Pregenerated sensors for STEAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015652Ensembl transcript IDs: ENSMUST00000015796.9, ENSMUST00000169542.2
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GTTCTACAACCTGGAGGCCATCTCAGTCCTGTTAATTTTGCTGACATCTTCCCACCAAAGCGTGTACTGTaGCCAGAAGAAGAGAGACAA | + |
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Preference number: 2 (lower is better) Translates to: VLQPGGHLSPVNFADIFPPKRVL*PEEERQ Trigger: TTGTCTCTCTTCTTCTGGGCACAGTACACGCTTTGG...TGGGAAGATGTCAGCAAAATTAACAGGACTGAGATGGCCTCCAGGTTGTAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACAGTAGTTCTACAACCTGGAGGCCATCTCAGTCCTGTTAATTTTGCTGACTATCAGGACAAGAGTTaGAAGGAAAACAGCTATCAT | + |
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Preference number: 2 (lower is better) Translates to: QTVVLQPGGHLSPVNFADYQDKS*KENSYH Trigger: ATGATAGCTGTTTTCCTTCCAACTCTTGTCCTGATA...GTCAGCAAAATTAACAGGACTGAGATGGCCTCCAGGTTGTAGAACTACTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| 3UTR-3UTR CAA 90 bp | AACCTGGAGGCCATCTCAGTCCTGTTAATTTTGCTGACATCTTCCCAACCACATGAGACAATTCCTAGTTaGCTTGTACGGAAATCTCCA | + |
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Preference number: 3 (lower is better) Translates to: NLEAISVLLILLTSSQPHETIPS*LVRKSP Trigger: TGGAGATTTCCGTACAAGCAAACTAGGAATTGTCTC...ATGTGGTTGGGAAGATGTCAGCAAAATTAACAGGACTGAGATGGCCTCCAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| 3UTR TCA 72 bp | GCTATCATAAAAGTCGGAGGCATGTACCATACAAATTaGCTGACATCTACCCATTTATTCCAGGCAAAAACC | + |
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Preference number: 3 (lower is better) Translates to: AIIKVGGMYHTN*LTSTHLFQAKT Trigger: GGTTTTTGCCTGGAATAAATGGGTAGATGTCAGTCAATTTGTATGGTACATGCCTCCGACTTTTATGATAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| CDS-3UTR CCA 90 bp | CAAACAGTAGTTCTACAACCTGGAGGCCATCTCAGTCCTGTTAATTTTGCTGACCCAAGAGAGCCAAGATaGCCAGCCCCACAATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: QTVVLQPGGHLSPVNFADPREPR*PAPQSP Trigger: TGGGGATTGTGGGGCTGGCCATCTTGGCTCTCTTGG...GTCAGCAAAATTAACAGGACTGAGATGGCCTCCAGGTTGTAGAACTACTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| CDS-3UTR GCA 90 bp | GTTCTACAACCTGGAGGCCATCTCAGTCCTGTTAATTTTGCTGACATCTTCCCAATTCTCCAGACATCATaGTCTACCCAGGCATCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VLQPGGHLSPVNFADIFPILQTS*STQASS Trigger: AGAGGATGCCTGGGTAGAGCATGATGTCTGGAGAAT...TGGGAAGATGTCAGCAAAATTAACAGGACTGAGATGGCCTCCAGGTTGTAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| CDS-3UTR CCA 90 bp | GCAGGCACAGGGCGATTTTACATATCAGGACAAGAGTTGGAAGGAAAACAGCTACTGGCTGTTGTTACATaGGCCCTTTCTGGTACATTG | + |
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Preference number: 4 (lower is better) Translates to: AGTGRFYISGQELEGKQLLAVVT*ALSGTL Trigger: CAATGTACCAGAAAGGGCCCATGTAACAACAGCCAG...TAGCTGTTTTCCTTCCAACTCTTGTCCTGATATGTAAAATCGCCCTGTGCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| CDS-3UTR TCA 90 bp | GTTCTACAACCTGGAGGCCATCTCAGTCCTGTTAATTTTGCTGACATCTTCCCAGTTTGTAAGCCCAGTTaGGTAGCTTGTATCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: VLQPGGHLSPVNFADIFPVCKPS*VACICR Trigger: CCTACAGATACAAGCTACTCAACTGGGCTTACAAAC...TGGGAAGATGTCAGCAAAATTAACAGGACTGAGATGGCCTCCAGGTTGTAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| 3UTR CAA 72 bp | TTCTACAACCTGGAGGCCATCTCAGTCCTGTTAATTTaGCTGACATCTTCCCAACCACATCTAATCTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: FYNLEAISVLLI*LTSSQPHLIFS Trigger: ACTGAAGATTAGATGTGGTTGGGAAGATGTCAGCAAAATTAACAGGACTGAGATGGCCTCCAGGTTGTAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| CDS-3UTR CCA 90 bp | AACCTGGAGGCCATCTCAGTCCTGTTAATTTTGCTGACATCTTCCCAACCACATTACATGGGCCCTTTCTaGTACATTGTTCTTTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: NLEAISVLLILLTSSQPHYMGPF*YIVLFK Trigger: TTTAAAAAGAACAATGTACCAGAAAGGGCCCATGTA...ATGTGGTTGGGAAGATGTCAGCAAAATTAACAGGACTGAGATGGCCTCCAGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| CDS-3UTR CCA 90 bp | CGGAGGCATGTACCATACAAATTGACTGACATCTACCCATTTATTCCAGGCAAAGAGTCTAAAATGTTTTaGCAGATACTTATGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: RRHVPYKLTDIYPFIPGKESKMF*QILMTG Trigger: TCCAGTCATAAGTATCTGCCAAAACATTTTAGACTC...TTTGCCTGGAATAAATGGGTAGATGTCAGTCAATTTGTATGGTACATGCCTCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| 3UTR CAA 72 bp | AGCTATCATAAAAGTCGGAGGCATGTACCATACAAATaGACTGACATCTACCCATTTATTCCAGGCAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: SYHKSRRHVPYK*TDIYPFIPGKN Trigger: GTTTTTGCCTGGAATAAATGGGTAGATGTCAGTCAATTTGTATGGTACATGCCTCCGACTTTTATGATAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| CDS-3UTR CAA 90 bp | CAAACAGTAGTTCTACAACCTGGAGGCCATCTCAGTCCTGTTAATTTTGCTGACGTGAGCTCCTGGCTGTaGTTACATGGGCCCTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: QTVVLQPGGHLSPVNFADVSSWL*LHGPFL Trigger: CAGAAAGGGCCCATGTAACAACAGCCAGGAGCTCAC...GTCAGCAAAATTAACAGGACTGAGATGGCCTCCAGGTTGTAGAACTACTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| CDS-3UTR CAA 90 bp | GTTCTACAACCTGGAGGCCATCTCAGTCCTGTTAATTTTGCTGACATCTTCCCAGGCATCCTCTTTGTTTaGTTGAACCTGTTTGTAAGC | + |
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Preference number: 5 (lower is better) Translates to: VLQPGGHLSPVNFADIFPGILFV*LNLFVS Trigger: GCTTACAAACAGGTTCAACAAAACAAAGAGGATGCC...TGGGAAGATGTCAGCAAAATTAACAGGACTGAGATGGCCTCCAGGTTGTAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| CDS-3UTR CAA 90 bp | GTTCTACAACCTGGAGGCCATCTCAGTCCTGTTAATTTTGCTGACATCTTCCCAATCCTCTTTGTTTTGTaGAACCTGTTTGTAAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: VLQPGGHLSPVNFADIFPILFVL*NLFVSP Trigger: TGGGCTTACAAACAGGTTCAACAAAACAAAGAGGAT...TGGGAAGATGTCAGCAAAATTAACAGGACTGAGATGGCCTCCAGGTTGTAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| CDS-3UTR CAA 90 bp | GTTCTACAACCTGGAGGCCATCTCAGTCCTGTTAATTTTGCTGACATCTTCCCAGCCCTTTCTGGTACATaGTTCTTTTTAAATGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: VLQPGGHLSPVNFADIFPALSGT*FFLNVC Trigger: GCACACATTTAAAAAGAACAATGTACCAGAAAGGGC...TGGGAAGATGTCAGCAAAATTAACAGGACTGAGATGGCCTCCAGGTTGTAGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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| CDS GCA 72 bp | CAGTCAAAGGCATCGACGTGGACCGCGTGCTGCAAGTaGGAGAGCCCCGGTCTTTTCAGCATGCTCGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: QSKASTWTACCK*ESPGLFSMLVS Trigger: AGAGACGAGCATGCTGAAAAGACCGGGGCTCTCGCACTTGCAGCACGCGGTCCACGTCGATGCCTTTGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015796.9 |
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| CDS CCA 72 bp | TATGATGGCAGCGACTTTCACTGGCAAGCGCCAGTTTaGAAAGAATTCCTGCGTGTGCTGAAGCTCGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: YDGSDFHWQAPV*KEFLRVLKLGG Trigger: CCCTCCGAGCTTCAGCACACGCAGGAATTCTTTCCAAACTGGCGCTTGCCAGTGAAAGTCGCTGCCATCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015796.9 |
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| CDS TCA 72 bp | CCCTCAGAAGTGTGTACAGGAAAGTCAGGGATGATATaGTGGCAGCGACTTTCACTGGCAAGCGCCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: PSEVCTGKSGMI*WQRLSLASASL Trigger: CAAACTGGCGCTTGCCAGTGAAAGTCGCTGCCATCATATCATCCCTGACTTTCCTGTACACACTTCTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015796.9 |
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| CDS CCA 72 bp | ATGACTGGATTAAGTGAGCTCCTGGCTGTTGTTACATaGGCCCTTTCTGGTACATTGTTCTTTTTAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: MTGLSELLAVVT*ALSGTLFFLNV Trigger: CACATTTAAAAAGAACAATGTACCAGAAAGGGCCCATGTAACAACAGCCAGGAGCTCACTTAATCCAGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169542.2 |
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