCATGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR GCA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGCGTATTCAGAGTACCTaGTTGGGAGGTCAAGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRRIQST*LGGQVL Trigger: CAACACTTGACCTCCCAAGCAGGTACTCTGAATACG...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATGTTCACTCCCTTAAAGAGGACAACGAGTCCGTaGTCTGACCCCACATCCATC | + |
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Preference number: 2 (lower is better) Translates to: SLVLLKTNIRKHMFTPLKRTTSP*SDPTSI Trigger: GATGGATGTGGGGTCAGAGCACGGACTCGTTGTCCT...CTTTAAGGGAGTGAACATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR CCA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTCCTAAAGTAATGGCATaGATGGAAGTGTGTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPPKVMA*MEVCVA Trigger: AGCCACACACACTTCCATCCATGCCATTACTTTAGG...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR CCA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGCGAGAATGTAGTACATaGAGATGGATCGGGGGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: AIFQASSTRIGKQTMVGKRECST*RWIGGC Trigger: ACAACCCCCGATCCATCTCCATGTACTACATTCTCG...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR CCA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGGGCTTTGTGCTACTATaGGTTTCCAGGCAACTATGG | + |
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Preference number: 2 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRGFVLL*VSRQLW Trigger: CCATAGTTGCCTGGAAACCCATAGTAGCACAAAGCC...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR CCA 90 bp | TCGTCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATGTTCACTCCCTTATCGGTCTGCACTGCATaGGGAGGCTTTGTGCTACTA | + |
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Preference number: 2 (lower is better) Translates to: SSLVLLKTNIRKHMFTPLSVCTA*GGFVLL Trigger: TAGTAGCACAAAGCCTCCCCATGCAGTGCAGACCGA...TAAGGGAGTGAACATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR TCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCAATCTCTCCTTCTGCTaGAAACTTACTGCAGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSNLSFC*KLTAGF Trigger: GAAACCTGCAGTAAGTTTTCAGCAGAAGGAGAGATT...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR TCA 90 bp | TTCATGGGTTTCCTAACTGTGTGGCCATTAGGGGCTCGTCAGGAATGCAGAACTCTTTTAGATATCCTTTaGTGCACACGACATACTCCA | + |
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Preference number: 2 (lower is better) Translates to: FMGFLTVWPLGARQECRTLLDIL*CTRHTP Trigger: TGGAGTATGTCGTGTGCATCAAAGGATATCTAAAAG...AGTTCTGCATTCCTGACGAGCCCCTAATGGCCACACAGTTAGGAAACCCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR CCA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGCCTAAAGTAATGGCATaGATGGAAGTGTGTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: AIFQASSTRIGKQTMVGKPKVMA*MEVCVA Trigger: AGCCACACACACTTCCATCCATGCCATTACTTTAGG...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR TCA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGAATCTCTCCTTCTGCTaGAAACTTACTGCAGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRNLSFC*KLTAGF Trigger: GAAACCTGCAGTAAGTTTTCAGCAGAAGGAGAGATT...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR CCA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGTCCATACTCCCTCAGTaGATGTCGATAAAATCCACA | + |
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Preference number: 2 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRSILPQ*MSIKST Trigger: TGTGGATTTTATCGACATCCACTGAGGGAGTATGGA...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAAGTTATGCTTATTTATAAGAATCCAGCAGTTACACATGGACACATCAGCACTCGCGGTGATGGCCTaGAACTCACAGTGTGGACCA | + |
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Preference number: 2 (lower is better) Translates to: LKLCLFIRIQQLHMDTSALAVMA*NSQCGP Trigger: TGGTCCACACTGTGAGTTCCAGGCCATCACCGCGAG...TGCTGATGTGTCCATGTGTAACTGCTGGATTCTTATAAATAAGCATAACTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAATTACAAAGACAGAATAGATGCTGGAACTTGTCCTGCTGAATTCAGAGCAGGGTGCCTTACACTGTaGGTGCTATTGCTTTGTCGC | + |
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Preference number: 2 (lower is better) Translates to: VNYKDRIDAGTCPAEFRAGCLTL*VLLLCR Trigger: GCGACAAAGCAATAGCACCCACAGTGTAAGGCACCC...TGCTCTGAATTCAGCAGGACAAGTTCCAGCATCTATTCTGTCTTTGTAATTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAAGTTATGCTTATTTATAAGAATCCAGCAGTTACACATGGACACATCAGCACCTGCATCTGCCTCCTaGGTGCTGAGACTAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LKLCLFIRIQQLHMDTSAPASAS*VLRLKA Trigger: TGCCTTTAGTCTCAGCACTCAGGAGGCAGATGCAGG...TGCTGATGTGTCCATGTGTAACTGCTGGATTCTTATAAATAAGCATAACTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR GCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAACTGCAGGTTTCAGACTaGAGGACTGCCAATCAACAG | + |
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Preference number: 2 (lower is better) Translates to: PIDINRKMEGFCNVIETKLQVSD*RTANQQ Trigger: CTGTTGATTGGCAGTCCTGCAGTCTGAAACCTGCAG...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR GCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGCTGCAGGTTTCAGACTaGAGGACTGCCAATCAACAG | + |
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Preference number: 2 (lower is better) Translates to: HFYESIRLLLHTLDANVMLQVSD*RTANQQ Trigger: CTGTTGATTGGCAGTCCTGCAGTCTGAAACCTGCAG...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR GCA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGAGCTCTCGTGAGTTATaGATTGGTATGTTGTATCTC | + |
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Preference number: 2 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRSSREL*IGMLYL Trigger: GAGATACAACATACCAATGCATAACTCACGAGAGCT...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR TCA 90 bp | CACTCCCATCATTTCGTCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATCCTGTCCCATTTTTATaGGAGCATAAGATTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: HSHHFVSCPTQDKHQETHPVPFL*EHKIAP Trigger: AGGAGCAATCTTATGCTCTCATAAAAATGGGACAGG...ATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGACGAAATGATGGGAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR TCA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCACACAGGAAGGGTGGTaGCTGGCCAAAGTAACATAT | + |
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Preference number: 2 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSTQEGW*LAKVTY Trigger: ATATGTTACTTTGGCCAGTCACCACCCTTCCTGTGT...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR GCA 90 bp | GTAAGATTTATAGGATATTGCCATGAAGGTCTGCTGAATTGCATTTTGGAACATCATGGGGAGGCTTTGTaGTACTATGGGTTTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: VRFIGYCHEGLLNCILEHHGEAL*YYGFPG Trigger: GCCTGGAAACCCATAGTAGCACAAAGCCTCCCCATG...ATGTTCCAAAATGCAATTCAGCAGACCTTCATGGCAATATCCTATAAATCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR CCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCCCCAACTATGCAATATaGTTAAAAGAACAACAGTGT | + |
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Preference number: 2 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSPNYAI*LKEQQC Trigger: ACACTGTTGTTCTTTTAACCATATTGCATAGTTGGG...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCGGCTTTGTGCTACTATaGGTTTCCAGGCAACTATGG | + |
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Preference number: 2 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSGFVLL*VSRQLW Trigger: CCATAGTTGCCTGGAAACCCATAGTAGCACAAAGCC...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR CCA 90 bp | GTAAGATTTATAGGATATTGCCATGAAGGTCTGCTGAATTGCATTTTGGAACATAGAGCAGTGGAAGGTTaGGCACCTCATGTTCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: VRFIGYCHEGLLNCILEHRAVEG*APHVPD Trigger: GTCAGGAACATGAGGTGCCCAACCTTCCACTGCTCT...ATGTTCCAAAATGCAATTCAGCAGACCTTCATGGCAATATCCTATAAATCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR TCA 90 bp | TACATGACAAATGGAACAGAAAAGACAAGTAGAACAGCTACCCCTGAAGTCAGATGGCTGCTCACTGTGTaGCCTCAGGAAAATTTAATT | + |
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Preference number: 2 (lower is better) Translates to: YMTNGTEKTSRTATPEVRWLLTV*PQENLI Trigger: AATTAAATTTTCCTGAGGTCACACAGTGAGCAGCCA...TCTGACTTCAGGGGTAGCTGTTCTACTTGTCTTTTCTGTTCCATTTGTCATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR GCA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGCTGCAGGTTTCAGACTaGAGGACTGCCAATCAACAG | + |
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Preference number: 2 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLLQVSD*RTANQQ Trigger: CTGTTGATTGGCAGTCCTGCAGTCTGAAACCTGCAG...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR GCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGCTGCTGAAAACTTACTaGAGGTTTCAGACTGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: HFYESIRLLLHTLDANVMLLKTY*RFQTAG Trigger: TCCTGCAGTCTGAAACCTGCAGTAAGTTTTCAGCAG...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR-3UTR GCA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGCAACAGTGTTACAGTTaGACAAAGGAAATTTCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: AIFQASSTRIGKQTMVGKQQCYS*TKEISR Trigger: TCTAGAAATTTCCTTTGTGCAACTGTAACACTGTTG...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGTTTGTCTTTAATTTGTaGTCACATACTCACAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: AIFQASSTRIGKQTMVGKFVFNL*SHTHSA Trigger: AGCACTGTGAGTATGTGAGCACAAATTAAAGACAAA...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCATGTGGCTGTCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGAGCTCTCGTGAGTTATaGATTGGTATGTTGTATCTC | + |
|
Preference number: 2 (lower is better) Translates to: VMWLSMSVFYLKGCQSYWSSREL*IGMLYL Trigger: GAGATACAACATACCAATGCATAACTCACGAGAGCT...CCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGACAGCCACATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAACCTAAAGTAATGGCATaGATGGAAGTGTGTGTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: PIDINRKMEGFCNVIETKPKVMA*MEVCVA Trigger: AGCCACACACACTTCCATCCATGCCATTACTTTAGG...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGCCTAAAGTAATGGCATaGATGGAAGTGTGTGTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HFYESIRLLLHTLDANVMPKVMA*MEVCVA Trigger: AGCCACACACACTTCCATCCATGCCATTACTTTAGG...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATGTTCACTCCCTTAAAGTCCATACTCCCTCAGTaGATGTCGATAAAATCCACA | + |
|
Preference number: 2 (lower is better) Translates to: SLVLLKTNIRKHMFTPLKSILPQ*MSIKST Trigger: TGTGGATTTTATCGACATCCACTGAGGGAGTATGGA...CTTTAAGGGAGTGAACATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CAA 90 bp | GTCAGACTTCTCCATCCCAGAGGTCAGGCCTTTCAGCACTTAGAATaGCAAGGACTATATTACATTTATTCTAAAAACGAAAGCTATTCC | + |
|
Preference number: 2 (lower is better) Translates to: VRLLHPRGQAFQHLE*QGLYYIYSKNESYS Trigger: GGAATAGCTTTCGTTTTTAGAATAAATGTAATATAGTCCTTGCAATTCTAAGTGCTGAAAGGCCTGACCTCTGGGATGGAGAAGTCTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CAA 90 bp | CAGTGTGTAAATTGCGATGTTAATTTAATGCCTACTACTTTGCACTaGTTCAGTATGAATCTGTCACCAAGCCTCTCAACGCAATCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: QCVNCDVNLMPTTLH*FSMNLSPSLSTQSG Trigger: TCCAGATTGCGTTGAGAGGCTTGGTGACAGATTCATACTGAACAAGTGCAAAGTAGTAGGCATTAAATTAACATCGCAATTTACACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| 3UTR CAA 90 bp | AAAGAAAAAGGAACTGGCTGGGGCTTCCTCTATTTGCAAATGGACTaGGTGACAATTATTTGTTTCACAGCATTTCTCCTTAGAAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: KEKGTGWGFLYLQMD*VTIICFTAFLLRSA Trigger: TGCACTTCTAAGGAGAAATGCTGTGAAACAAATAATTGTCACCAAGTCCATTTGCAAATAGAGGAAGCCCCAGCCAGTTCCTTTTTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR TCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGAATCTCTCCTTCTGCTaGAAACTTACTGCAGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: HFYESIRLLLHTLDANVMNLSFC*KLTAGF Trigger: GAAACCTGCAGTAAGTTTTCAGCAGAAGGAGAGATT...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR TCA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCAATCTCTCCTTCTGCTaGAAACTTACTGCAGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSNLSFC*KLTAGF Trigger: GAAACCTGCAGTAAGTTTTCAGCAGAAGGAGAGATT...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR TCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAACCTGTCCCATTTTTATaGGAGCATAAGATTGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PIDINRKMEGFCNVIETKPVPFL*EHKIAP Trigger: AGGAGCAATCTTATGCTCTCATAAAAATGGGACAGG...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR TCA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCTGGCTGCTCACTGTGTaGCCTCAGGAAAATTTAATT | + |
|
Preference number: 2 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSWLLTV*PQENLI Trigger: AATTAAATTTTCCTGAGGTCACACAGTGAGCAGCCA...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACTCCAAAGACTGCCAATaGCTCTACCAGAAAGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHSKDCQ*LYQKGT Trigger: GGTTCCTTTCTGGTAGAGTCATTGGCAGTCTTTGGA...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR TCA 90 bp | TACAGTCTAACCTATTCAGGAATGTTAAATTTGTATTGCGAGAAAGAACTGGCATCCAAAGACTGCCAATaGCTCTACCAGAAAGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: YSLTYSGMLNLYCEKELASKDCQ*LYQKGT Trigger: GGTTCCTTTCTGGTAGAGTCATTGGCAGTCTTTGGA...TGCCAGTTCTTTCTCGCAATACAAATTTAACATTCCTGAATAGGTTAGACTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACAGAGTCCATTTCTCCTaGTCTGCTGTGTGTATGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHRVHFS*SAVCMG Trigger: TCCCATACACACAGCAGAGCAGGAGAAATGGACTCT...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGATTTATAGGATATTGCCATGAAGGTCTGCTGAATTGCATTTTGGAACATAGAGTCCATTTCTCCTaGTCTGCTGTGTGTATGGGA | + |
|
Preference number: 2 (lower is better) Translates to: VRFIGYCHEGLLNCILEHRVHFS*SAVCMG Trigger: TCCCATACACACAGCAGAGCAGGAGAAATGGACTCT...ATGTTCCAAAATGCAATTCAGCAGACCTTCATGGCAATATCCTATAAATCTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGAAGTTATGCTTATTTATAAGAATCCAGCAGTTACACATGGACACATCAGCACGAGAATGTAGTACATaGAGATGGATCGGGGGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: LKLCLFIRIQQLHMDTSARECST*RWIGGC Trigger: ACAACCCCCGATCCATCTCCATGTACTACATTCTCG...TGCTGATGTGTCCATGTGTAACTGCTGGATTCTTATAAATAAGCATAACTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATGTTCACTCCCTTAAAGAAAGAGCATGTCCACTaGGTAATGTTAAAAGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLVLLKTNIRKHMFTPLKKEHVH*VMLKAS Trigger: AGAAGCTTTTAACATTACTCAGTGGACATGCTCTTT...CTTTAAGGGAGTGAACATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGCTGCTGAAAACTTACTaGAGGTTTCAGACTGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLLLKTY*RFQTAG Trigger: TCCTGCAGTCTGAAACCTGCAGTAAGTTTTCAGCAG...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCATGTGGCTGTCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGTTTGTCTTTAATTTGTaGTCACATACTCACAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VMWLSMSVFYLKGCQSYWFVFNL*SHTHSA Trigger: AGCACTGTGAGTATGTGAGCACAAATTAAAGACAAA...CCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGACAGCCACATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTCCCATCATTTCGTCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATTATACAGTGTCTCACTaGATATGTATGTATGTATGC | + |
|
Preference number: 2 (lower is better) Translates to: HSHHFVSCPTQDKHQETHYTVSH*ICMYVC Trigger: GCATACATACATACATATGCAGTGAGACACTGTATA...ATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGACGAAATGATGGGAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTACAAAGACAGAATAGATGCTGGAACTTGTCCTGCTGAATTCAGAGCAGTGGACATGGCCACCTTATaGAAAATTTTAAAGAGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: NYKDRIDAGTCPAEFRAVDMATL*KILKSY Trigger: GTAGCTCTTTAAAATTTTCCATAAGGTGGCCATGTC...CACTGCTCTGAATTCAGCAGGACAAGTTCCAGCATCTATTCTGTCTTTGTAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CAA 90 bp | AATTTCCAGTGTGTAAATTGCGATGTTAATTTAATGCCTACTACTTaGCACTTGTTCAGTATGAATCTGTCACCAAGCCTCTCAACGCAA | + |
|
Preference number: 2 (lower is better) Translates to: NFQCVNCDVNLMPTT*HLFSMNLSPSLSTQ Trigger: TTGCGTTGAGAGGCTTGGTGACAGATTCATACTGAACAAGTGCAAAGTAGTAGGCATTAAATTAACATCGCAATTTACACACTGGAAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGAATCTCTCCTTCTGCTaGAAACTTACTGCAGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLNLSFC*KLTAGF Trigger: GAAACCTGCAGTAAGTTTTCAGCAGAAGGAGAGATT...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR TCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGAAAGAGCATGTCCACTaGGTAATGTTAAAAGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: HFYESIRLLLHTLDANVMKEHVH*VMLKAS Trigger: AGAAGCTTTTAACATTACTCAGTGGACATGCTCTTT...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGATTTATAGGATATTGCCATGAAGGTCTGCTGAATTGCATTTTGGAACATGGAAGATTCCTAGCCTaGCTGCATTGTGGAAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: VRFIGYCHEGLLNCILEHGRFLA*LHCGNL Trigger: TAAATTTCCACAATGCAGGCAGGCTAGGAATCTTCC...ATGTTCCAAAATGCAATTCAGCAGACCTTCATGGCAATATCCTATAAATCTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACGGAAGATTCCTAGCCTaGCTGCATTGTGGAAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHGRFLA*LHCGNL Trigger: TAAATTTCCACAATGCAGGCAGGCTAGGAATCTTCC...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCGACATGGCCACCTTATaGAAAATTTTAAAGAGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSDMATL*KILKSY Trigger: GTAGCTCTTTAAAATTTTCCATAAGGTGGCCATGTC...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTAATTACAAAGACAGAATAGATGCTGGAACTTGTCCTGCTGAATTCAGAGCATCAGGAAAAATTATTTaGCTGTCGTTACAGAGGACT | + |
|
Preference number: 2 (lower is better) Translates to: VNYKDRIDAGTCPAEFRASGKII*LSLQRT Trigger: AGTCCTCTGTAACGACAGCCAAATAATTTTTCCTGA...TGCTCTGAATTCAGCAGGACAAGTTCCAGCATCTATTCTGTCTTTGTAATTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGAAGTTATGCTTATTTATAAGAATCCAGCAGTTACACATGGACACATCAGCACTTTTAGATATCCTTTaGTGCACACGACATACTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LKLCLFIRIQQLHMDTSALLDIL*CTRHTP Trigger: TGGAGTATGTCGTGTGCATCAAAGGATATCTAAAAG...TGCTGATGTGTCCATGTGTAACTGCTGGATTCTTATAAATAAGCATAACTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGAAGTTATGCTTATTTATAAGAATCCAGCAGTTACACATGGACACATCAGCAGAGTCCTTTTATTTCTaGTGGTTGGATTCAAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LKLCLFIRIQQLHMDTSAESFYF*WLDSSQ Trigger: CTGACTTGAATCCAACCATCAGAAATAAAAGGACTC...TGCTGATGTGTCCATGTGTAACTGCTGGATTCTTATAAATAAGCATAACTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGCAACAGTGTTACAGTTaGACAAAGGAAATTTCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: HFYESIRLLLHTLDANVMQQCYS*TKEISR Trigger: TCTAGAAATTTCCTTTGTGCAACTGTAACACTGTTG...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAACAACAGTGTTACAGTTaGACAAAGGAAATTTCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: PIDINRKMEGFCNVIETKQQCYS*TKEISR Trigger: TCTAGAAATTTCCTTTGTGCAACTGTAACACTGTTG...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAATTTGTCTTTAATTTGTaGTCACATACTCACAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PIDINRKMEGFCNVIETKFVFNL*SHTHSA Trigger: AGCACTGTGAGTATGTGAGCACAAATTAAAGACAAA...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CAA 90 bp | TCAGGATTATTACAGTCTAACCTATTCAGGAATGTTAAATTTGTATaGCGAGAAAGAACTGGCAGGGCTAAAATTTACATTTCACGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: SGLLQSNLFRNVKFV*RERTGRAKIYISRN Trigger: GTTCCGTGAAATGTAAATTTTAGCCCTGCCAGTTCTTTCTCGCAATACAAATTTAACATTCCTGAATAGGTTAGACTGTAATAATCCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAGTCTAACCTATTCAGGAATGTTAAATTTGTATTGCGAGAAAGAACTGGCAATGTATGTATGTATGTaGTATACAGTGTCTCACTGC | + |
|
Preference number: 2 (lower is better) Translates to: YSLTYSGMLNLYCEKELAMYVCM*YTVSHC Trigger: GCAGTGAGACACTGTATAGCACATACATACATACAT...TGCCAGTTCTTTCTCGCAATACAAATTTAACATTCCTGAATAGGTTAGACTGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAGTCTAACCTATTCAGGAATGTTAAATTTGTATTGCGAGAAAGAACTGGCACAACAGTGTTACAGTTaGACAAAGGAAATTTCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: YSLTYSGMLNLYCEKELAQQCYS*TKEISR Trigger: TCTAGAAATTTCCTTTGTGCAACTGTAACACTGTTG...TGCCAGTTCTTTCTCGCAATACAAATTTAACATTCCTGAATAGGTTAGACTGTA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGAGGACAGGGCAGCTCTGGGCCACTGGACAGGAGGCAAGCCAAAAAGGGAGGGAGAAGCAGAGGCTaGTCTGTTCGCTATTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LGGQGSSGPLDRRQAKKGGRSRG*SVRYSL Trigger: GAGAGAATAGCGAACAGACAAGCCTCTGCTTCTCCC...TCCCTTTTTGGCTTGCCTCCTGTCCAGTGGCCCAGAGCTGCCCTGTCCTCCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CCA 72 bp | TCTCCTCAGCCTTTTCAGCATGATGCCCTGACCCTCTaGGGACAGTTGTTTACCCACAGCCTCGTCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SPQPFQHDALTL*GQLFTHSLVSQ Trigger: CTGGCTGACGAGGCTGTGGGTAAACAACTGTCCCCAGAGGGTCAGGGCATCATGCTGAAAAGGCTGAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | CGCTATTCTCTCCTCAGCCTTTTCAGCATGATGCCCTaGCCCTCTGGGGACAGTTGTTTACCCACAGCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: RYSLLSLFSMMP*PSGDSCLPTAS Trigger: CGAGGCTGTGGGTAAACAACTGTCCCCAGAGGGTCAGGGCATCATGCTGAAAAGGCTGAGGAGAGAATAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGAGGACAGGGCAGCTCTGGGCCACTGGACAGGAGGCAAGCCAAAAAGGGATGTCTTTCAGTCTGCTaGCACATCTCAAAAGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGGQGSSGPLDRRQAKKGCLSVC*HISKAG Trigger: TCCTGCTTTTGAGATGTGCAAGCAGACTGAAAGACA...TCCCTTTTTGGCTTGCCTCCTGTCCAGTGGCCCAGAGCTGCCCTGTCCTCCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | CCAGTCCTCAGCAGCTCAAGGGTGAGGAAAAGACCGTaGAGGACGAACATCTGTGAACTGTCGGACAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PVLSSSRVRKRP*RTNICELSDRA Trigger: TGCTCTGTCCGACAGTTCACAGATGTTCGTCCTTCACGGTCTTTTCCTCACCCTTGAGCTGCTGAGGACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR GCA 72 bp | TCTCCTTCTGCTGAAAACTTACTGCAGGTTTCAGACTaGAGGACTGCCAATCAACAGCCCGCTGACAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SPSAENLLQVSD*RTANQQPADRD Trigger: GTCCCTGTCAGCGGGCTGTTGATTGGCAGTCCTGCAGTCTGAAACCTGCAGTAAGTTTTCAGCAGAAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR GCA 72 bp | TGGACCAGGCTCATCTCTAACTCACAGAGAACAGCCTaGATCTGCCTCCTGAGTGCTGAGACTAAAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: WTRLISNSQRTA*ICLLSAETKGM Trigger: CATGCCTTTAGTCTCAGCACTCAGGAGGCAGATGCAGGCTGTTCTCTGTGAGTTAGAGATGAGCCTGGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR GCA 72 bp | CATCTTCATGCAGATCCACGCAGAGTCCATTTCTCCTaGTCTGCTGTGTGTATGGGACCCTTCCACATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLHADPRRVHFS*SAVCMGPFHMK Trigger: CTTCATGTGGAAGGGTCCCATACACACAGCAGAGCAGGAGAAATGGACTCTGCGTGGATCTGCATGAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | GCCAGTCAACAGCTCCACTTGAGCCTGCCTGTTTTCTaGGCCCTTCATAAACACACAGTGGGCATCACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ASQQLHLSLPVF*ALHKHTVGITL Trigger: TAAAGTGATGCCCACTGTGTGTTTATGAAGGGCTCAGAAAACAGGCAGGCTCAAGTGGAGCTGTTGACTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| 3UTR GCA 72 bp | CGAACATCTGTGAACTGTCGGACAGAGCACCTGCCTTaGTTTGTGTGTTTAGTCAACAGGAGAGTCCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: RTSVNCRTEHLP*FVCLVNRRVPK Trigger: CTTAGGGACTCTCCTGTTGACTAAACACACAAAGCAAGGCAGGTGCTCTGTCCGACAGTTCACAGATGTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CCA 72 bp | GGAACTTGTCCTGCTGAATTCAGAGCAGTGGAAGGTTaGGCACCTCATGTTCCTGACATCACACAGAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: GTCPAEFRAVEG*APHVPDITQNH Trigger: ATGGTTCTGTGTGATGTCAGGAACATGAGGTGCCCAACCTTCCACTGCTCTGAATTCAGCAGGACAAGTTCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | AAGCATGTATGTATGTACTTAGAAAGTGTCTCGCGGTaGTGGCCTGGAACTCACAGTGTGGACCAGGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: KHVCMYLESVSR*WPGTHSVDQAH Trigger: ATGAGCCTGGTCCACACTGTGAGTTCCAGGCCATCACCGCGAGACACTTTCTAAGTACATACATACATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR GCA 72 bp | AACACTGGACTGGGTGCCTTACACTGTGGGTGCTATTaGTTTGTCGCGAATGTACAGAACAATTCTGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: NTGLGALHCGCY*FVANVQNNSAV Trigger: GACAGCAGAATTGTTCTGTACATTCGCGACAAAGCAATAGCACCCACAGTGTAAGGCACCCAGTCCAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CCA 72 bp | ATGTATGTACTTAGAAAGTGTCTCGCGGTGATGGCCTaGAACTCACAGTGTGGACCAGGCTCATCTCTAACT | + |
|
Preference number: 3 (lower is better) Translates to: MYVLRKCLAVMA*NSQCGPGSSLT Trigger: AGTTAGAGATGAGCCTGGTCCACACTGTGAGTTCCAGGCCATCACCGCGAGACACTTTCTAAGTACATACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CCA 72 bp | ATGTTCCTGACATCACACAGAACCATAACACTGGACTaGGTGCCTTACACTGTGGGTGCTATTGCTTTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: MFLTSHRTITLD*VPYTVGAIALS Trigger: CGACAAAGCAATAGCACCCACAGTGTAAGGCACCCAGTCCAGTGTTATGGTTCTGTGTGATGTCAGGAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | CAGTGGATGTCGATAAAATCCACACAGGAAGGGTGGTaGCTGGCCAAAGTAACATATAGACTGACGTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QWMSIKSTQEGW*LAKVTYRLTCD Trigger: GTCACACGTCAGTCTATATGTTACTTTGGCCAGTCACCACCCTTCCTGTGTGGATTTTATCGACATCCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CCA 72 bp | GCCTGCCTGTTTTCTGAGCCCTTCATAAACACACAGTaGGCATCACTTTATTTGGGACTGTTGTTTCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ACLFSEPFINTQ*ASLYLGLLFLR Trigger: CCTCAGAAACAACAGTCCCAAATAAAGTGATGCCCACTGTGTGTTTATGAAGGGCTCAGAAAACAGGCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| 3UTR CCA 72 bp | CTACTCAAAGTGGTTTTCATGGGTTTCCTAACTGTGTaGCCATTAGGGGCTCGTCAGGAATGCAGAACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLKVVFMGFLTV*PLGARQECRTL Trigger: CAAAGTTCTGCATTCCTGACGAGCCCCTAATGGCCACACAGTTAGGAAACCCATGAAAACCACTTTGAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTTAAAATCTTTAGCCTaGGGGAAAGAGCATGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPLKSLA*GKEHVH Trigger: GTGGACATGCTCTTTCCCCAAGGCTAAAGATTTTAA...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | CTGACGAATGACTCCCTAGGATGGCTGCTCACTGTGTaGCCTCAGGAAAATTTAATTCTTCTGTCCTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LTNDSLGWLLTV*PQENLILLSFS Trigger: ACTGAAGGACAGAAGAATTAAATTTTCCTGAGGTCACACAGTGAGCAGCCATCCTAGGGAGTCATTCGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | TTACAAAGACAGAATAGATGCTGGAACTTGTCCTGCTaGATTCAGAGCAGTGGAAGGTTGGGCACCTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: LQRQNRCWNLSC*IQSSGRLGTSC Trigger: ACATGAGGTGCCCAACCTTCCACTGCTCTGAATTCAGCAGGACAAGTTCCAGCATCTATTCTGTCTTTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR GCA 72 bp | AAGAGAATCCAATCTCTCCTTCTGCTGAAAACTTACTaGAGGTTTCAGACTGCAGGACTGCCAATCAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: KRIQSLLLLKTY*RFQTAGLPINS Trigger: GCTGTTGATTGGCAGTCCTGCAGTCTGAAACCTGCAGTAAGTTTTCAGCAGAAGGAGAGATTGGATTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGTCTAACCTATTCAGGAATGTTAAATTTGTATTGCGAGAAAGAACTGGCAACCCTCTGGGGACAGTaGTTTACCCACAGCCTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: YSLTYSGMLNLYCEKELATLWGQ*FTHSLV Trigger: GACGAGGCTGTGGGTAAACAACTGTCCCCAGAGGGT...TGCCAGTTCTTTCTCGCAATACAAATTTAACATTCCTGAATAGGTTAGACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCATGGGTTTCCTAACTGTGTGGCCATTAGGGGCTCGTCAGGAATGCAGAACTAATGTTAAATTTGTATaGCGAGAAAGAACTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FMGFLTVWPLGARQECRTNVKFV*RERTGR Trigger: CCTGCCAGTTCTTTCTCGCAATACAAATTTAACATT...AGTTCTGCATTCCTGACGAGCCCCTAATGGCCACACAGTTAGGAAACCCATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | TATTTCATACTCCATTTGCCAGTCAACAGCTCCACTTaGGCCTGCCTGTTTTCTGAGCCCTTCATAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: YFILHLPVNSST*ACLFSEPFINT Trigger: TGTGTTTATGAAGGGCTCAGAAAACAGGCAGGCTCAAGTGGAGCTGTTGACTGGCAAATGGAGTATGAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| 3UTR CCA 72 bp | GGAGATGTAGGTAGGCATGTTTGTGAATACCTTGTCTaGTTCCAGTTTGCCTTTATAGTGAGTTCCCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: GDVGRHVCEYLV*FQFAFIVSSHV Trigger: CACATGGGAACTCACTATAAAGGCAAACTGGAACCAGACAAGGTATTCACAAACATGCCTACCTACATCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | CTCAGGAAAAATTATTTGGCTGTCGTTACAGAGGACTaGGACGGGTTCTGTTTTCTACACTCCCATCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LRKNYLAVVTED*DGFCFLHSHHF Trigger: GAAATGATGGGAGTGTAGAAAACAGAACCCGTCTCAGTCCTCTGTAACGACAGCCAAATAATTTTTCCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | ACAGAAGTCTCACGCACTTCATACTCAGTCGCCTTGTaGTCTCTTCATAGAGTACAAACTTCATGCTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: TEVSRTSYSVAL*SLHRVQTSCYH Trigger: ATGGTAGCATGAAGTTTGTACTCTATGAAGAGATCACAAGGCGACTGAGTATGAAGTGCGTGAGACTTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR GCA 72 bp | AGGAGAGTCCCTAAGCTACCAGGAAGATTCCTAGCCTaGCTGCATTGTGGAAATTTAGTGATTTGTAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RRVPKLPGRFLA*LHCGNLVICKV Trigger: AACTTTACAAATCACTAAATTTCCACAATGCAGGCAGGCTAGGAATCTTCCTGGTAGCTTAGGGACTCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | TGTATAATGGATGACATCCTTCCTGTCCCATTTTTATaGGAGCATAAGATTGCTCCTGCATACCCTAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: CIMDDILPVPFL*EHKIAPAYPRC Trigger: GCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATGGGACAGGAAGGATGTCATCCATTATACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR GCA 72 bp | GTGTCTCCTCAGTCAGGGTTTACCTTTCTTTCGGGATaGCATATTAGGAAAATAAAAAGGCCACGTAATATG | + |
|
Preference number: 3 (lower is better) Translates to: VSPQSGFTFLSG*HIRKIKRPRNM Trigger: CATATTACGTGGCCTTTTTATTTTCCTAATATGGCATCCCGAAAGAAAGGTAAACCCTGACTGAGGAGACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| 3UTR CCA 72 bp | CATGTTATATGGGTTTTTCCCTCAGGAAAAATTATTTaGCTGTCGTTACAGAGGACTGAGACGGGTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HVIWVFPSGKII*LSLQRTETGSV Trigger: AACAGAACCCGTCTCAGTCCTCTGTAACGACAGCCAAATAATTTTTCCTGAGGGAAAAACCCATATAACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGTCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATGTTCACTCCCTTAACTTTTAGATATCCTTaGATGCACACGACATACTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSLVLLKTNIRKHMFTPLTFRYP*MHTTYS Trigger: GGAGTATGTCGTGTGCATCAAAGGATATCTAAAAGT...TAAGGGAGTGAACATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAATTAAAATCTTTAGCCTaGGGGAAAGAGCATGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PIDINRKMEGFCNVIETKLKSLA*GKEHVH Trigger: GTGGACATGCTCTTTCCCCAAGGCTAAAGATTTTAA...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCTTAAAATCTTTAGCCTaGGGGAAAGAGCATGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSLKSLA*GKEHVH Trigger: GTGGACATGCTCTTTCCCCAAGGCTAAAGATTTTAA...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CAA 90 bp | AATTACAAAGACAGAATAGATGCTGGAACTTGTCCTGCTGAATTCAGAGCAGTGACCACACCCAGCTTGTaGGTATTTACTGTTAAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: NYKDRIDAGTCPAEFRAVTTPSL*VFTVKS Trigger: ACTTTTAACAGTAAATACCAACAAGCTGGGTGTGGT...CACTGCTCTGAATTCAGCAGGACAAGTTCCAGCATCTATTCTGTCTTTGTAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | GCTCGTCAGGAATGCAGAACTTTGCACCTCCTGGTGTaGATAATGCCCATTTTAACAAGTGTACATATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ARQECRTLHLLV*IMPILTSVHIK Trigger: TTTTATATGTACACTTGTTAAAATGGGCATTATTCACACCAGGAGGTGCAAAGTTCTGCATTCCTGACGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTAATTACAAAGACAGAATAGATGCTGGAACTTGTCCTGCTGAATTCAGAGCAACTTTTAGATATCCTTaGATGCACACGACATACTCC | + |
|
Preference number: 3 (lower is better) Translates to: VNYKDRIDAGTCPAEFRATFRYP*MHTTYS Trigger: GGAGTATGTCGTGTGCATCAAAGGATATCTAAAAGT...TGCTCTGAATTCAGCAGGACAAGTTCCAGCATCTATTCTGTCTTTGTAATTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR GCA 72 bp | CGCGAATGTACAGAACAATTCTGCTGTCTTTCAGTCTaGTTGCACATCTCAAAAGCAGGATTTTATAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: RECTEQFCCLSV*LHISKAGFYRF Trigger: AAATCTATAAAATCCTGCTTTTGAGATGTGCAAGCAGACTGAAAGACAGCAGAATTGTTCTGTACATTCGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | ATCAACTCTTTAGCTTTTGACACAGCAGTATCCCTATaGAGTGAAAACGTTCCTGCACATTTAGAACTATCA | + |
|
Preference number: 3 (lower is better) Translates to: INSLAFDTAVSL*SENVPAHLELS Trigger: TGATAGTTCTAAATGTGCAGGAACGTTTTCACTTCATAGGGATACTGCTGTGTCAAAAGCTAAAGAGTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| 3UTR GCA 72 bp | ACATCAAGTTGTATAAATTACCTCACTTCTGTGGATTaGATAGTCCTTGCATTTGTTATTGAAGTCTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: TSSCINYLTSVD*IVLAFVIEVCS Trigger: ACTGCAGACTTCAATAACAAATGCAAGGACTATGCAATCCACAGAAGTGAGGTAATTTATACAACTTGATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | AATAAAATTATGACTGAGATACTTTTAGATATCCTTTaGTGCACACGACATACTCCAAAGACTGCCAATGAC | + |
|
Preference number: 3 (lower is better) Translates to: NKIMTEILLDIL*CTRHTPKTAND Trigger: GTCATTGGCAGTCTTTGGAGTATGTCGTGTGCATCAAAGGATATCTAAAAGTATCTCAGTCATAATTTTATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | GTAAAGCTAATTGGTAAGATTTATAGGATATTGCCATaGAGGTCTGCTGAATTGCATTTTGGAACATTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VKLIGKIYRILP*RSAELHFGTFH Trigger: ATGGAATGTTCCAAAATGCAATTCAGCAGACCTTCATGGCAATATCCTATAAATCTTACCAATTAGCTTTAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| 3UTR TCA 72 bp | AATTTACTCATGCACTTTAAACAGTCTTTTTCATATTaGCTTAGAGTTGCCAGCCTACAAACTAATCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: NLLMHFKQSFSY*LRVASLQTNHL Trigger: GAGGTGATTAGTTTGTAGGCTGGCAACTCTAAGTCAATATGAAAAAGACTGTTTAAAGTGCATGAGTAAATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| 3UTR GCA 72 bp | TTTTCAATAGAAATGAGCCGTGTCCCTTTAAATATCTaGTGTAGAACAAACTGTATTAGACATGAGACACTT | + |
|
Preference number: 3 (lower is better) Translates to: FSIEMSRVPLNI*CRTNCIRHETL Trigger: AAGTGTCTCATGTCTAATACAGTTTGTTCTACAGCAGATATTTAAAGGGACACGGCTCATTTCTATTGAAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGAGGACAGGGCAGCTCTGGGCCACTGGACAGGAGGCAAGCCAAAAAGGGAACCCCCACGGTGACCTaGCTTGCGTCTTTGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGGQGSSGPLDRRQAKKGTPTVT*LASLIP Trigger: TGGTATCAAAGACGCAAGGCAGGTCACCGTGGGGGT...TCCCTTTTTGGCTTGCCTCCTGTCCAGTGGCCCAGAGCTGCCCTGTCCTCCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CAA 72 bp | CCTTTTCAGCATGATGCCCTGACCCTCTGGGGACAGTaGTTTACCCACAGCCTCGTCAGCCAGACTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFQHDALTLWGQ*FTHSLVSQTEG Trigger: GCCCTCAGTCTGGCTGACGAGGCTGTGGGTAAACAACTGTCCCCAGAGGGTCAGGGCATCATGCTGAAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTCACTGTGACCCTCTCTaGGGACAGATGAGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAHCDPL*GQMRNR Trigger: GCGGTTCCTCATCTGTCCCCAGAGAGGGTCACAGTG...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTACCCCCACGGTGACCTaGCTTGCGTCTTTGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVATPTVT*LASLIP Trigger: TGGTATCAAAGACGCAAGGCAGGTCACCGTGGGGGT...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTATGTGGCCAAGCTTATaGCTACTACCACTGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAMWPSL*LLPLAP Trigger: GGGGGCCAGTGGTAGTAGCCATAAGCTTGGCCACAT...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGAGGACAGGGCAGCTCTGGGCCACTGGACAGGAGGCAAGCCAAAAAGGGATGTTGCTCACATCAATaGGGATTTTGCCCACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGGQGSSGPLDRRQAKKGCCSHQ*GFCPQA Trigger: TGCTTGTGGGCAAAATCCTCATTGATGTGAGCAACA...TCCCTTTTTGGCTTGCCTCCTGTCCAGTGGCCCAGAGCTGCCCTGTCCTCCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTTATAAACCTGGCGGCTaGCATCCTTGGGACCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAYKPGG*HPWDLA Trigger: AGCTAGGTCCCAAGGATGCCAGCCGCCAGGTTTATA...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGGGCGGCTGGCATCCTTaGGACCTAGCTGAAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRGGWHP*DLAEVP Trigger: GGGCACTTCAGCTAGGTCCCAAGGATGCCAGCCGCC...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTGCTGATAAGCCATGTTaGGGAACAGGTATCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAADKPC*GTGIFP Trigger: CGGAAAGATACCTGTTCCTCAACATGGCTTATCAGC...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTCCTTCGTCTAGAAACTaGCTCTTTTCCCAGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAPSSRN*LFSQPF Trigger: AAAGGGCTGGGAAAAGAGCCAGTTTCTAGACGAAGG...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCCACTGTGACCCTCTCTaGGGACAGATGAGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSHCDPL*GQMRNR Trigger: GCGGTTCCTCATCTGTCCCCAGAGAGGGTCACAGTG...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCTCCTTGGGACCTAGCTaGAGTGCCCAAGCTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSSLGPS*SAQAEI Trigger: GATCTCAGCTTGGGCACTTCAGCTAGGTCCCAAGGA...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCCAAAGCGTTGCTCACTaGTGGGATGGAAGTGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSQSVAH*WDGSDR Trigger: GCGGTCACTTCCATCCCATCAGTGAGCAACGCTTTG...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTCACGGTGACCTGCCTTaGGTCTTTGATACCATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAHGDLP*VFDTIY Trigger: ATAAATGGTATCAAAGACGCAAGGCAGGTCACCGTG...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTGAATGGTCAGAGACTTaGCAAAATCCCCACTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAEWSET*QNPHFL Trigger: TAGGAAGTGGGGATTTTGCCAAGTCTCTGACCATTC...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTGGCAAGAACGAAGTTTaGTGGTGTGTAAAAGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAGKNEV*WCVKAV Trigger: TACCGCTTTTACACACCACCAAACTTCGTTCTTGCC...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGCACTGTGACCCTCTCTaGGGACAGATGAGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRHCDPL*GQMRNR Trigger: GCGGTTCCTCATCTGTCCCCAGAGAGGGTCACAGTG...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR GCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCAGCTGTTTCCTGCACTaGAGCCAAGTATCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSSCFLH*SQVSSH Trigger: GTGGCTGGATACTTGGCTGCAGTGCAGGAAACAGCT...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGGAACCGCTCCTCCCATaGCTTCGTCTAGAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AIFQASSTRIGKQTMVGKEPLLP*LRLETG Trigger: GCCAGTTTCTAGACGAAGGCATGGGAGGAGCGGTTC...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CCA 90 bp | TACATGACAAATGGAACAGAAAAGACAAGTAGAACAGCTACCCCTGAAGTCAGAGGCGGCTGGCATCCTTaGGACCTAGCTGAAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YMTNGTEKTSRTATPEVRGGWHP*DLAEVP Trigger: GGGCACTTCAGCTAGGTCCCAAGGATGCCAGCCGCC...TCTGACTTCAGGGGTAGCTGTTCTACTTGTCTTTTCTGTTCCATTTGTCATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTATAAACCTGGCGGCTaGCATCCTTGGGACCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPYKPGG*HPWDLA Trigger: AGCTAGGTCCCAAGGATGCCAGCCGCCAGGTTTATA...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTCTGGTTTCTGGCATATaGATGTATCACATCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVALVSGI*MYHISD Trigger: GTCAGAGATGTGATACATCCATATGCCAGAAACCAG...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTCACTCTGCTGGTTTCTaGCATATGGATGTATCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAHSAGF*HMDVSH Trigger: ATGTGATACATCCATATGCCAGAAACCAGCAGAGTG...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTGAGCTTGGATATTGTTaGTGCATATATAAACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAELGYC*CIYKPG Trigger: GCCAGGTTTATATATGCAGCAACAATATCCAAGCTC...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGAGCTGTTTCCTGCACTaGAGCCAAGTATCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRSCFLH*SQVSSH Trigger: GTGGCTGGATACTTGGCTGCAGTGCAGGAAACAGCT...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS-3UTR CCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAAGGCGGCTGGCATCCTTaGGACCTAGCTGAAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PIDINRKMEGFCNVIETKGGWHP*DLAEVP Trigger: GGGCACTTCAGCTAGGTCCCAAGGATGCCAGCCGCC...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGGGCGGCTGGCATCCTTaGGACCTAGCTGAAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMGGWHP*DLAEVP Trigger: GGGCACTTCAGCTAGGTCCCAAGGATGCCAGCCGCC...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCTATGGCTACTACCACTaGCCCCCTCCAGAGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSYGYYH*PPPESK Trigger: TTTACTCTCTGGAGGGGGCCAGTGGTAGTAGCCATA...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| 3UTR CAA 72 bp | CTGGACTGGGTGCCTTACACTGTGGGTGCTATTGCTTaGTCGCGAATGTACAGAACAATTCTGCTGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDWVPYTVGAIA*SRMYRTILLSF Trigger: GAAAGACAGCAGAATTGTTCTGTACATTCGCGACAAAGCAATAGCACCCACAGTGTAAGGCACCCAGTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR TCA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTTCAATCTCCTTGGCTaGCGACAAAGATCCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPFNLLG*RQRSQV Trigger: GACTTGGGATCTTTGTCGTCAGCCAAGGAGATTGAA...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR TCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCGCTGATAAGCCATGTTaGGGAACAGGTATCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSADKPC*GTGIFP Trigger: CGGAAAGATACCTGTTCCTCAACATGGCTTATCAGC...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCACAAGCCCAGGCTCATaGTGCCAAAGGAAATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSTSPGS*CQRKCT Trigger: TGTACATTTCCTTTGGCATCATGAGCCTGGGCTTGT...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTACAAGCCCAGGCTCATaGTGCCAAAGGAAATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPTSPGS*CQRKCT Trigger: TGTACATTTCCTTTGGCATCATGAGCCTGGGCTTGT...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | GTCATGTGGCTGTCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGACCCCCACGGTGACCTaGCTTGCGTCTTTGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: VMWLSMSVFYLKGCQSYWTPTVT*LASLIP Trigger: TGGTATCAAAGACGCAAGGCAGGTCACCGTGGGGGT...CCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGACAGCCACATGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS-3UTR GCA 90 bp | GTCATGTGGCTGTCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGGAACCGCTCCTCCCATaGCTTCGTCTAGAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VMWLSMSVFYLKGCQSYWEPLLP*LRLETG Trigger: GCCAGTTTCTAGACGAAGGCATGGGAGGAGCGGTTC...CCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGACAGCCACATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCGTTAAAGCATCTTCATaGTGGGTGACGTCTACCACG | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSVKASS*WVTSTT Trigger: CGTGGTAGACGTCACCCACCATGAAGATGCTTTAAC...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTGTTGCTCACATCAATaGGGATTTTGCCCACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPCCSHQ*GFCPQA Trigger: TGCTTGTGGGCAAAATCCTCATTGATGTGAGCAACA...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | TACATGACAAATGGAACAGAAAAGACAAGTAGAACAGCTACCCCTGAAGTCAGATCCTTGGGACCTAGCTaGAGTGCCCAAGCTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: YMTNGTEKTSRTATPEVRSLGPS*SAQAEI Trigger: GATCTCAGCTTGGGCACTTCAGCTAGGTCCCAAGGA...TCTGACTTCAGGGGTAGCTGTTCTACTTGTCTTTTCTGTTCCATTTGTCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGGCTGATAAGCCATGTTaGGGAACAGGTATCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AIFQASSTRIGKQTMVGKADKPC*GTGIFP Trigger: CGGAAAGATACCTGTTCCTCAACATGGCTTATCAGC...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGACAAGCCCAGGCTCATaGTGCCAAAGGAAATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRTSPGS*CQRKCT Trigger: TGTACATTTCCTTTGGCATCATGAGCCTGGGCTTGT...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTCACGGTGACCTGCCTTaGGTCTTTGATACCATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPHGDLP*VFDTIY Trigger: ATAAATGGTATCAAAGACGCAAGGCAGGTCACCGTG...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | GTCATGTGGCTGTCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGAGCTGTTTCCTGCACTaGAGCCAAGTATCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VMWLSMSVFYLKGCQSYWSCFLH*SQVSSH Trigger: GTGGCTGGATACTTGGCTGCAGTGCAGGAAACAGCT...CCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGACAGCCACATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTGGCTACGTGAACAACTaGAAAGAAGAAGCTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPGYVNN*KEEAQQ Trigger: TTGCTGAGCTTCTTCTTTGCAGTTGTTCACGTAGCC...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATGTTCACTCCCTTAAAGGAACCGCTCCTCCCATaGCTTCGTCTAGAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLVLLKTNIRKHMFTPLKEPLLP*LRLETG Trigger: GCCAGTTTCTAGACGAAGGCATGGGAGGAGCGGTTC...CTTTAAGGGAGTGAACATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTGAATGGTCAGAGACTTaGCAAAATCCCCACTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPEWSET*QNPHFL Trigger: TAGGAAGTGGGGATTTTGCCAAGTCTCTGACCATTC...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | TTCATGGGTTTCCTAACTGTGTGGCCATTAGGGGCTCGTCAGGAATGCAGAACTCTCTGCATTGGATTCTaGGTACTGGTTTACTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FMGFLTVWPLGARQECRTLCIGF*VLVYSH Trigger: ATGAGAGTAAACCAGTACCCAGAATCCAATGCAGAG...AGTTCTGCATTCCTGACGAGCCCCTAATGGCCACACAGTTAGGAAACCCATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | TCGTCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATGTTCACTCCCTTATATAAACCTGGCGGCTaGCATCCTTGGGACCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLVLLKTNIRKHMFTPLYKPGG*HPWDLA Trigger: AGCTAGGTCCCAAGGATGCCAGCCGCCAGGTTTATA...TAAGGGAGTGAACATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | TTCATGGGTTTCCTAACTGTGTGGCCATTAGGGGCTCGTCAGGAATGCAGAACTAGTTTTCAATCTCCTTaGCTGACGACAAAGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FMGFLTVWPLGARQECRTSFQSP*LTTKIP Trigger: TGGGATCTTTGTCGTCAGCCAAGGAGATTGAAAACT...AGTTCTGCATTCCTGACGAGCCCCTAATGGCCACACAGTTAGGAAACCCATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTAAAGAAAGAAAAATGTaGCCAAGCTTATGGCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAKERKM*PSLWLL Trigger: TAGTAGCCATAAGCTTGGCCACATTTTTCTTTCTTT...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | TTCATGGGTTTCCTAACTGTGTGGCCATTAGGGGCTCGTCAGGAATGCAGAACTCTGGTTTCTGGCATATaGATGTATCACATCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FMGFLTVWPLGARQECRTLVSGI*MYHISD Trigger: GTCAGAGATGTGATACATCCATATGCCAGAAACCAG...AGTTCTGCATTCCTGACGAGCCCCTAATGGCCACACAGTTAGGAAACCCATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTTGTTCACAATCTCAATaGGAATCTTGTAAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGPRRGPKVMAWMEVCVACSQSQ*ESCKSH Trigger: GTGACTTTTACAAGATTCCCATTGAGATTGTGAACA...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCGGCAAGAACGAAGTTTaGTGGTGTGTAAAAGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSGKNEV*WCVKAV Trigger: TACCGCTTTTACACACCACCAAACTTCGTTCTTGCC...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGCCTTCGTCTAGAAACTaGCTCTTTTCCCAGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AIFQASSTRIGKQTMVGKPSSRN*LFSQPF Trigger: AAAGGGCTGGGAAAAGAGCCAGTTTCTAGACGAAGG...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAACACTGTGACCCTCTCTaGGGACAGATGAGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: PIDINRKMEGFCNVIETKHCDPL*GQMRNR Trigger: GCGGTTCCTCATCTGTCCCCAGAGAGGGTCACAGTG...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCCACTGTGACCCTCTCTaGGGACAGATGAGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSHCDPL*GQMRNR Trigger: GCGGTTCCTCATCTGTCCCCAGAGAGGGTCACAGTG...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGTCCTTGGGACCTAGCTaGAGTGCCCAAGCTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMSLGPS*SAQAEI Trigger: GATCTCAGCTTGGGCACTTCAGCTAGGTCCCAAGGA...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAACAAAGCGTTGCTCACTaGTGGGATGGAAGTGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: PIDINRKMEGFCNVIETKQSVAH*WDGSDR Trigger: GCGGTCACTTCCATCCCATCAGTGAGCAACGCTTTG...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGCAAAGCGTTGCTCACTaGTGGGATGGAAGTGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMQSVAH*WDGSDR Trigger: GCGGTCACTTCCATCCCATCAGTGAGCAACGCTTTG...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGCACGGTGACCTGCCTTaGGTCTTTGATACCATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AIFQASSTRIGKQTMVGKHGDLP*VFDTIY Trigger: ATAAATGGTATCAAAGACGCAAGGCAGGTCACCGTG...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGCACGGTGACCTGCCTTaGGTCTTTGATACCATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRHGDLP*VFDTIY Trigger: ATAAATGGTATCAAAGACGCAAGGCAGGTCACCGTG...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAAACCCCCACGGTGACCTaGCTTGCGTCTTTGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: PIDINRKMEGFCNVIETKTPTVT*LASLIP Trigger: TGGTATCAAAGACGCAAGGCAGGTCACCGTGGGGGT...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGGAACCGCTCCTCCCATaGCTTCGTCTAGAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMEPLLP*LRLETG Trigger: GCCAGTTTCTAGACGAAGGCATGGGAGGAGCGGTTC...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAAGAACCGCTCCTCCCATaGCTTCGTCTAGAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PIDINRKMEGFCNVIETKEPLLP*LRLETG Trigger: GCCAGTTTCTAGACGAAGGCATGGGAGGAGCGGTTC...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCCTCTGCATTGGATTCTaGGTACTGGTTTACTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSLCIGF*VLVYSH Trigger: ATGAGAGTAAACCAGTACCCAGAATCCAATGCAGAG...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CCA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTCTCTGCATTGGATTCTaGGTACTGGTTTACTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPLCIGF*VLVYSH Trigger: ATGAGAGTAAACCAGTACCCAGAATCCAATGCAGAG...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTAGTTTTCAATCTCCTTaGCTGACGACAAAGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPSFQSP*LTTKIP Trigger: TGGGATCTTTGTCGTCAGCCAAGGAGATTGAAAACT...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCAGTTTTCAATCTCCTTaGCTGACGACAAAGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSSFQSP*LTTKIP Trigger: TGGGATCTTTGTCGTCAGCCAAGGAGATTGAAAACT...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGATGTGGCCAAGCTTATaGCTACTACCACTGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMMWPSL*LLPLAP Trigger: GGGGGCCAGTGGTAGTAGCCATAAGCTTGGCCACAT...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCCTGGTTTCTGGCATATaGATGTATCACATCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSLVSGI*MYHISD Trigger: GTCAGAGATGTGATACATCCATATGCCAGAAACCAG...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTCACTCTGCTGGTTTCTaGCATATGGATGTATCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPHSAGF*HMDVSH Trigger: ATGTGATACATCCATATGCCAGAAACCAGCAGAGTG...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGGGCAAGAACGAAGTTTaGTGGTGTGTAAAAGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AIFQASSTRIGKQTMVGKGKNEV*WCVKAV Trigger: TACCGCTTTTACACACCACCAAACTTCGTTCTTGCC...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGTACCCAGAATTACAATaGAGGGCAAAACGAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AIFQASSTRIGKQTMVGKYPELQ*RAKRGQ Trigger: TTGCCCTCGTTTTGCCCTCCATTGTAATTCTGGGTA...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCGAGCTTGGATATTGTTaGTGCATATATAAACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSELGYC*CIYKPG Trigger: GCCAGGTTTATATATGCAGCAACAATATCCAAGCTC...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAAAGCTGTTTCCTGCACTaGAGCCAAGTATCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PIDINRKMEGFCNVIETKSCFLH*SQVSSH Trigger: GTGGCTGGATACTTGGCTGCAGTGCAGGAAACAGCT...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCTTGGATTCTGGGTACTaGTTTACTCTCATGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSLDSGY*FTLMLL Trigger: CAACAACATGAGAGTAAACCAGTACCCAGAATCCAA...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGCTCTGCATTGGATTCTaGGTACTGGTTTACTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AIFQASSTRIGKQTMVGKLCIGF*VLVYSH Trigger: ATGAGAGTAAACCAGTACCCAGAATCCAATGCAGAG...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGCTCTGCATTGGATTCTaGGTACTGGTTTACTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRLCIGF*VLVYSH Trigger: ATGAGAGTAAACCAGTACCCAGAATCCAATGCAGAG...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGTATAAACCTGGCGGCTaGCATCCTTGGGACCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMYKPGG*HPWDLA Trigger: AGCTAGGTCCCAAGGATGCCAGCCGCCAGGTTTATA...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGACCTGCTGTCGAGCTTaGATATTGTTGCTGCATATA | + |
|
Preference number: 4 (lower is better) Translates to: AIFQASSTRIGKQTMVGKTCCRA*ILLLHI Trigger: TATATGCAGCAACAATATCCAAGCTCGACAGCAGGT...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GTCATGTGGCTGTCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGCCTTCGTCTAGAAACTaGCTCTTTTCCCAGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VMWLSMSVFYLKGCQSYWPSSRN*LFSQPF Trigger: AAAGGGCTGGGAAAAGAGCCAGTTTCTAGACGAAGG...CCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGACAGCCACATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | GGATGCCATATTAGGAAAATAAAAAGGCCACGTAATATGTGTCCCATTCTTAAATCCTTGGGACCTAGCTaGAGTGCCCAAGCTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GCHIRKIKRPRNMCPILKSLGPS*SAQAEI Trigger: GATCTCAGCTTGGGCACTTCAGCTAGGTCCCAAGGA...TTTAAGAATGGGACACATATTACGTGGCCTTTTTATTTTCCTAATATGGCATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | TACATGACAAATGGAACAGAAAAGACAAGTAGAACAGCTACCCCTGAAGTCAGATTCAATCTCCTTGGCTaGCGACAAAGATCCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YMTNGTEKTSRTATPEVRFNLLG*RQRSQV Trigger: GACTTGGGATCTTTGTCGTCAGCCAAGGAGATTGAA...TCTGACTTCAGGGGTAGCTGTTCTACTTGTCTTTTCTGTTCCATTTGTCATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGCAAAGCGTTGCTCACTaGTGGGATGGAAGTGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLQSVAH*WDGSDR Trigger: GCGGTCACTTCCATCCCATCAGTGAGCAACGCTTTG...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | GGATGCCATATTAGGAAAATAAAAAGGCCACGTAATATGTGTCCCATTCTTAAACAAAGCGTTGCTCACTaGTGGGATGGAAGTGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: GCHIRKIKRPRNMCPILKQSVAH*WDGSDR Trigger: GCGGTCACTTCCATCCCATCAGTGAGCAACGCTTTG...TTTAAGAATGGGACACATATTACGTGGCCTTTTTATTTTCCTAATATGGCATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACCAAAGCGTTGCTCACTaGTGGGATGGAAGTGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHQSVAH*WDGSDR Trigger: GCGGTCACTTCCATCCCATCAGTGAGCAACGCTTTG...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGACCCCCACGGTGACCTaGCTTGCGTCTTTGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLTPTVT*LASLIP Trigger: TGGTATCAAAGACGCAAGGCAGGTCACCGTGGGGGT...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACACCCCCACGGTGACCTaGCTTGCGTCTTTGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHTPTVT*LASLIP Trigger: TGGTATCAAAGACGCAAGGCAGGTCACCGTGGGGGT...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGGAGCTTGGATATTGTTaGTGCATATATAAACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRELGYC*CIYKPG Trigger: GCCAGGTTTATATATGCAGCAACAATATCCAAGCTC...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CTAAACCTGGCTTTGGAACAGGTAAAGCTAATTGGTAAGATTTATAGGATATTGATGTGGCCAAGCTTATaGCTACTACCACTGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LNLALEQVKLIGKIYRILMWPSL*LLPLAP Trigger: GGGGGCCAGTGGTAGTAGCCATAAGCTTGGCCACAT...CAATATCCTATAAATCTTACCAATTAGCTTTACCTGTTCCAAAGCCAGGTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACATGTGGCCAAGCTTATaGCTACTACCACTGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHMWPSL*LLPLAP Trigger: GGGGGCCAGTGGTAGTAGCCATAAGCTTGGCCACAT...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GTCATGTGGCTGTCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGTACCCAGAATTACAATaGAGGGCAAAACGAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VMWLSMSVFYLKGCQSYWYPELQ*RAKRGQ Trigger: TTGCCCTCGTTTTGCCCTCCATTGTAATTCTGGGTA...CCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGACAGCCACATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CACTCCCATCATTTCGTCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATTACCCAGAATTACAATaGAGGGCAAAACGAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSHHFVSCPTQDKHQETHYPELQ*RAKRGQ Trigger: TTGCCCTCGTTTTGCCCTCCATTGTAATTCTGGGTA...ATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGACGAAATGATGGGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CAA 72 bp | ACATCCTTCCTGTCCCATTTTTATGAGAGCATAAGATaGCTCCTGCATACCCTAGATGCTAATGTGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSFLSHFYESIR*LLHTLDANVMC Trigger: GCACATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATGGGACAGGAAGGATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CAA 72 bp | CGGGTTCTGTTTTCTACACTCCCATCATTTCGTCTCTaGTCCTACTCAAGACAAACATCAGGAAACACATGT | + |
|
Preference number: 4 (lower is better) Translates to: RVLFSTLPSFRL*SYSRQTSGNTC Trigger: ACATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGACGAAATGATGGGAGTGTAGAAAACAGAACCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAATTCAATCTCCTTGGCTaGCGACAAAGATCCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PIDINRKMEGFCNVIETKFNLLG*RQRSQV Trigger: GACTTGGGATCTTTGTCGTCAGCCAAGGAGATTGAA...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | GTTAATTACAAAGACAGAATAGATGCTGGAACTTGTCCTGCTGAATTCAGAGCATTCAATCTCCTTGGCTaGCGACAAAGATCCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VNYKDRIDAGTCPAEFRAFNLLG*RQRSQV Trigger: GACTTGGGATCTTTGTCGTCAGCCAAGGAGATTGAA...TGCTCTGAATTCAGCAGGACAAGTTCCAGCATCTATTCTGTCTTTGTAATTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGTTCAATCTCCTTGGCTaGCGACAAAGATCCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMFNLLG*RQRSQV Trigger: GACTTGGGATCTTTGTCGTCAGCCAAGGAGATTGAA...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAAGCTGATAAGCCATGTTaGGGAACAGGTATCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PIDINRKMEGFCNVIETKADKPC*GTGIFP Trigger: CGGAAAGATACCTGTTCCTCAACATGGCTTATCAGC...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGACAAGCCCAGGCTCATaGTGCCAAAGGAAATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMTSPGS*CQRKCT Trigger: TGTACATTTCCTTTGGCATCATGAGCCTGGGCTTGT...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCACAAGCCCAGGCTCATaGTGCCAAAGGAAATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSTSPGS*CQRKCT Trigger: TGTACATTTCCTTTGGCATCATGAGCCTGGGCTTGT...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGATTTATAGGATATTGCCATGAAGGTCTGCTGAATTGCATTTTGGAACATAGCTGTTTCCTGCACTaGAGCCAAGTATCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VRFIGYCHEGLLNCILEHSCFLH*SQVSSH Trigger: GTGGCTGGATACTTGGCTGCAGTGCAGGAAACAGCT...ATGTTCCAAAATGCAATTCAGCAGACCTTCATGGCAATATCCTATAAATCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GGATGCCATATTAGGAAAATAAAAAGGCCACGTAATATGTGTCCCATTCTTAAATATAAACCTGGCGGCTaGCATCCTTGGGACCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCHIRKIKRPRNMCPILKYKPGG*HPWDLA Trigger: AGCTAGGTCCCAAGGATGCCAGCCGCCAGGTTTATA...TTTAAGAATGGGACACATATTACGTGGCCTTTTTATTTTCCTAATATGGCATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GTCATGTGGCTGTCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGCACTCTGCTGGTTTCTaGCATATGGATGTATCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VMWLSMSVFYLKGCQSYWHSAGF*HMDVSH Trigger: ATGTGATACATCCATATGCCAGAAACCAGCAGAGTG...CCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGACAGCCACATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAACCTTCGTCTAGAAACTaGCTCTTTTCCCAGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PIDINRKMEGFCNVIETKPSSRN*LFSQPF Trigger: AAAGGGCTGGGAAAAGAGCCAGTTTCTAGACGAAGG...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CAA 72 bp | AACTCAGTTTTCACTGAGAATCCTCTTCTGGTAACCTaGTCAGGATACACACTGAAGCATCTTCATGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSVFTENPLLVT*SGYTLKHLHAD Trigger: ATCTGCATGAAGATGCTTCAGTGTGTATCCTGACAAGGTTACCAGAAGAGGATTCTCAGTGAAAACTGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGTGTTGCTCACATCAATaGGGATTTTGCCCACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMCCSHQ*GFCPQA Trigger: TGCTTGTGGGCAAAATCCTCATTGATGTGAGCAACA...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAATGTTGCTCACATCAATaGGGATTTTGCCCACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PIDINRKMEGFCNVIETKCCSHQ*GFCPQA Trigger: TGCTTGTGGGCAAAATCCTCATTGATGTGAGCAACA...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCCACGGTGACCTGCCTTaGGTCTTTGATACCATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSHGDLP*VFDTIY Trigger: ATAAATGGTATCAAAGACGCAAGGCAGGTCACCGTG...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | GTCATGTGGCTGTCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGGAGCTTGGATATTGTTaGTGCATATATAAACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VMWLSMSVFYLKGCQSYWELGYC*CIYKPG Trigger: GCCAGGTTTATATATGCAGCAACAATATCCAAGCTC...CCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGACAGCCACATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGGGCTACGTGAACAACTaGAAAGAAGAAGCTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMGYVNN*KEEAQQ Trigger: TTGCTGAGCTTCTTCTTTGCAGTTGTTCACGTAGCC...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCGGCTACGTGAACAACTaGAAAGAAGAAGCTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSGYVNN*KEEAQQ Trigger: TTGCTGAGCTTCTTCTTTGCAGTTGTTCACGTAGCC...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | TCGTCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATGTTCACTCCCTTATTGGATTCTGGGTACTaGTTTACTCTCATGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLVLLKTNIRKHMFTPLLDSGY*FTLMLL Trigger: CAACAACATGAGAGTAAACCAGTACCCAGAATCCAA...TAAGGGAGTGAACATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGACGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGTATGGCTACTACCACTaGCCCCCTCCAGAGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLYGYYH*PPPESK Trigger: TTTACTCTCTGGAGGGGGCCAGTGGTAGTAGCCATA...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACTATGGCTACTACCACTaGCCCCCTCCAGAGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHYGYYH*PPPESK Trigger: TTTACTCTCTGGAGGGGGCCAGTGGTAGTAGCCATA...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGATTTATAGGATATTGCCATGAAGGTCTGCTGAATTGCATTTTGGAACATTATGGCTACTACCACTaGCCCCCTCCAGAGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRFIGYCHEGLLNCILEHYGYYH*PPPESK Trigger: TTTACTCTCTGGAGGGGGCCAGTGGTAGTAGCCATA...ATGTTCCAAAATGCAATTCAGCAGACCTTCATGGCAATATCCTATAAATCTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCGGCAAGAACGAAGTTTaGTGGTGTGTAAAAGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSGKNEV*WCVKAV Trigger: TACCGCTTTTACACACCACCAAACTTCGTTCTTGCC...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGTTCAATCTCCTTGGCTaGCGACAAAGATCCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLFNLLG*RQRSQV Trigger: GACTTGGGATCTTTGTCGTCAGCCAAGGAGATTGAA...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGGCTGATAAGCCATGTTaGGGAACAGGTATCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLADKPC*GTGIFP Trigger: CGGAAAGATACCTGTTCCTCAACATGGCTTATCAGC...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | GGATGCCATATTAGGAAAATAAAAAGGCCACGTAATATGTGTCCCATTCTTAAAGCTGATAAGCCATGTTaGGGAACAGGTATCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GCHIRKIKRPRNMCPILKADKPC*GTGIFP Trigger: CGGAAAGATACCTGTTCCTCAACATGGCTTATCAGC...TTTAAGAATGGGACACATATTACGTGGCCTTTTTATTTTCCTAATATGGCATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | GGATGCCATATTAGGAAAATAAAAAGGCCACGTAATATGTGTCCCATTCTTAAAACAAGCCCAGGCTCATaGTGCCAAAGGAAATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GCHIRKIKRPRNMCPILKTSPGS*CQRKCT Trigger: TGTACATTTCCTTTGGCATCATGAGCCTGGGCTTGT...TTTAAGAATGGGACACATATTACGTGGCCTTTTTATTTTCCTAATATGGCATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGGTTAAAGCATCTTCATaGTGGGTGACGTCTACCACG | + |
|
Preference number: 4 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLVKASS*WVTSTT Trigger: CGTGGTAGACGTCACCCACCATGAAGATGCTTTAAC...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGAGTTTTCAATCTCCTTaGCTGACGACAAAGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMSFQSP*LTTKIP Trigger: TGGGATCTTTGTCGTCAGCCAAGGAGATTGAAAACT...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGCTGGTTTCTGGCATATaGATGTATCACATCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMLVSGI*MYHISD Trigger: GTCAGAGATGTGATACATCCATATGCCAGAAACCAG...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGCACTCTGCTGGTTTCTaGCATATGGATGTATCACAT | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMHSAGF*HMDVSH Trigger: ATGTGATACATCCATATGCCAGAAACCAGCAGAGTG...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR TCA 90 bp | CTAAACCTGGCTTTGGAACAGGTAAAGCTAATTGGTAAGATTTATAGGATATTGTGTTGCTCACATCAATaGGGATTTTGCCCACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNLALEQVKLIGKIYRILCCSHQ*GFCPQA Trigger: TGCTTGTGGGCAAAATCCTCATTGATGTGAGCAACA...CAATATCCTATAAATCTTACCAATTAGCTTTACCTGTTCCAAAGCCAGGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGGGCTACGTGAACAACTaGAAAGAAGAAGCTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLGYVNN*KEEAQQ Trigger: TTGCTGAGCTTCTTCTTTGCAGTTGTTCACGTAGCC...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACGGCTACGTGAACAACTaGAAAGAAGAAGCTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHGYVNN*KEEAQQ Trigger: TTGCTGAGCTTCTTCTTTGCAGTTGTTCACGTAGCC...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACGAATGGTCAGAGACTTaGCAAAATCCCCACTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHEWSET*QNPHFL Trigger: TAGGAAGTGGGGATTTTGCCAAGTCTCTGACCATTC...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGTTGGATTCTGGGTACTaGTTTACTCTCATGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMLDSGY*FTLMLL Trigger: CAACAACATGAGAGTAAACCAGTACCCAGAATCCAA...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GTCATGTGGCTGTCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGAAAGAAAGAAAAATGTaGCCAAGCTTATGGCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: VMWLSMSVFYLKGCQSYWKERKM*PSLWLL Trigger: TAGTAGCCATAAGCTTGGCCACATTTTTCTTTCTTT...CCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGACAGCCACATGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGGGCAAGAACGAAGTTTaGTGGTGTGTAAAAGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLGKNEV*WCVKAV Trigger: TACCGCTTTTACACACCACCAAACTTCGTTCTTGCC...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGTACCCAGAATTACAATaGAGGGCAAAACGAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLYPELQ*RAKRGQ Trigger: TTGCCCTCGTTTTGCCCTCCATTGTAATTCTGGGTA...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CAA 72 bp | AATTGCGATGTTAATTTAATGCCTACTACTTTGCACTaGTTCAGTATGAATCTGTCACCAAGCCTCTCAACG | + |
|
Preference number: 4 (lower is better) Translates to: NCDVNLMPTTLH*FSMNLSPSLST Trigger: CGTTGAGAGGCTTGGTGACAGATTCATACTGAACAAGTGCAAAGTAGTAGGCATTAAATTAACATCGCAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTCTAACCTATTCAGGAATGTTAAATTTGTATTGCGAGAAAGAACTGGCACTCTGCATTGGATTCTaGGTACTGGTTTACTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YSLTYSGMLNLYCEKELALCIGF*VLVYSH Trigger: ATGAGAGTAAACCAGTACCCAGAATCCAATGCAGAG...TGCCAGTTCTTTCTCGCAATACAAATTTAACATTCCTGAATAGGTTAGACTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGACCTGCTGTCGAGCTTaGATATTGTTGCTGCATATA | + |
|
Preference number: 4 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLTCCRA*ILLLHI Trigger: TATATGCAGCAACAATATCCAAGCTCGACAGCAGGT...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GGATGCCATATTAGGAAAATAAAAAGGCCACGTAATATGTGTCCCATTCTTAAAACCTGCTGTCGAGCTTaGATATTGTTGCTGCATATA | + |
|
Preference number: 4 (lower is better) Translates to: GCHIRKIKRPRNMCPILKTCCRA*ILLLHI Trigger: TATATGCAGCAACAATATCCAAGCTCGACAGCAGGT...TTTAAGAATGGGACACATATTACGTGGCCTTTTTATTTTCCTAATATGGCATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACACCTGCTGTCGAGCTTaGATATTGTTGCTGCATATA | + |
|
Preference number: 4 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHTCCRA*ILLLHI Trigger: TATATGCAGCAACAATATCCAAGCTCGACAGCAGGT...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACAGTTTTCAATCTCCTTaGCTGACGACAAAGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHSFQSP*LTTKIP Trigger: TGGGATCTTTGTCGTCAGCCAAGGAGATTGAAAACT...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS-3UTR CCA 90 bp | CTAAACCTGGCTTTGGAACAGGTAAAGCTAATTGGTAAGATTTATAGGATATTGAGTTTTCAATCTCCTTaGCTGACGACAAAGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNLALEQVKLIGKIYRILSFQSP*LTTKIP Trigger: TGGGATCTTTGTCGTCAGCCAAGGAGATTGAAAACT...CAATATCCTATAAATCTTACCAATTAGCTTTACCTGTTCCAAAGCCAGGTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATGTTCACTCCCTTAAAGAAAGAAAGAAAAATGTaGCCAAGCTTATGGCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: SLVLLKTNIRKHMFTPLKKERKM*PSLWLL Trigger: TAGTAGCCATAAGCTTGGCCACATTTTTCTTTCTTT...CTTTAAGGGAGTGAACATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GGATGCCATATTAGGAAAATAAAAAGGCCACGTAATATGTGTCCCATTCTTAAACTGGTTTCTGGCATATaGATGTATCACATCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GCHIRKIKRPRNMCPILKLVSGI*MYHISD Trigger: GTCAGAGATGTGATACATCCATATGCCAGAAACCAG...TTTAAGAATGGGACACATATTACGTGGCCTTTTTATTTTCCTAATATGGCATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | TTGAAGTTATGCTTATTTATAAGAATCCAGCAGTTACACATGGACACATCAGCACTGGTTTCTGGCATATaGATGTATCACATCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LKLCLFIRIQQLHMDTSALVSGI*MYHISD Trigger: GTCAGAGATGTGATACATCCATATGCCAGAAACCAG...TGCTGATGTGTCCATGTGTAACTGCTGGATTCTTATAAATAAGCATAACTTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| 3UTR CAA 72 bp | TGTGTAAATTGCGATGTTAATTTAATGCCTACTACTTaGCACTTGTTCAGTATGAATCTGTCACCAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CVNCDVNLMPTT*HLFSMNLSPSL Trigger: GAGGCTTGGTGACAGATTCATACTGAACAAGTGCAAAGTAGTAGGCATTAAATTAACATCGCAATTTACACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTTATGCTTATTTATAAGAATCCAGCAGTTACACATGGACACATCAGCAGAGCTTGGATATTGTTaGTGCATATATAAACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKLCLFIRIQQLHMDTSAELGYC*CIYKPG Trigger: GCCAGGTTTATATATGCAGCAACAATATCCAAGCTC...TGCTGATGTGTCCATGTGTAACTGCTGGATTCTTATAAATAAGCATAACTTCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GGATGCCATATTAGGAAAATAAAAAGGCCACGTAATATGTGTCCCATTCTTAAATTGGATTCTGGGTACTaGTTTACTCTCATGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GCHIRKIKRPRNMCPILKLDSGY*FTLMLL Trigger: CAACAACATGAGAGTAAACCAGTACCCAGAATCCAA...TTTAAGAATGGGACACATATTACGTGGCCTTTTTATTTTCCTAATATGGCATCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS-3UTR CCA 90 bp | GTAAGATTTATAGGATATTGCCATGAAGGTCTGCTGAATTGCATTTTGGAACATTTGGATTCTGGGTACTaGTTTACTCTCATGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VRFIGYCHEGLLNCILEHLDSGY*FTLMLL Trigger: CAACAACATGAGAGTAAACCAGTACCCAGAATCCAA...ATGTTCCAAAATGCAATTCAGCAGACCTTCATGGCAATATCCTATAAATCTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS-3UTR CCA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGAAAGAAAGAAAAATGTaGCCAAGCTTATGGCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: HFYESIRLLLHTLDANVMKERKM*PSLWLL Trigger: TAGTAGCCATAAGCTTGGCCACATTTTTCTTTCTTT...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CCA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCTGTTCACAATCTCAATaGGAATCTTGTAAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSCSQSQ*ESCKSH Trigger: GTGACTTTTACAAGATTCCCATTGAGATTGTGAACA...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAATGTTCACAATCTCAATaGGAATCTTGTAAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PIDINRKMEGFCNVIETKCSQSQ*ESCKSH Trigger: GTGACTTTTACAAGATTCCCATTGAGATTGTGAACA...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGATTTATAGGATATTGCCATGAAGGTCTGCTGAATTGCATTTTGGAACATTGTTCACAATCTCAATaGGAATCTTGTAAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VRFIGYCHEGLLNCILEHCSQSQ*ESCKSH Trigger: GTGACTTTTACAAGATTCCCATTGAGATTGTGAACA...ATGTTCCAAAATGCAATTCAGCAGACCTTCATGGCAATATCCTATAAATCTTAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGAGGACAGGGCAGCTCTGGGCCACTGGACAGGAGGCAAGCCAAAAAGGGAAACCTGCTGTCGAGCTaGGATATTGTTGCTGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: LGGQGSSGPLDRRQAKKGNLLSS*DIVAAY Trigger: ATATGCAGCAACAATATCCAAGCTCGACAGCAGGTT...TCCCTTTTTGGCTTGCCTCCTGTCCAGTGGCCCAGAGCTGCCCTGTCCTCCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTCGAATGGTCAGAGACTaGGCAAAATCCCCACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QGPRRGPKVMAWMEVCVARMVRD*AKSPLP Trigger: AGGAAGTGGGGATTTTGCCAAGTCTCTGACCATTCG...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTGGGCAAGAACGAAGTTaGGTGGTGTGTAAAAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAGQERS*VVCKSG Trigger: ACCGCTTTTACACACCACCAAACTTCGTTCTTGCCC...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTACATCAATGAGGATTTaGCCCACAAGCAGATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QGPRRGPKVMAWMEVCVATSMRI*PTSRCL Trigger: GAGACATCTGCTTGTGGGCAAAATCCTCATTGATGT...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTAACCTGCTGTCGAGCTaGGATATTGTTGCTGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: QGPRRGPKVMAWMEVCVANLLSS*DIVAAY Trigger: ATATGCAGCAACAATATCCAAGCTCGACAGCAGGTT...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTAAGTTTTCAATCTCCTaGGCTGACGACAAAGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAKFSIS*ADDKDP Trigger: GGGATCTTTGTCGTCAGCCAAGGAGATTGAAAACTT...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTACCTGCCTTGCGTCTTaGATACCATTTATGCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: QGPRRGPKVMAWMEVCVATCLAS*IPFMPL Trigger: TAATGGCATAAATGGTATCAAAGACGCAAGGCAGGT...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTATCACATTAAATCCTTaGACAATCAAGGAGTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAITLNP*TIKESG Trigger: CCCGGACTCCTTGATTGTCAAAGGATTTAATGTGAT...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTTTCCGACCTCCTCATaGGTAAGCAGAGGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPFPTSS*VSRGCR Trigger: CCTACAGCCTCTGCTTACCAATGAGGAGGTCGGAAA...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCTTTCCGACCTCCTCATaGGTAAGCAGAGGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSFPTSS*VSRGCR Trigger: CCTACAGCCTCTGCTTACCAATGAGGAGGTCGGAAA...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS TCA 90 bp | TCCACGCGTTCTCAATATTGGCATGAACCTGCTGATAAGCCATGTTaGGGAACAGGTATCTTTCCGACCTCCTCATTGGTAAGCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: STRSQYWHEPADKPC*GTGIFPTSSLVSRG Trigger: GCCTCTGCTTACCAATGAGGAGGTCGGAAAGATACCTGTTCCTCAACATGGCTTATCAGCAGGTTCATGCCAATATTGAGAACGCGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
||
| CDS CCA 90 bp | TTGGCTGACGACAAAGATCCCAAGTCAACAGGAATAAAATTCAGCTaGCGGGCGAGCTCGATAACCTGCTGTCGAGCTTGGATATTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LADDKDPKSTGIKFS*RASSITCCRAWILL Trigger: CAACAATATCCAAGCTCGACAGCAGGTTATCGAGCTCGCCCGCCAGCTGAATTTTATTCCTGTTGACTTGGGATCTTTGTCGTCAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGTTTCCGACCTCCTCATaGGTAAGCAGAGGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRFPTSS*VSRGCR Trigger: CCTACAGCCTCTGCTTACCAATGAGGAGGTCGGAAA...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS CCA 90 bp | CAGAATTACAATGGAGGGCAAAACGAGGGCAAGAACGAAGTTTGGTaGTGTGTAAAAGCGGTAGTACTCTTCTGCAAACGCACGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QNYNGGQNEGKNEVW*CVKAVVLFCKRTLP Trigger: TGGAAGCGTGCGTTTGCAGAAGAGTACTACCGCTTTTACACACCACCAAACTTCGTTCTTGCCCTCGTTTTGCCCTCCATTGTAATTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000148333.8 ENSMUST00000164219.8 |
||
| CDS CCA 90 bp | ACCCAGAATTACAATGGAGGGCAAAACGAGGGCAAGAACGAAGTTTaGTGGTGTGTAAAAGCGGTAGTACTCTTCTGCAAACGCACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TQNYNGGQNEGKNEV*WCVKAVVLFCKRTL Trigger: AAGCGTGCGTTTGCAGAAGAGTACTACCGCTTTTACACACCACCAAACTTCGTTCTTGCCCTCGTTTTGCCCTCCATTGTAATTCTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000148333.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGACCAAGGCGAGGGCCTAAAGTAATGGCATGGATGGAAGTGTGTGTGGCTTTTACTCTCATGTTGTaGCTCACATCAATGAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: QGPRRGPKVMAWMEVCVAFTLML*LTSMRI Trigger: AATCCTCATTGATGTGAGCAACAACATGAGAGTAAA...AGCCACACACACTTCCATCCATGCCATTACTTTAGGCCCTCGCCTTGGTCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCACATCAATGAGGATTTaGCCCACAAGCAGATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSTSMRI*PTSRCL Trigger: GAGACATCTGCTTGTGGGCAAAATCCTCATTGATGT...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCAACCTGCTGTCGAGCTaGGATATTGTTGCTGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSNLLSS*DIVAAY Trigger: ATATGCAGCAACAATATCCAAGCTCGACAGCAGGTT...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTACGATCGGCAAGGTTTaGTTCACAATCTCAATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPTIGKV*FTISMG Trigger: TCCCATTGAGATTGTGAACAAAACCTTGCCGATCGT...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTACCTGCCTTGCGTCTTaGATACCATTTATGCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPTCLAS*IPFMPL Trigger: TAATGGCATAAATGGTATCAAAGACGCAAGGCAGGT...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTTCCTGGTTTACTCTCATGTaGTTGCTCACATCAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QYRIQSTCLGGQVLLDPSWFTLM*LLTSMR Trigger: CCTCATTGATGTGAGCAACAACATGAGAGTAAACCA...GGAAGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CCACAATACCGTATTCAGAGTACCTGCTTGGGAGGTCAAGTGTTGCTAGATCCTATCACATTAAATCCTTaGACAATCAAGGAGTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PQYRIQSTCLGGQVLLDPITLNP*TIKESG Trigger: CCCGGACTCCTTGATTGTCAAAGGATTTAATGTGAT...AGGATCTAGCAACACTTGACCTCCCAAGCAGGTACTCTGAATACGGTATTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGAACCTGCTGTCGAGCTaGGATATTGTTGCTGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: AIFQASSTRIGKQTMVGKNLLSS*DIVAAY Trigger: ATATGCAGCAACAATATCCAAGCTCGACAGCAGGTT...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGACGATCGGCAAGGTTTaGTTCACAATCTCAATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AIFQASSTRIGKQTMVGKTIGKV*FTISMG Trigger: TCCCATTGAGATTGTGAACAAAACCTTGCCGATCGT...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS CCA 90 bp | GGCTTATGCATGGGAGGAGTAATATCATCTTACCCAGAATTACAATaGAGGGCAAAACGAGGGCAAGAACGAAGTTTGGTGGTGTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLCMGGVISSYPELQ*RAKRGQERSLVVCK Trigger: TTTACACACCACCAAACTTCGTTCTTGCCCTCGTTTTGCCCTCCATTGTAATTCTGGGTAAGATGATATTACTCCTCCCATGCATAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGACCTGCCTTGCGTCTTaGATACCATTTATGCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: AIFQASSTRIGKQTMVGKTCLAS*IPFMPL Trigger: TAATGGCATAAATGGTATCAAAGACGCAAGGCAGGT...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | ACTATGTACTGTGCTTACATGGTAGAGGGCAAAATGAAGGCCCCTAGATACAGGACCTGCCTTGCGTCTTaGATACCATTTATGCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: TMYCAYMVEGKMKAPRYRTCLAS*IPFMPL Trigger: TAATGGCATAAATGGTATCAAAGACGCAAGGCAGGT...CCTGTATCTAGGGGCCTTCATTTTGCCCTCTACCATGTAAGCACAGTACATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | TACATGACAAATGGAACAGAAAAGACAAGTAGAACAGCTACCCCTGAAGTCAGACGAATGGTCAGAGACTaGGCAAAATCCCCACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YMTNGTEKTSRTATPEVRRMVRD*AKSPLP Trigger: AGGAAGTGGGGATTTTGCCAAGTCTCTGACCATTCG...TCTGACTTCAGGGGTAGCTGTTCTACTTGTCTTTTCTGTTCCATTTGTCATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | GCTATTTTCCAGGCCAGCAGTACAAGGATAGGAAAACAGACAATGGTGGGAAAGTGGTTTACTCTCATGTaGTTGCTCACATCAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AIFQASSTRIGKQTMVGKWFTLM*LLTSMR Trigger: CCTCATTGATGTGAGCAACAACATGAGAGTAAACCA...CTTTCCCACCATTGTCTGTTTTCCTATCCTTGTACTGCTGGCCTGGAAAATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015797.11 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAATTTCCGACCTCCTCATaGGTAAGCAGAGGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PIDINRKMEGFCNVIETKFPTSS*VSRGCR Trigger: CCTACAGCCTCTGCTTACCAATGAGGAGGTCGGAAA...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGTTTCCGACCTCCTCATaGGTAAGCAGAGGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: HFYESIRLLLHTLDANVMFPTSS*VSRGCR Trigger: CCTACAGCCTCTGCTTACCAATGAGGAGGTCGGAAA...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | AATTACAAAGACAGAATAGATGCTGGAACTTGTCCTGCTGAATTCAGAGCAGTGGGGCAAGAACGAAGTTaGGTGGTGTGTAAAAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: NYKDRIDAGTCPAEFRAVGQERS*VVCKSG Trigger: ACCGCTTTTACACACCACCAAACTTCGTTCTTGCCC...CACTGCTCTGAATTCAGCAGGACAAGTTCCAGCATCTATTCTGTCTTTGTAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGCGAATGGTCAGAGACTaGGCAAAATCCCCACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HFYESIRLLLHTLDANVMRMVRD*AKSPLP Trigger: AGGAAGTGGGGATTTTGCCAAGTCTCTGACCATTCG...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCCGAATGGTCAGAGACTaGGCAAAATCCCCACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSRMVRD*AKSPLP Trigger: AGGAAGTGGGGATTTTGCCAAGTCTCTGACCATTCG...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | GTCATGTGGCTGTCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGACGATCGGCAAGGTTTaGTTCACAATCTCAATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VMWLSMSVFYLKGCQSYWTIGKV*FTISMG Trigger: TCCCATTGAGATTGTGAACAAAACCTTGCCGATCGT...CCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGACAGCCACATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAAGGGCAAGAACGAAGTTaGGTGGTGTGTAAAAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: PIDINRKMEGFCNVIETKGQERS*VVCKSG Trigger: ACCGCTTTTACACACCACCAAACTTCGTTCTTGCCC...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGGGGCAAGAACGAAGTTaGGTGGTGTGTAAAAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: HFYESIRLLLHTLDANVMGQERS*VVCKSG Trigger: ACCGCTTTTACACACCACCAAACTTCGTTCTTGCCC...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATGTTCACTCCCTTAAAGACATCAATGAGGATTTaGCCCACAAGCAGATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLVLLKTNIRKHMFTPLKTSMRI*PTSRCL Trigger: GAGACATCTGCTTGTGGGCAAAATCCTCATTGATGT...CTTTAAGGGAGTGAACATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | TCGTCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATGTTCACTCCCTTATGGTTTACTCTCATGTaGTTGCTCACATCAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSLVLLKTNIRKHMFTPLWFTLM*LLTSMR Trigger: CCTCATTGATGTGAGCAACAACATGAGAGTAAACCA...TAAGGGAGTGAACATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGACGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAGTTATGCTTATTTATAAGAATCCAGCAGTTACACATGGACACATCAGCATTTCCGACCTCCTCATaGGTAAGCAGAGGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKLCLFIRIQQLHMDTSAFPTSS*VSRGCR Trigger: CCTACAGCCTCTGCTTACCAATGAGGAGGTCGGAAA...TGCTGATGTGTCCATGTGTAACTGCTGGATTCTTATAAATAAGCATAACTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACCGAATGGTCAGAGACTaGGCAAAATCCCCACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHRMVRD*AKSPLP Trigger: AGGAAGTGGGGATTTTGCCAAGTCTCTGACCATTCG...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGACATCAATGAGGATTTaGCCCACAAGCAGATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HFYESIRLLLHTLDANVMTSMRI*PTSRCL Trigger: GAGACATCTGCTTGTGGGCAAAATCCTCATTGATGT...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAAACATCAATGAGGATTTaGCCCACAAGCAGATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PIDINRKMEGFCNVIETKTSMRI*PTSRCL Trigger: GAGACATCTGCTTGTGGGCAAAATCCTCATTGATGT...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAAAACCTGCTGTCGAGCTaGGATATTGTTGCTGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: PIDINRKMEGFCNVIETKNLLSS*DIVAAY Trigger: ATATGCAGCAACAATATCCAAGCTCGACAGCAGGTT...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGAAGTTTTCAATCTCCTaGGCTGACGACAAAGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: HFYESIRLLLHTLDANVMKFSIS*ADDKDP Trigger: GGGATCTTTGTCGTCAGCCAAGGAGATTGAAAACTT...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGACGATCGGCAAGGTTTaGTTCACAATCTCAATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HFYESIRLLLHTLDANVMTIGKV*FTISMG Trigger: TCCCATTGAGATTGTGAACAAAACCTTGCCGATCGT...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCACCTGCCTTGCGTCTTaGATACCATTTATGCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSTCLAS*IPFMPL Trigger: TAATGGCATAAATGGTATCAAAGACGCAAGGCAGGT...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | GTCATGTGGCTGTCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGTTTACTCTCATGTTGTaGCTCACATCAATGAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: VMWLSMSVFYLKGCQSYWFTLML*LTSMRI Trigger: AATCCTCATTGATGTGAGCAACAACATGAGAGTAAA...CCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGACAGCCACATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CCGATTGACATAAACAGGAAGATGGAAGGGTTCTGTAATGTGATAGAGACTAAATGGTTTACTCTCATGTaGTTGCTCACATCAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PIDINRKMEGFCNVIETKWFTLM*LLTSMR Trigger: CCTCATTGATGTGAGCAACAACATGAGAGTAAACCA...TTTAGTCTCTATCACATTACAGAACCCTTCCATCTTCCTGTTTATGTCAATCGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CATTTTTATGAGAGCATAAGATTGCTCCTGCATACCCTAGATGCTAATGTGATGATCACATTAAATCCTTaGACAATCAAGGAGTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: HFYESIRLLLHTLDANVMITLNP*TIKESG Trigger: CCCGGACTCCTTGATTGTCAAAGGATTTAATGTGAT...CATCACATTAGCATCTAGGGTATGCAGGAGCAATCTTATGCTCTCATAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | AGACAAGTAGAACAGCTACCCCTGAAGTCAGATACTCAAATCAAAAATGTATCCATCACATTAAATCCTTaGACAATCAAGGAGTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RQVEQLPLKSDTQIKNVSITLNP*TIKESG Trigger: CCCGGACTCCTTGATTGTCAAAGGATTTAATGTGAT...GGATACATTTTTGATTTGAGTATCTGACTTCAGGGGTAGCTGTTCTACTTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
||
| CDS-3UTR CAA 90 bp | CTAAACCTGGCTTTGGAACAGGTAAAGCTAATTGGTAAGATTTATAGGATATTGACATCAATGAGGATTTaGCCCACAAGCAGATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LNLALEQVKLIGKIYRILTSMRI*PTSRCL Trigger: GAGACATCTGCTTGTGGGCAAAATCCTCATTGATGT...CAATATCCTATAAATCTTACCAATTAGCTTTACCTGTTCCAAAGCCAGGTTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | TCTCTTGTCCTACTCAAGACAAACATCAGGAAACACATGTTCACTCCCTTAAAGTTTACTCTCATGTTGTaGCTCACATCAATGAGGATT | + |
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Preference number: 5 (lower is better) Translates to: SLVLLKTNIRKHMFTPLKFTLML*LTSMRI Trigger: AATCCTCATTGATGTGAGCAACAACATGAGAGTAAA...CTTTAAGGGAGTGAACATGTGTTTCCTGATGTTTGTCTTGAGTAGGACAAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | GTAAGATTTATAGGATATTGCCATGAAGGTCTGCTGAATTGCATTTTGGAACATAACCTGCTGTCGAGCTaGGATATTGTTGCTGCATAT | + |
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Preference number: 5 (lower is better) Translates to: VRFIGYCHEGLLNCILEHNLLSS*DIVAAY Trigger: ATATGCAGCAACAATATCCAAGCTCGACAGCAGGTT...ATGTTCCAAAATGCAATTCAGCAGACCTTCATGGCAATATCCTATAAATCTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGAAGTTTTCAATCTCCTaGGCTGACGACAAAGATCCC | + |
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Preference number: 5 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLKFSIS*ADDKDP Trigger: GGGATCTTTGTCGTCAGCCAAGGAGATTGAAAACTT...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | CTAAACCTGGCTTTGGAACAGGTAAAGCTAATTGGTAAGATTTATAGGATATTGAAGTTTTCAATCTCCTaGGCTGACGACAAAGATCCC | + |
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Preference number: 5 (lower is better) Translates to: LNLALEQVKLIGKIYRILKFSIS*ADDKDP Trigger: GGGATCTTTGTCGTCAGCCAAGGAGATTGAAAACTT...CAATATCCTATAAATCTTACCAATTAGCTTTACCTGTTCCAAAGCCAGGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACAAGTTTTCAATCTCCTaGGCTGACGACAAAGATCCC | + |
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Preference number: 5 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHKFSIS*ADDKDP Trigger: GGGATCTTTGTCGTCAGCCAAGGAGATTGAAAACTT...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | TACAGTCTAACCTATTCAGGAATGTTAAATTTGTATTGCGAGAAAGAACTGGCAACGATCGGCAAGGTTTaGTTCACAATCTCAATGGGA | + |
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Preference number: 5 (lower is better) Translates to: YSLTYSGMLNLYCEKELATIGKV*FTISMG Trigger: TCCCATTGAGATTGTGAACAAAACCTTGCCGATCGT...TGCCAGTTCTTTCTCGCAATACAAATTTAACATTCCTGAATAGGTTAGACTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | TCCATGTCCGTTTTCTACTTAAAAGGATGTCAGTCATATTGGATTAAGATTCACTGGTTTACTCTCATGTaGTTGCTCACATCAATGAGG | + |
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Preference number: 5 (lower is better) Translates to: SMSVFYLKGCQSYWIKIHWFTLM*LLTSMR Trigger: CCTCATTGATGTGAGCAACAACATGAGAGTAAACCA...GTGAATCTTAATCCAATATGACTGACATCCTTTTAAGTAGAAAACGGACATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGATCACATTAAATCCTTaGACAATCAAGGAGTCCGGG | + |
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Preference number: 5 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLITLNP*TIKESG Trigger: CCCGGACTCCTTGATTGTCAAAGGATTTAATGTGAT...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | GGATGCCATATTAGGAAAATAAAAAGGCCACGTAATATGTGTCCCATTCTTAAAATCACATTAAATCCTTaGACAATCAAGGAGTCCGGG | + |
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Preference number: 5 (lower is better) Translates to: GCHIRKIKRPRNMCPILKITLNP*TIKESG Trigger: CCCGGACTCCTTGATTGTCAAAGGATTTAATGTGAT...TTTAAGAATGGGACACATATTACGTGGCCTTTTTATTTTCCTAATATGGCATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | GTGATGTGCCCCTTCTCAATAATATATGATTATGCATTTCTGCTCCTTAAATTGTTTACTCTCATGTTGTaGCTCACATCAATGAGGATT | + |
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Preference number: 5 (lower is better) Translates to: VMCPFSIIYDYAFLLLKLFTLML*LTSMRI Trigger: AATCCTCATTGATGTGAGCAACAACATGAGAGTAAA...CAATTTAAGGAGCAGAAATGCATAATCATATATTATTGAGAAGGGGCACATCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000164219.8 |
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| CDS-3UTR CAA 90 bp | CTAAACCTGGCTTTGGAACAGGTAAAGCTAATTGGTAAGATTTATAGGATATTGTTTACTCTCATGTTGTaGCTCACATCAATGAGGATT | + |
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Preference number: 5 (lower is better) Translates to: LNLALEQVKLIGKIYRILFTLML*LTSMRI Trigger: AATCCTCATTGATGTGAGCAACAACATGAGAGTAAA...CAATATCCTATAAATCTTACCAATTAGCTTTACCTGTTCCAAAGCCAGGTTTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000164219.8 |
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| CDS GCA 72 bp | AAGAAGAAGCTCAGCAATCCCAGCTGTTTCCTGCACTaGAGCCAAGTATCCAGCCACGGGGGAAATCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: KKKLSNPSCFLH*SQVSSHGGNRR Trigger: CCGCCGATTTCCCCCGTGGCTGGATACTTGGCTGCAGTGCAGGAAACAGCTGGGATTGCTGAGCTTCTTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS GCA 72 bp | GCGGTACTTAGTGCCATAATAAAGCTGATACGCAGCTaGCAGGAGGCCAGCCAGGTACACCAGAGACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: AVLSAIIKLIRS*QEASQVHQRQQ Trigger: CTGCTGTCTCTGGTGTACCTGGCTGGCCTCCTGGCAGCTGCGTATCAGCTTTATTATGGCACTAAGTACCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS CAA 72 bp | CAGCTGGCGGGCGAGCTCGATAACCTGCTGTCGAGCTaGGATATTGTTGCTGCATATATAAACCTGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: QLAGELDNLLSS*DIVAAYINLAA Trigger: AGCCGCCAGGTTTATATATGCAGCAACAATATCCAAGCTCGACAGCAGGTTATCGAGCTCGCCCGCCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS TCA 72 bp | GAAACTGAACTCTCTCCAGTTCAAAGCGTTGCTCACTaGTGGGATGGAAGTGACCGCCAGCAGGGACAACAA | + |
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Preference number: 6 (lower is better) Translates to: ETELSPVQSVAH*WDGSDRQQGQQ Trigger: TTGTTGTCCCTGCTGGCGGTCACTTCCATCCCATCAGTGAGCAACGCTTTGAACTGGAGAGAGTTCAGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS CCA 72 bp | TGTTGCTGCATATATAAACCTGGCGGCTGGCATCCTTaGGACCTAGCTGAAGTGCCCAAGCTGAGATCACAT | + |
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Preference number: 6 (lower is better) Translates to: CCCIYKPGGWHP*DLAEVPKLRSH Trigger: ATGTGATCTCAGCTTGGGCACTTCAGCTAGGTCCCAAGGATGCCAGCCGCCAGGTTTATATATGCAGCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS CCA 72 bp | GACAAAGATCCCAAGTCAACAGGAATAAAATTCAGCTaGCGGGCGAGCTCGATAACCTGCTGTCGAGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: DKDPKSTGIKFS*RASSITCCRAW Trigger: CCAAGCTCGACAGCAGGTTATCGAGCTCGCCCGCCAGCTGAATTTTATTCCTGTTGACTTGGGATCTTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS CAA 72 bp | CTTCCTATCACCCCCACGGTGACCTGCCTTGCGTCTTaGATACCATTTATGCCATTAGGCAAAAACGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LPITPTVTCLAS*IPFMPLGKNVS Trigger: GGAGACGTTTTTGCCTAATGGCATAAATGGTATCAAAGACGCAAGGCAGGTCACCGTGGGGGTGATAGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS CAA 90 bp | AATAAAATTCAGCTGGCGGGCGAGCTCGATAACCTGCTGTCGAGCTaGGATATTGTTGCTGCATATATAAACCTGGCGGCTGGCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: NKIQLAGELDNLLSS*DIVAAYINLAAGIL Trigger: AAGGATGCCAGCCGCCAGGTTTATATATGCAGCAACAATATCCAAGCTCGACAGCAGGTTATCGAGCTCGCCCGCCAGCTGAATTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS GCA 72 bp | ATCCCCACTTCCTATCACCCCCACGGTGACCTGCCTTaGGTCTTTGATACCATTTATGCCATTAGGCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: IPTSYHPHGDLP*VFDTIYAIRQK Trigger: TTTTTGCCTAATGGCATAAATGGTATCAAAGACGCAAGGCAGGTCACCGTGGGGGTGATAGGAAGTGGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS CCA 72 bp | AATGGAGGGCAAAACGAGGGCAAGAACGAAGTTTGGTaGTGTGTAAAAGCGGTAGTACTCTTCTGCAAACGC | + |
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Preference number: 6 (lower is better) Translates to: NGGQNEGKNEVW*CVKAVVLFCKR Trigger: GCGTTTGCAGAAGAGTACTACCGCTTTTACACACCACCAAACTTCGTTCTTGCCCTCGTTTTGCCCTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS CAA 90 bp | TACCCAGAATTACAATGGAGGGCAAAACGAGGGCAAGAACGAAGTTaGGTGGTGTGTAAAAGCGGTAGTACTCTTCTGCAAACGCACGCT | + |
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Preference number: 6 (lower is better) Translates to: YPELQWRAKRGQERS*VVCKSGSTLLQTHA Trigger: AGCGTGCGTTTGCAGAAGAGTACTACCGCTTTTACACACCACCAAACTTCGTTCTTGCCCTCGTTTTGCCCTCCATTGTAATTCTGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS CCA 72 bp | TGGCGACGATCGGCAAGGTTTTGTTCACAATCTCAATaGGAATCTTGTAAAAGTCACTCTGCTGGTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: WRRSARFCSQSQ*ESCKSHSAGFW Trigger: CCAGAAACCAGCAGAGTGACTTTTACAAGATTCCCATTGAGATTGTGAACAAAACCTTGCCGATCGTCGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS CCA 72 bp | TACAATGGAGGGCAAAACGAGGGCAAGAACGAAGTTTaGTGGTGTGTAAAAGCGGTAGTACTCTTCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: YNGGQNEGKNEV*WCVKAVVLFCK Trigger: TTTGCAGAAGAGTACTACCGCTTTTACACACCACCAAACTTCGTTCTTGCCCTCGTTTTGCCCTCCATTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS CAA 72 bp | TTTACTCTCATGTTGTTGCTCACATCAATGAGGATTTaGCCCACAAGCAGATGTCTCAGGTCCCACAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: FTLMLLLTSMRI*PTSRCLRSHKE Trigger: CTCCTTGTGGGACCTGAGACATCTGCTTGTGGGCAAAATCCTCATTGATGTGAGCAACAACATGAGAGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS CAA 72 bp | TTACAATGGAGGGCAAAACGAGGGCAAGAACGAAGTTaGGTGGTGTGTAAAAGCGGTAGTACTCTTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: LQWRAKRGQERS*VVCKSGSTLLQ Trigger: TTGCAGAAGAGTACTACCGCTTTTACACACCACCAAACTTCGTTCTTGCCCTCGTTTTGCCCTCCATTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS TCA 72 bp | TCTCAATATTGGCATGAACCTGCTGATAAGCCATGTTaGGGAACAGGTATCTTTCCGACCTCCTCATTGGTA | + |
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Preference number: 6 (lower is better) Translates to: SQYWHEPADKPC*GTGIFPTSSLV Trigger: TACCAATGAGGAGGTCGGAAAGATACCTGTTCCTCAACATGGCTTATCAGCAGGTTCATGCCAATATTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000115427.8 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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| CDS CCA 72 bp | ATGGGAGGAGTAATATCATCTTACCCAGAATTACAATaGAGGGCAAAACGAGGGCAAGAACGAAGTTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: MGGVISSYPELQ*RAKRGQERSLV Trigger: CACCAAACTTCGTTCTTGCCCTCGTTTTGCCCTCCATTGTAATTCTGGGTAAGATGATATTACTCCTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000015797.11 ENSMUST00000115424.9 ENSMUST00000115425.9 ENSMUST00000115426.9 ENSMUST00000148333.8 ENSMUST00000164219.8 |
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