Pregenerated sensors for STC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020303Ensembl transcript IDs: ENSMUST00000020546.3
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTTTCACCCTGCTCCCTAGAACAGGGAGCATGCTACCTATGGTCTaGGACACATCCAGCTGGGGGCCTGCTGAAGAGAACCTTAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: LFTLLPRTGSMLPMV*DTSSWGPAEENLSG Trigger: TCCACTAAGGTTCTCTTCAGCAGGCCCCCAGCTGGATGTGTCCCAGACCATAGGTAGCATGCTCCCTGTTCTAGGGAGCAGGGTGAAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR GCA 90 bp | GAGACCTTGCTGCCCGGGAATCTTCATCTCACCTGTTCACACACCTaGACGAAGTCCACAATTTGCACACATCCAGCGTGTGACATCCCC | + |
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Preference number: 1 (lower is better) Translates to: ETLLPGNLHLTCSHT*TKSTICTHPACDIP Trigger: GGGGATGTCACACGCTGGATGTGTGCAAATTGTGGACTTCGTGCAGGTGTGTGAACAGGTGAGATGAAGATTCCCGGGCAGCAAGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR CCA 90 bp | TTGGCCCTTCGTAGAAAAAGTTGGCCGAGCCTTGCTCTGGAGACCTaGCCCAGGATACCCTCCACTTCTCTAACACTGGCTGCCAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: LALRRKSWPSLALET*PRIPSTSLTLAAKR Trigger: TCTTTTGGCAGCCAGTGTTAGAGAAGTGGAGGGTATCCTGGGCCAGGTCTCCAGAGCAAGGCTCGGCCAACTTTTTCTACGAAGGGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR TCA 90 bp | GTGGAACAGAGCCAAATCTGTGTGGCAGAGGGTGCTTTTGTGCTATaGTGGCAGATCTGGCTATCGGCAGCAGAAACCATGCAGCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: VEQSQICVAEGAFVL*WQIWLSAAETMQLA Trigger: GGCAAGCTGCATGGTTTCTGCTGCCGATAGCCAGATCTGCCATCATAGCACAAAAGCACCCTCTGCCACACAGATTTGGCTCTGTTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR TCA 90 bp | GTGGCAAAGCCTGGCATGTTGGGCTTCCTTCCTTCCGGGCAGAACTaGCTAAATGCACACTCTCTTCTCTGCAGTCTCATACCTTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: VAKPGMLGFLPSGQN*LNAHSLLCSLIPFW Trigger: CCAGAAAGGTATGAGACTGCAGAGAAGAGAGTGTGCATTTAGTCAGTTCTGCCCGGAAGGAAGGAAGCCCAACATGCCAGGCTTTGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR GCA 90 bp | GCCTGGCATGTTGGGCTTCCTTCCTTCCGGGCAGAACTGACTAAATaGACACTCTCTTCTCTGCAGTCTCATACCTTTCTGGGGTTTTCC | + |
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Preference number: 1 (lower is better) Translates to: AWHVGLPSFRAELTK*TLSSLQSHTFLGFS Trigger: GGAAAACCCCAGAAAGGTATGAGACTGCAGAGAAGAGAGTGTGCATTTAGTCAGTTCTGCCCGGAAGGAAGGAAGCCCAACATGCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR CCA 90 bp | GCAGGCACATGGCACAAGAGTGCTACGATCTATATTCATTTCCTGTaGCAAAGCCTGGCATGTTGGGCTTCCTTCCTTCCGGGCAGAACT | + |
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Preference number: 1 (lower is better) Translates to: AGTWHKSATIYIHFL*QSLACWASFLPGRT Trigger: AGTTCTGCCCGGAAGGAAGGAAGCCCAACATGCCAGGCTTTGCCACAGGAAATGAATATAGATCGTAGCACTCTTGTGCCATGTGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR GCA 90 bp | TCTGGAGACCTGGCCCAGGATACCCTCCACTTCTCTAACACTGGCTaGCAAAAGACTGTGTCAGCCAAAGAGGAAGGAGATTATGATGTT | + |
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Preference number: 1 (lower is better) Translates to: SGDLAQDTLHFSNTG*QKTVSAKEEGDYDV Trigger: AACATCATAATCTCCTTCCTCTTTGGCTGACACAGTCTTTTGGCAGCCAGTGTTAGAGAAGTGGAGGGTATCCTGGGCCAGGTCTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR GCA 90 bp | GAAGAGAACCTTAGTGGAACAGAGCCAAATCTGTGTGGCAGAGGGTaGTTTTGTGCTATGATGGCAGATCTGGCTATCGGCAGCAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: EENLSGTEPNLCGRG*FCAMMADLAIGSRN Trigger: GTTTCTGCTGCCGATAGCCAGATCTGCCATCATAGCACAAAAGCACCCTCTGCCACACAGATTTGGCTCTGTTCCACTAAGGTTCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR GCA 90 bp | CTGACTGAGCAGTCCACGGGTTACTATTCTTCCTTAGGAAGTGGGTaGCAGCAACATTGTCTCCATGTTGTTTCAGAGATGCCACAGGTG | + |
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Preference number: 1 (lower is better) Translates to: LTEQSTGYYSSLGSG*QQHCLHVVSEMPQV Trigger: CACCTGTGGCATCTCTGAAACAACATGGAGACAATGTTGCTGGCACCCACTTCCTAAGGAAGAATAGTAACCCGTGGACTGCTCAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR CCA 90 bp | GAATTGAAACTCCCTAATTACTATTTGGCCCTTCGTAGAAAAAGTTaGCCGAGCCTTGCTCTGGAGACCTGGCCCAGGATACCCTCCACT | + |
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Preference number: 1 (lower is better) Translates to: ELKLPNYYLALRRKS*PSLALETWPRIPST Trigger: AGTGGAGGGTATCCTGGGCCAGGTCTCCAGAGCAAGGCTCGGCCAACTTTTTCTACGAAGGGCCAAATAGTAATTAGGGAGTTTCAATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR CCA 90 bp | CCCAGTTCAGACTCTGGGACAAGTGAGCAGCTGAGCCAGAAAGAATaGAGAATGTTTGTGAGTGATGTAAGCAGAAAGAGTCAAGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: PSSDSGTSEQLSQKE*RMFVSDVSRKSQGA Trigger: GGCACCTTGACTCTTTCTGCTTACATCACTCACAAACATTCTCCATTCTTTCTGGCTCAGCTGCTCACTTGTCCCAGAGTCTGAACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR GCA 90 bp | AACGTGTATGAAGCTGAGGCCCGAGGACGATCTCTTTTCAATGGCTaGCTTGCTTATGTTTTAAACTGTGCAAACAACTCCATCAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: NVYEAEARGRSLFNG*LAYVLNCANNSIRH Trigger: GTGCCTGATGGAGTTGTTTGCACAGTTTAAAACATAAGCAAGGCAGCCATTGAAAAGAGATCGTCCTCGGGCCTCAGCTTCATACACGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR CCA 90 bp | TCTATCCACACCTCTCTCCTTGTTGTTAAGTTTCCACTTTGGCCATaGAGAATAAGCTACTCGTCCAAGTATGCTGAGAGTGACATTCCC | + |
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Preference number: 1 (lower is better) Translates to: SIHTSLLVVKFPLWP*RISYSSKYAESDIP Trigger: GGGAATGTCACTCTCAGCATACTTGGACGAGTAGCTTATTCTCCATGGCCAAAGTGGAAACTTAACAACAAGGAGAGAGGTGTGGATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR CCA 90 bp | CTTTTGTCTATCCACACCTCTCTCCTTGTTGTTAAGTTTCCACTTTaGCCATGGAGAATAAGCTACTCGTCCAAGTATGCTGAGAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: LLSIHTSLLVVKFPL*PWRISYSSKYAESD Trigger: GTCACTCTCAGCATACTTGGACGAGTAGCTTATTCTCCATGGCCAAAGTGGAAACTTAACAACAAGGAGAGAGGTGTGGATAGACAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR GCA 90 bp | GGTGTTCAGATCATCTCATTAAGATTCCAAGCTCAAAATAAACACTaGATCTTTATTTGGAGACCCGCATCCTTCCTCACAGGGAGGCTA | + |
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Preference number: 1 (lower is better) Translates to: GVQIISLRFQAQNKH*IFIWRPASFLTGRL Trigger: TAGCCTCCCTGTGAGGAAGGATGCGGGTCTCCAAATAAAGATGCAGTGTTTATTTTGAGCTTGGAATCTTAATGAGATGATCTGAACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR GCA 90 bp | GGCCTGCTGTCTCCTATTCATTCCGCATTGAGCTGTCAAGGGTTTTaGTGTCTTTGGCCCTCTCATTTTAGAATAACAGGACTATTTATT | + |
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Preference number: 1 (lower is better) Translates to: GLLSPIHSALSCQGF*CLWPSHFRITGLFI Trigger: AATAAATAGTCCTGTTATTCTAAAATGAGAGGGCCAAAGACAGCAAAACCCTTGACAGCTCAATGCGGAATGAATAGGAGACAGCAGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR CCA 90 bp | TCTCCTATTCATTCCGCATTGAGCTGTCAAGGGTTTTGCTGTCTTTaGCCCTCTCATTTTAGAATAACAGGACTATTTATTGATACAAAA | + |
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Preference number: 1 (lower is better) Translates to: SPIHSALSCQGFCCL*PSHFRITGLFIDTK Trigger: TTTTGTATCAATAAATAGTCCTGTTATTCTAAAATGAGAGGGCCAAAGACAGCAAAACCCTTGACAGCTCAATGCGGAATGAATAGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGCCCTTCGTAGAAAAAGTTGGCCGAGCCTTGCTCTGGAGACCTGGCCCAGGCTGTGCAGACAGTACTaGGAACTGTGGGGGAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: LALRRKSWPSLALETWPRLCRQY*ELWGRV Trigger: AACCCTCCCCCACAGTTCCCAGTACTGTCTGCACAG...CCTGGGCCAGGTCTCCAGAGCAAGGCTCGGCCAACTTTTTCTACGAAGGGCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCCATGTTGTTTCAGAGATGCCACAGGTGGGATTGGAGATCCAGCATGTGGGGTGGGAAGAGGGGTaGGTAGTGCTCAGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CLHVVSEMPQVGLEIQHVGWEEG*VVLRGG Trigger: CCCACCCCTGAGCACTACCCACCCCTCTTCCCACCC...CACATGCTGGATCTCCAATCCCACCTGTGGCATCTCTGAAACAACATGGAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGAAGAGAACCTTAGTGGAACAGAGCCAAATCTGTGTGGCAGAGGGTGCTGGCCGAGCCTTGCTCTaGAGACCTGGCCCAGGATAC | + |
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Preference number: 2 (lower is better) Translates to: LLKRTLVEQSQICVAEGAGRALL*RPGPGY Trigger: GTATCCTGGGCCAGGTCTCCAGAGCAAGGCTCGGCC...AGCACCCTCTGCCACACAGATTTGGCTCTGTTCCACTAAGGTTCTCTTCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR CAA 90 bp | GCCTTCCTCTCTTCTCCCTCTTTGAGGACTGCGGAGGCCACAAAGTaGAATTCCAACTTGGCTGTACCGATCCAACGTACAGGCTCATGG | + |
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Preference number: 2 (lower is better) Translates to: AFLSSPSLRTAEATK*NSNLAVPIQRTGSW Trigger: CCATGAGCCTGTACGTTGGATCGGTACAGCCAAGTTGGAATTCAACTTTGTGGCCTCCGCAGTCCTCAAAGAGGGAGAAGAGAGGAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR TCA 90 bp | TTGGCCCTTCGTAGAAAAAGTTGGCCGAGCCTTGCTCTGGAGACCTGGCCCAGGAAGAAAGGCTGTGTGTaGAAGTCTCCCTCTAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: LALRRKSWPSLALETWPRKKGCV*KSPSRY Trigger: ATACCTAGAGGGAGACTTTCACACACAGCCTTTCTT...CCTGGGCCAGGTCTCCAGAGCAAGGCTCGGCCAACTTTTTCTACGAAGGGCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCTAACACTGGCTGCCAAAAGACTGTGTCAGCCAAAGAGGAAGGAGATTATGTTTACCACCCACCTGTaGCCCCTTCCCTCCCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: SLTLAAKRLCQPKRKEIMFTTHL*PLPSPA Trigger: AGCCGGGGAGGGAAGGGGCCACAGGTGGGTGGTAAA...CATAATCTCCTTCCTCTTTGGCTGACACAGTCTTTTGGCAGCCAGTGTTAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCTAACACTGGCTGCCAAAAGACTGTGTCAGCCAAAGAGGAAGGAGATTATGTGTTGGGGGCAGGGGTaGGGAAGAGACACCACGTGG | + |
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Preference number: 2 (lower is better) Translates to: SLTLAAKRLCQPKRKEIMCWGQG*GRDTTW Trigger: CCACGTGGTGTCTCTTCCCCACCCCTGCCCCCAACA...CATAATCTCCTTCCTCTTTGGCTGACACAGTCTTTTGGCAGCCAGTGTTAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR CAA 90 bp | AACGGTTTCCTTAGCGGTCCGGATGCCTTCCTCTCTTCTCCCTCTTaGAGGACTGCGGAGGCCACAAAGTTGAATTCCAACTTGGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: NGFLSGPDAFLSSPS*RTAEATKLNSNLAV Trigger: TACAGCCAAGTTGGAATTCAACTTTGTGGCCTCCGCAGTCCTCAAAGAGGGAGAAGAGAGGAAGGCATCCGGACCGCTAAGGAAACCGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGGGATTGGAGATCCAGCATGTGCATATGTGTGTAAGGACTGCTGGCCTGCGGAGGCCACAAAGTTaGATTCCAACTTGGCTGTAC | + |
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Preference number: 2 (lower is better) Translates to: QVGLEIQHVHMCVRTAGLRRPQS*IPTWLY Trigger: GTACAGCCAAGTTGGAATTCAACTTTGTGGCCTCCG...CAGGCCAGCAGTCCTTACACACATATGCACATGCTGGATCTCCAATCCCACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGAAGAGAACCTTAGTGGAACAGAGCCAAATCTGTGTGGCAGAGGGTGCTCCTCTCTGCTCTCTCTaGCTTGTCAGCTGTATCTCC | + |
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Preference number: 2 (lower is better) Translates to: LLKRTLVEQSQICVAEGAPLCSL*LVSCIS Trigger: GGAGATACAGCTGACAAGGCAGAGAGAGCAGAGAGG...AGCACCCTCTGCCACACAGATTTGGCTCTGTTCCACTAAGGTTCTCTTCAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR GCA 90 bp | GCCGAATTGAAACTCCCTAATTACTATTTGGCCCTTCGTAGAAAAAGTTGGCCGCCACGTGGGCAGTGCTaGTGTTCAGGGGCTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: AELKLPNYYLALRRKSWPPRGQC*CSGAAA Trigger: AGCAGCAGCCCCTGAACAGCAGCACTGCCCACGTGG...CGGCCAACTTTTTCTACGAAGGGCCAAATAGTAATTAGGGAGTTTCAATTCGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR GCA 90 bp | TCTCTAACACTGGCTGCCAAAAGACTGTGTCAGCCAAAGAGGAAGGAGATTATGCCAGCCCCTGCTCTGTaGAGACAGTACTGGGAACTG | + |
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Preference number: 2 (lower is better) Translates to: SLTLAAKRLCQPKRKEIMPAPAL*RQYWEL Trigger: CAGTTCCCAGTACTGTCTGCACAGAGCAGGGGCTGG...CATAATCTCCTTCCTCTTTGGCTGACACAGTCTTTTGGCAGCCAGTGTTAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR GCA 90 bp | TCTCTAACACTGGCTGCCAAAAGACTGTGTCAGCCAAAGAGGAAGGAGATTATGCCAGAACCCAGCCCCTaGTCTGTGCAGACAGTACTG | + |
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Preference number: 2 (lower is better) Translates to: SLTLAAKRLCQPKRKEIMPEPSP*SVQTVL Trigger: CAGTACTGTCTGCACAGAGCAGGGGCTGGGTTCTGG...CATAATCTCCTTCCTCTTTGGCTGACACAGTCTTTTGGCAGCCAGTGTTAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGCCTTGCTTATGTTTTAAACTGTGCAAACAACTCCATCAGGCACACAAGAGAATCATGGCCTTCTaGGGCCTCAGGGGCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: WLPCLCFKLCKQLHQAHKRIMAF*GLRGLP Trigger: TGGCAGGCCCCTGAGGCCGCAGAAGGCCATGATTCT...CTTGTGTGCCTGATGGAGTTGTTTGCACAGTTTAAAACATAAGCAAGGCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR CAA 90 bp | CAGCAACATTGTCTCCATGTTGTTTCAGAGATGCCACAGGTGGGATaGGAGATCCAGCATGTGCATATGTGTGTAAGGACTGCTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QQHCLHVVSEMPQVG*EIQHVHMCVRTAGL Trigger: CAGGCCAGCAGTCCTTACACACATATGCACATGCTGGATCTCCAATCCCACCTGTGGCATCTCTGAAACAACATGGAGACAATGTTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR CAA 90 bp | GTCCACGGGTTACTATTCTTCCTTAGGAAGTGGGTGCCAGCAACATaGTCTCCATGTTGTTTCAGAGATGCCACAGGTGGGATTGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: VHGLLFFLRKWVPAT*SPCCFRDATGGIGD Trigger: ATCTCCAATCCCACCTGTGGCATCTCTGAAACAACATGGAGACAATGTTGCTGGCACCCACTTCCTAAGGAAGAATAGTAACCCGTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR GCA 90 bp | AGGCGTGGGGAAATATACAACAGAGATCAGTCAGTGGGTTCAAATGAACAGAGGGCATGCTTTTCACCCTaGTCCCTAGAACAGGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: RRGEIYNRDQSVGSNEQRACFSP*SLEQGA Trigger: TGCTCCCTGTTCTAGGGAGCAGGGTGAAAAGCATGC...CCTCTGTTCATTTGAACCCACTGACTGATCTCTGTTGTATATTTCCCCACGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR CCA 90 bp | GCCGAATTGAAACTCCCTAATTACTATTTGGCCCTTCGTAGAAAAAGTTGGCCGGGTAGTGCTCAGGGGTaGGAAAGAAACGACGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: AELKLPNYYLALRRKSWPGSAQG*ERNDAH Trigger: ATGGGCGTCGTTTCTTTCCCACCCCTGAGCACTACC...CGGCCAACTTTTTCTACGAAGGGCCAAATAGTAATTAGGGAGTTTCAATTCGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGGGATTGGAGATCCAGCATGTGCATATGTGTGTAAGGACTGCTGGCCTGTATATTCATTTCCTGTaGCAAAGCCTGGCATGTTGG | + |
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Preference number: 2 (lower is better) Translates to: QVGLEIQHVHMCVRTAGLYIHFL*QSLACW Trigger: CCAACATGCCAGGCTTTGCCACAGGAAATGAATATA...CAGGCCAGCAGTCCTTACACACATATGCACATGCTGGATCTCCAATCCCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR TCA 90 bp | AGGCGTGGGGAAATATACAACAGAGATCAGTCAGTGGGTTCAAATGAACAGAGGGGTGCTTTTGTGCTATaGTGGCAGATCTGGCTATCG | + |
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Preference number: 2 (lower is better) Translates to: RRGEIYNRDQSVGSNEQRGAFVL*WQIWLS Trigger: CGATAGCCAGATCTGCCATCATAGCACAAAAGCACC...CCTCTGTTCATTTGAACCCACTGACTGATCTCTGTTGTATATTTCCCCACGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR GCA 90 bp | CTAACACTGGCTGCCAAAAGACTGTGTCAGCCAAAGAGGAAGGAGATTATGATGACGAAGTCCACAATTTaGACACATCCAGCGTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LTLAAKRLCQPKRKEIMMTKSTI*THPACD Trigger: GTCACACGCTGGATGTGTGCAAATTGTGGACTTCGT...CATCATAATCTCCTTCCTCTTTGGCTGACACAGTCTTTTGGCAGCCAGTGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR CCA 90 bp | AGGCGTGGGGAAATATACAACAGAGATCAGTCAGTGGGTTCAAATGAACAGAGGAGAAAATGGACAGCCTaGAGGAAAGCTTTCATGGCC | + |
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Preference number: 2 (lower is better) Translates to: RRGEIYNRDQSVGSNEQRRKWTA*RKAFMA Trigger: GGCCATGAAAGCTTTCCTCCAGGCTGTCCATTTTCT...CCTCTGTTCATTTGAACCCACTGACTGATCTCTGTTGTATATTTCCCCACGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGGGATTGGAGATCCAGCATGTGCATATGTGTGTAAGGACTGCTGGCCTGACGATCTCTTTTCAATaGCTGCCTTGCTTATGTTTT | + |
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Preference number: 2 (lower is better) Translates to: QVGLEIQHVHMCVRTAGLTISFQ*LPCLCF Trigger: AAAACATAAGCAAGGCAGCCATTGAAAAGAGATCGT...CAGGCCAGCAGTCCTTACACACATATGCACATGCTGGATCTCCAATCCCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR TCA 90 bp | GCCGAATTGAAACTCCCTAATTACTATTTGGCCCTTCGTAGAAAAAGTTGGCCGGATGTTGAGAACCTGTaGAGTCCCTTCTTTCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: AELKLPNYYLALRRKSWPDVENL*SPFFPL Trigger: AAGGGGAAAGAAGGGACTTCACAGGTTCTCAACATC...CGGCCAACTTTTTCTACGAAGGGCCAAATAGTAATTAGGGAGTTTCAATTCGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGCCTTGCTTATGTTTTAAACTGTGCAAACAACTCCATCAGGCACACAAGACCTGTTCACACACCTaGACGAAGTCCACAATTTGC | + |
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Preference number: 2 (lower is better) Translates to: WLPCLCFKLCKQLHQAHKTCSHT*TKSTIC Trigger: GCAAATTGTGGACTTCGTGCAGGTGTGTGAACAGGT...CTTGTGTGCCTGATGGAGTTGTTTGCACAGTTTAAAACATAAGCAAGGCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGCCTTGCTTATGTTTTAAACTGTGCAAACAACTCCATCAGGCACACAAGGTAGGTCAGAATGCATaGTTTTCACCCTGCTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: WLPCLCFKLCKQLHQAHKVGQNA*FSPCSL Trigger: TAGGGAGCAGGGTGAAAAGCATGCATTCTGACCTAC...CTTGTGTGCCTGATGGAGTTGTTTGCACAGTTTAAAACATAAGCAAGGCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCTAACACTGGCTGCCAAAAGACTGTGTCAGCCAAAGAGGAAGGAGATTATGGGGCTAGGGTTGGTTTaGTTTTCTTCCTTCTCTAAC | + |
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Preference number: 2 (lower is better) Translates to: SLTLAAKRLCQPKRKEIMGLGLV*FSSFSN Trigger: GTTAGAGAAGGAAGAAAACCAAACCAACCCTAGCCC...CATAATCTCCTTCCTCTTTGGCTGACACAGTCTTTTGGCAGCCAGTGTTAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| 3UTR-3UTR CCA 90 bp | AGTGGAACAGAGCCAAATCTGTGTGGCAGAGGGTGCTTTTGTGCTATGATGGCAGTTAAGTTTCCACTTTaGCCATGGAGAATAAGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SGTEPNLCGRGCFCAMMAVKFPL*PWRISY Trigger: GTAGCTTATTCTCCATGGCCAAAGTGGAAACTTAAC...TGCCATCATAGCACAAAAGCACCCTCTGCCACACAGATTTGGCTCTGTTCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR-3UTR CCA 90 bp | GGGACAAGTGAGCAGCTGAGCCAGAAAGAATGGAGAATGTTTGTGAGTGATGTAAGTCTCATACCTTTCTaGGGTTTTCCTAGCATGTCG | + |
|
Preference number: 2 (lower is better) Translates to: GTSEQLSQKEWRMFVSDVSLIPF*GFPSMS Trigger: CGACATGCTAGGAAAACCCCAGAAAGGTATGAGACT...TACATCACTCACAAACATTCTCCATTCTTTCTGGCTCAGCTGCTCACTTGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR-3UTR CCA 90 bp | GGGTTGGTTTGGTTTTCTTCCTTCTCTAACCTGGTTTTTGTGACCCAGTTGTTTCCCCAGACAGAACAATaGCTCAGAAATGACACACAG | + |
|
Preference number: 2 (lower is better) Translates to: GLVWFSSFSNLVFVTQLFPQTEQ*LRNDTQ Trigger: CTGTGTGTCATTTCTGAGCCATTGTTCTGTCTGGGG...AAACAACTGGGTCACAAAAACCAGGTTAGAGAAGGAAGAAAACCAAACCAACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTGCTTATGTTTTAAACTGTGCAAACAACTCCATCAGGCACACAAGACTTCAGGTGAGCACAAGACACTaGAAAACCCAGTTCAGACTC | + |
|
Preference number: 2 (lower is better) Translates to: LAYVLNCANNSIRHTRLQVSTRH*KTQFRL Trigger: GAGTCTGAACTGGGTTTTTCAGTGTCTTGTGCTCAC...CTGAAGTCTTGTGTGCCTGATGGAGTTGTTTGCACAGTTTAAAACATAAGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGACAAGTGAGCAGCTGAGCCAGAAAGAATGGAGAATGTTTGTGAGTGATGTAAGCCATTTATTTAGATaGCAGACACATAGATGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GTSEQLSQKEWRMFVSDVSHLFR*QTHRCQ Trigger: CTGACATCTATGTGTCTGTCATCTAAATAAATGGCT...TACATCACTCACAAACATTCTCCATTCTTTCTGGCTCAGCTGCTCACTTGTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CAA 90 bp | AACTGTGCAAACAACTCCATCAGGCACACAAGACTTCAGACAGTTTaGAGCAAAGGGGCCCGAGAGATAAATATATTCCACATTTCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: NCANNSIRHTRLQTV*SKGAREINIFHISN Trigger: ATTAGAAATGTGGAATATATTTATCTCTCGGGCCCCTTTGCTCAAAACTGTCTGAAGTCTTGTGTGCCTGATGGAGTTGTTTGCACAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTGCTTATGTTTTAAACTGTGCAAACAACTCCATCAGGCACACAAGACTTCAGGAGAATGTTTGTGAGTaGTGTAAGCAGAAAGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LAYVLNCANNSIRHTRLQENVCE*CKQKES Trigger: TGACTCTTTCTGCTTACATCACTCACAAACATTCTC...CTGAAGTCTTGTGTGCCTGATGGAGTTGTTTGCACAGTTTAAAACATAAGCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CAA 90 bp | TTGGTTTGGTTTTCTTCCTTCTCTAACCTGGTTTTTGTGACCCAGTaGTTTGGTTTGAAAGCCATTTATTTAGATGACAGACACATAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LVWFSSFSNLVFVTQ*FGLKAIYLDDRHID Trigger: ATCTATGTGTCTGTCATCTAAATAAATGGCTTTCAAACCAAACAACTGGGTCACAAAAACCAGGTTAGAGAAGGAAGAAAACCAAACCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | TCACCCTGCTCCCTAGAACAGGGAGCATGCTACCTATaGTCTGGGACACATCCAGCTGGGGGCCTGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SPCSLEQGACYL*SGTHPAGGLLK Trigger: CTTCAGCAGGCCCCCAGCTGGATGTGTCCCAGACCATAGGTAGCATGCTCCCTGTTCTAGGGAGCAGGGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | CACCAGCTGAGTTTGGGGGAAGTGCTTAGAGAATCATaGCCTTCTGCGGCCTCAGGGGCCTGCCAGGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HQLSLGEVLRES*PSAASGACQGE Trigger: TTCTCCCTGGCAGGCCCCTGAGGCCGCAGAAGGCCATGATTCTCTAAGCACTTCCCCCAAACTCAGCTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | CTGCTCCCTAGAACAGGGAGCATGCTACCTATGGTCTaGGACACATCCAGCTGGGGGCCTGCTGAAGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLPRTGSMLPMV*DTSSWGPAEEN Trigger: GTTCTCTTCAGCAGGCCCCCAGCTGGATGTGTCCCAGACCATAGGTAGCATGCTCCCTGTTCTAGGGAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | CGGCCTCAGGGGCCTGCCAGGGAGAAGAAGGGTAGTTaGGTAGGTAGGTCAGAATGCATGCTTTTCACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RPQGPAREKKGS*VGRSECMLFTL Trigger: CAGGGTGAAAAGCATGCATTCTGACCTACCTACCCAACTACCCTTCTTCTCCCTGGCAGGCCCCTGAGGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | GGGAGCATGCTACCTATGGTCTGGGACACATCCAGCTaGGGGCCTGCTGAAGAGAACCTTAGTGGAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GSMLPMVWDTSS*GPAEENLSGTE Trigger: CTCTGTTCCACTAAGGTTCTCTTCAGCAGGCCCCCAGCTGGATGTGTCCCAGACCATAGGTAGCATGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR TCA 72 bp | GATCCCATGCACGACACTAAACTTCCGGTTTGGGACTaGGTGGGGCTAAGCCCTTCCTCCTCTCTGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: DPMHDTKLPVWD*VGLSPSSSLLS Trigger: AGAGAGCAGAGAGGAGGAAGGGCTTAGCCCCACTCAGTCCCAAACCGGAAGTTTAGTGTCGTGCATGGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR GCA 72 bp | TTACACAGGTGCCAACCCACCAGGCACTCGAGACCTTaGTGCCCGGGAATCTTCATCTCACCTGTTCACACA | + |
|
Preference number: 3 (lower is better) Translates to: LHRCQPTRHSRP*CPGIFISPVHT Trigger: TGTGTGAACAGGTGAGATGAAGATTCCCGGGCAGCAAGGTCTCGAGTGCCTGGTGGGTTGGCACCTGTGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR GCA 72 bp | AGGGAGAAGAAGGGTAGTTGGGTAGGTAGGTCAGAATaGATGCTTTTCACCCTGCTCCCTAGAACAGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: REKKGSWVGRSE*MLFTLLPRTGS Trigger: GCTCCCTGTTCTAGGGAGCAGGGTGAAAAGCATGCATTCTGACCTACCTACCCAACTACCCTTCTTCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTCCATGTTGTTTCAGAGATGCCACAGGTGGGATTGGAGATCCAGCATGTGACAGGCTCATGGACCTaGACTGGGATCAAGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CLHVVSEMPQVGLEIQHVTGSWT*TGIKLR Trigger: TCTCAGCTTGATCCCAGTCAAGGTCCATGAGCCTGT...CACATGCTGGATCTCCAATCCCACCTGTGGCATCTCTGAAACAACATGGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR TCA 72 bp | AGCCAAATCTGTGTGGCAGAGGGTGCTTTTGTGCTATaGTGGCAGATCTGGCTATCGGCAGCAGAAACCATG | + |
|
Preference number: 3 (lower is better) Translates to: SQICVAEGAFVL*WQIWLSAAETM Trigger: CATGGTTTCTGCTGCCGATAGCCAGATCTGCCATCATAGCACAAAAGCACCCTCTGCCACACAGATTTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR TCA 72 bp | CCTGGCATGTTGGGCTTCCTTCCTTCCGGGCAGAACTaGCTAAATGCACACTCTCTTCTCTGCAGTCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: PGMLGFLPSGQN*LNAHSLLCSLI Trigger: TATGAGACTGCAGAGAAGAGAGTGTGCATTTAGTCAGTTCTGCCCGGAAGGAAGGAAGCCCAACATGCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR GCA 72 bp | CTTAGTGGAACAGAGCCAAATCTGTGTGGCAGAGGGTaGTTTTGTGCTATGATGGCAGATCTGGCTATCGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSGTEPNLCGRG*FCAMMADLAIG Trigger: GCCGATAGCCAGATCTGCCATCATAGCACAAAAGCACCCTCTGCCACACAGATTTGGCTCTGTTCCACTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | CTCCCTAATTACTATTTGGCCCTTCGTAGAAAAAGTTaGCCGAGCCTTGCTCTGGAGACCTGGCCCAGGATA | + |
|
Preference number: 3 (lower is better) Translates to: LPNYYLALRRKS*PSLALETWPRI Trigger: TATCCTGGGCCAGGTCTCCAGAGCAAGGCTCGGCCAACTTTTTCTACGAAGGGCCAAATAGTAATTAGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | AATGCACACTCTCTTCTCTGCAGTCTCATACCTTTCTaGGGTTTTCCTAGCATGTCGCCAGCTCTTCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: NAHSLLCSLIPF*GFPSMSPALPS Trigger: GGAGGGAAGAGCTGGCGACATGCTAGGAAAACCCCAGAAAGGTATGAGACTGCAGAGAAGAGAGTGTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | GTGCTACGATCTATATTCATTTCCTGTGGCAAAGCCTaGCATGTTGGGCTTCCTTCCTTCCGGGCAGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: VLRSIFISCGKA*HVGLPSFRAEL Trigger: CAGTTCTGCCCGGAAGGAAGGAAGCCCAACATGCCAGGCTTTGCCACAGGAAATGAATATAGATCGTAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | GGAGATCCAGCATGTGCATATGTGTGTAAGGACTGCTaGCCTGCTGTCTCCTATTCATTCCGCATTGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GDPACAYVCKDC*PAVSYSFRIEL Trigger: CAGCTCAATGCGGAATGAATAGGAGACAGCAGGCCAGCAGTCCTTACACACATATGCACATGCTGGATCTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR TCA 72 bp | GCAGCTGAGCCAGAAAGAATGGAGAATGTTTGTGAGTaGTGTAAGCAGAAAGAGTCAAGGTGCCACGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AAEPERMENVCE*CKQKESRCHAG Trigger: GCCTGCGTGGCACCTTGACTCTTTCTGCTTACATCACTCACAAACATTCTCCATTCTTTCTGGCTCAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR GCA 72 bp | AACAGAGCCAAATCTGTGTGGCAGAGGGTGCTTTTGTaGTATGATGGCAGATCTGGCTATCGGCAGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NRAKSVWQRVLL*YDGRSGYRQQK Trigger: TTTCTGCTGCCGATAGCCAGATCTGCCATCATAGCACAAAAGCACCCTCTGCCACACAGATTTGGCTCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR GCA 72 bp | GTTGGGCTTCCTTCCTTCCGGGCAGAACTGACTAAATaGACACTCTCTTCTCTGCAGTCTCATACCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VGLPSFRAELTK*TLSSLQSHTFL Trigger: CAGAAAGGTATGAGACTGCAGAGAAGAGAGTGTGCATTTAGTCAGTTCTGCCCGGAAGGAAGGAAGCCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | TGGCACAAGAGTGCTACGATCTATATTCATTTCCTGTaGCAAAGCCTGGCATGTTGGGCTTCCTTCCTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: WHKSATIYIHFL*QSLACWASFLP Trigger: CGGAAGGAAGGAAGCCCAACATGCCAGGCTTTGCCACAGGAAATGAATATAGATCGTAGCACTCTTGTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCAAAGAGGAAGGAGATTATGATGTTGAGAACCTGTGAAGTCCCTTCTTTCTCTGCTCTCTCTGCCTaGTCAGCTGTATCTCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: QPKRKEIMMLRTCEVPSFSALSA*SAVSPL Trigger: GAGTGGAGATACAGCTGACAAGGCAGAGAGAGCAGA...GAAAGAAGGGACTTCACAGGTTCTCAACATCATAATCTCCTTCCTCTTTGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTCCATGTTGTTTCAGAGATGCCACAGGTGGGATTGGAGATCCAGCATGTGTCCACACCTCTCTCCTaGTTGTTAAGTTTCCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: CLHVVSEMPQVGLEIQHVSTPLS*LLSFHF Trigger: AAAGTGGAAACTTAACAACAAGGAGAGAGGTGTGGA...CACATGCTGGATCTCCAATCCCACCTGTGGCATCTCTGAAACAACATGGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR TCA 72 bp | ATGAGAGATGGAGGTCCTTTATACAGAGACACCAGCTaGGTTTGGGGGAAGTGCTTAGAGAATCATGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: MRDGGPLYRDTS*VWGKCLENHGL Trigger: AAGGCCATGATTCTCTAAGCACTTCCCCCAAACTCAGCTGGTGTCTCTGTATAAAGGACCTCCATCTCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR GCA 72 bp | GAAGCTGAGGCCCGAGGACGATCTCTTTTCAATGGCTaGCTTGCTTATGTTTTAAACTGTGCAAACAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: EAEARGRSLFNG*LAYVLNCANNS Trigger: GGAGTTGTTTGCACAGTTTAAAACATAAGCAAGGCAGCCATTGAAAAGAGATCGTCCTCGGGCCTCAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR GCA 72 bp | CAGTCCACGGGTTACTATTCTTCCTTAGGAAGTGGGTaGCAGCAACATTGTCTCCATGTTGTTTCAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: QSTGYYSSLGSG*QQHCLHVVSEM Trigger: CATCTCTGAAACAACATGGAGACAATGTTGCTGGCACCCACTTCCTAAGGAAGAATAGTAACCCGTGGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | TGTAAGCAGAAAGAGTCAAGGTGCCACGCAGGCACATaGCACAAGAGTGCTACGATCTATATTCATTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CKQKESRCHAGT*HKSATIYIHFL Trigger: CAGGAAATGAATATAGATCGTAGCACTCTTGTGCCATGTGCCTGCGTGGCACCTTGACTCTTTCTGCTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | GACTCTGGGACAAGTGAGCAGCTGAGCCAGAAAGAATaGAGAATGTTTGTGAGTGATGTAAGCAGAAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: DSGTSEQLSQKE*RMFVSDVSRKS Trigger: ACTCTTTCTGCTTACATCACTCACAAACATTCTCCATTCTTTCTGGCTCAGCTGCTCACTTGTCCCAGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCTTATGTTTTAAACTGTGCAAACAACTCCATCAGGCACACAAGACTTCAGGCGGAGGCCACAAAGTaGAATTCCAACTTGGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LAYVLNCANNSIRHTRLQAEATK*NSNLAV Trigger: TACAGCCAAGTTGGAATTCAACTTTGTGGCCTCCGC...CTGAAGTCTTGTGTGCCTGATGGAGTTGTTTGCACAGTTTAAAACATAAGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | ACCTCTCTCCTTGTTGTTAAGTTTCCACTTTGGCCATaGAGAATAAGCTACTCGTCCAAGTATGCTGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TSLLVVKFPLWP*RISYSSKYAES Trigger: ACTCTCAGCATACTTGGACGAGTAGCTTATTCTCCATGGCCAAAGTGGAAACTTAACAACAAGGAGAGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CCA 72 bp | ATCCACACCTCTCTCCTTGTTGTTAAGTTTCCACTTTaGCCATGGAGAATAAGCTACTCGTCCAAGTATGCT | + |
|
Preference number: 3 (lower is better) Translates to: IHTSLLVVKFPL*PWRISYSSKYA Trigger: AGCATACTTGGACGAGTAGCTTATTCTCCATGGCCAAAGTGGAAACTTAACAACAAGGAGAGAGGTGTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR GCA 72 bp | TCTCCTATTCATTCCGCATTGAGCTGTCAAGGGTTTTaGTGTCTTTGGCCCTCTCATTTTAGAATAACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SPIHSALSCQGF*CLWPSHFRITG Trigger: TCCTGTTATTCTAAAATGAGAGGGCCAAAGACAGCAAAACCCTTGACAGCTCAATGCGGAATGAATAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR GCA 72 bp | TCTTTTCAATGGCTGCCTTGCTTATGTTTTAAACTGTaGAAACAACTCCATCAGGCACACAAGACTTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SFQWLPCLCFKL*KQLHQAHKTSD Trigger: GTCTGAAGTCTTGTGTGCCTGATGGAGTTGTTTGCACAGTTTAAAACATAAGCAAGGCAGCCATTGAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR GCA 72 bp | ATCATCTCATTAAGATTCCAAGCTCAAAATAAACACTaGATCTTTATTTGGAGACCCGCATCCTTCCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: IISLRFQAQNKH*IFIWRPASFLT Trigger: TGTGAGGAAGGATGCGGGTCTCCAAATAAAGATGCAGTGTTTATTTTGAGCTTGGAATCTTAATGAGATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCCTGCTCTGTGCAGACAGTACTGGGAACTGTGGGGGAGGGTTTACCACTGCAGAAACTCAGGATaGAGCAGAGGCCTCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAPALCRQYWELWGRVYHCRNSG*SRGLPS Trigger: GCTGGGGAGGCCTCTGCTCCATCCTGAGTTTCTGCA...GTGGTAAACCCTCCCCCACAGTTCCCAGTACTGTCTGCACAGAGCAGGGGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR GCA 90 bp | CCGCCAATAAGCTTACACAGGTGCCAACCCACCAGGCACTCGAGACCTTGCTGCGACGTTCTCCTGGGCTaGGGAGCACAGGTCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPISLHRCQPTRHSRPCCDVLLG*GAQVML Trigger: AAGCATGACCTGTGCTCCGCAGCCCAGGAGAACGTC...GCAGCAAGGTCTCGAGTGCCTGGTGGGTTGGCACCTGTGTAAGCTTATTGGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR GCA 90 bp | CCGCCAATAAGCTTACACAGGTGCCAACCCACCAGGCACTCGAGACCTTGCTGCATCTCCGCTGTGTTCTaGAGGGACAGACGGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPISLHRCQPTRHSRPCCISAVF*RDRRPF Trigger: GAAAGGCCGTCTGTCCCTGCAGAACACAGCGGAGAT...GCAGCAAGGTCTCGAGTGCCTGGTGGGTTGGCACCTGTGTAAGCTTATTGGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CCA 90 bp | CTGCTGAAGAGAACCTTAGTGGAACAGAGCCAAATCTGTGTGGCAGAGGGTGCTGCGCCGGGTCCAAGGTaGCAAACACCAAAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLKRTLVEQSQICVAEGAAPGPR*QTPKPG Trigger: CCCTGGCTTTGGTGTTTGCCACCTTGGACCCGGCGC...AGCACCCTCTGCCACACAGATTTGGCTCTGTTCCACTAAGGTTCTCTTCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CAA 72 bp | CTTACACAGGTGCCAACCCACCAGGCACTCGAGACCTaGCTGCCCGGGAATCTTCATCTCACCTGTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LTQVPTHQALET*LPGNLHLTCSH Trigger: GTGTGAACAGGTGAGATGAAGATTCCCGGGCAGCAAGGTCTCGAGTGCCTGGTGGGTTGGCACCTGTGTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGGATTGGAGATCCAGCATGTGCATATGTGTGTAAGGACTGCTGGCCTGCTGTTGGCTGTTAGGTaGTGGTCTGTGTCCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVGLEIQHVHMCVRTAGLLLAVR*WSVSRW Trigger: CCACCGGGACACAGACCATCACCTAACAGCCAACAG...CAGGCCAGCAGTCCTTACACACATATGCACATGCTGGATCTCCAATCCCACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR GCA 90 bp | CAGGTGGGATTGGAGATCCAGCATGTGCATATGTGTGTAAGGACTGCTGGCCTGAGACGGCCTTTCTGCTaGGAGCTCCTGTCTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVGLEIQHVHMCVRTAGLRRPFC*ELLSWG Trigger: TCCCCAAGACAGGAGCTCGCAGCAGAAAGGCCGTCT...CAGGCCAGCAGTCCTTACACACATATGCACATGCTGGATCTCCAATCCCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CCA 90 bp | TCTCTAACACTGGCTGCCAAAAGACTGTGTCAGCCAAAGAGGAAGGAGATTATGGCCAGGGTCACAAACTaGCCCAGCCGCTCCGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLTLAAKRLCQPKRKEIMARVTN*PSRSAH Trigger: GTGTGCGGAGCGGCTGGGCCAGTTTGTGACCCTGGC...CATAATCTCCTTCCTCTTTGGCTGACACAGTCTTTTGGCAGCCAGTGTTAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CAA 72 bp | CTTAGCGGTCCGGATGCCTTCCTCTCTTCTCCCTCTTaGAGGACTGCGGAGGCCACAAAGTTGAATTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSGPDAFLSSPS*RTAEATKLNSN Trigger: GTTGGAATTCAACTTTGTGGCCTCCGCAGTCCTCAAAGAGGGAGAAGAGAGGAAGGCATCCGGACCGCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR TCA 90 bp | CATGTCCCCTCCAGCAGCTCTGAAACACTAGATCCCATGCACGACACTAAACTTCCACGTCCCCGGCATTaGCCAAACAGTGCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: HVPSSSSETLDPMHDTKLPRPRH*PNSAGS Trigger: AGATCCAGCACTGTTTGGTCAATGCCGGGGACGTGG...AAGTTTAGTGTCGTGCATGGGATCTAGTGTTTCAGAGCTGCTGGAGGGGACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR GCA 90 bp | TGTCTCCATGTTGTTTCAGAGATGCCACAGGTGGGATTGGAGATCCAGCATGTGGACAGACGGCCTTTCTaGTGCGAGCTCCTGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLHVVSEMPQVGLEIQHVDRRPF*CELLSW Trigger: CCAAGACAGGAGCTCGCAGCAGAAAGGCCGTCTGTC...CACATGCTGGATCTCCAATCCCACCTGTGGCATCTCTGAAACAACATGGAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR GCA 90 bp | AGGCGTGGGGAAATATACAACAGAGATCAGTCAGTGGGTTCAAATGAACAGAGGGAGCTGAGCCCTGTCTaGCAGGGGCTGATGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRGEIYNRDQSVGSNEQRELSPV*QGLMLW Trigger: CCAGAGCATCAGCCCCTGGCAGACAGGGCTCAGCTC...CCTCTGTTCATTTGAACCCACTGACTGATCTCTGTTGTATATTTCCCCACGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR GCA 90 bp | AGTGGAACAGAGCCAAATCTGTGTGGCAGAGGGTGCTTTTGTGCTATGATGGCACATTCGGGTGGCTTTTaGTCCCTCGCTCACCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTEPNLCGRGCFCAMMAHSGGF*SLAHPW Trigger: CCAAGGGTGAGCGAGGGAGCAAAAGCCACCCGAATG...TGCCATCATAGCACAAAAGCACCCTCTGCCACACAGATTTGGCTCTGTTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR GCA 90 bp | CACAGAAAATGTACCATCCATGTCCCCTCCAGCAGCTCTGAAACACTAGATCCCCATCCTCCCACTCACTaGTTCCAGAGGGTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HRKCTIHVPSSSSETLDPHPPTH*FQRVPE Trigger: CTCAGGGACCCTCTGGAAGCAGTGAGTGGGAGGATG...GGGATCTAGTGTTTCAGAGCTGCTGGAGGGGACATGGATGGTACATTTTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CAA 72 bp | TGGAACAGAGCCAAATCTGTGTGGCAGAGGGTGCTTTaGTGCTATGATGGCAGATCTGGCTATCGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WNRAKSVWQRVL*CYDGRSGYRQQ Trigger: CTGCTGCCGATAGCCAGATCTGCCATCATAGCACAAAAGCACCCTCTGCCACACAGATTTGGCTCTGTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CCA 90 bp | CTAACACTGGCTGCCAAAAGACTGTGTCAGCCAAAGAGGAAGGAGATTATGATGTGCGAGCTCCTGTCTTaGGGACCTTCCGGAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLAAKRLCQPKRKEIMMCELLS*GPSGGF Trigger: GAACCCTCCGGAAGGTCCCCAAGACAGGAGCTCGCA...CATCATAATCTCCTTCCTCTTTGGCTGACACAGTCTTTTGGCAGCCAGTGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR GCA 90 bp | GGTCCGGATGCCTTCCTCTCTTCTCCCTCTTTGAGGACTGCGGAGGCCACAAAGAATTTTCCAGCGTTGTaGAGAAACGTCATGCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GPDAFLSSPSLRTAEATKNFPAL*RNVMQI Trigger: GATTTGCATGACGTTTCTGCACAACGCTGGAAAATT...CTTTGTGGCCTCCGCAGTCCTCAAAGAGGGAGAAGAGAGGAAGGCATCCGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTCCATGTTGTTTCAGAGATGCCACAGGTGGGATTGGAGATCCAGCATGTGGGCATCCTTGATGAATaGCTTTCCCTGGGCATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLHVVSEMPQVGLEIQHVGILDE*LSLGIE Trigger: TTCGATGCCCAGGGAAAGTCATTCATCAAGGATGCC...CACATGCTGGATCTCCAATCCCACCTGTGGCATCTCTGAAACAACATGGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CCA 90 bp | AGGCGTGGGGAAATATACAACAGAGATCAGTCAGTGGGTTCAAATGAACAGAGGTCCCTCGCTCACCCTTaGCACCTCTGTTGGCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RRGEIYNRDQSVGSNEQRSLAHP*HLCWLL Trigger: TAACAGCCAACAGAGGTGCCAAGGGTGAGCGAGGGA...CCTCTGTTCATTTGAACCCACTGACTGATCTCTGTTGTATATTTCCCCACGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CAA 72 bp | TCTTCTCCCTCTTTGAGGACTGCGGAGGCCACAAAGTaGAATTCCAACTTGGCTGTACCGATCCAACGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SSPSLRTAEATK*NSNLAVPIQRT Trigger: TGTACGTTGGATCGGTACAGCCAAGTTGGAATTCAACTTTGTGGCCTCCGCAGTCCTCAAAGAGGGAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CAA 72 bp | AGATGGAGGTCCTTTATACAGAGACACCAGCTGAGTTaGGGGGAAGTGCTTAGAGAATCATGGCCTTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RWRSFIQRHQLS*GEVLRESWPSA Trigger: CGCAGAAGGCCATGATTCTCTAAGCACTTCCCCCAAACTCAGCTGGTGTCTCTGTATAAAGGACCTCCATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CCA 90 bp | GGGTTGGTTTGGTTTTCTTCCTTCTCTAACCTGGTTTTTGTGACCCAGTTGTTTGCATGGGCATTCGGGTaGCTTTTGCTCCCTCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLVWFSSFSNLVFVTQLFAWAFG*LLLPRS Trigger: TGAGCGAGGGAGCAAAAGCCACCCGAATGCCCATGC...AAACAACTGGGTCACAAAAACCAGGTTAGAGAAGGAAGAAAACCAAACCAACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR TCA 90 bp | CACAGAAAATGTACCATCCATGTCCCCTCCAGCAGCTCTGAAACACTAGATCCCGCAGCAGGAGATCCTTaGAATGAATCATCTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: HRKCTIHVPSSSSETLDPAAGDP*NESSPQ Trigger: TTGTGGAGATGATTCATTTCAAGGATCTCCTGCTGC...GGGATCTAGTGTTTCAGAGCTGCTGGAGGGGACATGGATGGTACATTTTCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR GCA 90 bp | TCTCTAACACTGGCTGCCAAAAGACTGTGTCAGCCAAAGAGGAAGGAGATTATGGCATTGACCAAACAGTaGTGGATCTCCGCTGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLTLAAKRLCQPKRKEIMALTKQ*WISAVF Trigger: GAACACAGCGGAGATCCAGCACTGTTTGGTCAATGC...CATAATCTCCTTCCTCTTTGGCTGACACAGTCTTTTGGCAGCCAGTGTTAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CCA 90 bp | CTAACACTGGCTGCCAAAAGACTGTGTCAGCCAAAGAGGAAGGAGATTATGATGTTGACCAAACAGTGCTaGATCTCCGCTGTGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLAAKRLCQPKRKEIMMLTKQC*ISAVFC Trigger: GCAGAACACAGCGGAGATCCAGCACTGTTTGGTCAA...CATCATAATCTCCTTCCTCTTTGGCTGACACAGTCTTTTGGCAGCCAGTGTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CCA 90 bp | CACAGAAAATGTACCATCCATGTCCCCTCCAGCAGCTCTGAAACACTAGATCCCATGAATGACTTTCCCTaGGCATCGAATTTTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: HRKCTIHVPSSSSETLDPMNDFP*ASNFPA Trigger: CGCTGGAAAATTCGATGCCCAGGGAAAGTCATTCAT...GGGATCTAGTGTTTCAGAGCTGCTGGAGGGGACATGGATGGTACATTTTCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CCA 90 bp | AGTGGAACAGAGCCAAATCTGTGTGGCAGAGGGTGCTTTTGTGCTATGATGGCACATTTCCCTAATTGCTaGACACTTCCTGCTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGTEPNLCGRGCFCAMMAHFPNC*TLPADA Trigger: TGCATCAGCAGGAAGTGTCCAGCAATTAGGGAAATG...TGCCATCATAGCACAAAAGCACCCTCTGCCACACAGATTTGGCTCTGTTCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGCCTTGCTTATGTTTTAAACTGTGCAAACAACTCCATCAGGCACACAAGCCTTGGCACCTCTGTTaGCTGTTAGGTGATGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLPCLCFKLCKQLHQAHKPWHLC*LLGDGL Trigger: CAGACCATCACCTAACAGCCAACAGAGGTGCCAAGG...CTTGTGTGCCTGATGGAGTTGTTTGCACAGTTTAAAACATAAGCAAGGCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR TCA 90 bp | CTGCTGAAGAGAACCTTAGTGGAACAGAGCCAAATCTGTGTGGCAGAGGGTGCTAGGAGATCCTTGAAATaGATCATCTCCACAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLKRTLVEQSQICVAEGARRSLK*IISTIT Trigger: TGTGATTGTGGAGATGATTCATTTCAAGGATCTCCT...AGCACCCTCTGCCACACAGATTTGGCTCTGTTCCACTAAGGTTCTCTTCAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CAA 72 bp | TTACTATTCTTCCTTAGGAAGTGGGTGCCAGCAACATaGTCTCCATGTTGTTTCAGAGATGCCACAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLFFLRKWVPAT*SPCCFRDATGG Trigger: CCCACCTGTGGCATCTCTGAAACAACATGGAGACAATGTTGCTGGCACCCACTTCCTAAGGAAGAATAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CAA 72 bp | AGACTGTGTCAGCCAAAGAGGAAGGAGATTATGATGTaGAGAACCTGTGAAGTCCCTTCTTTCCCCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLCQPKRKEIMM*RTCEVPSFPFD Trigger: GTCAAAGGGGAAAGAAGGGACTTCACAGGTTCTCAACATCATAATCTCCTTCCTCTTTGGCTGACACAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTGCCTTGCTTATGTTTTAAACTGTGCAAACAACTCCATCAGGCACACAAGTCTGTATATTGGAGGTaGAGAAACTCAGGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WLPCLCFKLCKQLHQAHKSVYWR*RNSGWS Trigger: GCTCCATCCTGAGTTTCTGCACCTCCAATATACAGA...CTTGTGTGCCTGATGGAGTTGTTTGCACAGTTTAAAACATAAGCAAGGCAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGCCTTGCTTATGTTTTAAACTGTGCAAACAACTCCATCAGGCACACAAGGAGGTCTCTGTATATTaGAGGTGCAGAAACTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLPCLCFKLCKQLHQAHKEVSVY*RCRNSG Trigger: TCCTGAGTTTCTGCACCTCCAATATACAGAGACCTC...CTTGTGTGCCTGATGGAGTTGTTTGCACAGTTTAAAACATAAGCAAGGCAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| 3UTR CAA 72 bp | AACAACTCCATCAGGCACACAAGACTTCAGACAGTTTaGAGCAAAGGGGCCCGAGAGATAAATATATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NNSIRHTRLQTV*SKGAREINIFH Trigger: GTGGAATATATTTATCTCTCGGGCCCCTTTGCTCAAAACTGTCTGAAGTCTTGTGTGCCTGATGGAGTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCAAAGAGGAAGGAGATTATGATGTTGAGAACCTGTGAAGTCCCTTCTTTCATCCCATGTAAACCCTaGATTTCACAAGAGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPKRKEIMMLRTCEVPSFIPCKP*ISQELF Trigger: GAACAACTCTTGTGAAATCCAGGGTTTACATGGGAT...GAAAGAAGGGACTTCACAGGTTCTCAACATCATAATCTCCTTCCTCTTTGGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS CCA 90 bp | CTTCCGGAGGGTTCGTGGAGTCCGTCCCCTGCGCCGGGTCCAAGGTaGCAAACACCAAAGCCAGGGTCACAAACTGGCCCAGCCGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPEGSWSPSPAPGPR*QTPKPGSQTGPAAP Trigger: CGGAGCGGCTGGGCCAGTTTGTGACCCTGGCTTTGGTGTTTGCCACCTTGGACCCGGCGCAGGGGACGGACTCCACGAACCCTCCGGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS CCA 90 bp | GTGTTCTGCAGGGACAGACGGCCTTTCTGCTGCGAGCTCCTGTCTTaGGGACCTTCCGGAGGGTTCGTGGAGTCCGTCCCCTGCGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VFCRDRRPFCCELLS*GPSGGFVESVPCAG Trigger: CCCGGCGCAGGGGACGGACTCCACGAACCCTCCGGAAGGTCCCCAAGACAGGAGCTCGCAGCAGAAAGGCCGTCTGTCCCTGCAGAACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS GCA 90 bp | CTCCTGTCTTGGGGACCTTCCGGAGGGTTCGTGGAGTCCGTCCCCTaGGCCGGGTCCAAGGTGGCAAACACCAAAGCCAGGGTCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSWGPSGGFVESVP*AGSKVANTKARVTN Trigger: GTTTGTGACCCTGGCTTTGGTGTTTGCCACCTTGGACCCGGCGCAGGGGACGGACTCCACGAACCCTCCGGAAGGTCCCCAAGACAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS GCA 90 bp | ACTCACTGCTTCCAGAGGGTCCCTGAGCGCTCTGGCCACCGGTTCTaGCTCGAGCATGGGCATTCGGGTGGCTTTTGCTCCCTCGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: THCFQRVPERSGHRF*LEHGHSGGFCSLAH Trigger: GTGAGCGAGGGAGCAAAAGCCACCCGAATGCCCATGCTCGAGGCAGAACCGGTGGCCAGAGCGCTCAGGGACCCTCTGGAAGCAGTGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS CCA 90 bp | CTTTCTGCTGCGAGCTCCTGTCTTGGGGACCTTCCGGAGGGTTCGTaGAGTCCGTCCCCTGCGCCGGGTCCAAGGTGGCAAACACCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSAASSCLGDLPEGS*SPSPAPGPRWQTPK Trigger: CTTTGGTGTTTGCCACCTTGGACCCGGCGCAGGGGACGGACTCCACGAACCCTCCGGAAGGTCCCCAAGACAGGAGCTCGCAGCAGAAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS GCA 90 bp | TGCTGGATCTCCGCTGTGTTCTGCAGGGACAGACGGCCTTTCTGCTaGGAGCTCCTGTCTTGGGGACCTTCCGGAGGGTTCGTGGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CWISAVFCRDRRPFC*ELLSWGPSGGFVES Trigger: GGACTCCACGAACCCTCCGGAAGGTCCCCAAGACAGGAGCTCGCAGCAGAAAGGCCGTCTGTCCCTGCAGAACACAGCGGAGATCCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS GCA 90 bp | CAGTGCTGGATCTCCGCTGTGTTCTGCAGGGACAGACGGCCTTTCTaGTGCGAGCTCCTGTCTTGGGGACCTTCCGGAGGGTTCGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QCWISAVFCRDRRPF*CELLSWGPSGGFVE Trigger: CTCCACGAACCCTCCGGAAGGTCCCCAAGACAGGAGCTCGCAGCAGAAAGGCCGTCTGTCCCTGCAGAACACAGCGGAGATCCAGCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS TCA 90 bp | TACTCAGACTGTTCATCCTCCCACTCACTGCTTCCAGAGGGTCCCTaGGCGCTCTGGCCACCGGTTCTGCCTCGAGCATGGGCATTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: YSDCSSSHSLLPEGP*ALWPPVLPRAWAFG Trigger: CCCGAATGCCCATGCTCGAGGCAGAACCGGTGGCCAGAGCGCTCAGGGACCCTCTGGAAGCAGTGAGTGGGAGGATGAACAGTCTGAGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS GCA 90 bp | CCTGGAGAGCTGAGCCCTGTCTGCCAGGGGCTGATGCTCTGGGGCTaGCGTGGGAGGTCTCTGTATATTGGAGGTGCAGAAACTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PGELSPVCQGLMLWG*RGRSLYIGGAETQD Trigger: ATCCTGAGTTTCTGCACCTCCAATATACAGAGACCTCCCACGGCAGCCCCAGAGCATCAGCCCCTGGCAGACAGGGCTCAGCTCTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS GCA 90 bp | ACCTCCGGATGTCGGAATACTCAGACTGTTCATCCTCCCACTCACTaGTTCCAGAGGGTCCCTGAGCGCTCTGGCCACCGGTTCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSGCRNTQTVHPPTH*FQRVPERSGHRFCL Trigger: GAGGCAGAACCGGTGGCCAGAGCGCTCAGGGACCCTCTGGAAGCAGTGAGTGGGAGGATGAACAGTCTGAGTATTCCGACATCCGGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CAA 90 bp | TGTCTCCATGTTGTTTCAGAGATGCCACAGGTGGGATTGGAGATCCAGCATGTGCGCAGGGCATGGGCCTaGCACCTCAGGGCATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLHVVSEMPQVGLEIQHVRRAWA*HLRASL Trigger: CAAGGATGCCCTGAGGTGCAAGGCCCATGCCCTGCG...CACATGCTGGATCTCCAATCCCACCTGTGGCATCTCTGAAACAACATGGAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS TCA 90 bp | TGTTCTCGAAACACTCAAACACACCACAGCCCACGTCCCCGGCATTaGCCAAACAGTGCTGGATCTCCGCTGTGTTCTGCAGGGACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CSRNTQTHHSPRPRH*PNSAGSPLCSAGTD Trigger: GTCTGTCCCTGCAGAACACAGCGGAGATCCAGCACTGTTTGGTCAATGCCGGGGACGTGGGCTGTGGTGTGTTTGAGTGTTTCGAGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCCTGCTCTGTGCAGACAGTACTGGGAACTGTGGGGGAGGGTTTACCACTCGAATTTTCCAGCGTaGTGCAGAAACGTCATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PAPALCRQYWELWGRVYHSNFPA*CRNVMQ Trigger: TTGCATGACGTTTCTGCACAACGCTGGAAAATTCGA...GTGGTAAACCCTCCCCCACAGTTCCCAGTACTGTCTGCACAGAGCAGGGGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS TCA 90 bp | ATGACGCAGGGCATGGGCCTTGCACCTCAGGGCATCCTTGATGAATaGCTTTCCCTGGGCATCGAATTTTCCAGCGTTGTGCAGAAACGT | + |
|
Preference number: 5 (lower is better) Translates to: MTQGMGLAPQGILDE*LSLGIEFSSVVQKR Trigger: ACGTTTCTGCACAACGCTGGAAAATTCGATGCCCAGGGAAAGTCATTCATCAAGGATGCCCTGAGGTGCAAGGCCCATGCCCTGCGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS TCA 90 bp | GCAGGTTCACAAGGTCCACATAGGGCTCATGCAGCAGGAGATCCTTaGAATGAATCATCTCCACAATCACACCGACGTTCTCCTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGSQGPHRAHAAGDP*NESSPQSHRRSPGL Trigger: CAGCCCAGGAGAACGTCGGTGTGATTGTGGAGATGATTCATTTCAAGGATCTCCTGCTGCATGAGCCCTATGTGGACCTTGTGAACCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTGCCTTGCTTATGTTTTAAACTGTGCAAACAACTCCATCAGGCACACAAGCTGCGAGCTCCTGTCTaGGGGACCTTCCGGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WLPCLCFKLCKQLHQAHKLRAPV*GTFRRV Trigger: AACCCTCCGGAAGGTCCCCAAGACAGGAGCTCGCAG...CTTGTGTGCCTGATGGAGTTGTTTGCACAGTTTAAAACATAAGCAAGGCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CAA 90 bp | CTAACACTGGCTGCCAAAAGACTGTGTCAGCCAAAGAGGAAGGAGATTATGATGGCATTCGGGTGGCTTTaGCTCCCTCGCTCACCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTLAAKRLCQPKRKEIMMAFGWL*LPRSPL Trigger: CAAGGGTGAGCGAGGGAGCAAAAGCCACCCGAATGC...CATCATAATCTCCTTCCTCTTTGGCTGACACAGTCTTTTGGCAGCCAGTGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS GCA 90 bp | CTTGAAATGAATCATCTCCACAATCACACCGACGTTCTCCTGGGCTaGGGAGCACAGGTCATGCTTCAGATAGCATTCCCTCTGCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: LEMNHLHNHTDVLLG*GAQVMLQIAFPLQL Trigger: CAGTTGCAGAGGGAATGCTATCTGAAGCATGACCTGTGCTCCGCAGCCCAGGAGAACGTCGGTGTGATTGTGGAGATGATTCATTTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CAA 90 bp | GCCGAATTGAAACTCCCTAATTACTATTTGGCCCTTCGTAGAAAAAGTTGGCCGCCCACGTCCCCGGCATaGACCAAACAGTGCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: AELKLPNYYLALRRKSWPPTSPA*TKQCWI Trigger: GATCCAGCACTGTTTGGTCAATGCCGGGGACGTGGG...CGGCCAACTTTTTCTACGAAGGGCCAAATAGTAATTAGGGAGTTTCAATTCGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS-3UTR CAA 90 bp | TTGGCCCTTCGTAGAAAAAGTTGGCCGAGCCTTGCTCTGGAGACCTGGCCCAGGTGGATTTCACAAGAGTaGTTCTCGAAACACTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LALRRKSWPSLALETWPRWISQE*FSKHSN Trigger: GTTTGAGTGTTTCGAGAACAACTCTTGTGAAATCCA...CCTGGGCCAGGTCTCCAGAGCAAGGCTCGGCCAACTTTTTCTACGAAGGGCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
||
| CDS TCA 90 bp | ATTTCCCTAATTGCTGGACACTTCCTGCTGATGCAGCCAAATTTATaGCGCAGGGCATGGGCCTTGCACCTCAGGGCATCCTTGATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ISLIAGHFLLMQPNL*RRAWALHLRASLMN Trigger: ATTCATCAAGGATGCCCTGAGGTGCAAGGCCCATGCCCTGCGTCATAAATTTGGCTGCATCAGCAGGAAGTGTCCAGCAATTAGGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS-3UTR CAA 90 bp | GGGTTGGTTTGGTTTTCTTCCTTCTCTAACCTGGTTTTTGTGACCCAGTTGTTTCTCCCTCGCTCACCCTaGGCACCTCTGTTGGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: GLVWFSSFSNLVFVTQLFLPRSP*APLLAV Trigger: AACAGCCAACAGAGGTGCCAAGGGTGAGCGAGGGAG...AAACAACTGGGTCACAAAAACCAGGTTAGAGAAGGAAGAAAACCAAACCAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS GCA 90 bp | CTTCAGATAGCATTCCCTCTGCAACTGGAAAACCATTTCCCTAATTaGTGGACACTTCCTGCTGATGCAGCCAAATTTATGACGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: LQIAFPLQLENHFPN*WTLPADAAKFMTQG Trigger: GCCCTGCGTCATAAATTTGGCTGCATCAGCAGGAAGTGTCCAGCAATTAGGGAAATGGTTTTCCAGTTGCAGAGGGAATGCTATCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CCA 90 bp | CAGATAGCATTCCCTCTGCAACTGGAAAACCATTTCCCTAATTGCTaGACACTTCCTGCTGATGCAGCCAAATTTATGACGCAGGGCATG | + |
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Preference number: 5 (lower is better) Translates to: QIAFPLQLENHFPNC*TLPADAAKFMTQGM Trigger: CATGCCCTGCGTCATAAATTTGGCTGCATCAGCAGGAAGTGTCCAGCAATTAGGGAAATGGTTTTCCAGTTGCAGAGGGAATGCTATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS GCA 90 bp | TCCTTGATGAATGACTTTCCCTGGGCATCGAATTTTCCAGCGTTGTaGAGAAACGTCATGCAAATCCCATGTAAACCCTGGATTTCACAA | + |
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Preference number: 5 (lower is better) Translates to: SLMNDFPWASNFPAL*RNVMQIPCKPWISQ Trigger: TTGTGAAATCCAGGGTTTACATGGGATTTGCATGACGTTTCTGCACAACGCTGGAAAATTCGATGCCCAGGGAAAGTCATTCATCAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CCA 90 bp | TTTCCAGCGTTGTGCAGAAACGTCATGCAAATCCCATGTAAACCCTaGATTTCACAAGAGTTGTTCTCGAAACACTCAAACACACCACAG | + |
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Preference number: 5 (lower is better) Translates to: FPALCRNVMQIPCKP*ISQELFSKHSNTPQ Trigger: CTGTGGTGTGTTTGAGTGTTTCGAGAACAACTCTTGTGAAATCCAGGGTTTACATGGGATTTGCATGACGTTTCTGCACAACGCTGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CCA 72 bp | GCGAGCTCCTGTCTTGGGGACCTTCCGGAGGGTTCGTaGAGTCCGTCCCCTGCGCCGGGTCCAAGGTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: ASSCLGDLPEGS*SPSPAPGPRWQ Trigger: TTGCCACCTTGGACCCGGCGCAGGGGACGGACTCCACGAACCCTCCGGAAGGTCCCCAAGACAGGAGCTCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CAA 90 bp | TGTGTTCTGCAGGGACAGACGGCCTTTCTGCTGCGAGCTCCTGTCTaGGGGACCTTCCGGAGGGTTCGTGGAGTCCGTCCCCTGCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: CVLQGQTAFLLRAPV*GTFRRVRGVRPLRR Trigger: CCGGCGCAGGGGACGGACTCCACGAACCCTCCGGAAGGTCCCCAAGACAGGAGCTCGCAGCAGAAAGGCCGTCTGTCCCTGCAGAACACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CCA 72 bp | AGGGACAGACGGCCTTTCTGCTGCGAGCTCCTGTCTTaGGGACCTTCCGGAGGGTTCGTGGAGTCCGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: RDRRPFCCELLS*GPSGGFVESVP Trigger: GGGGACGGACTCCACGAACCCTCCGGAAGGTCCCCAAGACAGGAGCTCGCAGCAGAAAGGCCGTCTGTCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CAA 72 bp | CAGGGACAGACGGCCTTTCTGCTGCGAGCTCCTGTCTaGGGGACCTTCCGGAGGGTTCGTGGAGTCCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: QGQTAFLLRAPV*GTFRRVRGVRP Trigger: GGGACGGACTCCACGAACCCTCCGGAAGGTCCCCAAGACAGGAGCTCGCAGCAGAAAGGCCGTCTGTCCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS GCA 72 bp | TTCCAGAGGGTCCCTGAGCGCTCTGGCCACCGGTTCTaGCTCGAGCATGGGCATTCGGGTGGCTTTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FQRVPERSGHRF*LEHGHSGGFCS Trigger: GGAGCAAAAGCCACCCGAATGCCCATGCTCGAGGCAGAACCGGTGGCCAGAGCGCTCAGGGACCCTCTGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CCA 72 bp | TGGCCACCGGTTCTGCCTCGAGCATGGGCATTCGGGTaGCTTTTGCTCCCTCGCTCACCCTTGGCACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: WPPVLPRAWAFG*LLLPRSPLAPL Trigger: CAGAGGTGCCAAGGGTGAGCGAGGGAGCAAAAGCCACCCGAATGCCCATGCTCGAGGCAGAACCGGTGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS GCA 72 bp | TCCGCTGTGTTCTGCAGGGACAGACGGCCTTTCTGCTaGGAGCTCCTGTCTTGGGGACCTTCCGGAGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SAVFCRDRRPFC*ELLSWGPSGGF Trigger: GAACCCTCCGGAAGGTCCCCAAGACAGGAGCTCGCAGCAGAAAGGCCGTCTGTCCCTGCAGAACACAGCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS GCA 72 bp | ATCTCCGCTGTGTTCTGCAGGGACAGACGGCCTTTCTaGTGCGAGCTCCTGTCTTGGGGACCTTCCGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: ISAVFCRDRRPF*CELLSWGPSGG Trigger: CCCTCCGGAAGGTCCCCAAGACAGGAGCTCGCAGCAGAAAGGCCGTCTGTCCCTGCAGAACACAGCGGAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CCA 72 bp | CCACAGCCCACGTCCCCGGCATTGACCAAACAGTGCTaGATCTCCGCTGTGTTCTGCAGGGACAGACGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PQPTSPALTKQC*ISAVFCRDRRP Trigger: AGGCCGTCTGTCCCTGCAGAACACAGCGGAGATCCAGCACTGTTTGGTCAATGCCGGGGACGTGGGCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CAA 72 bp | CCGGTTCTGCCTCGAGCATGGGCATTCGGGTGGCTTTaGCTCCCTCGCTCACCCTTGGCACCTCTGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PVLPRAWAFGWL*LPRSPLAPLLA Trigger: AGCCAACAGAGGTGCCAAGGGTGAGCGAGGGAGCAAAAGCCACCCGAATGCCCATGCTCGAGGCAGAACCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS GCA 72 bp | ACACCACAGCCCACGTCCCCGGCATTGACCAAACAGTaGTGGATCTCCGCTGTGTTCTGCAGGGACAGACGG | + |
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Preference number: 6 (lower is better) Translates to: TPQPTSPALTKQ*WISAVFCRDRR Trigger: CCGTCTGTCCCTGCAGAACACAGCGGAGATCCAGCACTGTTTGGTCAATGCCGGGGACGTGGGCTGTGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS GCA 72 bp | CTGAGCCCTGTCTGCCAGGGGCTGATGCTCTGGGGCTaGCGTGGGAGGTCTCTGTATATTGGAGGTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LSPVCQGLMLWG*RGRSLYIGGAE Trigger: TTCTGCACCTCCAATATACAGAGACCTCCCACGGCAGCCCCAGAGCATCAGCCCCTGGCAGACAGGGCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS TCA 72 bp | AACACTCAAACACACCACAGCCCACGTCCCCGGCATTaGCCAAACAGTGCTGGATCTCCGCTGTGTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: NTQTHHSPRPRH*PNSAGSPLCSA Trigger: TGCAGAACACAGCGGAGATCCAGCACTGTTTGGTCAATGCCGGGGACGTGGGCTGTGGTGTGTTTGAGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS TCA 72 bp | ATTGCTGGACACTTCCTGCTGATGCAGCCAAATTTATaGCGCAGGGCATGGGCCTTGCACCTCAGGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: IAGHFLLMQPNL*RRAWALHLRAS Trigger: GGATGCCCTGAGGTGCAAGGCCCATGCCCTGCGTCATAAATTTGGCTGCATCAGCAGGAAGTGTCCAGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CAA 72 bp | AAACACTCAAACACACCACAGCCCACGTCCCCGGCATaGACCAAACAGTGCTGGATCTCCGCTGTGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KHSNTPQPTSPA*TKQCWISAVFC Trigger: GCAGAACACAGCGGAGATCCAGCACTGTTTGGTCAATGCCGGGGACGTGGGCTGTGGTGTGTTTGAGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CAA 90 bp | TTGTTCTCGAAACACTCAAACACACCACAGCCCACGTCCCCGGCATaGACCAAACAGTGCTGGATCTCCGCTGTGTTCTGCAGGGACAGA | + |
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Preference number: 6 (lower is better) Translates to: LFSKHSNTPQPTSPA*TKQCWISAVFCRDR Trigger: TCTGTCCCTGCAGAACACAGCGGAGATCCAGCACTGTTTGGTCAATGCCGGGGACGTGGGCTGTGGTGTGTTTGAGTGTTTCGAGAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS TCA 72 bp | GGCATGGGCCTTGCACCTCAGGGCATCCTTGATGAATaGCTTTCCCTGGGCATCGAATTTTCCAGCGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GMGLAPQGILDE*LSLGIEFSSVV Trigger: CACAACGCTGGAAAATTCGATGCCCAGGGAAAGTCATTCATCAAGGATGCCCTGAGGTGCAAGGCCCATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS GCA 72 bp | AATCATCTCCACAATCACACCGACGTTCTCCTGGGCTaGGGAGCACAGGTCATGCTTCAGATAGCATTCCCT | + |
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Preference number: 6 (lower is better) Translates to: NHLHNHTDVLLG*GAQVMLQIAFP Trigger: AGGGAATGCTATCTGAAGCATGACCTGTGCTCCGCAGCCCAGGAGAACGTCGGTGTGATTGTGGAGATGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CAA 90 bp | AGAAACGTCATGCAAATCCCATGTAAACCCTGGATTTCACAAGAGTaGTTCTCGAAACACTCAAACACACCACAGCCCACGTCCCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: RNVMQIPCKPWISQE*FSKHSNTPQPTSPA Trigger: TGCCGGGGACGTGGGCTGTGGTGTGTTTGAGTGTTTCGAGAACAACTCTTGTGAAATCCAGGGTTTACATGGGATTTGCATGACGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS TCA 72 bp | CAAGGTCCACATAGGGCTCATGCAGCAGGAGATCCTTaGAATGAATCATCTCCACAATCACACCGACGTTCT | + |
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Preference number: 6 (lower is better) Translates to: QGPHRAHAAGDP*NESSPQSHRRS Trigger: AGAACGTCGGTGTGATTGTGGAGATGATTCATTTCAAGGATCTCCTGCTGCATGAGCCCTATGTGGACCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CAA 90 bp | GCATCCTTGATGAATGACTTTCCCTGGGCATCGAATTTTCCAGCGTaGTGCAGAAACGTCATGCAAATCCCATGTAAACCCTGGATTTCA | + |
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Preference number: 6 (lower is better) Translates to: ASLMNDFPWASNFPA*CRNVMQIPCKPWIS Trigger: TGAAATCCAGGGTTTACATGGGATTTGCATGACGTTTCTGCACAACGCTGGAAAATTCGATGCCCAGGGAAAGTCATTCATCAAGGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CCA 72 bp | TTCCCTCTGCAACTGGAAAACCATTTCCCTAATTGCTaGACACTTCCTGCTGATGCAGCCAAATTTATGACG | + |
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Preference number: 6 (lower is better) Translates to: FPLQLENHFPNC*TLPADAAKFMT Trigger: CGTCATAAATTTGGCTGCATCAGCAGGAAGTGTCCAGCAATTAGGGAAATGGTTTTCCAGTTGCAGAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CAA 72 bp | ATGCAAATCCCATGTAAACCCTGGATTTCACAAGAGTaGTTCTCGAAACACTCAAACACACCACAGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: MQIPCKPWISQE*FSKHSNTPQPT Trigger: CGTGGGCTGTGGTGTGTTTGAGTGTTTCGAGAACAACTCTTGTGAAATCCAGGGTTTACATGGGATTTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CAA 72 bp | ATGAATGACTTTCCCTGGGCATCGAATTTTCCAGCGTaGTGCAGAAACGTCATGCAAATCCCATGTAAACCC | + |
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Preference number: 6 (lower is better) Translates to: MNDFPWASNFPA*CRNVMQIPCKP Trigger: GGGTTTACATGGGATTTGCATGACGTTTCTGCACAACGCTGGAAAATTCGATGCCCAGGGAAAGTCATTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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| CDS CCA 72 bp | TTGTGCAGAAACGTCATGCAAATCCCATGTAAACCCTaGATTTCACAAGAGTTGTTCTCGAAACACTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: LCRNVMQIPCKP*ISQELFSKHSN Trigger: GTTTGAGTGTTTCGAGAACAACTCTTGTGAAATCCAGGGTTTACATGGGATTTGCATGACGTTTCTGCACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020546.3 |
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