Pregenerated sensors for STC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014813Ensembl transcript IDs: ENSMUST00000014957.10
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCACTCCATCATTTACCAGAGTGCCAGGCACTGATGGAAGGCGATaGGCCAAGAACTGCCACTTCCAAGGGGATAGTAGGCCTTGTCAC | + |
|
Preference number: 1 (lower is better) Translates to: PTPSFTRVPGTDGRR*AKNCHFQGDSRPCH Trigger: GTGACAAGGCCTACTATCCCCTTGGAAGTGGCAGTTCTTGGCTCATCGCCTTCCATCAGTGCCTGGCACTCTGGTAAATGATGGAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR TCA 90 bp | TTTGGAGCAGCCCCTCCCTCTTCCTCTCTCAGCATTGACCTTTGGTaGGCAGTGACACTCATAATTGGGGCTGTTGGGTTCAAGGACAAT | + |
|
Preference number: 1 (lower is better) Translates to: FGAAPPSSSLSIDLW*AVTLIIGAVGFKDN Trigger: ATTGTCCTTGAACCCAACAGCCCCAATTATGAGTGTCACTGCTCACCAAAGGTCAATGCTGAGAGAGGAAGAGGGAGGGGCTGCTCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR GCA 90 bp | AGAGGAGATCATGCAAACAGGTCTAGGTCAGTCCCCGAATCGCTCTaGAGCAAACACGAGACAAAGCTTTGGAAGTTCAAGAAGGAGGTG | + |
|
Preference number: 1 (lower is better) Translates to: RGDHANRSRSVPESL*SKHETKLWKFKKEV Trigger: CACCTCCTTCTTGAACTTCCAAAGCTTTGTCTCGTGTTTGCTGCAGAGCGATTCGGGGACTGACCTAGACCTGTTTGCATGATCTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR TCA 90 bp | GGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGGTCTTTTTaGTTCTTGTTATTCCCAGTTGGATGTGACAGAGCTGTTTCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: GLVTPSGPSPKGWSF*FLLFPVGCDRAVSG Trigger: TCCTGAAACAGCTCTGTCACATCCAACTGGGAATAACAAGAATCAAAAAGACCATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR TCA 90 bp | TATGTTACTGGTTTTAAAGGCTTTGTGGTAAAGTTGTATTGCTTTTaGTTTCCCTGGAGAGGTGCCCTCCCTCCTCCCACCAGGGTCCCT | + |
|
Preference number: 1 (lower is better) Translates to: YVTGFKGFVVKLYCF*FPWRGALPPPTRVP Trigger: AGGGACCCTGGTGGGAGGAGGGAGGGCACCTCTCCAGGGAAATCAAAAGCAATACAACTTTACCACAAAGCCTTTAAAACCAGTAACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 90 bp | AAGAACTGCCACTTCCAAGGGGATAGTAGGCCTTGTCACACCAAGTaGTCCAAGCCCAAAGGGATGGTCTTTTTGATTCTTGTTATTCCC | + |
|
Preference number: 1 (lower is better) Translates to: KNCHFQGDSRPCHTK*SKPKGMVFLILVIP Trigger: GGGAATAACAAGAATCAAAAAGACCATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGAAGTGGCAGTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR GCA 90 bp | AGCTATTTGCCACTTTGGGCTTCTGGCTTAGTGGGTTTGCAACAATaGACAACACACACACACTTGACTAGCTTTTCTGGTTCAAAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: SYLPLWASGLVGLQQ*TTHTHLTSFSGSKK Trigger: CTTCTTTGAACCAGAAAAGCTAGTCAAGTGTGTGTGTGTTGTGCATTGTTGCAAACCCACTAAGCCAGAAGCCCAAAGTGGCAAATAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 90 bp | CCTGAGAAACTACTGTTGTTCGTAGACAGGTTAATCATTTGGCTTTaGTGGCTACCATCCTGTAAACATCACAGCAGAAATGATCAAACC | + |
|
Preference number: 1 (lower is better) Translates to: PEKLLLFVDRLIIWL*WLPSCKHHSRNDQT Trigger: GGTTTGATCATTTCTGCTGTGATGTTTACAGGATGGTAGCCACCAAAGCCAAATGATTAACCTGTCTACGAACAACAGTAGTTTCTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 90 bp | AATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTaGCTTAGTGGGTTTGCAACAATGCACAACACACACACACTTGAC | + |
|
Preference number: 1 (lower is better) Translates to: NCTRNSHKLFATLGF*LSGFATMHNTHTLD Trigger: GTCAAGTGTGTGTGTGTTGTGCATTGTTGCAAACCCACTAAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 90 bp | AATGACCCTGAGAAACTACTGTTGTTCGTAGACAGGTTAATCATTTaGCTTTGGTGGCTACCATCCTGTAAACATCACAGCAGAAATGAT | + |
|
Preference number: 1 (lower is better) Translates to: NDPEKLLLFVDRLII*LWWLPSCKHHSRND Trigger: ATCATTTCTGCTGTGATGTTTACAGGATGGTAGCCACCAAAGCCAAATGATTAACCTGTCTACGAACAACAGTAGTTTCTCAGGGTCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR TCA 90 bp | CTACCAGGTGACCATTCTAAAGGGATCTACATTTTCAGATTACAATaGCTGGGTAGTTACATGAATGGTTTGTGTTTGCGGAGAGTAGAT | + |
|
Preference number: 1 (lower is better) Translates to: LPGDHSKGIYIFRLQ*LGSYMNGLCLRRVD Trigger: ATCTACTCTCCGCAAACACAAACCATTCATGTAACTACCCAGTCATTGTAATCTGAAAATGTAGATCCCTTTAGAATGGTCACCTGGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 90 bp | CCACACATGTATTCTGTTGGTAAGAATGCTGTCATTGCAGAATGTTaGGATATTGATTATGGAAGCCTAGTTTCATGCAATTTTTCTTTA | + |
|
Preference number: 1 (lower is better) Translates to: PHMYSVGKNAVIAEC*DIDYGSLVSCNFSL Trigger: TAAAGAAAAATTGCATGAAACTAGGCTTCCATAATCAATATCCCAACATTCTGCAATGACAGCATTCTTACCAACAGAATACATGTGTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAGGGGATAGTAGGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGGGCCTCCGGGTTGAGGTaGGCTGGGAGATTAACGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SKGIVGLVTPSGPSPKGWASGLR*AGRLTS Trigger: AGACGTTAATCTCCCAGCCCACCTCAACCCGGAGGC...CCATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 90 bp | ACAGAGCTGTTTCAGGATACATCTAAGTCAAACGTAGCCTCCGGGTaGAGGTGGGCTGGGAGATTAACGTCTTACCTGGGGTCCTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: TELFQDTSKSNVASG*RWAGRLTSYLGSFR Trigger: TCTGAAGGACCCCAGGTAAGACGTTAATCTCCCAGCCCACCTCAACCCGGAGGCTACGTTTGACTTAGATGTATCCTGAAACAGCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR GCA 90 bp | GAGAATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTCCTTGGGGCCGCTGCTaGAGCTGCAGCTGCTACGCT | + |
|
Preference number: 2 (lower is better) Translates to: ENCTRNSHKLFATLGFWLPWGRC*SCSCYA Trigger: AGCGTAGCAGCTGCAGCTGCAGCAGCGGCCCCAAGG...AAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR GCA 90 bp | TACATAGAGGTTGAAGGACAGCCTTGTGGAGTCTGTTCTTCTTTTCTACCTTTACAGCCTTGGGGCCGCTaGTGCAGCTGCAGCTGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: YIEVEGQPCGVCSSFLPLQPWGR*CSCSCY Trigger: GTAGCAGCTGCAGCTGCAGCAGCGGCCCCAAGGCTG...TAAAGGTAGAAAAGAAGAACAGACTCCACAAGGCTGTCCTTCAACCTCTATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR GCA 90 bp | TACATAGAGGTTGAAGGACAGCCTTGTGGAGTCTGTTCTTCTTTTCTACCTTTATGTGGGGACAGAGGCTaGAGCCTTGGGGCCGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: YIEVEGQPCGVCSSFLPLCGDRG*SLGAAA Trigger: AGCAGCGGCCCCAAGGCTGCAGCCTCTGTCCCCACA...TAAAGGTAGAAAAGAAGAACAGACTCCACAAGGCTGTCCTTCAACCTCTATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 90 bp | GCTTCTGGCTTAGTGGGTTTGCAACAATGCACAACACACACACACTaGACTAGCTTTTCTGGTTCAAAGAAGTCAGCCTTGCCTGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ASGLVGLQQCTTHTH*TSFSGSKKSALPGV Trigger: CACCCCAGGCAAGGCTGACTTCTTTGAACCAGAAAAGCTAGTCAAGTGTGTGTGTGTTGTGCATTGTTGCAAACCCACTAAGCCAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAAGGGGATAGTAGGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGGTGGATATCTGGAAGTaGGATAGTTATTCCATTCCC | + |
|
Preference number: 2 (lower is better) Translates to: FQGDSRPCHTKWSKPKGMVDIWK*DSYSIP Trigger: GGGAATGGAATAACTATCTCACTTCCAGATATCCAC...CATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CCA 90 bp | GAGAATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTGAAGTCAGCCTTGCCTaGGGTGGGAAGTTGGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ENCTRNSHKLFATLGFWLEVSLA*GGKLGV Trigger: CACCCCCAACTTCCCACCCCAGGCAAGGCTGACTTC...AAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR TCA 90 bp | TCCAAGGGGATAGTAGGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGGAGAATGTTGGGATATTaGTTATGGAAGCCTAGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SKGIVGLVTPSGPSPKGWRMLGY*LWKPSF Trigger: GAAACTAGGCTTCCATAATCAATATCCCAACATTCT...CCATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR TCA 90 bp | CATCACAGCAGAAATGATCAAACCACCAGCGCTTATGCCCTCCTTCATTCTCTCAGGCCACAAGGAGCATaGATGTGGATATCTGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: HHSRNDQTTSAYALLHSLRPQGA*MWISGS Trigger: ACTTCCAGATATCCACATTCATGCTCCTTGTGGCCT...GAGAGAATGAAGGAGGGCATAAGCGCTGGTGGTTTGATCATTTCTGCTGTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAGGGGATAGTAGGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGGAAAGTTGTTTTGTATTaGCTAACTCTACCAGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SKGIVGLVTPSGPSPKGWKVVLY*LTLPGD Trigger: GTCACCTGGTAGAGTTAGCCAATACAAAACAACTTT...CCATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 90 bp | ATTGGGGCTGTTGGGTTCAAGGACAATGACCCTGAGAAACTACTGTaGTTCGTAGACAGGTTAATCATTTGGCTTTGGTGGCTACCATCC | + |
|
Preference number: 2 (lower is better) Translates to: IGAVGFKDNDPEKLL*FVDRLIIWLWWLPS Trigger: GGATGGTAGCCACCAAAGCCAAATGATTAACCTGTCTACGAACAACAGTAGTTTCTCAGGGTCATTGTCCTTGAACCCAACAGCCCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR GCA 90 bp | GAGAATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTCAAAGAAGTCAGCCTTaGCTGGGGTGGGAAGTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: ENCTRNSHKLFATLGFWLQRSQP*LGWEVG Trigger: CCCAACTTCCCACCCCAGGCAAGGCTGACTTCTTTG...AAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR GCA 90 bp | TACATAGAGGTTGAAGGACAGCCTTGTGGAGTCTGTTCTTCTTTTCTACCTTTACATCATTTACCAGAGTaGCAGGCACTGATGGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: YIEVEGQPCGVCSSFLPLHHLPE*QALMEG Trigger: GCCTTCCATCAGTGCCTGGCACTCTGGTAAATGATG...TAAAGGTAGAAAAGAAGAACAGACTCCACAAGGCTGTCCTTCAACCTCTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 90 bp | ATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTAGTGGGTTaGCAACAATGCACAACACACACACACTTGACTAGCTTTTCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: ILISYLPLWASGLVG*QQCTTHTHLTSFSG Trigger: ACCAGAAAAGCTAGTCAAGTGTGTGTGTGTTGTGCATTGTTGCAAACCCACTAAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR TCA 90 bp | GAGAATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTGACCCAAAGGCTGATTaGCTCATTCCTGATTGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: ENCTRNSHKLFATLGFWLDPKAD*LIPDWL Trigger: AAGCCAATCAGGAATGAGTCAATCAGCCTTTGGGTC...AAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CCA 90 bp | CATCACAGCAGAAATGATCAAACCACCAGCGCTTATGCCCTCCTTCATTCTCTCCTTCAGATAACCTGTTaGGTTTTCCTGTCAAGTATA | + |
|
Preference number: 2 (lower is better) Translates to: HHSRNDQTTSAYALLHSLLQITC*VFLSSI Trigger: TATACTTGACAGGAAAACCCAACAGGTTATCTGAAG...GAGAGAATGAAGGAGGGCATAAGCGCTGGTGGTTTGATCATTTCTGCTGTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CCA 90 bp | ATAATACGGCACAAAAATGTTCTAAAGTGCAACCAAATCACAAGAGAGGAGATCCAGTGTCCATTTGTTTaGGACCTGGGGATGGGACAG | + |
|
Preference number: 2 (lower is better) Translates to: IIRHKNVLKCNQITREEIQCPFV*DLGMGQ Trigger: CTGTCCCATCCCCAGGTCCCAAACAAATGGACACTG...GATCTCCTCTCTTGTGATTTGGTTGCACTTTAGAACATTTTTGTGCCGTATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 90 bp | GTCCAAGCCCAAAGGGATGGTCTTTTTGATTCTTGTTATTCCCAGTaGGATGTGACAGAGCTGTTTCAGGATACATCTAAGTCAAACGTA | + |
|
Preference number: 2 (lower is better) Translates to: VQAQRDGLFDSCYSQ*DVTELFQDTSKSNV Trigger: TACGTTTGACTTAGATGTATCCTGAAACAGCTCTGTCACATCCAACTGGGAATAACAAGAATCAAAAAGACCATCCCTTTGGGCTTGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR TCA 90 bp | GAGAATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTGACTGGGTAGTTACATaGATGGTTTGTGTTTGCGGA | + |
|
Preference number: 2 (lower is better) Translates to: ENCTRNSHKLFATLGFWLDWVVT*MVCVCG Trigger: TCCGCAAACACAAACCATTCATGTAACTACCCAGTC...AAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGGCTGATTGACTCATTCCTGATTGGCTTAGTGGAACAATATCCCACTCCAATTCATATTCGTCCATaGCCAGCACAGATTCATAAC | + |
|
Preference number: 2 (lower is better) Translates to: QRLIDSFLIGLVEQYPTPIHIRP*PAQIHN Trigger: GTTATGAATCTGTGCTGGCCATGGACGAATATGAAT...TGGAGTGGGATATTGTTCCACTAAGCCAATCAGGAATGAGTCAATCAGCCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CCA 90 bp | GAGAATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTTTTGGGACCTGGGGATaGGACAGTTCTAAGTATGAA | + |
|
Preference number: 2 (lower is better) Translates to: ENCTRNSHKLFATLGFWLFGTWG*DSSKYE Trigger: TTCATACTTAGAACTGTCCCATCCCCAGGTCCCAAA...AAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CCA 90 bp | TACATAGAGGTTGAAGGACAGCCTTGTGGAGTCTGTTCTTCTTTTCTACCTTTAATACCAATGTCACTGTaGGGAGAAAGGAGGGTATAT | + |
|
Preference number: 2 (lower is better) Translates to: YIEVEGQPCGVCSSFLPLIPMSL*GERRVY Trigger: ATATACCCTCCTTTCTCCCCACAGTGACATTGGTAT...TAAAGGTAGAAAAGAAGAACAGACTCCACAAGGCTGTCCTTCAACCTCTATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 90 bp | ACATTCTCTCTTGAGGAGAGGCAGAATGACCACACATGTATTCTGTaGGTAAGAATGCTGTCATTGCAGAATGTTGGGATATTGATTATG | + |
|
Preference number: 2 (lower is better) Translates to: TFSLEERQNDHTCIL*VRMLSLQNVGILIM Trigger: CATAATCAATATCCCAACATTCTGCAATGACAGCATTCTTACCAACAGAATACATGTGTGGTCATTCTGCCTCTCCTCAAGAGAGAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CCA 90 bp | TACATAGAGGTTGAAGGACAGCCTTGTGGAGTCTGTTCTTCTTTTCTACCTTTAATCATTTGGCTTTGGTaGCTACCATCCTGTAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: YIEVEGQPCGVCSSFLPLIIWLW*LPSCKH Trigger: ATGTTTACAGGATGGTAGCCACCAAAGCCAAATGAT...TAAAGGTAGAAAAGAAGAACAGACTCCACAAGGCTGTCCTTCAACCTCTATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 90 bp | AGATGCAAGAAGATGCTAGCTCAAAGTCTGGTTGGAGAACCAGGTTaGAGCAATTTGGTAAATATGTCAGAAAGGAAATTAGACATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: RCKKMLAQSLVGEPG*SNLVNMSERKLDIG Trigger: TCCAATGTCTAATTTCCTTTCTGACATATTTACCAAATTGCTCAAACCTGGTTCTCCAACCAGACTTTGAGCTAGCATCTTCTTGCATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 90 bp | TTTACTGAACTTAAGAGAATTGTACTAGGAATTCTCATAAGCTATTaGCCACTTTGGGCTTCTGGCTTAGTGGGTTTGCAACAATGCACA | + |
|
Preference number: 2 (lower is better) Translates to: FTELKRIVLGILISY*PLWASGLVGLQQCT Trigger: TGTGCATTGTTGCAAACCCACTAAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTCTTAAGTTCAGTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR TCA 90 bp | ATAATACGGCACAAAAATGTTCTAAAGTGCAACCAAATCACAAGAGAGGAGATCAGCATTGACCTTTGGTaGGCAGTGACACTCATAATT | + |
|
Preference number: 2 (lower is better) Translates to: IIRHKNVLKCNQITREEISIDLW*AVTLII Trigger: AATTATGAGTGTCACTGCTCACCAAAGGTCAATGCT...GATCTCCTCTCTTGTGATTTGGTTGCACTTTAGAACATTTTTGTGCCGTATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CCA 90 bp | ATAATACGGCACAAAAATGTTCTAAAGTGCAACCAAATCACAAGAGAGGAGATCCAGTACACTCAAAGTTaGTGTGTCAACACCCCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: IIRHKNVLKCNQITREEIQYTQS*CVNTPK Trigger: TTTAGGGGTGTTGACACACCAACTTTGAGTGTACTG...GATCTCCTCTCTTGTGATTTGGTTGCACTTTAGAACATTTTTGTGCCGTATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR GCA 90 bp | TACATAGAGGTTGAAGGACAGCCTTGTGGAGTCTGTTCTTCTTTTCTACCTTTAAAAGTTATTATAGACTaGTCTGTTAAGCAGAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: YIEVEGQPCGVCSSFLPLKVIID*SVKQSP Trigger: AGGACTCTGCTTAACAGAGCAGTCTATAATAACTTT...TAAAGGTAGAAAAGAAGAACAGACTCCACAAGGCTGTCCTTCAACCTCTATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CCA 90 bp | ATAATACGGCACAAAAATGTTCTAAAGTGCAACCAAATCACAAGAGAGGAGATCGTCATTGCAGAATGTTaGGATATTGATTATGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: IIRHKNVLKCNQITREEIVIAEC*DIDYGS Trigger: GCTTCCATAATCAATATCCCAACATTCTGCAATGAC...GATCTCCTCTCTTGTGATTTGGTTGCACTTTAGAACATTTTTGTGCCGTATTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 72 bp | CTTAACAATCTGATGTCAGCGCGCTTCGAGGCTGTGTaGGGACAGAGGCTGCAGCCTTGGGGCCGCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LNNLMSARFEAV*GQRLQPWGRCC Trigger: GCAGCAGCGGCCCCAAGGCTGCAGCCTCTGTCCCCACACAGCCTCGAAGCGCGCTGACATCAGATTGTTAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR TCA 72 bp | GTTTGGAGCAGCCCCTCCCTCTTCCTCTCTCAGCATTaGCCTTTGGTGAGCAGTGACACTCATAATTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: VWSSPSLFLSQH*PLVSSDTHNWG Trigger: GCCCCAATTATGAGTGTCACTGCTCACCAAAGGTCAATGCTGAGAGAGGAAGAGGGAGGGGCTGCTCCAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR TCA 72 bp | TCATTTACCAGAGTGCCAGGCACTGATGGAAGGCGATaGGCCAAGAACTGCCACTTCCAAGGGGATAGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SFTRVPGTDGRR*AKNCHFQGDSR Trigger: CCTACTATCCCCTTGGAAGTGGCAGTTCTTGGCTCATCGCCTTCCATCAGTGCCTGGCACTCTGGTAAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 72 bp | GATACATCTAAGTCAAACGTAGCCTCCGGGTTGAGGTaGGCTGGGAGATTAACGTCTTACCTGGGGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: DTSKSNVASGLR*AGRLTSYLGSF Trigger: GAAGGACCCCAGGTAAGACGTTAATCTCCCAGCCCACCTCAACCCGGAGGCTACGTTTGACTTAGATGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGCTGATTGACTCATTCCTGATTGGCTTAGTGGAACAATATCCCACTCCAAACGTAGCCTCCGGGTaGAGGTGGGCTGGGAGATTA | + |
|
Preference number: 3 (lower is better) Translates to: QRLIDSFLIGLVEQYPTPNVASG*RWAGRL Trigger: TAATCTCCCAGCCCACCTCAACCCGGAGGCTACGTT...TGGAGTGGGATATTGTTCCACTAAGCCAATCAGGAATGAGTCAATCAGCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR GCA 72 bp | CATGCAAACAGGTCTAGGTCAGTCCCCGAATCGCTCTaGAGCAAACACGAGACAAAGCTTTGGAAGTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: HANRSRSVPESL*SKHETKLWKFK Trigger: CTTGAACTTCCAAAGCTTTGTCTCGTGTTTGCTGCAGAGCGATTCGGGGACTGACCTAGACCTGTTTGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAGGGGATAGTAGGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGGGTTGGAGAACCAGGTTaGAGCAATTTGGTAAATATG | + |
|
Preference number: 3 (lower is better) Translates to: SKGIVGLVTPSGPSPKGWVGEPG*SNLVNM Trigger: CATATTTACCAAATTGCTCAAACCTGGTTCTCCAAC...CCATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAAGGGGATAGTAGGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGTCTTGTTATTCCCAGTaGGATGTGACAGAGCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FQGDSRPCHTKWSKPKGMSCYSQ*DVTELF Trigger: AAACAGCTCTGTCACATCCAACTGGGAATAACAAGA...CATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 72 bp | GATCCTACAGAGATGGTCCAGCTGCCAGGACTACTTTaGCAGGCAGCATGTTACAGGACAAAAGATGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: DPTEMVQLPGLL*QAACYRTKDVR Trigger: TCTTACATCTTTTGTCCTGTAACATGCTGCCTGCCAAAGTAGTCCTGGCAGCTGGACCATCTCTGTAGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGCTGATTGACTCATTCCTGATTGGCTTAGTGGAACAATATCCCACTCCAAGGGTACATTCTCTCTaGAGGAGAGGCAGAATGACC | + |
|
Preference number: 3 (lower is better) Translates to: QRLIDSFLIGLVEQYPTPRVHSL*RRGRMT Trigger: GGTCATTCTGCCTCTCCTCAAGAGAGAATGTACCCT...TGGAGTGGGATATTGTTCCACTAAGCCAATCAGGAATGAGTCAATCAGCCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | TACATAGAGGTTGAAGGACAGCCTTGTGGAGTCTGTTCTTCTTTTCTACCTTTAGCTGCCAGGACTACTTaGGCAGGCAGCATGTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: YIEVEGQPCGVCSSFLPLAARTT*AGSMLQ Trigger: CTGTAACATGCTGCCTGCCAAAGTAGTCCTGGCAGC...TAAAGGTAGAAAAGAAGAACAGACTCCACAAGGCTGTCCTTCAACCTCTATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGAATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTTCAAAGAAGTCAGCCTaGCCTGGGGTGGGAAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: ENCTRNSHKLFATLGFWLSKKSA*PGVGSW Trigger: CCAACTTCCCACCCCAGGCAAGGCTGACTTCTTTGA...AAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR TCA 72 bp | GCCCAAGTTTCCCGGACTAAAGACCCAAAGGCTGATTaGCTCATTCCTGATTGGCTTAGTGGAACAATATCC | + |
|
Preference number: 3 (lower is better) Translates to: AQVSRTKDPKAD*LIPDWLSGTIS Trigger: GGATATTGTTCCACTAAGCCAATCAGGAATGAGTCAATCAGCCTTTGGGTCTTTAGTCCGGGAAACTTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR GCA 72 bp | CCACTTTGGGCTTCTGGCTTAGTGGGTTTGCAACAATaGACAACACACACACACTTGACTAGCTTTTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLWASGLVGLQQ*TTHTHLTSFSG Trigger: ACCAGAAAAGCTAGTCAAGTGTGTGTGTGTTGTGCATTGTTGCAAACCCACTAAGCCAGAAGCCCAAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 72 bp | AGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTaGCTTAGTGGGTTTGCAACAATGCACAACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: RNSHKLFATLGF*LSGFATMHNTH Trigger: GTGTGTGTTGTGCATTGTTGCAAACCCACTAAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 72 bp | GAGAAACTACTGTTGTTCGTAGACAGGTTAATCATTTaGCTTTGGTGGCTACCATCCTGTAAACATCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: EKLLLFVDRLII*LWWLPSCKHHS Trigger: GCTGTGATGTTTACAGGATGGTAGCCACCAAAGCCAAATGATTAACCTGTCTACGAACAACAGTAGTTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGAATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTAGACAGGTTAATCATTaGGCTTTGGTGGCTACCATC | + |
|
Preference number: 3 (lower is better) Translates to: ENCTRNSHKLFATLGFWLRQVNH*ALVATI Trigger: GATGGTAGCCACCAAAGCCAAATGATTAACCTGTCT...AAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 72 bp | CTGTTGTTCGTAGACAGGTTAATCATTTGGCTTTGGTaGCTACCATCCTGTAAACATCACAGCAGAAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: LLFVDRLIIWLW*LPSCKHHSRND Trigger: ATCATTTCTGCTGTGATGTTTACAGGATGGTAGCCACCAAAGCCAAATGATTAACCTGTCTACGAACAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 72 bp | CTACTGTTGTTCGTAGACAGGTTAATCATTTGGCTTTaGTGGCTACCATCCTGTAAACATCACAGCAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLLFVDRLIIWL*WLPSCKHHSRN Trigger: ATTTCTGCTGTGATGTTTACAGGATGGTAGCCACCAAAGCCAAATGATTAACCTGTCTACGAACAACAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 72 bp | ATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTaGGCTTCTGGCTTAGTGGGTTTGCAACAATGCACA | + |
|
Preference number: 3 (lower is better) Translates to: IVLGILISYLPL*ASGLVGLQQCT Trigger: TGTGCATTGTTGCAAACCCACTAAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | TACATAGAGGTTGAAGGACAGCCTTGTGGAGTCTGTTCTTCTTTTCTACCTTTACCTGAGAAACTACTGTaGTTCGTAGACAGGTTAATC | + |
|
Preference number: 3 (lower is better) Translates to: YIEVEGQPCGVCSSFLPLPEKLL*FVDRLI Trigger: GATTAACCTGTCTACGAACAACAGTAGTTTCTCAGG...TAAAGGTAGAAAAGAAGAACAGACTCCACAAGGCTGTCCTTCAACCTCTATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | TACATAGAGGTTGAAGGACAGCCTTGTGGAGTCTGTTCTTCTTTTCTACCTTTAGTAAGAATGCTGTCATaGCAGAATGTTGGGATATTG | + |
|
Preference number: 3 (lower is better) Translates to: YIEVEGQPCGVCSSFLPLVRMLS*QNVGIL Trigger: CAATATCCCAACATTCTGCAATGACAGCATTCTTAC...TAAAGGTAGAAAAGAAGAACAGACTCCACAAGGCTGTCCTTCAACCTCTATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR TCA 72 bp | AAGGCCACAAGGAGCATGAATGTGGATATCTGGAAGTaGGATAGTTATTCCATTCCCAGGAAAAGGAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: KATRSMNVDIWK*DSYSIPRKRKI Trigger: TATTTTCCTTTTCCTGGGAATGGAATAACTATCTCACTTCCAGATATCCACATTCATGCTCCTTGTGGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | GATCAAGAATTCAAACATGACATTCATATTCGTCCATGGCCAGCACAGATTCATAGTTACATGAATGGTTaGTGTTTGCGGAGAGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: DQEFKHDIHIRPWPAQIHSYMNG*CLRRVD Trigger: ATCTACTCTCCGCAAACACAAACCATTCATGTAACT...ATGAATCTGTGCTGGCCATGGACGAATATGAATGTCATGTTTGAATTCTTGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | ATAATACGGCACAAAAATGTTCTAAAGTGCAACCAAATCACAAGAGAGGAGATCCCTTCAGATAACCTGTaGGGTTTTCCTGTCAAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: IIRHKNVLKCNQITREEIPSDNL*GFPVKY Trigger: ATACTTGACAGGAAAACCCAACAGGTTATCTGAAGG...GATCTCCTCTCTTGTGATTTGGTTGCACTTTAGAACATTTTTGTGCCGTATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | TACATAGAGGTTGAAGGACAGCCTTGTGGAGTCTGTTCTTCTTTTCTACCTTTAAGGGTATATCACAGATaGAAAAGGTCACAGCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: YIEVEGQPCGVCSSFLPLRVYHR*KRSQQK Trigger: TTTTTGCTGTGACCTTTTCAATCTGTGATATACCCT...TAAAGGTAGAAAAGAAGAACAGACTCCACAAGGCTGTCCTTCAACCTCTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | ATAATACGGCACAAAAATGTTCTAAAGTGCAACCAAATCACAAGAGAGGAGATCCACACATGTATTCTGTaGGTAAGAATGCTGTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: IIRHKNVLKCNQITREEIHTCIL*VRMLSL Trigger: CAATGACAGCATTCTTACCAACAGAATACATGTGTG...GATCTCCTCTCTTGTGATTTGGTTGCACTTTAGAACATTTTTGTGCCGTATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR-3UTR CAA 90 bp | ATAATACGGCACAAAAATGTTCTAAAGTGCAACCAAATCACAAGAGAGGAGATCCCAGGTTTGAGCAATTaGGTAAATATGTCAGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: IIRHKNVLKCNQITREEIPGLSN*VNMSER Trigger: CCTTTCTGACATATTTACCAAATTGCTCAAACCTGG...GATCTCCTCTCTTGTGATTTGGTTGCACTTTAGAACATTTTTGTGCCGTATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR GCA 72 bp | TCAACAAGTTTGGAAGGCAAGCTCATTTACTCATCTTaGTGGTCCAAGAAGTTTTCAAAGAATAACAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: STSLEGKLIYSS*WSKKFSKNNNE Trigger: TTCATTGTTATTCTTTGAAAACTTCTTGGACCAGCAAGATGAGTAAATGAGCTTGCCTTCCAAACTTGTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CCA 72 bp | ACAAGTTTGGAAGGCAAGCTCATTTACTCATCTTGCTaGTCCAAGAAGTTTTCAAAGAATAACAATGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TSLEGKLIYSSC*SKKFSKNNNER Trigger: TCTTTCATTGTTATTCTTTGAAAACTTCTTGGACCAGCAAGATGAGTAAATGAGCTTGCCTTCCAAACTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR TCA 90 bp | TCCAAGGGGATAGTAGGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGGGGTGCGTTTGATGTGTaGGGGAGAGTCCCCCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SKGIVGLVTPSGPSPKGWGAFDV*GRVPLT Trigger: GGTGAGGGGGACTCTCCCTCACACATCAAACGCACC...CCATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR GCA 90 bp | TTCCAAGGGGATAGTAGGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGCTCGTGCGCTGCAGCTaGACTGATGACCAGCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQGDSRPCHTKWSKPKGMLVRCS*TDDQRQ Trigger: CTGGCGCTGGTCATCAGTGCAGCTGCAGCGCACGAG...CATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR TCA 90 bp | TTCCAAGGGGATAGTAGGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGCCTGCAGGGCACTGTTaGGGCAGCGAACCACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQGDSRPCHTKWSKPKGMPAGHC*GSEPLQ Trigger: CTGAAGTGGTTCGCTGCCTCAACAGTGCCCTGCAGG...CATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR CCA 90 bp | TTCCAAGGGGATAGTAGGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGGGATGTGGAAGAGGCTaGCCATGTTGGGCCCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: FQGDSRPCHTKWSKPKGMGCGRG*PCWARS Trigger: AGATCGGGCCCAACATGGCCAGCCTCTTCCACATCC...CATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR CCA 90 bp | TTCCAAGGGGATAGTAGGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGTCTGTCTGCAGGATGTaGAAGAGGCTGGCCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FQGDSRPCHTKWSKPKGMSVCRM*KRLAML Trigger: CAACATGGCCAGCCTCTTCCACATCCTGCAGACAGA...CATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR TCA 90 bp | CATCACAGCAGAAATGATCAAACCACCAGCGCTTATGCCCTCCTTCATTCTCTCCACCTCGGAGGTTCCTaGGGAGGACTTTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HHSRNDQTTSAYALLHSLHLGGS*GGLSAS Trigger: AGAAGCTGAAAGTCCTCCTCAGGAACCTCCGAGGTG...GAGAGAATGAAGGAGGGCATAAGCGCTGGTGGTTTGATCATTTCTGCTGTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 72 bp | TTTCAGGATACATCTAAGTCAAACGTAGCCTCCGGGTaGAGGTGGGCTGGGAGATTAACGTCTTACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FQDTSKSNVASG*RWAGRLTSYLG Trigger: CCCCAGGTAAGACGTTAATCTCCCAGCCCACCTCAACCCGGAGGCTACGTTTGACTTAGATGTATCCTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR TCA 90 bp | CAAAGGCTGATTGACTCATTCCTGATTGGCTTAGTGGAACAATATCCCACTCCACTTGGGAGGTGCGTTTaGTGTGTGAGGGAGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QRLIDSFLIGLVEQYPTPLGRCV*CVRESP Trigger: GGGACTCTCCCTCACACATCAAACGCACCTCCCAAG...TGGAGTGGGATATTGTTCCACTAAGCCAATCAGGAATGAGTCAATCAGCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR GCA 90 bp | GATCAAGAATTCAAACATGACATTCATATTCGTCCATGGCCAGCACAGATTCATGCCCCGCAGCCAACCTaGAGGGCACTGTTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DQEFKHDIHIRPWPAQIHAPQPT*RALLRQ Trigger: CTGCCTCAACAGTGCCCTGCAGGTTGGCTGCGGGGC...ATGAATCTGTGCTGGCCATGGACGAATATGAATGTCATGTTTGAATTCTTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGGGATAGTAGGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGGTGTTGTAGTATCTGTTaGAGAAGTGATTGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKGIVGLVTPSGPSPKGWCCSIC*RSDWAA Trigger: AGCTGCCCAATCACTTCTCCAACAGATACTACAACA...CCATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR TCA 90 bp | GAGAATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTGCGAACCACTTCAGCTaGATTTTGAGCCGCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: ENCTRNSHKLFATLGFWLANHFS*ILSRHP Trigger: CGGGTGGCGGCTCAAAATTCAGCTGAAGTGGTTCGC...AAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCTGATTGACTCATTCCTGATTGGCTTAGTGGAACAATATCCCACTCCATCGAACACCTCCGAATaGCAAGGAATACCTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRLIDSFLIGLVEQYPTPSNTSE*QGIPWR Trigger: CCTCCAAGGTATTCCTTGCCATTCGGAGGTGTTCGA...TGGAGTGGGATATTGTTCCACTAAGCCAATCAGGAATGAGTCAATCAGCCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR CCA 90 bp | ATAATACGGCACAAAAATGTTCTAAAGTGCAACCAAATCACAAGAGAGGAGATCGCTCTGGGGTGTGTCTaGGCACAGTGGTCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IIRHKNVLKCNQITREEIALGCV*AQWSVC Trigger: GCAGACAGACCACTGTGCCCAGACACACCCCAGAGC...GATCTCCTCTCTTGTGATTTGGTTGCACTTTAGAACATTTTTGTGCCGTATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR GCA 90 bp | CATCACAGCAGAAATGATCAAACCACCAGCGCTTATGCCCTCCTTCATTCTCTCGCTCTCTTTGACAAATaGTTTTCCCTGAGTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HHSRNDQTTSAYALLHSLALFDK*FSLSVK Trigger: TTTGACACTCAGGGAAAAGCATTTGTCAAAGAGAGC...GAGAGAATGAAGGAGGGCATAAGCGCTGGTGGTTTGATCATTTCTGCTGTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR CCA 90 bp | TATTGGCTAACTCTACCAGGTGACCATTCTAAAGGGATCTACATTTTCAGATTAAGAGGCTGGCCATGTTaGGCCCGATCTTCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: YWLTLPGDHSKGIYIFRLRGWPC*ARSSPS Trigger: TGATGGAGAAGATCGGGCCCAACATGGCCAGCCTCT...TAATCTGAAAATGTAGATCCCTTTAGAATGGTCACCTGGTAGAGTTAGCCAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 72 bp | GTTGGGTTCAAGGACAATGACCCTGAGAAACTACTGTaGTTCGTAGACAGGTTAATCATTTGGCTTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGFKDNDPEKLL*FVDRLIIWLWW Trigger: CCACCAAAGCCAAATGATTAACCTGTCTACGAACAACAGTAGTTTCTCAGGGTCATTGTCCTTGAACCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR TCA 90 bp | ATAATACGGCACAAAAATGTTCTAAAGTGCAACCAAATCACAAGAGAGGAGATCGGAATACCTTGGAGGTaGTCCCATTGGCGATGCACT | + |
|
Preference number: 4 (lower is better) Translates to: IIRHKNVLKCNQITREEIGIPWR*SHWRCT Trigger: AGTGCATCGCCAATGGGATCACCTCCAAGGTATTCC...GATCTCCTCTCTTGTGATTTGGTTGCACTTTAGAACATTTTTGTGCCGTATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 72 bp | CTTGAGGAGAGGCAGAATGACCACACATGTATTCTGTaGGTAAGAATGCTGTCATTGCAGAATGTTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LEERQNDHTCIL*VRMLSLQNVGI Trigger: TATCCCAACATTCTGCAATGACAGCATTCTTACCAACAGAATACATGTGTGGTCATTCTGCCTCTCCTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 72 bp | TTAGTGGGTTTGCAACAATGCACAACACACACACACTaGACTAGCTTTTCTGGTTCAAAGAAGTCAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVGLQQCTTHTH*TSFSGSKKSAL Trigger: CAAGGCTGACTTCTTTGAACCAGAAAAGCTAGTCAAGTGTGTGTGTGTTGTGCATTGTTGCAAACCCACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR CCA 90 bp | GAGAATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTCATCTGTGTCACATGTaGAGTTTTCCAGGCATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ENCTRNSHKLFATLGFWLHLCHM*SFPGMQ Trigger: TTGCATGCCTGGAAAACTCCACATGTGACACAGATG...AAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 72 bp | AATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTaGGGCTTCTGGCTTAGTGGGTTTGCAACAATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NCTRNSHKLFAT*GFWLSGFATMH Trigger: GTGCATTGTTGCAAACCCACTAAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 72 bp | TGTTCTTCTTTTCTACCTTTATGTGGGATCTGGGGATaGAACTTAGGTCAACAAGTTTGGAAGGCAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSSFLPLCGIWG*NLGQQVWKASS Trigger: TGAGCTTGCCTTCCAAACTTGTTGACCTAAGTTCAATCCCCAGATCCCACATAAAGGTAGAAAAGAAGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 72 bp | CAAAGGGATGGTCTTTTTGATTCTTGTTATTCCCAGTaGGATGTGACAGAGCTGTTTCAGGATACATCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRDGLFDSCYSQ*DVTELFQDTSK Trigger: CTTAGATGTATCCTGAAACAGCTCTGTCACATCCAACTGGGAATAACAAGAATCAAAAAGACCATCCCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 72 bp | CTTAAGAGAATTGTACTAGGAATTCTCATAAGCTATTaGCCACTTTGGGCTTCTGGCTTAGTGGGTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKRIVLGILISY*PLWASGLVGLQ Trigger: TTGCAAACCCACTAAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTCTTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR TCA 90 bp | GATCAAGAATTCAAACATGACATTCATATTCGTCCATGGCCAGCACAGATTCATACAAATGCTTTTCCCTaGGTGTCAAATTTAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DQEFKHDIHIRPWPAQIHTNAFP*VSNLAA Trigger: TGCTGCTAAATTTGACACTCAGGGAAAAGCATTTGT...ATGAATCTGTGCTGGCCATGGACGAATATGAATGTCATGTTTGAATTCTTGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| 3UTR CAA 72 bp | AAGATGCTAGCTCAAAGTCTGGTTGGAGAACCAGGTTaGAGCAATTTGGTAAATATGTCAGAAAGGAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: KMLAQSLVGEPG*SNLVNMSERKL Trigger: TAATTTCCTTTCTGACATATTTACCAAATTGCTCAAACCTGGTTCTCCAACCAGACTTTGAGCTAGCATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS CCA 90 bp | GTGCGCCTCCTATTGAAGTCAGCTCTGGGGTGTGTCTGGGCACAGTaGTCTGTCTGCAGGATGTGGAAGAGGCTGGCCATGTTGGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VRLLLKSALGCVWAQ*SVCRMWKRLAMLGP Trigger: CGGGCCCAACATGGCCAGCCTCTTCCACATCCTGCAGACAGACCACTGTGCCCAGACACACCCCAGAGCTGACTTCAATAGGAGGCGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS GCA 90 bp | CTATTGAAGTCAGCTCTGGGGTGTGTCTGGGCACAGTGGTCTGTCTaGAGGATGTGGAAGAGGCTGGCCATGTTGGGCCCGATCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLKSALGCVWAQWSV*RMWKRLAMLGPIFS Trigger: GGAGAAGATCGGGCCCAACATGGCCAGCCTCTTCCACATCCTGCAGACAGACCACTGTGCCCAGACACACCCCAGAGCTGACTTCAATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS CCA 90 bp | GGCTCATTTGTGCGCCTCCTATTGAAGTCAGCTCTGGGGTGTGTCTaGGCACAGTGGTCTGTCTGCAGGATGTGGAAGAGGCTGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GSFVRLLLKSALGCV*AQWSVCRMWKRLAM Trigger: CATGGCCAGCCTCTTCCACATCCTGCAGACAGACCACTGTGCCCAGACACACCCCAGAGCTGACTTCAATAGGAGGCGCACAAATGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS CCA 90 bp | GTCCCCCTCACCTCGGAGGTTCCTGAGGAGGACTTTCAGCTTCTGTaGCTCATTTGTGCGCCTCCTATTGAAGTCAGCTCTGGGGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VPLTSEVPEEDFQLL*LICAPPIEVSSGVC Trigger: ACACACCCCAGAGCTGACTTCAATAGGAGGCGCACAAATGAGCCACAGAAGCTGAAAGTCCTCCTCAGGAACCTCCGAGGTGAGGGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR CAA 90 bp | TTCCAAGGGGATAGTAGGCCTTGTCACACCAAGTGGTCCAAGCCCAAAGGGATGACCTGCAGGGCACTGTaGAGGCAGCGAACCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FQGDSRPCHTKWSKPKGMTCRAL*RQRTTS Trigger: TGAAGTGGTTCGCTGCCTCAACAGTGCCCTGCAGGT...CATCCCTTTGGGCTTGGACCACTTGGTGTGACAAGGCCTACTATCCCCTTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR CAA 90 bp | TACATAGAGGTTGAAGGACAGCCTTGTGGAGTCTGTTCTTCTTTTCTACCTTTAGTGATGGCTTCCGGGTaGCGCTTGGCGATGCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: YIEVEGQPCGVCSSFLPLVMASG*RLAMLQ Trigger: TTGCAGCATCGCCAAGCGCAACCCGGAAGCCATCAC...TAAAGGTAGAAAAGAAGAACAGACTCCACAAGGCTGTCCTTCAACCTCTATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR CAA 90 bp | GAGAATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTAAGAGGCTGGCCATGTaGGGCCCGATCTTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ENCTRNSHKLFATLGFWLKRLAM*GPIFSI Trigger: GATGGAGAAGATCGGGCCCAACATGGCCAGCCTCTT...AAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR CAA 90 bp | GATCAAGAATTCAAACATGACATTCATATTCGTCCATGGCCAGCACAGATTCATGCTTCCGGGTTGCGCTaGGCGATGCTGCAAACGTTA | + |
|
Preference number: 5 (lower is better) Translates to: DQEFKHDIHIRPWPAQIHASGLR*AMLQTL Trigger: TAACGTTTGCAGCATCGCCAAGCGCAACCCGGAAGC...ATGAATCTGTGCTGGCCATGGACGAATATGAATGTCATGTTTGAATTCTTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR CAA 90 bp | GAGAATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTATGGCAAGGAATACCTaGGAGGTGATCCCATTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ENCTRNSHKLFATLGFWLMARNT*EVIPLA Trigger: CGCCAATGGGATCACCTCCAAGGTATTCCTTGCCAT...AAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS-3UTR CAA 90 bp | GAGAATTGTACTAGGAATTCTCATAAGCTATTTGCCACTTTGGGCTTCTGGCTTTTTGTGCGCCTCCTATaGAAGTCAGCTCTGGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ENCTRNSHKLFATLGFWLFVRLL*KSALGC Trigger: ACACCCCAGAGCTGACTTCAATAGGAGGCGCACAAA...AAGCCAGAAGCCCAAAGTGGCAAATAGCTTATGAGAATTCCTAGTACAATTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS GCA 72 bp | GGGGCTCACAGAATCATTTTGTTCCGCCTCGTGCGCTaGAGCTGCACTGATGACCAGCGCCAGAATCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GAHRIILFRLVR*SCTDDQRQNHC Trigger: GCAGTGATTCTGGCGCTGGTCATCAGTGCAGCTGCAGCGCACGAGGCGGAACAAAATGATTCTGTGAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS CAA 72 bp | CGCCACCCGGGATTTTCTGGGGCTCACAGAATCATTTaGTTCCGCCTCGTGCGCTGCAGCTGCACTGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: RHPGFSGAHRII*FRLVRCSCTDD Trigger: GTCATCAGTGCAGCTGCAGCGCACGAGGCGGAACAAAATGATTCTGTGAGCCCCAGAAAATCCCGGGTGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS CAA 90 bp | TGGGCACAGTGGTCTGTCTGCAGGATGTGGAAGAGGCTGGCCATGTaGGGCCCGATCTTCTCCATCAGGCTGTCTCTGATTGTACTGACC | + |
|
Preference number: 6 (lower is better) Translates to: WAQWSVCRMWKRLAM*GPIFSIRLSLIVLT Trigger: GGTCAGTACAATCAGAGACAGCCTGATGGAGAAGATCGGGCCCAACATGGCCAGCCTCTTCCACATCCTGCAGACAGACCACTGTGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS TCA 72 bp | TGTGTGAGGGAGAGTCCCCCTCACCTCGGAGGTTCCTaGGGAGGACTTTCAGCTTCTGTGGCTCATTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: CVRESPPHLGGS*GGLSASVAHLC Trigger: GCACAAATGAGCCACAGAAGCTGAAAGTCCTCCTCAGGAACCTCCGAGGTGAGGGGGACTCTCCCTCACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS GCA 72 bp | TTTCTGGGGCTCACAGAATCATTTTGTTCCGCCTCGTaGGCTGCAGCTGCACTGATGACCAGCGCCAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: FLGLTESFCSAS*AAAALMTSARI Trigger: GATTCTGGCGCTGGTCATCAGTGCAGCTGCAGCGCACGAGGCGGAACAAAATGATTCTGTGAGCCCCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS CAA 72 bp | TTGGGCAGCTGTATGACTTCAGTGATGGCTTCCGGGTaGCGCTTGGCGATGCTGCAAACGTTAAGCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGSCMTSVMASG*RLAMLQTLSLL Trigger: CAGCAAGCTTAACGTTTGCAGCATCGCCAAGCGCAACCCGGAAGCCATCACTGAAGTCATACAGCTGCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS CAA 72 bp | TGGAAAGTCGAACACCTCCGAATGGCAAGGAATACCTaGGAGGTGATCCCATTGGCGATGCACTTTAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WKVEHLRMARNT*EVIPLAMHFKL Trigger: GAGCTTAAAGTGCATCGCCAATGGGATCACCTCCAAGGTATTCCTTGCCATTCGGAGGTGTTCGACTTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS CAA 90 bp | ATCATCCTCTGGAAAGTCGAACACCTCCGAATGGCAAGGAATACCTaGGAGGTGATCCCATTGGCGATGCACTTTAAGCTCTCTTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: IILWKVEHLRMARNT*EVIPLAMHFKLSLT Trigger: TGTCAAAGAGAGCTTAAAGTGCATCGCCAATGGGATCACCTCCAAGGTATTCCTTGCCATTCGGAGGTGTTCGACTTTCCAGAGGATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||
| CDS CAA 72 bp | CTCCGAATGGCAAGGAATACCTTGGAGGTGATCCCATaGGCGATGCACTTTAAGCTCTCTTTGACAAATGCT | + |
|
Preference number: 6 (lower is better) Translates to: LRMARNTLEVIP*AMHFKLSLTNA Trigger: AGCATTTGTCAAAGAGAGCTTAAAGTGCATCGCCAATGGGATCACCTCCAAGGTATTCCTTGCCATTCGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014957.10 |
||