Pregenerated sensors for STBD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047963Ensembl transcript IDs: ENSMUST00000050952.4, ENSMUST00000200941.2, ENSMUST00000202332.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGTGCCTAGACACCACTTCCCAGTCCTCGTGGCCTGCCTGGTCCTaGCTGACTGCTTTAGCTCTGTCCACAAGCAGGCTGCTGGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: ECLDTTSQSSWPAWS*LTALALSTSRLLEG Trigger: GCCCTCCAGCAGCCTGCTTGTGGACAGAGCTAAAGCAGTCAGTCAGGACCAGGCAGGCCACGAGGACTGGGAAGTGGTGTCTAGGCACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR GCA 90 bp | AGACACCACTTCCCAGTCCTCGTGGCCTGCCTGGTCCTGACTGACTaGTTTAGCTCTGTCCACAAGCAGGCTGCTGGAGGGCAGCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: RHHFPVLVACLVLTD*FSSVHKQAAGGQLC Trigger: GCAAAGCTGCCCTCCAGCAGCCTGCTTGTGGACAGAGCTAAAGCAGTCAGTCAGGACCAGGCAGGCCACGAGGACTGGGAAGTGGTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR TCA 90 bp | ACCTCAGCATCTCACACCTCAATCCCTCATGCTCTGCTTCCTGGGTaGCCACCTCTGAATAGGCTTTCAGCCACTAAGACAAAGGCGTAC | + |
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Preference number: 1 (lower is better) Translates to: TSASHTSIPHALLPG*PPLNRLSATKTKAY Trigger: GTACGCCTTTGTCTTAGTGGCTGAAAGCCTATTCAGAGGTGGTCACCCAGGAAGCAGAGCATGAGGGATTGAGGTGTGAGATGCTGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR GCA 90 bp | GTAGTGCACCTGGAACTGGATGCTGACCTGTTGAGGTTTCAGAGATaGCACTTTCCCATCTACTTCCCAGCCTCTTCCTCCCACAAGACT | + |
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Preference number: 1 (lower is better) Translates to: VVHLELDADLLRFQR*HFPIYFPASSSHKT Trigger: AGTCTTGTGGGAGGAAGAGGCTGGGAAGTAGATGGGAAAGTGGCATCTCTGAAACCTCAACAGGTCAGCATCCAGTTCCAGGTGCACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR CCA 90 bp | CATGAGATCCTGGGCTTTGATTTCTTGCCGCTTCAGAGTCGGCCCTaGAGTGTGTGTCTGGAATCTTCCCAACAGGAACAAACTCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: HEILGFDFLPLQSRP*SVCLESSQQEQTLW Trigger: CCAGAGAGTTTGTTCCTGTTGGGAAGATTCCAGACACACACTCCAGGGCCGACTCTGAAGCGGCAAGAAATCAAAGCCCAGGATCTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR CCA 90 bp | TGTTTCTTGTCCTTTGGGGAGTCTCCATTCTCCTCCATGAGATCCTaGGCTTTGATTTCTTGCCGCTTCAGAGTCGGCCCTGGAGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: CFLSFGESPFSSMRS*ALISCRFRVGPGVC Trigger: ACACACTCCAGGGCCGACTCTGAAGCGGCAAGAAATCAAAGCCCAGGATCTCATGGAGGAGAATGGAGACTCCCCAAAGGACAAGAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR TCA 90 bp | GAGCCAACGATCAAAAGCACACTTGGGGAGTCTCAGCACACACCATaGGAGAGAATGAAGTGGCAAGTTGCAAAGTCTCCCACAGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: EPTIKSTLGESQHTP*ERMKWQVAKSPTVQ Trigger: CTGGACTGTGGGAGACTTTGCAACTTGCCACTTCATTCTCTCTCATGGTGTGTGCTGAGACTCCCCAAGTGTGCTTTTGATCGTTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200941.2 |
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| 3UTR GCA 90 bp | TGGGGAGTCTCAGCACACACCATGAGAGAGAATGAAGTGGCAAGTTaGAAAGTCTCCCACAGTCCAGACCATGTTGGCAGGTATCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: WGVSAHTMRENEVAS*KVSHSPDHVGRYPK Trigger: CTTTGGATACCTGCCAACATGGTCTGGACTGTGGGAGACTTTGCAACTTGCCACTTCATTCTCTCTCATGGTGTGTGCTGAGACTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200941.2 |
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| 3UTR TCA 90 bp | TCAAAAGCACACTTGGGGAGTCTCAGCACACACCATGAGAGAGAATaGAGTGGCAAGTTGCAAAGTCTCCCACAGTCCAGACCATGTTGG | + |
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Preference number: 1 (lower is better) Translates to: SKAHLGSLSTHHERE*SGKLQSLPQSRPCW Trigger: CCAACATGGTCTGGACTGTGGGAGACTTTGCAACTTGCCACTTCATTCTCTCTCATGGTGTGTGCTGAGACTCCCCAAGTGTGCTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200941.2 |
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| 3UTR GCA 90 bp | TTAAGCTATGCAGTGCGCTCTAAAGCCTTAGCCTTGTCCACATTCTaGTGCAGCCTCTTGGATGCTCTGAAAACTGAGTCAGTGAATCCC | + |
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Preference number: 1 (lower is better) Translates to: LSYAVRSKALALSTF*CSLLDALKTESVNP Trigger: GGGATTCACTGACTCAGTTTTCAGAGCATCCAAGAGGCTGCAGCAGAATGTGGACAAGGCTAAGGCTTTAGAGCGCACTGCATAGCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR GCA 90 bp | GTCCTGATGTGTCAGCACAAACCAGTCAATACAATAAGGGACAAGTaGCAGCTTACAGGAAGCATTATCTGCAGGCATACATCTTCCTAC | + |
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Preference number: 1 (lower is better) Translates to: VLMCQHKPVNTIRDK*QLTGSIICRHTSSY Trigger: GTAGGAAGATGTATGCCTGCAGATAATGCTTCCTGTAAGCTGGCACTTGTCCCTTATTGTATTGACTGGTTTGTGCTGACACATCAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR CAA 90 bp | AGCAGGCTGCTGGAGGGCAGCTTTGCGGCCACACTGCCAGCTACTTaGACAGCTGTTTCTTGTCCTTTGGGGAGTCTCCATTCTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SRLLEGSFAATLPAT*TAVSCPLGSLHSPP Trigger: TGGAGGAGAATGGAGACTCCCCAAAGGACAAGAAACAGCTGTCAAAGTAGCTGGCAGTGTGGCCGCAAAGCTGCCCTCCAGCAGCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR-3UTR GCA 90 bp | CACCTCAGCATCTCACACCTCAATCCCTCATGCTCTGCTTCCTGGGTGACCACCGCCTTGTCCACATTCTaGTGCAGCCTCTTGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: HLSISHLNPSCSASWVTTALSTF*CSLLDA Trigger: AGCATCCAAGAGGCTGCAGCAGAATGTGGACAAGGC...GGTGGTCACCCAGGAAGCAGAGCATGAGGGATTGAGGTGTGAGATGCTGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGTCCAACCAGGGCACTGTGGGTAAAGGAGGGATGTACCAGACTCAGACCTCACCTCAATCCCTCATaGTCTGCTTCCTGGGTGACC | + |
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Preference number: 2 (lower is better) Translates to: DGPTRALWVKEGCTRLRPHLNPS*SASWVT Trigger: GGTCACCCAGGAAGCAGAGCATGAGGGATTGAGGTG...AGGTCTGAGTCTGGTACATCCCTCCTTTACCCACAGTGCCCTGGTTGGACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| 3UTR-3UTR TCA 90 bp | CACTGTGTCTGCAGGCAGGAAGACAGAATGAGACCAGAGCCCGTCTTTGCAGTAGCTCTGCTTCCTGGGTaGCCACCTCTGAATAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: HCVCRQEDRMRPEPVFAVALLPG*PPLNRL Trigger: AAGCCTATTCAGAGGTGGTCACCCAGGAAGCAGAGC...TACTGCAAAGACGGGCTCTGGTCTCATTCTGTCTTCCTGCCTGCAGACACAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCATTGACCCAGTCTGCTCCAACATTCTGCAGCCGCTGTGCTTCCGGCAGGTCTCGAAGATGCTCATaGGAGAGAATGAAGTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: LALTQSAPTFCSRCASGRSRRCS*ERMKWQ Trigger: TTGCCACTTCATTCTCTCTCATGAGCATCTTCGAGA...CCTGCCGGAAGCACAGCGGCTGCAGAATGTTGGAGCAGACTGGGTCAATGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTCAGCATCTCACACCTCAATCCCTCATGCTCTGCTTCCTGGGTGACCACCGCTCATGAGAGAGAATaGAGTGGCAAGTTGCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: HLSISHLNPSCSASWVTTAHERE*SGKLQS Trigger: ACTTTGCAACTTGCCACTTCATTCTCTCTCATGAGC...GGTGGTCACCCAGGAAGCAGAGCATGAGGGATTGAGGTGTGAGATGCTGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGACCTGTTACTCCCAGTCCTCAAGGAGCCCTTCAAACCACCTCAGCATCTCTTGTCCACATTCTGCTaGAGCCTCTTGGATGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SDLLLPVLKEPFKPPQHLLSTFC*SLLDAL Trigger: CAGAGCATCCAAGAGGCTGCAGCAGAATGTGGACAA...GAGATGCTGAGGTGGTTTGAAGGGCTCCTTGAGGACTGGGAGTAACAGGTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGTCTGCTCCAACATTCTGCAGCCGCTGTGCTTCCGGCAGGTTACCAAGAAATGAAGTGGCAAGTTaGAAAGTCTCCCACAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: TQSAPTFCSRCASGRLPRNEVAS*KVSHSP Trigger: TGGACTGTGGGAGACTTTGCAACTTGCCACTTCATT...TCTTGGTAACCTGCCGGAAGCACAGCGGCTGCAGAATGTTGGAGCAGACTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR CAA 90 bp | CTAAGGGCGCTCTACCTTGTACCCGTGCAGTTGCTTAGTTGCTCCTaGCCCATATGTAGTCCATACCTCAGGTGTACTACCCAAGATGCA | + |
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Preference number: 2 (lower is better) Translates to: LRALYLVPVQLLSCS*PICSPYLRCTTQDA Trigger: TGCATCTTGGGTAGTACACCTGAGGTATGGACTACATATGGGCAAGGAGCAACTAAGCAACTGCACGGGTACAAGGTAGAGCGCCCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR-3UTR TCA 90 bp | CCACCTCAGCATCTCACACCTCAATCCCTCATGCTCTGCTTCCTGGGTGACCACGGTCACAGTTCCGTATaGTGTAAACAGTGTTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: PPQHLTPQSLMLCFLGDHGHSSV*CKQCCF Trigger: AAAGCAACACTGTTTACATCATACGGAACTGTGACC...GTGGTCACCCAGGAAGCAGAGCATGAGGGATTGAGGTGTGAGATGCTGAGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGTGTCTGCAGGCAGGAAGACAGAATGAGACCAGAGCCCGTCTTTGCAGTACACTCCGATCCTTACTaGTCACAGTTCCGTATGATG | + |
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Preference number: 2 (lower is better) Translates to: HCVCRQEDRMRPEPVFAVHSDPY*SQFRMM Trigger: CATCATACGGAACTGTGACCAGTAAGGATCGGAGTG...TACTGCAAAGACGGGCTCTGGTCTCATTCTGTCTTCCTGCCTGCAGACACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGGGCAGCTTTGCGGCCACACTGCCAGCTACTTTGACAGCTGTTTCTTGTACAATAAGGGACAAGTaGCAGCTTACAGGAAGCATT | + |
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Preference number: 2 (lower is better) Translates to: LEGSFAATLPATLTAVSCTIRDK*QLTGSI Trigger: AATGCTTCCTGTAAGCTGGCACTTGTCCCTTATTGT...ACAAGAAACAGCTGTCAAAGTAGCTGGCAGTGTGGCCGCAAAGCTGCCCTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR CAA 90 bp | ACCGCCTTTACTTTAAGCTATGCAGTGCGCTCTAAAGCCTTAGCCTaGTCCACATTCTGCTGCAGCCTCTTGGATGCTCTGAAAACTGAG | + |
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Preference number: 2 (lower is better) Translates to: TAFTLSYAVRSKALA*STFCCSLLDALKTE Trigger: CTCAGTTTTCAGAGCATCCAAGAGGCTGCAGCAGAATGTGGACAAGGCTAAGGCTTTAGAGCGCACTGCATAGCTTAAAGTAAAGGCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCAACTACCCAGGATGATCAATTCCTCAAGTCCTGATGTGTCAGCACAAACCTGGAAAAGATGCCTCTaGGGCAGCCCATTTGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: MQLPRMINSSSPDVSAQTWKRCL*GSPFVD Trigger: GTCAACAAATGGGCTGCCCCAGAGGCATCTTTTCCA...GGTTTGTGCTGACACATCAGGACTTGAGGAATTGATCATCCTGGGTAGTTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTCAGTATGGTCCTATAGAGAATTTCACTCGCTGGTATGTAAGGAGAGTGGCTCTGCTTCCTGGGTaGCCACCTCTGAATAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: ILQYGPIENFTRWYVRRVALLPG*PPLNRL Trigger: AAGCCTATTCAGAGGTGGTCACCCAGGAAGCAGAGC...CACTCTCCTTACATACCAGCGAGTGAAATTCTCTATAGGACCATACTGAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCACAGTTCCGTATGATGTAAACAGTGTTGCTTTAGCTGTGTTTGATGGGCCTGGAGTGTGTGTCTaGAATCTTCCCAACAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: LVTVPYDVNSVALAVFDGPGVCV*NLPNRN Trigger: GTTCCTGTTGGGAAGATTCCAGACACACACTCCAGG...CCCATCAAACACAGCTAAAGCAACACTGTTTACATCATACGGAACTGTGACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR-3UTR TCA 90 bp | GGAATAAAAACTAACAGGAAGTCTAGAGTTTCACTCCGATCCTTACTGGTCACAAATGAGGTGGAGCAGTaGGCAGAGATGGTCCAACCA | + |
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Preference number: 2 (lower is better) Translates to: GIKTNRKSRVSLRSLLVTNEVEQ*AEMVQP Trigger: TGGTTGGACCATCTCTGCTCACTGCTCCACCTCATT...TGTGACCAGTAAGGATCGGAGTGAAACTCTAGACTTCCTGTTAGTTTTTATTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGTATGTAAGGAGAGTGAAGAGTTAACAGATGGAAAAGATGCCTCTGGGGCAACAATAAGGGACAAGTaGCAGCTTACAGGAAGCATT | + |
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Preference number: 2 (lower is better) Translates to: LVCKESEELTDGKDASGATIRDK*QLTGSI Trigger: AATGCTTCCTGTAAGCTGGCACTTGTCCCTTATTGT...TGCCCCAGAGGCATCTTTTCCATCTGTTAACTCTTCACTCTCCTTACATACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| 3UTR TCA 72 bp | GACACCACTTCCCAGTCCTCGTGGCCTGCCTGGTCCTaGCTGACTGCTTTAGCTCTGTCCACAAGCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: DTTSQSSWPAWS*LTALALSTSRL Trigger: CAGCCTGCTTGTGGACAGAGCTAAAGCAGTCAGTCAGGACCAGGCAGGCCACGAGGACTGGGAAGTGGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR-3UTR CAA 90 bp | CACCTCAGCATCTCACACCTCAATCCCTCATGCTCTGCTTCCTGGGTGACCACCCTGGGCTTTGATTTCTaGCCGCTTCAGAGTCGGCCC | + |
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Preference number: 3 (lower is better) Translates to: HLSISHLNPSCSASWVTTLGFDF*PLQSRP Trigger: GGGCCGACTCTGAAGCGGCAAGAAATCAAAGCCCAG...GGTGGTCACCCAGGAAGCAGAGCATGAGGGATTGAGGTGTGAGATGCTGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR GCA 72 bp | CCATTCTCCTCCATGAGATCCTGGGCTTTGATTTCTTaGCGCTTCAGAGTCGGCCCTGGAGTGTGTGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: PFSSMRSWALIS*RFRVGPGVCVW Trigger: CCAGACACACACTCCAGGGCCGACTCTGAAGCGGCAAGAAATCAAAGCCCAGGATCTCATGGAGGAGAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR GCA 72 bp | ATTGACCCAGTCTGCTCCAACATTCTGCAGCCGCTGTaGTTCCGGCAGGTTACCAAGATCTTTGCTCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: IDPVCSNILQPL*FRQVTKIFALR Trigger: TCTGAGAGCAAAGATCTTGGTAACCTGCCGGAAGCACAGCGGCTGCAGAATGTTGGAGCAGACTGGGTCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR TCA 72 bp | TCTCACACCTCAATCCCTCATGCTCTGCTTCCTGGGTaGCCACCTCTGAATAGGCTTTCAGCCACTAAGACA | + |
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Preference number: 3 (lower is better) Translates to: SHTSIPHALLPG*PPLNRLSATKT Trigger: TGTCTTAGTGGCTGAAAGCCTATTCAGAGGTGGTCACCCAGGAAGCAGAGCATGAGGGATTGAGGTGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR TCA 72 bp | ATCTCCCAAGGCTCTCATGGTCTCCAGTCACTGCAATaGACTGCACATCGGTGTTTGTGGTGTAGTGCACCT | + |
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Preference number: 3 (lower is better) Translates to: ISQGSHGLQSLQ*TAHRCLWCSAP Trigger: AGGTGCACTACACCACAAACACCGATGTGCAGTTCATTGCAGTGACTGGAGACCATGAGAGCCTTGGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR TCA 72 bp | CACTTGGGGAGTCTCAGCACACACCATGAGAGAGAATaGAGTGGCAAGTTGCAAAGTCTCCCACAGTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: HLGSLSTHHERE*SGKLQSLPQSR Trigger: TCTGGACTGTGGGAGACTTTGCAACTTGCCACTTCATTCTCTCTCATGGTGTGTGCTGAGACTCCCCAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200941.2 |
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| 3UTR GCA 72 bp | GTGCGCTCTAAAGCCTTAGCCTTGTCCACATTCTGCTaGAGCCTCTTGGATGCTCTGAAAACTGAGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: VRSKALALSTFC*SLLDALKTESV Trigger: CACTGACTCAGTTTTCAGAGCATCCAAGAGGCTGCAGCAGAATGTGGACAAGGCTAAGGCTTTAGAGCGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR GCA 72 bp | TCAGCACACACCATGAGAGAGAATGAAGTGGCAAGTTaGAAAGTCTCCCACAGTCCAGACCATGTTGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SAHTMRENEVAS*KVSHSPDHVGR Trigger: CCTGCCAACATGGTCTGGACTGTGGGAGACTTTGCAACTTGCCACTTCATTCTCTCTCATGGTGTGTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200941.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCTGAATAGGCTTTCAGCCACTAAGACAAAGGCGTACTTGCTAATGTCTCGCTTCTGCTGCAGCCTCTaGGATGCTCTGAAAACTGAG | + |
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Preference number: 3 (lower is better) Translates to: PLNRLSATKTKAYLLMSRFCCSL*DALKTE Trigger: CTCAGTTTTCAGAGCATCCAAGAGGCTGCAGCAGAA...GCGAGACATTAGCAAGTACGCCTTTGTCTTAGTGGCTGAAAGCCTATTCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR-3UTR CAA 90 bp | CACCTCAGCATCTCACACCTCAATCCCTCATGCTCTGCTTCCTGGGTGACCACCAGGTTACCAAGATCTTaGCTCTCAGAAATCAAATGT | + |
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Preference number: 3 (lower is better) Translates to: HLSISHLNPSCSASWVTTRLPRS*LSEIKC Trigger: ACATTTGATTTCTGAGAGCAAAGATCTTGGTAACCT...GGTGGTCACCCAGGAAGCAGAGCATGAGGGATTGAGGTGTGAGATGCTGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR TCA 72 bp | GTCCGTTGCTTTCTCGAAGATGCTCATGAGAGAGAATaGAGTGGCAAGTTGCAAAGTCTCCCACAGTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: VRCFLEDAHERE*SGKLQSLPQSR Trigger: TCTGGACTGTGGGAGACTTTGCAACTTGCCACTTCATTCTCTCTCATGAGCATCTTCGAGAAAGCAACGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR TCA 72 bp | ATCAAAAGCACACTTGGGGAGTCTCAGCACACACCATaGGAGAGAATGAAGTGGCAAGTTGCAAAGTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: IKSTLGESQHTP*ERMKWQVAKSP Trigger: GGGAGACTTTGCAACTTGCCACTTCATTCTCTCTCATGGTGTGTGCTGAGACTCCCCAAGTGTGCTTTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200941.2 |
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| 3UTR-3UTR CAA 90 bp | CATACCTCAGGTGTACTACCCAAGATGCAACTACCCAGGATGATCAATTCCTCATTCTGCTGCAGCCTCTaGGATGCTCTGAAAACTGAG | + |
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Preference number: 3 (lower is better) Translates to: HTSGVLPKMQLPRMINSSFCCSL*DALKTE Trigger: CTCAGTTTTCAGAGCATCCAAGAGGCTGCAGCAGAA...TGAGGAATTGATCATCCTGGGTAGTTGCATCTTGGGTAGTACACCTGAGGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCTGAATAGGCTTTCAGCCACTAAGACAAAGGCGTACTTGCTAATGTCTCGCTTGCTTAGTTGCTCCTaGCCCATATGTAGTCCATAC | + |
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Preference number: 3 (lower is better) Translates to: PLNRLSATKTKAYLLMSRLLSCS*PICSPY Trigger: GTATGGACTACATATGGGCAAGGAGCAACTAAGCAA...GCGAGACATTAGCAAGTACGCCTTTGTCTTAGTGGCTGAAAGCCTATTCAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR TCA 72 bp | CCTCCCACAAGACTGTTTGTGCTGTCGTCCATTCTCTaGTTTAGACTTAACCTAGAAGCCTCAAGACTGCCA | + |
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Preference number: 3 (lower is better) Translates to: PPTRLFVLSSIL*FRLNLEASRLP Trigger: TGGCAGTCTTGAGGCTTCTAGGTTAAGTCTAAATCAGAGAATGGACGACAGCACAAACAGTCTTGTGGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCTCCCACAAGACTGTTTGTGCTGTCGTCCATTCTCTGATTTAGACTTAACCACACTGCCAGCTACTTaGACAGCTGTTTCTTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: FLPQDCLCCRPFSDLDLTTLPAT*TAVSCP Trigger: AGGACAAGAAACAGCTGTCAAAGTAGCTGGCAGTGT...GGTTAAGTCTAAATCAGAGAATGGACGACAGCACAAACAGTCTTGTGGGAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR TCA 72 bp | TGGACAAAAGCCACACTAGCAAATCTGAAAGAGCCCTaGTGGCTACAATTGGAATCACACCGCCTTTACTTT | + |
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Preference number: 3 (lower is better) Translates to: WTKATLANLKEP*WLQLESHRLYF Trigger: AAAGTAAAGGCGGTGTGATTCCAATTGTAGCCATCAGGGCTCTTTCAGATTTGCTAGTGTGGCTTTTGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR GCA 72 bp | TGTCAGCACAAACCAGTCAATACAATAAGGGACAAGTaGCAGCTTACAGGAAGCATTATCTGCAGGCATACA | + |
|
Preference number: 3 (lower is better) Translates to: CQHKPVNTIRDK*QLTGSIICRHT Trigger: TGTATGCCTGCAGATAATGCTTCCTGTAAGCTGGCACTTGTCCCTTATTGTATTGACTGGTTTGTGCTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR CCA 72 bp | AATTATTTCTTCTCAGCGCAAAGACATTCTTCAGTATaGTCCTATAGAGAATTTCACTCGCTGGTATGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: NYFFSAQRHSSV*SYREFHSLVCK Trigger: CTTACATACCAGCGAGTGAAATTCTCTATAGGACCATACTGAAGAATGTCTTTGCGCTGAGAAGAAATAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR TCA 90 bp | CACACTTGGGGAGTCTCAGCACACACCATGAGAGAGAATGAAGTGGCAAGTTGCGCAGCAGCCACAGGATaGGCGCTCCAGCTAGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTWGVSAHTMRENEVASCAAATG*ALQLDP Trigger: GGGGTCTAGCTGGAGCGCTCATCCTGTGGCTGCTGC...GCAACTTGCCACTTCATTCTCTCTCATGGTGTGTGCTGAGACTCCCCAAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200941.2 |
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| 3UTR CAA 72 bp | GGGGAGTCTCCATTCTCCTCCATGAGATCCTGGGCTTaGATTTCTTGCCGCTTCAGAGTCGGCCCTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GESPFSSMRSWA*ISCRFRVGPGV Trigger: CACTCCAGGGCCGACTCTGAAGCGGCAAGAAATCAAAGCCCAGGATCTCATGGAGGAGAATGGAGACTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| CDS-3UTR TCA 90 bp | CCTCTGAATAGGCTTTCAGCCACTAAGACAAAGGCGTACTTGCTAATGTCTCGCGCAGCAGCCACAGGATaGGCGCTCCAGCTAGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLNRLSATKTKAYLLMSRAAATG*ALQLDP Trigger: GGGGTCTAGCTGGAGCGCTCATCCTGTGGCTGCTGC...GCGAGACATTAGCAAGTACGCCTTTGTCTTAGTGGCTGAAAGCCTATTCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR CAA 72 bp | CTGGAGGGCAGCTTTGCGGCCACACTGCCAGCTACTTaGACAGCTGTTTCTTGTCCTTTGGGGAGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LEGSFAATLPAT*TAVSCPLGSLH Trigger: ATGGAGACTCCCCAAAGGACAAGAAACAGCTGTCAAAGTAGCTGGCAGTGTGGCCGCAAAGCTGCCCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| CDS-3UTR GCA 90 bp | CACCTCAGCATCTCACACCTCAATCCCTCATGCTCTGCTTCCTGGGTGACCACCCTGGTCCTGACTGACTaGTTTAGCTCTGTCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLSISHLNPSCSASWVTTLVLTD*FSSVHK Trigger: CTTGTGGACAGAGCTAAAGCAGTCAGTCAGGACCAG...GGTGGTCACCCAGGAAGCAGAGCATGAGGGATTGAGGTGTGAGATGCTGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| 3UTR CAA 72 bp | TCCATTCTCCTCCATGAGATCCTGGGCTTTGATTTCTaGCCGCTTCAGAGTCGGCCCTGGAGTGTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SILLHEILGFDF*PLQSRPWSVCL Trigger: CAGACACACACTCCAGGGCCGACTCTGAAGCGGCAAGAAATCAAAGCCCAGGATCTCATGGAGGAGAATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| CDS-3UTR GCA 90 bp | CACCTCAGCATCTCACACCTCAATCCCTCATGCTCTGCTTCCTGGGTGACCACCATGGTCTCCAGTCACTaGAATGAACTGCACATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSISHLNPSCSASWVTTMVSSH*NELHIG Trigger: ACCGATGTGCAGTTCATTGCAGTGACTGGAGACCAT...GGTGGTCACCCAGGAAGCAGAGCATGAGGGATTGAGGTGTGAGATGCTGAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR CCA 90 bp | GGCAAGTTGCAAAGTCTCCCACAGTCCAGACCATGTTGGCAGGTATCCAAAGTTACTTGGCTCCTGCTTTaGAGACCAGCTCCCGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: GKLQSLPQSRPCWQVSKVTWLLL*RPAPDR Trigger: CCGATCGGGAGCTGGTCTCCAAAGCAGGAGCCAAGT...AACTTTGGATACCTGCCAACATGGTCTGGACTGTGGGAGACTTTGCAACTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200941.2 ENSMUST00000202332.2 |
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| CDS-3UTR TCA 90 bp | GGAATAAAAACTAACAGGAAGTCTAGAGTTTCACTCCGATCCTTACTGGTCACAGCAGCAGCCACAGGATaGGCGCTCCAGCTAGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GIKTNRKSRVSLRSLLVTAAATG*ALQLDP Trigger: GGGGTCTAGCTGGAGCGCTCATCCTGTGGCTGCTGC...TGTGACCAGTAAGGATCGGAGTGAAACTCTAGACTTCCTGTTAGTTTTTATTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| CDS-3UTR CCA 90 bp | ATGAGAGAGAATGAAGTGGCAAGTTGCAAAGTCTCCCACAGTCCAGACCATGTTACTTGGCTCCTGCTTTaGAGACCAGCTCCCGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: MRENEVASCKVSHSPDHVTWLLL*RPAPDR Trigger: CCGATCGGGAGCTGGTCTCCAAAGCAGGAGCCAAGT...AACATGGTCTGGACTGTGGGAGACTTTGCAACTTGCCACTTCATTCTCTCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200941.2 ENSMUST00000202332.2 |
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| CDS-3UTR TCA 90 bp | TACCTCAGGTGTACTACCCAAGATGCAACTACCCAGGATGATCAATTCCTCAAGGGCAGGAAGACAGAATaGGACCAGAGCCCGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLRCTTQDATTQDDQFLKGRKTE*DQSPSL Trigger: CAAAGACGGGCTCTGGTCTCATTCTGTCTTCCTGCC...CTTGAGGAATTGATCATCCTGGGTAGTTGCATCTTGGGTAGTACACCTGAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR GCA 90 bp | AGTCCTGATGTGTCAGCACAAACCAGTCAATACAATAAGGGACAAGTGCCAGCTCTCCCCCAAGATGAGTaGCTAGACACCACTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPDVSAQTSQYNKGQVPALPQDE*LDTTSQ Trigger: CTGGGAAGTGGTGTCTAGGCACTCATCTTGGGGGAG...AGCTGGCACTTGTCCCTTATTGTATTGACTGGTTTGTGCTGACACATCAGGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR GCA 90 bp | CCTCTGAATAGGCTTTCAGCCACTAAGACAAAGGCGTACTTGCTAATGTCTCGCCTCCACCACTGTGTCTaGAGGCAGGAAGACAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: PLNRLSATKTKAYLLMSRLHHCV*RQEDRM Trigger: CATTCTGTCTTCCTGCCTGCAGACACAGTGGTGGAG...GCGAGACATTAGCAAGTACGCCTTTGTCTTAGTGGCTGAAAGCCTATTCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
||
| 3UTR CAA 72 bp | ACTTTAAGCTATGCAGTGCGCTCTAAAGCCTTAGCCTaGTCCACATTCTGCTGCAGCCTCTTGGATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSYAVRSKALA*STFCCSLLDAL Trigger: CAGAGCATCCAAGAGGCTGCAGCAGAATGTGGACAAGGCTAAGGCTTTAGAGCGCACTGCATAGCTTAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR CAA 72 bp | CTCTACCTTGTACCCGTGCAGTTGCTTAGTTGCTCCTaGCCCATATGTAGTCCATACCTCAGGTGTACTACC | + |
|
Preference number: 4 (lower is better) Translates to: LYLVPVQLLSCS*PICSPYLRCTT Trigger: GGTAGTACACCTGAGGTATGGACTACATATGGGCAAGGAGCAACTAAGCAACTGCACGGGTACAAGGTAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050952.4 ENSMUST00000202332.2 |
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| 3UTR CAA 72 bp | TGCAGCCGCTGTGCTTCCGGCAGGTTACCAAGATCTTaGCTCTCAGAAATCAAATGTCCGTTGCTTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CSRCASGRLPRS*LSEIKCPLLSR Trigger: TCGAGAAAGCAACGGACATTTGATTTCTGAGAGCAAAGATCTTGGTAACCTGCCGGAAGCACAGCGGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| 3UTR CAA 72 bp | TGTGGTGTAGTGCACCTGGAACTGGATGCTGACCTGTaGAGGTTTCAGAGATGCCACTTTCCCATCTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CGVVHLELDADL*RFQRCHFPIYF Trigger: GAAGTAGATGGGAAAGTGGCATCTCTGAAACCTCAACAGGTCAGCATCCAGTTCCAGGTGCACTACACCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202332.2 |
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| CDS-3UTR GCA 90 bp | CATACCTCAGGTGTACTACCCAAGATGCAACTACCCAGGATGATCAATTCCTCATTCTCGAAGATGCTCTaGTTTGGAGACCAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HTSGVLPKMQLPRMINSSFSKML*FGDQLP Trigger: CGGGAGCTGGTCTCCAAAGCAGAGCATCTTCGAGAA...TGAGGAATTGATCATCCTGGGTAGTTGCATCTTGGGTAGTACACCTGAGGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR CCA 90 bp | CCTCTGAATAGGCTTTCAGCCACTAAGACAAAGGCGTACTTGCTAATGTCTCGCCCTGGAGTGTGTGTCTaGAATCTTCCCAACAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLNRLSATKTKAYLLMSRPGVCV*NLPNRN Trigger: GTTCCTGTTGGGAAGATTCCAGACACACACTCCAGG...GCGAGACATTAGCAAGTACGCCTTTGTCTTAGTGGCTGAAAGCCTATTCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR TCA 90 bp | AGTCCTGATGTGTCAGCACAAACCAGTCAATACAATAAGGGACAAGTGCCAGCTTGGATGCTGACCTGTTaGGGTTTCAGAGATGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SPDVSAQTSQYNKGQVPAWMLTC*GFRDAT Trigger: AGTGGCATCTCTGAAACCTCAACAGGTCAGCATCCA...AGCTGGCACTTGTCCCTTATTGTATTGACTGGTTTGTGCTGACACATCAGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR GCA 90 bp | AGTCCTGATGTGTCAGCACAAACCAGTCAATACAATAAGGGACAAGTGCCAGCTTTGCTTTCTCGAAGATaGTCTGCTTTGGAGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPDVSAQTSQYNKGQVPALLSRR*SALETS Trigger: GCTGGTCTCCAAAGCAGAGCATCTTCGAGAAAGCAA...AGCTGGCACTTGTCCCTTATTGTATTGACTGGTTTGTGCTGACACATCAGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR TCA 90 bp | ATTCTTCAGTATGGTCCTATAGAGAATTTCACTCGCTGGTATGTAAGGAGAGTGCAAACTCTCTGGCATTaGCCCAGTCTGCTCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: ILQYGPIENFTRWYVRRVQTLWH*PSLLQH Trigger: ATGTTGGAGCAGACTGGGTCAATGCCAGAGAGTTTG...CACTCTCCTTACATACCAGCGAGTGAAATTCTCTATAGGACCATACTGAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR CCA 90 bp | GGAATAAAAACTAACAGGAAGTCTAGAGTTTCACTCCGATCCTTACTGGTCACATCCTCCATGAGATCCTaGGCTTTGATTTCTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GIKTNRKSRVSLRSLLVTSSMRS*ALISCR Trigger: GCGGCAAGAAATCAAAGCCCAGGATCTCATGGAGGA...TGTGACCAGTAAGGATCGGAGTGAAACTCTAGACTTCCTGTTAGTTTTTATTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR GCA 90 bp | CTGGTCACAGTTCCGTATGATGTAAACAGTGTTGCTTTAGCTGTGTTTGATGGGTTGAGGTTTCAGAGATaGCACTTTCCCATCTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVTVPYDVNSVALAVFDGLRFQR*HFPIYF Trigger: GAAGTAGATGGGAAAGTGGCATCTCTGAAACCTCAA...CCCATCAAACACAGCTAAAGCAACACTGTTTACATCATACGGAACTGTGACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR CCA 90 bp | ATCAATTCCTCAAGTCCTGATGTGTCAGCACAAACCAGTCAATACAATAAGGGACTGTTTCTTGTCCTTTaGGGAGTCTCCATTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: INSSSPDVSAQTSQYNKGLFLVL*GVSILL Trigger: GAGGAGAATGGAGACTCCCCAAAGGACAAGAAACAG...TCCCTTATTGTATTGACTGGTTTGTGCTGACACATCAGGACTTGAGGAATTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR GCA 90 bp | CTGGTATGTAAGGAGAGTGAAGAGTTAACAGATGGAAAAGATGCCTCTGGGGCAGGTTACCAAGATCTTTaGTCTCAGAAATCAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVCKESEELTDGKDASGAGYQDL*SQKSNV Trigger: GACATTTGATTTCTGAGAGCAAAGATCTTGGTAACC...TGCCCCAGAGGCATCTTTTCCATCTGTTAACTCTTCACTCTCCTTACATACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS GCA 90 bp | TGGAGACCAGCTCCCGATCGGAAGGTTCAGGGCTCAGGCCGCCACTaGCACCACCACCCGGACCGTCTCCCGGGGCCGCAGCCTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WRPAPDRKVQGSGRH*HHHPDRLPGPQPPQ Trigger: CTGGGGAGGCTGCGGCCCCGGGAGACGGTCCGGGTGGTGGTGGCAGTGGCGGCCTGAGCCCTGAACCTTCCGATCGGGAGCTGGTCTCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050952.4 ENSMUST00000200941.2 ENSMUST00000202332.2 |
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| CDS-3UTR CAA 90 bp | CACCTCAGCATCTCACACCTCAATCCCTCATGCTCTGCTTCCTGGGTGACCACCACACTGCCAGCTACTTaGACAGCTGTTTCTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HLSISHLNPSCSASWVTTTLPAT*TAVSCP Trigger: AGGACAAGAAACAGCTGTCAAAGTAGCTGGCAGTGT...GGTGGTCACCCAGGAAGCAGAGCATGAGGGATTGAGGTGTGAGATGCTGAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR CAA 90 bp | GATGGTCCAACCAGGGCACTGTGGGTAAAGGAGGGATGTACCAGACTCAGACCTTTTGACAGCTGTTTCTaGTCCTTTGGGGAGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DGPTRALWVKEGCTRLRPFDSCF*SFGESP Trigger: TGGAGACTCCCCAAAGGACAAGAAACAGCTGTCAAA...AGGTCTGAGTCTGGTACATCCCTCCTTTACCCACAGTGCCCTGGTTGGACCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR CAA 90 bp | TACCTCAGGTGTACTACCCAAGATGCAACTACCCAGGATGATCAATTCCTCAAGCTGGGCTTTGATTTCTaGCCGCTTCAGAGTCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YLRCTTQDATTQDDQFLKLGFDF*PLQSRP Trigger: GGGCCGACTCTGAAGCGGCAAGAAATCAAAGCCCAG...CTTGAGGAATTGATCATCCTGGGTAGTTGCATCTTGGGTAGTACACCTGAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTCACAGTTCCGTATGATGTAAACAGTGTTGCTTTAGCTGTGTTTGATGGGGTCTGCAGGAATCTATaGCTGCATTCTTCCCAACGA | + |
|
Preference number: 5 (lower is better) Translates to: LVTVPYDVNSVALAVFDGVCRNL*LHSSQR Trigger: TCGTTGGGAAGAATGCAGCAATAGATTCCTGCAGAC...CCCATCAAACACAGCTAAAGCAACACTGTTTACATCATACGGAACTGTGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS-3UTR CAA 90 bp | GGAATAAAAACTAACAGGAAGTCTAGAGTTTCACTCCGATCCTTACTGGTCACAAGGTTACCAAGATCTTaGCTCTCAGAAATCAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: GIKTNRKSRVSLRSLLVTRLPRS*LSEIKC Trigger: ACATTTGATTTCTGAGAGCAAAGATCTTGGTAACCT...TGTGACCAGTAAGGATCGGAGTGAAACTCTAGACTTCCTGTTAGTTTTTATTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050952.4 |
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| CDS GCA 72 bp | GCTCCCGATCGGAAGGTTCAGGGCTCAGGCCGCCACTaGCACCACCACCCGGACCGTCTCCCGGGGCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: APDRKVQGSGRH*HHHPDRLPGPQ Trigger: CTGCGGCCCCGGGAGACGGTCCGGGTGGTGGTGGCAGTGGCGGCCTGAGCCCTGAACCTTCCGATCGGGAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050952.4 ENSMUST00000200941.2 ENSMUST00000202332.2 |
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