Pregenerated sensors for STAU2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025920Ensembl transcript IDs: ENSMUST00000027052.13, ENSMUST00000054668.13, ENSMUST00000115359.10, ENSMUST00000127420.8, ENSMUST00000128957.9, ENSMUST00000131257.9, ENSMUST00000145092.8, ENSMUST00000159558.8, ENSMUST00000162007.8, ENSMUST00000162435.8, ENSMUST00000162627.8, ENSMUST00000162751.8
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACACAGATGGGGGTGGGCACAATTTCCACGACAGCGTAGACTCCTaGAGCGATGGGCAGAGGCAAGACGCCCCCTCGATGGCTGATGGC | + |
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Preference number: 1 (lower is better) Translates to: HTDGGGHNFHDSVDS*SDGQRQDAPSMADG Trigger: GCCATCAGCCATCGAGGGGGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTGCCCACCCCCATCTGTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR TCA 90 bp | CTATTAGTCATTCGTTTCCTAGAACACAGACACCCTCGTGCGTGCTaGCAGGTTTATACGGACGCAGTGGCAGCCGTGGGTTCTGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LLVIRFLEHRHPRAC*QVYTDAVAAVGSGS Trigger: GCTCCCAGAACCCACGGCTGCCACTGCGTCCGTATAAACCTGTCAGCACGCACGAGGGTGTCTGTGTTCTAGGAAACGAATGACTAATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR CCA 90 bp | CGAGTCCAGAGGCAGTTACTAGAGACACTCGATGTGAACAGTGAGTaGCTACAACACACAGATGGGGGTGGGCACAATTTCCACGACAGC | + |
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Preference number: 1 (lower is better) Translates to: RVQRQLLETLDVNSE*LQHTDGGGHNFHDS Trigger: GCTGTCGTGGAAATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCTCTGGACTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR TCA 90 bp | GTTCCGAGTCCAGAGGCAGTTACTAGAGACACTCGATGTGAACAGTaGGTGGCTACAACACACAGATGGGGGTGGGCACAATTTCCACGA | + |
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Preference number: 1 (lower is better) Translates to: VPSPEAVTRDTRCEQ*VATTHRWGWAQFPR Trigger: TCGTGGAAATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCTCTGGACTCGGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR GCA 90 bp | CATAATGCTATTAGTCATTCGTTTCCTAGAACACAGACACCCTCGTaGGTGCTGACAGGTTTATACGGACGCAGTGGCAGCCGTGGGTTC | + |
|
Preference number: 1 (lower is better) Translates to: HNAISHSFPRTQTPS*VLTGLYGRSGSRGF Trigger: GAACCCACGGCTGCCACTGCGTCCGTATAAACCTGTCAGCACGCACGAGGGTGTCTGTGTTCTAGGAAACGAATGACTAATAGCATTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR GCA 90 bp | TGGGAAAGAAGCTCCATTCCCAAGTCTACACTCATGACAGCTGTGTaGTGCTCTGAGATCATCATGAGACAGCTGCTGTATCAGTGGCGG | + |
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Preference number: 1 (lower is better) Translates to: WERSSIPKSTLMTAV*CSEIIMRQLLYQWR Trigger: CCGCCACTGATACAGCAGCTGTCTCATGATGATCTCAGAGCAGCACACAGCTGTCATGAGTGTAGACTTGGGAATGGAGCTTCTTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| 3UTR TCA 90 bp | GAGAGGGAGAGGGAGGGAGAAAGAGAGAGACAGAGAGTACAGATGTaGATATCAATATGGCAGAAAGCCAGGCAGCAACAGAGTTCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: EREREGERERQRVQM*ISIWQKARQQQSSW Trigger: CCAGGAACTCTGTTGCTGCCTGGCTTTCTGCCATATTGATATTCACATCTGTACTCTCTGTCTCTCTCTTTCTCCCTCCCTCTCCCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| 3UTR TCA 90 bp | AAGCTCCATTCCCAAGTCTACACTCATGACAGCTGTGTGCTGCTCTaGGATCATCATGAGACAGCTGCTGTATCAGTGGCGGTAGATGCT | + |
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Preference number: 1 (lower is better) Translates to: KLHSQVYTHDSCVLL*DHHETAAVSVAVDA Trigger: AGCATCTACCGCCACTGATACAGCAGCTGTCTCATGATGATCTCAGAGCAGCACACAGCTGTCATGAGTGTAGACTTGGGAATGGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| 3UTR GCA 90 bp | TGCATAAGGAACTCAGAAACTTCAAAACTCAGCCAAAAGCCAGAGTaGAACATGTACTGCGTGCACAGAGCCGAGCCATCACTCGCAGAC | + |
|
Preference number: 1 (lower is better) Translates to: CIRNSETSKLSQKPE*NMYCVHRAEPSLAD Trigger: GTCTGCGAGTGATGGCTCGGCTCTGTGCACGCAGTACATGTTGCACTCTGGCTTTTGGCTGAGTTTTGAAGTTTCTGAGTTCCTTATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
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| 3UTR TCA 90 bp | TTCTCCAACAGGCATTCCATTCCCCACCATGTACAGTATTTATTTTaGTCCTACTCACTGTTCCGAGTCCAGAGGCAGTTACTAGAGACA | + |
|
Preference number: 1 (lower is better) Translates to: FSNRHSIPHHVQYLF*SYSLFRVQRQLLET Trigger: TGTCTCTAGTAACTGCCTCTGGACTCGGAACAGTGAGTAGGATCAAAATAAATACTGTACATGGTGGGGAATGGAATGCCTGTTGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR TCA 90 bp | CCAGTAGTAGGATCAGATTTCTGCTGCCTCTGGGCAAGTGAGTTATaGTCTGATCTCAAGTTCCAAGGGAAATGCTCAAAGTTTTATTTT | + |
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Preference number: 1 (lower is better) Translates to: PVVGSDFCCLWASEL*SDLKFQGKCSKFYF Trigger: AAAATAAAACTTTGAGCATTTCCCTTGGAACTTGAGATCAGATCATAACTCACTTGCCCAGAGGCAGCAGAAATCTGATCCTACTACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR TCA 90 bp | TACTGCGTGCACAGAGCCGAGCCATCACTCGCAGACATTTATAAATaGGCAGTGGGTCACTTTTCATCACAGTTTATTTTAATTTATACT | + |
|
Preference number: 1 (lower is better) Translates to: YCVHRAEPSLADIYK*AVGHFSSQFILIYT Trigger: AGTATAAATTAAAATAAACTGTGATGAAAAGTGACCCACTGCTCATTTATAAATGTCTGCGAGTGATGGCTCGGCTCTGTGCACGCAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
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| 3UTR GCA 90 bp | ATTGTCAAGCATTGTTTCAAACAAGAGAGAGTAGAACAACACACTTaGCACGACAAAGCAATTGCAAGGACAGAACCAAGCCATTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: IVKHCFKQERVEQHT*HDKAIARTEPSHFK Trigger: TTTAAAATGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGCAAGTGTGTTGTTCTACTCTCTCTTGTTTGAAACAATGCTTGACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR CCA 90 bp | GTGCTGGACCTTATAAATGTACCTGTGTCATTACTAACTGCAGGATaGGAAATTCAAAACTGCTATAAAATCAAATCAACAGCAGAAAGA | + |
|
Preference number: 1 (lower is better) Translates to: VLDLINVPVSLLTAG*EIQNCYKIKSTAER Trigger: TCTTTCTGCTGTTGATTTGATTTTATAGCAGTTTTGAATTTCCCATCCTGCAGTTAGTAATGACACAGGTACATTTATAAGGTCCAGCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTGGGGAGCCAGAGTGTCCTGTGCACACGCAAGCTGCAGTCTCATCCCGTCGAACCGGAAACCAAGATaGCTCCTCCAGGTGCTCCGG | + |
|
Preference number: 2 (lower is better) Translates to: MWGARVSCAHASCSLIPSNRKPR*LLQVLR Trigger: CCGGAGCACCTGGAGGAGCCATCTTGGTTTCCGGTT...CGACGGGATGAGACTGCAGCTTGCGTGTGCACAGGACACTCTGGCTCCCCACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127420.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTGGGGAGCCAGAGTGTCCTGTGCACACGCAAGCTGCAGTCTCATCCCGTCGAGCCAAAAGCCAGAGTaGAACATGTACTGCGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: MWGARVSCAHASCSLIPSSQKPE*NMYCVH Trigger: GTGCACGCAGTACATGTTGCACTCTGGCTTTTGGCT...CGACGGGATGAGACTGCAGCTTGCGTGTGCACAGGACACTCTGGCTCCCCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
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| 3UTR-3UTR CCA 90 bp | ACACTCGATGTGAACAGTGAGTGGCTACAACACACAGATGGGGGTGGGCACAATAGACTCCTGGAGCGATaGGCAGAGGCAAGACGCCCC | + |
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Preference number: 2 (lower is better) Translates to: TLDVNSEWLQHTDGGGHNRLLER*AEARRP Trigger: GGGGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCT...ATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTGGGGAGCCAGAGTGTCCTGTGCACACGCAAGCTGCAGTCTCATCCCGTCGGCTCTGAGATCATCATaGGACAGCTGCTGTATCAGT | + |
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Preference number: 2 (lower is better) Translates to: MWGARVSCAHASCSLIPSALRSS*DSCCIS Trigger: ACTGATACAGCAGCTGTCTCATGATGATCTCAGAGC...CGACGGGATGAGACTGCAGCTTGCGTGTGCACAGGACACTCTGGCTCCCCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| 3UTR-3UTR GCA 90 bp | GCACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCACACAGACACCCTCGTaGGTGCTGACAGGTTTATAC | + |
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Preference number: 2 (lower is better) Translates to: AQFPRQRRLLERWAEARRTQTPS*VLTGLY Trigger: GTATAAACCTGTCAGCACGCACGAGGGTGTCTGTGT...GCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTGGCTACAACACACAGATGGGGGTGGGCACAATTTCCACGACAGCGTAGACTTTATACGGACGCAGTaGCAGCCGTGGGTTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: EWLQHTDGGGHNFHDSVDFIRTQ*QPWVLG Trigger: TCCCAGAACCCACGGCTGCCACTGCGTCCGTATAAA...GTCTACGCTGTCGTGGAAATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCCCCTCGATGGCTGATGGCGTTGTATGTGCAAGATaGAGGTCACAAATATCTGCA | + |
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Preference number: 2 (lower is better) Translates to: VDSWSDGQRQDAPSMADGVVCAR*RSQISA Trigger: TGCAGATATTTGTGACCTTCATCTTGCACATACAAC...GCCATCAGCCATCGAGGGGGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACCCACGACAAAGCAATTaGAAGGACAGAACCAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GHNFHDSVDSWSDGQRQDPRQSN*KDRTKP Trigger: TGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGG...GTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR CCA 90 bp | ACACTCGATGTGAACAGTGAGTGGCTACAACACACAGATGGGGGTGGGCACAATGACAGCGTAGACTCCTaGAGCGATGGGCAGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: TLDVNSEWLQHTDGGGHNDSVDS*SDGQRQ Trigger: TTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTC...ATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR CCA 90 bp | CGAGTCCAGAGGCAGTTACTAGAGACACTCGATGTGAACAGTGAGTGGCTACAAGACAGCGTAGACTCCTaGAGCGATGGGCAGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: RVQRQLLETLDVNSEWLQDSVDS*SDGQRQ Trigger: TTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTC...TTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCTCTGGACTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGCTACAACACACAGATGGGGGTGGGCACAATTTCCACGACAGCGTAGACGGATCAGATTTCTGCTaGCTCTGGGCAAGTGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: EWLQHTDGGGHNFHDSVDGSDFC*LWASEL Trigger: TAACTCACTTGCCCAGAGGCAGCAGAAATCTGATCC...GTCTACGCTGTCGTGGAAATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTGGGGAGCCAGAGTGTCCTGTGCACACGCAAGCTGCAGTCTCATCCCGTCGATGAGAAGATGGATGTaGCAATCAAGACCAACTGAA | + |
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Preference number: 2 (lower is better) Translates to: MWGARVSCAHASCSLIPSMRRWM*QSRPTE Trigger: TTCAGTTGGTCTTGATTGGCACATCCATCTTCTCAT...CGACGGGATGAGACTGCAGCTTGCGTGTGCACAGGACACTCTGGCTCCCCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| 3UTR-3UTR CCA 90 bp | CGAGTCCAGAGGCAGTTACTAGAGACACTCGATGTGAACAGTGAGTGGCTACAATTTATACGGACGCAGTaGCAGCCGTGGGTTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RVQRQLLETLDVNSEWLQFIRTQ*QPWVLG Trigger: TCCCAGAACCCACGGCTGCCACTGCGTCCGTATAAA...TTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCTCTGGACTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR TCA 90 bp | GGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACAGGCACTCGATGTGAACAGTaGGTGGCTACAACACACAGA | + |
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Preference number: 2 (lower is better) Translates to: GFQHAGPERDWLEASPTGTRCEQ*VATTHR Trigger: TCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGT...GCCTGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR GCA 90 bp | GGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACAGGCCCACGACAAAGCAATTaGAAGGACAGAACCAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GFQHAGPERDWLEASPTGPRQSN*KDRTKP Trigger: TGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGG...GCCTGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR TCA 90 bp | CACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCCATAAAAAGAGAAACTaGGACTATATGAGGACAAGC | + |
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Preference number: 2 (lower is better) Translates to: HNFHDSVDSWSDGQRQDAHKKRN*DYMRTS Trigger: GCTTGTCCTCATATAGTCTCAGTTTCTCTTTTTATG...GGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACAGCTACAACACACAGATaGGGGTGGGCACAATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: TGFQHAGPERDWLEASPTATTHR*GWAQFP Trigger: TGGAAATTGTGCCCACCCCCATCTGTGTGTTGTAGC...TGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR CCA 90 bp | GACCATTCTAACACCAGTGGACAAATGACACCATGGACGAGCGAGCACACTTCAGCACCAGTGGCAGCTTaGCCGTGTGTGTTAATTCTT | + |
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Preference number: 2 (lower is better) Translates to: DHSNTSGQMTPWTSEHTSAPVAA*PCVLIL Trigger: AAGAATTAACACACACGGCCAAGCTGCCACTGGTGC...TGAAGTGTGCTCGCTCGTCCATGGTGTCATTTGTCCACTGGTGTTAGAATGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115359.10 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGGCGGCTAATGGGGTTCATTCCTTGACCATAGTCGGGTCCAGCCTTTACCCTGATTCACCATTCTaGGGAGACTTTTCTGGAATT | + |
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Preference number: 2 (lower is better) Translates to: SQAANGVHSLTIVGSSLYPDSPF*GDFSGI Trigger: AATTCCAGAAAAGTCTCCCCAGAATGGTGAATCAGG...GTAAAGGCTGGACCCGACTATGGTCAAGGAATGAACCCCATTAGCCGCCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127420.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACACCACGACAAAGCAATTaGAAGGACAGAACCAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: TGFQHAGPERDWLEASPTPRQSN*KDRTKP Trigger: TGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGG...TGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR CCA 90 bp | CAACACACTTGCCACGACAAAGCAATTGCAAGGACAGAACCAAGCCATTTTAAATTTATACGGACGCAGTaGCAGCCGTGGGTTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: QHTCHDKAIARTEPSHFKFIRTQ*QPWVLG Trigger: TCCCAGAACCCACGGCTGCCACTGCGTCCGTATAAA...TTTAAAATGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGCAAGTGTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAACAACTCATACAGAAACGGAACAAATCTTTACTGCATTTGCCCCACACTGACAGCGTAGACTCCTaGAGCGATGGGCAGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: KEQLIQKRNKSLLHLPHTDSVDS*SDGQRQ Trigger: TTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTC...AGTGTGGGGCAAATGCAGTAAAGATTTGTTCCGTTTCTGTATGAGTTGTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162751.8 |
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| 3UTR CAA 90 bp | TTTTTGGCTATCTTTTTATTGGGTCCTGTTCCAGTCGCAACTTCATaGCCTACCTTGACCTGCATTACGAACTCTCGACGGCGAGGCATT | + |
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Preference number: 2 (lower is better) Translates to: FLAIFLLGPVPVATS*PTLTCITNSRRRGI Trigger: AATGCCTCGCCGTCGAGAGTTCGTAATGCAGGTCAAGGTAGGCAATGAAGTTGCGACTGGAACAGGACCCAATAAAAAGATAGCCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127420.8 |
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| 3UTR CAA 90 bp | CTGAAGGAACAACTCATACAGAAACGGAACAAATCTTTACTGCATTaGCCCCACACTGGATTCCAACATGCTGGTCCAGAGCGTGATTGG | + |
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Preference number: 2 (lower is better) Translates to: LKEQLIQKRNKSLLH*PHTGFQHAGPERDW Trigger: CCAATCACGCTCTGGACCAGCATGTTGGAATCCAGTGTGGGGCAAATGCAGTAAAGATTTGTTCCGTTTCTGTATGAGTTGTTCCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162751.8 |
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| 3UTR-3UTR TCA 90 bp | CGAGTCCAGAGGCAGTTACTAGAGACACTCGATGTGAACAGTGAGTGGCTACAAGTTGTATGTGCAAGATaGAGGTCACAAATATCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: RVQRQLLETLDVNSEWLQVVCAR*RSQISA Trigger: TGCAGATATTTGTGACCTTCATCTTGCACATACAAC...TTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCTCTGGACTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR-3UTR GCA 90 bp | CAACACACTTGCCACGACAAAGCAATTGCAAGGACAGAACCAAGCCATTTTAAAACACAGACACCCTCGTaGGTGCTGACAGGTTTATAC | + |
|
Preference number: 2 (lower is better) Translates to: QHTCHDKAIARTEPSHFKTQTPS*VLTGLY Trigger: GTATAAACCTGTCAGCACGCACGAGGGTGTCTGTGT...TTTAAAATGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGCAAGTGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACTCGATGTGAACAGTGAGTGGCTACAACACACAGATGGGGGTGGGCACAATTCCACAGCACATCAGTaGTTAATTTCTGAATTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: TLDVNSEWLQHTDGGGHNSTAHQ*LISELS Trigger: TGACAATTCAGAAATTAACCACTGATGTGCTGTGGA...ATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGGGAACAAGAATAAGTGGGAAAGAAGCTCCATTCCCAAGTCTACACTCATGGCTCCTTTTCCTTTCTaGCTTGCTGGATCTGAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: KGNKNKWERSSIPKSTLMAPFPF*LAGSEP Trigger: TGGCTCAGATCCAGCAAGCCAGAAAGGAAAAGGAGC...CATGAGTGTAGACTTGGGAATGGAGCTTCTTTCCCACTTATTCTTGTTCCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127420.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACACATAAAAAGAGAAACTaGGACTATATGAGGACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: TGFQHAGPERDWLEASPTHKKRN*DYMRTS Trigger: GCTTGTCCTCATATAGTCTCAGTTTCTCTTTTTATG...TGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR-3UTR GCA 90 bp | GACCATTCTAACACCAGTGGACAAATGACACCATGGACGAGCGAGCACACTTCATCCAAGTGTCCAATCTaGAAACAATTCAATACTACC | + |
|
Preference number: 2 (lower is better) Translates to: DHSNTSGQMTPWTSEHTSSKCPI*KQFNTT Trigger: GGTAGTATTGAATTGTTTGCAGATTGGACACTTGGA...TGAAGTGTGCTCGCTCGTCCATGGTGTCATTTGTCCACTGGTGTTAGAATGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115359.10 |
||
| 3UTR-3UTR CCA 90 bp | CGAGTCCAGAGGCAGTTACTAGAGACACTCGATGTGAACAGTGAGTGGCTACAATCCACAGCACATCAGTaGTTAATTTCTGAATTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: RVQRQLLETLDVNSEWLQSTAHQ*LISELS Trigger: TGACAATTCAGAAATTAACCACTGATGTGCTGTGGA...TTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCTCTGGACTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGCAACTAGGAGTCGGCACACATAAACTTCCCTTCCCACAATTAACAATTCCTATCCATTTCTTTTCCTaGTTCACCATTCTGGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RQLGVGTHKLPFPQLTIPIHFFS*FTILGR Trigger: TCTCCCCAGAATGGTGAATCAGGAAAAGAAATGGAT...AGGAATTGTTAATTGTGGGAAGGGAAGTTTATGTGTGCCGACTCCTAGTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127420.8 |
||
| 3UTR-3UTR TCA 90 bp | CAACAGAGTTCCTGGACAGTAGTGACAGAAAATAAGACATGTGCTATGAATCTCATTAGCAGGCAAGAATaGGCCTTCTGGTGGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QQSSWTVVTENKTCAMNLISRQE*AFWWTE Trigger: TTCTGTCCACCAGAAGGCTCATTCTTGCCTGCTAAT...GAGATTCATAGCACATGTCTTATTTTCTGTCACTACTGTCCAGGAACTCTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| 3UTR-3UTR GCA 90 bp | CATTTTAAAAGGCGGGAGGAAGGGACTGAAGGAACAACTCATACAGAAACGGAAAATCTTTACTGCATTTaGCCCACACTGGATTCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: HFKRREEGTEGTTHTETENLYCI*PTLDSN Trigger: GTTGGAATCCAGTGTGGGGCAAATGCAGTAAAGATT...TTCCGTTTCTGTATGAGTTGTTCCTTCAGTCCCTTCCTCCCGCCTTTTAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162751.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGTTATCAGACCTGATTTAAAACAGTTGTTTGCATACATCTTTGTGCTATGCACACAGACACCCTCGTaGGTGCTGACAGGTTTATAC | + |
|
Preference number: 2 (lower is better) Translates to: SVIRPDLKQLFAYIFVLCTQTPS*VLTGLY Trigger: GTATAAACCTGTCAGCACGCACGAGGGTGTCTGTGT...GCATAGCACAAAGATGTATGCAAACAACTGTTTTAAATCAGGTCTGATAACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTACCAAGTACATTATCTCCTGTGTTAGAATAGTGTTGTCTTCACATAAGACTACACAGACACCCTCGTaGGTGCTGACAGGTTTATAC | + |
|
Preference number: 2 (lower is better) Translates to: STKYIISCVRIVLSSHKTTQTPS*VLTGLY Trigger: GTATAAACCTGTCAGCACGCACGAGGGTGTCTGTGT...AGTCTTATGTGAAGACAACACTATTCTAACACAGGAGATAATGTACTTGGTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTTACAGCAGTATTATTTCCAAGTGTCCAATCTGCAAACAATTCAATACTACCATTACTGTCTATTCATaGAATGGAATGCTATACAGC | + |
|
Preference number: 2 (lower is better) Translates to: VYSSIISKCPICKQFNTTITVYS*NGMLYS Trigger: GCTGTATAGCATTCCATTGCATGAATAGACAGTAAT...GGTAGTATTGAATTGTTTGCAGATTGGACACTTGGAAATAATACTGCTGTAAAC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115359.10 ENSMUST00000145092.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTACAGCAGTATTATTTCCAAGTGTCCAATCTGCAAACAATTCAATACTACCTGTCTATTCATGCAATaGAATGCTATACAGCCATTA | + |
|
Preference number: 2 (lower is better) Translates to: VYSSIISKCPICKQFNTTCLFMQ*NAIQPL Trigger: TAATGGCTGTATAGCATTCCATTGCATGAATAGACA...GGTAGTATTGAATTGTTTGCAGATTGGACACTTGGAAATAATACTGCTGTAAAC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115359.10 ENSMUST00000145092.8 |
||
| 3UTR GCA 72 bp | AGACCAGAGGCCACTCTCCAGAGACTGCCTTGCGGCTaGAGGCTGTGGTCCACGTGCAGCACCCGCTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: RPEATLQRLPCG*RLWSTCSTRSL Trigger: GAGTGAGCGGGTGCTGCACGTGGACCACAGCCTGCAGCCGCAAGGCAGTCTCTGGAGAGTGGCCTCTGGTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
||
| 3UTR GCA 72 bp | GCACTCATCGCAGACCAGAGGCCACTCTCCAGAGACTaGCTTGCGGCTGCAGGCTGTGGTCCACGTGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ALIADQRPLSRD*LAAAGCGPRAA Trigger: TGCTGCACGTGGACCACAGCCTGCAGCCGCAAGGCAGTCTCTGGAGAGTGGCCTCTGGTCTGCGATGAGTGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGGGGAGCCAGAGTGTCCTGTGCACACGCAAGCTGCAGTCTCATCCCGTCGTCTCCAGAGACTGCCTaGCGGCTGCAGGCTGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: MWGARVSCAHASCSLIPSSPETA*RLQAVV Trigger: GACCACAGCCTGCAGCCGCAAGGCAGTCTCTGGAGA...CGACGGGATGAGACTGCAGCTTGCGTGTGCACAGGACACTCTGGCTCCCCACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
||
| 3UTR TCA 72 bp | AGGCTGTGGTCCACGTGCAGCACCCGCTCACTCCAGTaGCACAGCACAGCAATGTGTAACCACCACTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RLWSTCSTRSLQ*HSTAMCNHHCH Trigger: GTGACAGTGGTGGTTACACATTGCTGTGCTGTGTCACTGGAGTGAGCGGGTGCTGCACGTGGACCACAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCGCCACGACAAAGCAATaGCAAGGACAGAACCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: HNFHDSVDSWSDGQRQDAATTKQ*QGQNQA Trigger: GGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGC...GGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR TCA 72 bp | ATTCGTTTCCTAGAACACAGACACCCTCGTGCGTGCTaGCAGGTTTATACGGACGCAGTGGCAGCCGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: IRFLEHRHPRAC*QVYTDAVAAVG Trigger: ACCCACGGCTGCCACTGCGTCCGTATAAACCTGTCAGCACGCACGAGGGTGTCTGTGTTCTAGGAAACGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR CCA 72 bp | GCATTGGGCAATGATACCTGTGCAAACTTGTCTCGGTaGGAACCGGAAACCAAGATGGCTCCTCCAGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALGNDTCANLSR*EPETKMAPPGA Trigger: AGCACCTGGAGGAGCCATCTTGGTTTCCGGTTCCCACCGAGACAAGTTTGCACAGGTATCATTGCCCAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127420.8 |
||
| 3UTR CCA 72 bp | GCTGCTGTATCAGTGGCGGTAGATGCTTCTCCACCCTaGCCCAGCACACGATCCAGTACAACAGATACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: AAVSVAVDASPP*PSTRSSTTDTH Trigger: ATGAGTATCTGTTGTACTGGATCGTGTGCTGGGCCAGGGTGGAGAAGCATCTACCGCCACTGATACAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCAGTAGAACAACACACTaGCCACGACAAAGCAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: HNFHDSVDSWSDGQRQDASRTTH*PRQSNC Trigger: GCAATTGCTTTGTCGTGGCAAGTGTGTTGTTCTACT...GGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCAGTAGAACAACACACTaGCCACGACAAAGCAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: AQFPRQRRLLERWAEARRSRTTH*PRQSNC Trigger: GCAATTGCTTTGTCGTGGCAAGTGTGTTGTTCTACT...GCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR TCA 72 bp | GCCCCACACTGGATTCCAACATGCTGGTCCAGAGCGTaGTTGGCTAGAAGCTTCTCCAACAGGCATTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: APHWIPTCWSRA*LARSFSNRHSI Trigger: AATGGAATGCCTGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCCAGTGTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACAGCCACGACAAAGCAATaGCAAGGACAGAACCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TGFQHAGPERDWLEASPTATTKQ*QGQNQA Trigger: GGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGC...TGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR TCA 72 bp | TCCCAAGTCTACACTCATGACAGCTGTGTGCTGCTCTaGGATCATCATGAGACAGCTGCTGTATCAGTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: SQVYTHDSCVLL*DHHETAAVSVA Trigger: CGCCACTGATACAGCAGCTGTCTCATGATGATCTCAGAGCAGCACACAGCTGTCATGAGTGTAGACTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCCTGAATTGTCAAGCATaGTTTCAAACAAGAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HNFHDSVDSWSDGQRQDALNCQA*FQTRES Trigger: ACTCTCTCTTGTTTGAAACAATGCTTGACAATTCAG...GGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR CCA 72 bp | AGGCAGTTACTAGAGACACTCGATGTGAACAGTGAGTaGCTACAACACACAGATGGGGGTGGGCACAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: RQLLETLDVNSE*LQHTDGGGHNF Trigger: GAAATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR CCA 72 bp | AGAGACCATTCTAACACCAGTGGACAAATGACACCATaGACGAGCGAGCACACTTCACCAGCAGCTTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: RDHSNTSGQMTP*TSEHTSPAASS Trigger: TGATGAAGCTGCTGGTGAAGTGTGCTCGCTCGTCCATGGTGTCATTTGTCCACTGGTGTTAGAATGGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115359.10 |
||
| 3UTR-3UTR CAA 90 bp | ACACTCGATGTGAACAGTGAGTGGCTACAACACACAGATGGGGGTGGGCACAATAGTAGAACAACACACTaGCCACGACAAAGCAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: TLDVNSEWLQHTDGGGHNSRTTH*PRQSNC Trigger: GCAATTGCTTTGTCGTGGCAAGTGTGTTGTTCTACT...ATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR GCA 72 bp | AGCTCCATTCCCAAGTCTACACTCATGACAGCTGTGTaGTGCTCTGAGATCATCATGAGACAGCTGCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SSIPKSTLMTAV*CSEIIMRQLLY Trigger: ATACAGCAGCTGTCTCATGATGATCTCAGAGCAGCACACAGCTGTCATGAGTGTAGACTTGGGAATGGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| 3UTR GCA 72 bp | AACTCAGAAACTTCAAAACTCAGCCAAAAGCCAGAGTaGAACATGTACTGCGTGCACAGAGCCGAGCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: NSETSKLSQKPE*NMYCVHRAEPS Trigger: TGATGGCTCGGCTCTGTGCACGCAGTACATGTTGCACTCTGGCTTTTGGCTGAGTTTTGAAGTTTCTGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGAATCTTGGTTGTGCAAAACAAAATGAGAAGATGGATGTGCCAATCAAGACCGCTTTCATCGCAGCATaGTGTCTGGCAGCTTGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: ENLGCAKQNEKMDVPIKTAFIAA*CLAACR Trigger: TCGACAAGCTGCCAGACACAATGCTGCGATGAAAGC...GGTCTTGATTGGCACATCCATCTTCTCATTTTGTTTTGCACAACCAAGATTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127420.8 |
||
| 3UTR TCA 72 bp | GGATCAGATTTCTGCTGCCTCTGGGCAAGTGAGTTATaGTCTGATCTCAAGTTCCAAGGGAAATGCTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GSDFCCLWASEL*SDLKFQGKCSK Trigger: CTTTGAGCATTTCCCTTGGAACTTGAGATCAGATCATAACTCACTTGCCCAGAGGCAGCAGAAATCTGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR GCA 72 bp | AACTCATACAGAAACGGAACAAATCTTTACTGCATTTaGCCCACACTGGATTCCAACATGCTGGTCCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: NSYRNGTNLYCI*PTLDSNMLVQS Trigger: GCTCTGGACCAGCATGTTGGAATCCAGTGTGGGGCAAATGCAGTAAAGATTTGTTCCGTTTCTGTATGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162751.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACACTGAATTGTCAAGCATaGTTTCAAACAAGAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TGFQHAGPERDWLEASPTLNCQA*FQTRES Trigger: ACTCTCTCTTGTTTGAAACAATGCTTGACAATTCAG...TGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR GCA 72 bp | CATTATACCTCCAACATCCACAAAGTGTTCCACTACTaGTCAGTGCCATGTTTAATGCCCCCTAAGGTAACA | + |
|
Preference number: 3 (lower is better) Translates to: HYTSNIHKVFHY*SVPCLMPPKVT Trigger: TGTTACCTTAGGGGGCATTAAACATGGCACTGAGCAGTAGTGGAACACTTTGTGGATGTTGGAGGTATAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| 3UTR TCA 72 bp | TGTCTCCTGGGAGAATCTTGGTTGTGCAAAACAAAATaGGAAGATGGATGTGCCAATCAAGACCAACTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CLLGESWLCKTK*EDGCANQDQLK Trigger: TTTCAGTTGGTCTTGATTGGCACATCCATCTTCTCATTTTGTTTTGCACAACCAAGATTCTCCCAGGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| 3UTR TCA 72 bp | CACAGAGCCGAGCCATCACTCGCAGACATTTATAAATaGGCAGTGGGTCACTTTTCATCACAGTTTATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: HRAEPSLADIYK*AVGHFSSQFIL Trigger: TAAAATAAACTGTGATGAAAAGTGACCCACTGCTCATTTATAAATGTCTGCGAGTGATGGCTCGGCTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAACAACTCATACAGAAACGGAACAAATCTTTACTGCATTTGCCCCACACTCTGAATTGTCAAGCATaGTTTCAAACAAGAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: KEQLIQKRNKSLLHLPHTLNCQA*FQTRES Trigger: ACTCTCTCTTGTTTGAAACAATGCTTGACAATTCAG...AGTGTGGGGCAAATGCAGTAAAGATTTGTTCCGTTTCTGTATGAGTTGTTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162751.8 |
||
| 3UTR CAA 72 bp | TCATCGCAGACCAGAGGCCACTCTCCAGAGACTGCCTaGCGGCTGCAGGCTGTGGTCCACGTGCAGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSQTRGHSPETA*RLQAVVHVQHP Trigger: CGGGTGCTGCACGTGGACCACAGCCTGCAGCCGCAAGGCAGTCTCTGGAGAGTGGCCTCTGGTCTGCGATGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
||
| CDS-3UTR TCA 90 bp | GTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCCCCTCGATGGCTGATGGCGATTTCTTGCAGTCCTaGGAGATGGAGGCCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VDSWSDGQRQDAPSMADGDFLQS*EMEAGF Trigger: GAAGCCGGCCTCCATCTCTCAGGACTGCAAGAAATC...GCCATCAGCCATCGAGGGGGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | GTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCCCCTCGATGGCTGATGGCTCGCAGCATTGTGTCTaGCAGCTTGTCGAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VDSWSDGQRQDAPSMADGSQHCV*QLVESS Trigger: GGAAGACTCGACAAGCTGCCAGACACAATGCTGCGA...GCCATCAGCCATCGAGGGGGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | GTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCCCCTCGATGGCTGATGGCCTTCATTGCCTACCTTaGCCTGCATTACGAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VDSWSDGQRQDAPSMADGLHCLP*PALRTL Trigger: GAGAGTTCGTAATGCAGGTCAAGGTAGGCAATGAAG...GCCATCAGCCATCGAGGGGGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACACCCTCGTGCGTGCTGACAGGTTTATACGGACGCAGTGGCAGCCGTGGCTAGTGGCCTGTAGATaGCAGGCTCTCCCCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TDTLVRADRFIRTQWQPWLVACR*QALPFS Trigger: TGAAAAGGGGAGAGCCTGCCATCTACAGGCCACTAG...CCACGGCTGCCACTGCGTCCGTATAAACCTGTCAGCACGCACGAGGGTGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | GCACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCGAGGCCGGCTTCGCCTaGTTATTGTCTGCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AQFPRQRRLLERWAEARREAGFA*LLSAFS Trigger: GGAGAAAGCAGACAATAACCAGGCGAAGCCGGCCTC...GCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGAACACAGACACCCTCGTGCGTGCTGACAGGTTTATACGGACGCAGTGGCGATTTCTTGCAGTCCTaGGAGATGGAGGCCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRTQTPSCVLTGLYGRSGDFLQS*EMEAGF Trigger: GAAGCCGGCCTCCATCTCTCAGGACTGCAAGAAATC...GCCACTGCGTCCGTATAAACCTGTCAGCACGCACGAGGGTGTCTGTGTTCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR GCA 90 bp | GTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCCCCTCGATGGCTGATGGCGCTTTCTCCCGCAGATaGTTGGCTTGTTTTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VDSWSDGQRQDAPSMADGAFSRR*LACFSR Trigger: TCTTGAAAAACAAGCCAAGCATCTGCGGGAGAAAGC...GCCATCAGCCATCGAGGGGGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR GCA 90 bp | GTGCGTGCTGACAGGTTTATACGGACGCAGTGGCAGCCGTGGGTTCTGGGAGCTCGCCTGGTTATTGTCTaGTTTCTCCCGCAGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRADRFIRTQWQPWVLGARLVIV*FLPQML Trigger: AAGCATCTGCGGGAGAAAGCAGACAATAACCAGGCG...AGCTCCCAGAACCCACGGCTGCCACTGCGTCCGTATAAACCTGTCAGCACGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | GTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCCCCTCGATGGCTGATGGCTCTCCCGCAGATGCTTaGCTTGTTTTTCAAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VDSWSDGQRQDAPSMADGSPADA*LVFQEN Trigger: GTTCTCTTGAAAAACAAGCCAAGCATCTGCGGGAGA...GCCATCAGCCATCGAGGGGGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | GTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCCCCTCGATGGCTGATGGCAGAAAATTCTCCCACTaGCACCCGAGTTACAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VDSWSDGQRQDAPSMADGRKFSH*HPSYKT Trigger: AGTTTTGTAACTCGGGTGTCAGTGGGAGAATTTTCT...GCCATCAGCCATCGAGGGGGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | ACAGACACCCTCGTGCGTGCTGACAGGTTTATACGGACGCAGTGGCAGCCGTGGCTAGATGGCCGACTTTaGTTTCTTGCAGTCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TDTLVRADRFIRTQWQPWLDGRL*FLAVLR Trigger: TCTCAGGACTGCAAGAAATCAAAGTCGGCCATCTAG...CCACGGCTGCCACTGCGTCCGTATAAACCTGTCAGCACGCACGAGGGTGTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | CATCATGAGACAGCTGCTGTATCAGTGGCGGTAGATGCTTCTCCACCCTGGCCCTCGCAGCATTGTGTCTaGCAGCTTGTCGAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HHETAAVSVAVDASPPWPSQHCV*QLVESS Trigger: GGAAGACTCGACAAGCTGCCAGACACAATGCTGCGA...GGGCCAGGGTGGAGAAGCATCTACCGCCACTGATACAGCAGCTGTCTCATGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR CCA 90 bp | GTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCCCCTCGATGGCTGATGGCCCTGATTCACCATTCTaGGGAGACTTTTCTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: VDSWSDGQRQDAPSMADGPDSPF*GDFSGI Trigger: AATTCCAGAAAAGTCTCCCCAGAATGGTGAATCAGG...GCCATCAGCCATCGAGGGGGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | GGGCACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCTCCTTTTCCTTTCTaGCTTGCTGGATCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GHNFHDSVDSWSDGQRQDAPFPF*LAGSEP Trigger: TGGCTCAGATCCAGCAAGCCAGAAAGGAAAAGGAGC...GTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | CACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCGCTCCTTTTCCTTTCTaGCTTGCTGGATCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HNFHDSVDSWSDGQRQDAAPFPF*LAGSEP Trigger: TGGCTCAGATCCAGCAAGCCAGAAAGGAAAAGGAGC...GGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGGCTACAACACACAGATGGGGGTGGGCACAATTTCCACGACAGCGTAGACGAGGCCGGCTTCGCCTaGTTATTGTCTGCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EWLQHTDGGGHNFHDSVDEAGFA*LLSAFS Trigger: GGAGAAAGCAGACAATAACCAGGCGAAGCCGGCCTC...GTCTACGCTGTCGTGGAAATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | GCACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCACTGCCCCATCAATTaGTTCCAGTCCTTGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQFPRQRRLLERWAEARRHCPIN*FQSLFR Trigger: TCTGAACAAGGACTGGAATCAATTGATGGGGCAGTG...GCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | CACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCCTAGATGGCCGACTTTaGTTTCTTGCAGTCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNFHDSVDSWSDGQRQDALDGRL*FLAVLR Trigger: TCTCAGGACTGCAAGAAATCAAAGTCGGCCATCTAG...GGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR GCA 90 bp | CACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCTCGCCAAGACTCAGCTaGACCGAAAACATCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: HNFHDSVDSWSDGQRQDASPRLS*TENIFE Trigger: TTCGAAGATGTTTTCGGTGCAGCTGAGTCTTGGCGA...GGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054668.13 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGAGCCAGAGTGTCCTGTGCACACGCAAGCTGCAGTCTCATCCCGTCGGCCTGATTCACCATTCTaGGGAGACTTTTCTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: CGEPECPVHTQAAVSSRRPDSPF*GDFSGI Trigger: AATTCCAGAAAAGTCTCCCCAGAATGGTGAATCAGG...CCGACGGGATGAGACTGCAGCTTGCGTGTGCACAGGACACTCTGGCTCCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGAACACAGACACCCTCGTGCGTGCTGACAGGTTTATACGGACGCAGTGGCCTTCATTGCCTACCTTaGCCTGCATTACGAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRTQTPSCVLTGLYGRSGLHCLP*PALRTL Trigger: GAGAGTTCGTAATGCAGGTCAAGGTAGGCAATGAAG...GCCACTGCGTCCGTATAAACCTGTCAGCACGCACGAGGGTGTCTGTGTTCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR GCA 90 bp | GGGCACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCTTTCTCCCGCAGATaGTTGGCTTGTTTTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHNFHDSVDSWSDGQRQDAFSRR*LACFSR Trigger: TCTTGAAAAACAAGCCAAGCATCTGCGGGAGAAAGC...GTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR GCA 90 bp | CACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCGCTTTCTCCCGCAGATaGTTGGCTTGTTTTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNFHDSVDSWSDGQRQDAAFSRR*LACFSR Trigger: TCTTGAAAAACAAGCCAAGCATCTGCGGGAGAAAGC...GGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGGCTACAACACACAGATGGGGGTGGGCACAATTTCCACGACAGCGTAGACCGCCTGGTTATTGTCTaGTTTCTCCCGCAGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EWLQHTDGGGHNFHDSVDRLVIV*FLPQML Trigger: AAGCATCTGCGGGAGAAAGCAGACAATAACCAGGCG...GTCTACGCTGTCGTGGAAATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACACCCTCGTGCGTGCTGACAGGTTTATACGGACGCAGTGGCAGCCGTGGCCTGATTCACCATTCTaGGGAGACTTTTCTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: TDTLVRADRFIRTQWQPWPDSPF*GDFSGI Trigger: AATTCCAGAAAAGTCTCCCCAGAATGGTGAATCAGG...CCACGGCTGCCACTGCGTCCGTATAAACCTGTCAGCACGCACGAGGGTGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | GTGCGTGCTGACAGGTTTATACGGACGCAGTGGCAGCCGTGGGTTCTGGGAGCTCCTGATTCACCATTCTaGGGAGACTTTTCTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: VRADRFIRTQWQPWVLGAPDSPF*GDFSGI Trigger: AATTCCAGAAAAGTCTCCCCAGAATGGTGAATCAGG...AGCTCCCAGAACCCACGGCTGCCACTGCGTCCGTATAAACCTGTCAGCACGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | GCACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCTCTCCCGCAGATGCTTaGCTTGTTTTTCAAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AQFPRQRRLLERWAEARRSPADA*LVFQEN Trigger: GTTCTCTTGAAAAACAAGCCAAGCATCTGCGGGAGA...GCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | CACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACGCCTCTCCCGCAGATGCTTaGCTTGTTTTTCAAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HNFHDSVDSWSDGQRQDASPADA*LVFQEN Trigger: GTTCTCTTGAAAAACAAGCCAAGCATCTGCGGGAGA...GGCGTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | GGGCACAATTTCCACGACAGCGTAGACTCCTGGAGCGATGGGCAGAGGCAAGACTCTCCCGCAGATGCTTaGCTTGTTTTTCAAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GHNFHDSVDSWSDGQRQDSPADA*LVFQEN Trigger: GTTCTCTTGAAAAACAAGCCAAGCATCTGCGGGAGA...GTCTTGCCTCTGCCCATCGCTCCAGGAGTCTACGCTGTCGTGGAAATTGTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | ACACTCGATGTGAACAGTGAGTGGCTACAACACACAGATGGGGGTGGGCACAATGAGGCCGGCTTCGCCTaGTTATTGTCTGCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLDVNSEWLQHTDGGGHNEAGFA*LLSAFS Trigger: GGAGAAAGCAGACAATAACCAGGCGAAGCCGGCCTC...ATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| 3UTR CAA 72 bp | CCTGTGCACACGCAAGCTGCAGTCTCATCCCGTCGGTaGACAGTTATGCTTCAGTACTTGGCTTTCAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVHTQAAVSSRR*TVMLQYLAFKA Trigger: TGCCTTGAAAGCCAAGTACTGAAGCATAACTGTCAACCGACGGGATGAGACTGCAGCTTGCGTGTGCACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGGCTACAACACACAGATGGGGGTGGGCACAATTTCCACGACAGCGTAGACCACTGCCCCATCAATTaGTTCCAGTCCTTGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EWLQHTDGGGHNFHDSVDHCPIN*FQSLFR Trigger: TCTGAACAAGGACTGGAATCAATTGATGGGGCAGTG...GTCTACGCTGTCGTGGAAATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | CGAGTCCAGAGGCAGTTACTAGAGACACTCGATGTGAACAGTGAGTGGCTACAAGATTTCTTGCAGTCCTaGGAGATGGAGGCCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVQRQLLETLDVNSEWLQDFLQS*EMEAGF Trigger: GAAGCCGGCCTCCATCTCTCAGGACTGCAAGAAATC...TTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCTCTGGACTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGGCTACAACACACAGATGGGGGTGGGCACAATTTCCACGACAGCGTAGACCTAGATGGCCGACTTTaGTTTCTTGCAGTCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EWLQHTDGGGHNFHDSVDLDGRL*FLAVLR Trigger: TCTCAGGACTGCAAGAAATCAAAGTCGGCCATCTAG...GTCTACGCTGTCGTGGAAATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR GCA 90 bp | GGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACAGGCCGCCTGGTTATTGTCTaGTTTCTCCCGCAGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFQHAGPERDWLEASPTGRLVIV*FLPQML Trigger: AAGCATCTGCGGGAGAAAGCAGACAATAACCAGGCG...GCCTGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | GATCATCATGAGACAGCTGCTGTATCAGTGGCGGTAGATGCTTCTCCACCCTGGGCTCCTTTTCCTTTCTaGCTTGCTGGATCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DHHETAAVSVAVDASPPWAPFPF*LAGSEP Trigger: TGGCTCAGATCCAGCAAGCCAGAAAGGAAAAGGAGC...CCAGGGTGGAGAAGCATCTACCGCCACTGATACAGCAGCTGTCTCATGATGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR CCA 90 bp | GGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACAGGCGCTCCTTTTCCTTTCTaGCTTGCTGGATCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFQHAGPERDWLEASPTGAPFPF*LAGSEP Trigger: TGGCTCAGATCCAGCAAGCCAGAAAGGAAAAGGAGC...GCCTGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | CGAGTCCAGAGGCAGTTACTAGAGACACTCGATGTGAACAGTGAGTGGCTACAAGAGGCCGGCTTCGCCTaGTTATTGTCTGCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVQRQLLETLDVNSEWLQEAGFA*LLSAFS Trigger: GGAGAAAGCAGACAATAACCAGGCGAAGCCGGCCTC...TTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCTCTGGACTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR GCA 90 bp | ACACTCGATGTGAACAGTGAGTGGCTACAACACACAGATGGGGGTGGGCACAATCGCCTGGTTATTGTCTaGTTTCTCCCGCAGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLDVNSEWLQHTDGGGHNRLVIV*FLPQML Trigger: AAGCATCTGCGGGAGAAAGCAGACAATAACCAGGCG...ATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | CGAGTCCAGAGGCAGTTACTAGAGACACTCGATGTGAACAGTGAGTGGCTACAATCGCAGCATTGTGTCTaGCAGCTTGTCGAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVQRQLLETLDVNSEWLQSQHCV*QLVESS Trigger: GGAAGACTCGACAAGCTGCCAGACACAATGCTGCGA...TTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCTCTGGACTCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACATCGCAGCATTGTGTCTaGCAGCTTGTCGAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGFQHAGPERDWLEASPTSQHCV*QLVESS Trigger: GGAAGACTCGACAAGCTGCCAGACACAATGCTGCGA...TGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCCAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | ACACTCGATGTGAACAGTGAGTGGCTACAACACACAGATGGGGGTGGGCACAATCTAGATGGCCGACTTTaGTTTCTTGCAGTCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLDVNSEWLQHTDGGGHNLDGRL*FLAVLR Trigger: TCTCAGGACTGCAAGAAATCAAAGTCGGCCATCTAG...ATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | AATCAAGACCAACTGAAAGACAGGACCCAGGAGGAAGGCAAGGATGGAGACATGGCTCCTTTTCCTTTCTaGCTTGCTGGATCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQDQLKDRTQEEGKDGDMAPFPF*LAGSEP Trigger: TGGCTCAGATCCAGCAAGCCAGAAAGGAAAAGGAGC...CATGTCTCCATCCTTGCCTTCCTCCTGGGTCCTGTCTTTCAGTTGGTCTTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACAGCTCCTTTTCCTTTCTaGCTTGCTGGATCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGFQHAGPERDWLEASPTAPFPF*LAGSEP Trigger: TGGCTCAGATCCAGCAAGCCAGAAAGGAAAAGGAGC...TGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | GGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACAGGCATCCATTTCTTTTCCTaGTTCACCATTCTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFQHAGPERDWLEASPTGIHFFS*FTILGR Trigger: TCTCCCCAGAATGGTGAATCAGGAAAAGAAATGGAT...GCCTGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | CGAGTCCAGAGGCAGTTACTAGAGACACTCGATGTGAACAGTGAGTGGCTACAACTTCATTGCCTACCTTaGCCTGCATTACGAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVQRQLLETLDVNSEWLQLHCLP*PALRTL Trigger: GAGAGTTCGTAATGCAGGTCAAGGTAGGCAATGAAG...TTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCTCTGGACTCG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR GCA 90 bp | GACCATTCTAACACCAGTGGACAAATGACACCATGGACGAGCGAGCACACTTCATCGCCAAGACTCAGCTaGACCGAAAACATCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: DHSNTSGQMTPWTSEHTSSPRLS*TENIFE Trigger: TTCGAAGATGTTTTCGGTGCAGCTGAGTCTTGGCGA...TGAAGTGTGCTCGCTCGTCCATGGTGTCATTTGTCCACTGGTGTTAGAATGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115359.10 |
||
| CDS-3UTR TCA 90 bp | ACACTCGATGTGAACAGTGAGTGGCTACAACACACAGATGGGGGTGGGCACAATAGAAAATTCTCCCACTaGCACCCGAGTTACAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TLDVNSEWLQHTDGGGHNRKFSH*HPSYKT Trigger: AGTTTTGTAACTCGGGTGTCAGTGGGAGAATTTTCT...ATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | CAACACACTTGCCACGACAAAGCAATTGCAAGGACAGAACCAAGCCATTTTAAAGATTTCTTGCAGTCCTaGGAGATGGAGGCCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QHTCHDKAIARTEPSHFKDFLQS*EMEAGF Trigger: GAAGCCGGCCTCCATCTCTCAGGACTGCAAGAAATC...TTTAAAATGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGCAAGTGTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGAGAGTACAGATGTGAATATCAATATGGCAGAAAGCCAGGCAGCAACTCGCAGCATTGTGTCTaGCAGCTTGTCGAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDREYRCEYQYGRKPGSNSQHCV*QLVESS Trigger: GGAAGACTCGACAAGCTGCCAGACACAATGCTGCGA...GTTGCTGCCTGGCTTTCTGCCATATTGATATTCACATCTGTACTCTCTGTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR CCA 90 bp | CAACACACTTGCCACGACAAAGCAATTGCAAGGACAGAACCAAGCCATTTTAAAGAGGCCGGCTTCGCCTaGTTATTGTCTGCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHTCHDKAIARTEPSHFKEAGFA*LLSAFS Trigger: GGAGAAAGCAGACAATAACCAGGCGAAGCCGGCCTC...TTTAAAATGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGCAAGTGTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | AATCAAGACCAACTGAAAGACAGGACCCAGGAGGAAGGCAAGGATGGAGACATGATCCATTTCTTTTCCTaGTTCACCATTCTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NQDQLKDRTQEEGKDGDMIHFFS*FTILGR Trigger: TCTCCCCAGAATGGTGAATCAGGAAAAGAAATGGAT...CATGTCTCCATCCTTGCCTTCCTCCTGGGTCCTGTCTTTCAGTTGGTCTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| CDS-3UTR TCA 90 bp | GGCCGAGGACTAATGCATAAGGAACTCAGAAACTTCAAAACTCAGCCAAAAGCCCTTCATTGCCTACCTTaGCCTGCATTACGAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRGLMHKELRNFKTQPKALHCLP*PALRTL Trigger: GAGAGTTCGTAATGCAGGTCAAGGTAGGCAATGAAG...GGCTTTTGGCTGAGTTTTGAAGTTTCTGAGTTCCTTATGCATTAGTCCTCGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
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| CDS-3UTR GCA 90 bp | CACAAAGTGTTCCACTACTGCTCAGTGCCATGTTTAATGCCCCCTAAGGTAACATCGCCAAGACTCAGCTaGACCGAAAACATCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: HKVFHYCSVPCLMPPKVTSPRLS*TENIFE Trigger: TTCGAAGATGTTTTCGGTGCAGCTGAGTCTTGGCGA...TGTTACCTTAGGGGGCATTAAACATGGCACTGAGCAGTAGTGGAACACTTTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128957.9 |
||
| CDS-3UTR CCA 90 bp | CAACACACTTGCCACGACAAAGCAATTGCAAGGACAGAACCAAGCCATTTTAAACTAGTGGCCTGTAGATaGCAGGCTCTCCCCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QHTCHDKAIARTEPSHFKLVACR*QALPFS Trigger: TGAAAAGGGGAGAGCCTGCCATCTACAGGCCACTAG...TTTAAAATGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGCAAGTGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CCA 90 bp | AAAGGGAACAAGAATAAGTGGGAAAGAAGCTCCATTCCCAAGTCTACACTCATGCTAGTGGCCTGTAGATaGCAGGCTCTCCCCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGNKNKWERSSIPKSTLMLVACR*QALPFS Trigger: TGAAAAGGGGAGAGCCTGCCATCTACAGGCCACTAG...CATGAGTGTAGACTTGGGAATGGAGCTTCTTTCCCACTTATTCTTGTTCCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGAGAATCTTGGTTGTGCAAAACAAAATGAGAAGATGGATGTGCCAATCACTAGTGGCCTGTAGATaGCAGGCTCTCCCCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGRILVVQNKMRRWMCQSLVACR*QALPFS Trigger: TGAAAAGGGGAGAGCCTGCCATCTACAGGCCACTAG...TGATTGGCACATCCATCTTCTCATTTTGTTTTGCACAACCAAGATTCTCCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| CDS-3UTR CCA 90 bp | AGGCAACTAGGAGTCGGCACACATAAACTTCCCTTCCCACAATTAACAATTCCTGCTCCTTTTCCTTTCTaGCTTGCTGGATCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQLGVGTHKLPFPQLTIPAPFPF*LAGSEP Trigger: TGGCTCAGATCCAGCAAGCCAGAAAGGAAAAGGAGC...AGGAATTGTTAATTGTGGGAAGGGAAGTTTATGTGTGCCGACTCCTAGTTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| 3UTR CAA 72 bp | ATCTTTTTATTGGGTCCTGTTCCAGTCGCAACTTCATaGCCTACCTTGACCTGCATTACGAACTCTCGACGG | + |
|
Preference number: 4 (lower is better) Translates to: IFLLGPVPVATS*PTLTCITNSRR Trigger: CCGTCGAGAGTTCGTAATGCAGGTCAAGGTAGGCAATGAAGTTGCGACTGGAACAGGACCCAATAAAAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127420.8 |
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| CDS-3UTR CCA 90 bp | TCAAATCAACAGCAGAAAGACTCAACCGTGACTGTAAAAAGGGGAAGTGATGTACTAGTGGCCTGTAGATaGCAGGCTCTCCCCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SNQQQKDSTVTVKRGSDVLVACR*QALPFS Trigger: TGAAAAGGGGAGAGCCTGCCATCTACAGGCCACTAG...TACATCACTTCCCCTTTTTACAGTCACGGTTGAGTCTTTCTGCTGTTGATTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000127420.8 ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| CDS-3UTR CCA 90 bp | TCAAATCAACAGCAGAAAGACTCAACCGTGACTGTAAAAAGGGGAAGTGATGTATCGCAGCATTGTGTCTaGCAGCTTGTCGAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNQQQKDSTVTVKRGSDVSQHCV*QLVESS Trigger: GGAAGACTCGACAAGCTGCCAGACACAATGCTGCGA...TACATCACTTCCCCTTTTTACAGTCACGGTTGAGTCTTTCTGCTGTTGATTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| 3UTR CAA 72 bp | CAACTCATACAGAAACGGAACAAATCTTTACTGCATTaGCCCCACACTGGATTCCAACATGCTGGTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLIQKRNKSLLH*PHTGFQHAGPE Trigger: CTCTGGACCAGCATGTTGGAATCCAGTGTGGGGCAAATGCAGTAAAGATTTGTTCCGTTTCTGTATGAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162751.8 |
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| CDS-3UTR TCA 90 bp | CCCAAAGGGAACAAGAATAAGTGGGAAAGAAGCTCCATTCCCAAGTCTACACTCAGAAAATTCTCCCACTaGCACCCGAGTTACAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PKGNKNKWERSSIPKSTLRKFSH*HPSYKT Trigger: AGTTTTGTAACTCGGGTGTCAGTGGGAGAATTTTCT...GAGTGTAGACTTGGGAATGGAGCTTCTTTCCCACTTATTCTTGTTCCCTTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| CDS-3UTR TCA 90 bp | AAAGGGAACAAGAATAAGTGGGAAAGAAGCTCCATTCCCAAGTCTACACTCATGCTTCATTGCCTACCTTaGCCTGCATTACGAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGNKNKWERSSIPKSTLMLHCLP*PALRTL Trigger: GAGAGTTCGTAATGCAGGTCAAGGTAGGCAATGAAG...CATGAGTGTAGACTTGGGAATGGAGCTTCTTTCCCACTTATTCTTGTTCCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| CDS-3UTR TCA 90 bp | CAACACACTTGCCACGACAAAGCAATTGCAAGGACAGAACCAAGCCATTTTAAACTTCATTGCCTACCTTaGCCTGCATTACGAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QHTCHDKAIARTEPSHFKLHCLP*PALRTL Trigger: GAGAGTTCGTAATGCAGGTCAAGGTAGGCAATGAAG...TTTAAAATGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGCAAGTGTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | CAACACACTTGCCACGACAAAGCAATTGCAAGGACAGAACCAAGCCATTTTAAACACTGCCCCATCAATTaGTTCCAGTCCTTGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHTCHDKAIARTEPSHFKHCPIN*FQSLFR Trigger: TCTGAACAAGGACTGGAATCAATTGATGGGGCAGTG...TTTAAAATGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGCAAGTGTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR GCA 90 bp | CAACACACTTGCCACGACAAAGCAATTGCAAGGACAGAACCAAGCCATTTTAAATCGCCAAGACTCAGCTaGACCGAAAACATCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QHTCHDKAIARTEPSHFKSPRLS*TENIFE Trigger: TTCGAAGATGTTTTCGGTGCAGCTGAGTCTTGGCGA...TTTAAAATGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGCAAGTGTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054668.13 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | CAAATGTCTCCTGGGAGAATCTTGGTTGTGCAAAACAAAATGAGAAGATGGATGGCTCCTTTTCCTTTCTaGCTTGCTGGATCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QMSPGRILVVQNKMRRWMAPFPF*LAGSEP Trigger: TGGCTCAGATCCAGCAAGCCAGAAAGGAAAAGGAGC...CATCCATCTTCTCATTTTGTTTTGCACAACCAAGATTCTCCCAGGAGACATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| 3UTR CAA 72 bp | GTAACCACCACTGTCACAGATCTGGAGATGTTTACCTaGTCCATGAGGAAGAGAATATTACCACAGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTTTVTDLEMFT*SMRKRILPQSK Trigger: CTTGCTCTGTGGTAATATTCTCTTCCTCATGGACAAGGTAAACATCTCCAGATCTGTGACAGTGGTGGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAACTAGGAGTCGGCACACATAAACTTCCCTTCCCACAATTAACAATTCCTAGAAAATTCTCCCACTaGCACCCGAGTTACAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RQLGVGTHKLPFPQLTIPRKFSH*HPSYKT Trigger: AGTTTTGTAACTCGGGTGTCAGTGGGAGAATTTTCT...AGGAATTGTTAATTGTGGGAAGGGAAGTTTATGTGTGCCGACTCCTAGTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR TCA 90 bp | GAGAATCTTGGTTGTGCAAAACAAAATGAGAAGATGGATGTGCCAATCAAGACCCTTCATTGCCTACCTTaGCCTGCATTACGAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ENLGCAKQNEKMDVPIKTLHCLP*PALRTL Trigger: GAGAGTTCGTAATGCAGGTCAAGGTAGGCAATGAAG...GGTCTTGATTGGCACATCCATCTTCTCATTTTGTTTTGCACAACCAAGATTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAACAACTCATACAGAAACGGAACAAATCTTTACTGCATTTGCCCCACACTCTTCATTGCCTACCTTaGCCTGCATTACGAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KEQLIQKRNKSLLHLPHTLHCLP*PALRTL Trigger: GAGAGTTCGTAATGCAGGTCAAGGTAGGCAATGAAG...AGTGTGGGGCAAATGCAGTAAAGATTTGTTCCGTTTCTGTATGAGTTGTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTTATCAGACCTGATTTAAAACAGTTGTTTGCATACATCTTTGTGCTATGCGATTTCTTGCAGTCCTaGGAGATGGAGGCCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVIRPDLKQLFAYIFVLCDFLQS*EMEAGF Trigger: GAAGCCGGCCTCCATCTCTCAGGACTGCAAGAAATC...GCATAGCACAAAGATGTATGCAAACAACTGTTTTAAATCAGGTCTGATAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CCA 90 bp | CACTCGCAGACATTTATAAATGAGCAGTGGGTCACTTTTCATCACAGTTTATTTTCGCAGCATTGTGTCTaGCAGCTTGTCGAGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSQTFINEQWVTFHHSLFSQHCV*QLVESS Trigger: GGAAGACTCGACAAGCTGCCAGACACAATGCTGCGA...AAATAAACTGTGATGAAAAGTGACCCACTGCTCATTTATAAATGTCTGCGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGAGAGTACAGATGTGAATATCAATATGGCAGAAAGCCAGGCAGCAACCCTGATTCACCATTCTaGGGAGACTTTTCTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: RDREYRCEYQYGRKPGSNPDSPF*GDFSGI Trigger: AATTCCAGAAAAGTCTCCCCAGAATGGTGAATCAGG...GTTGCTGCCTGGCTTTCTGCCATATTGATATTCACATCTGTACTCTCTGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGGAACAAGAATAAGTGGGAAAGAAGCTCCATTCCCAAGTCTACACTCATGATCCATTTCTTTTCCTaGTTCACCATTCTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGNKNKWERSSIPKSTLMIHFFS*FTILGR Trigger: TCTCCCCAGAATGGTGAATCAGGAAAAGAAATGGAT...CATGAGTGTAGACTTGGGAATGGAGCTTCTTTCCCACTTATTCTTGTTCCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGAGACAGAGAGTACAGATGTGAATATCAATATGGCAGAAAGCCAGGCAAGAAAATTCTCCCACTaGCACCCGAGTTACAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KRETESTDVNINMAESQARKFSH*HPSYKT Trigger: AGTTTTGTAACTCGGGTGTCAGTGGGAGAATTTTCT...TGCCTGGCTTTCTGCCATATTGATATTCACATCTGTACTCTCTGTCTCTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR CCA 90 bp | CAACACACTTGCCACGACAAAGCAATTGCAAGGACAGAACCAAGCCATTTTAAACCTGATTCACCATTCTaGGGAGACTTTTCTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: QHTCHDKAIARTEPSHFKPDSPF*GDFSGI Trigger: AATTCCAGAAAAGTCTCCCCAGAATGGTGAATCAGG...TTTAAAATGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGCAAGTGTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | CAACAGAGTTCCTGGACAGTAGTGACAGAAAATAAGACATGTGCTATGAATCTCATCCATTTCTTTTCCTaGTTCACCATTCTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QQSSWTVVTENKTCAMNLIHFFS*FTILGR Trigger: TCTCCCCAGAATGGTGAATCAGGAAAAGAAATGGAT...GAGATTCATAGCACATGTCTTATTTTCTGTCACTACTGTCCAGGAACTCTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR TCA 90 bp | TCAAATCAACAGCAGAAAGACTCAACCGTGACTGTAAAAAGGGGAAGTGATGTAAGAAAATTCTCCCACTaGCACCCGAGTTACAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SNQQQKDSTVTVKRGSDVRKFSH*HPSYKT Trigger: AGTTTTGTAACTCGGGTGTCAGTGGGAGAATTTTCT...TACATCACTTCCCCTTTTTACAGTCACGGTTGAGTCTTTCTGCTGTTGATTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| CDS-3UTR TCA 90 bp | CACTCGCAGACATTTATAAATGAGCAGTGGGTCACTTTTCATCACAGTTTATTTCTTCATTGCCTACCTTaGCCTGCATTACGAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSQTFINEQWVTFHHSLFLHCLP*PALRTL Trigger: GAGAGTTCGTAATGCAGGTCAAGGTAGGCAATGAAG...AAATAAACTGTGATGAAAAGTGACCCACTGCTCATTTATAAATGTCTGCGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
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| CDS-3UTR CCA 90 bp | GAGAATCTTGGTTGTGCAAAACAAAATGAGAAGATGGATGTGCCAATCAAGACCCCTGATTCACCATTCTaGGGAGACTTTTCTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: ENLGCAKQNEKMDVPIKTPDSPF*GDFSGI Trigger: AATTCCAGAAAAGTCTCCCCAGAATGGTGAATCAGG...GGTCTTGATTGGCACATCCATCTTCTCATTTTGTTTTGCACAACCAAGATTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR TCA 90 bp | AGTACCAAGTACATTATCTCCTGTGTTAGAATAGTGTTGTCTTCACATAAGACTCACTGCCCCATCAATTaGTTCCAGTCCTTGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STKYIISCVRIVLSSHKTHCPIN*FQSLFR Trigger: TCTGAACAAGGACTGGAATCAATTGATGGGGCAGTG...AGTCTTATGTGAAGACAACACTATTCTAACACAGGAGATAATGTACTTGGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTTATCAGACCTGATTTAAAACAGTTGTTTGCATACATCTTTGTGCTATGCCACTGCCCCATCAATTaGTTCCAGTCCTTGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVIRPDLKQLFAYIFVLCHCPIN*FQSLFR Trigger: TCTGAACAAGGACTGGAATCAATTGATGGGGCAGTG...GCATAGCACAAAGATGTATGCAAACAACTGTTTTAAATCAGGTCTGATAACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR GCA 90 bp | AACAGTACCAAGTACATTATCTCCTGTGTTAGAATAGTGTTGTCTTCACATAAGGCTTTCTCCCGCAGATaGTTGGCTTGTTTTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSTKYIISCVRIVLSSHKAFSRR*LACFSR Trigger: TCTTGAAAAACAAGCCAAGCATCTGCGGGAGAAAGC...CTTATGTGAAGACAACACTATTCTAACACAGGAGATAATGTACTTGGTACTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTTATCAGACCTGATTTAAAACAGTTGTTTGCATACATCTTTGTGCTATGCGCTTTCTCCCGCAGATaGTTGGCTTGTTTTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVIRPDLKQLFAYIFVLCAFSRR*LACFSR Trigger: TCTTGAAAAACAAGCCAAGCATCTGCGGGAGAAAGC...GCATAGCACAAAGATGTATGCAAACAACTGTTTTAAATCAGGTCTGATAACTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | AGTACCAAGTACATTATCTCCTGTGTTAGAATAGTGTTGTCTTCACATAAGACTATCCATTTCTTTTCCTaGTTCACCATTCTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: STKYIISCVRIVLSSHKTIHFFS*FTILGR Trigger: TCTCCCCAGAATGGTGAATCAGGAAAAGAAATGGAT...AGTCTTATGTGAAGACAACACTATTCTAACACAGGAGATAATGTACTTGGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTTATCAGACCTGATTTAAAACAGTTGTTTGCATACATCTTTGTGCTATGCAGAAAATTCTCCCACTaGCACCCGAGTTACAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SVIRPDLKQLFAYIFVLCRKFSH*HPSYKT Trigger: AGTTTTGTAACTCGGGTGTCAGTGGGAGAATTTTCT...GCATAGCACAAAGATGTATGCAAACAACTGTTTTAAATCAGGTCTGATAACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGGGGAGCCAGAGTGTCCTGTGCACACGCAAGCTGCAGTCTCATCCCGTCGGCTTTCATCGCAGCATaGTGTCTGGCAGCTTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: MWGARVSCAHASCSLIPSAFIAA*CLAACR Trigger: TCGACAAGCTGCCAGACACAATGCTGCGATGAAAGC...CGACGGGATGAGACTGCAGCTTGCGTGTGCACAGGACACTCTGGCTCCCCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| CDS-3UTR CAA 90 bp | GTGCGTGCTGACAGGTTTATACGGACGCAGTGGCAGCCGTGGGTTCTGGGAGCTTTGGCTATCTTTTTATaGGGTCCTGTTCCAGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VRADRFIRTQWQPWVLGALAIFL*GPVPVA Trigger: TGCGACTGGAACAGGACCCAATAAAAAGATAGCCAA...AGCTCCCAGAACCCACGGCTGCCACTGCGTCCGTATAAACCTGTCAGCACGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACACCCTCGTGCGTGCTGACAGGTTTATACGGACGCAGTGGCAGCCGTGGCTTTTGGAGTGTTATTaGTTGGTTCAGGAAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TDTLVRADRFIRTQWQPWLLECY*LVQETQ Trigger: CTGGGTTTCCTGAACCAACAAATAACACTCCAAAAG...CCACGGCTGCCACTGCGTCCGTATAAACCTGTCAGCACGCACGAGGGTGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CAA 90 bp | CCTAGAACACAGACACCCTCGTGCGTGCTGACAGGTTTATACGGACGCAGTGGCTCACTGCCCCATCAATaGATTCCAGTCCTTGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRTQTPSCVLTGLYGRSGSLPHQ*IPVLVQ Trigger: CTGAACAAGGACTGGAATCAATTGATGGGGCAGTGA...GCCACTGCGTCCGTATAAACCTGTCAGCACGCACGAGGGTGTCTGTGTTCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS GCA 90 bp | CTTGCAGTCCTGAGAGATGGAGGCCGGCTTCGCCTGGTTATTGTCTaGTTTCTCCCGCAGATGCTTGGCTTGTTTTTCAAGAGAACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LAVLRDGGRLRLVIV*FLPQMLGLFFKRTL Trigger: AAGGGTTCTCTTGAAAAACAAGCCAAGCATCTGCGGGAGAAAGCAGACAATAACCAGGCGAAGCCGGCCTCCATCTCTCAGGACTGCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CAA 90 bp | ACACTCGATGTGAACAGTGAGTGGCTACAACACACAGATGGGGGTGGGCACAATGCTTTCATCGCAGCATaGTGTCTGGCAGCTTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: TLDVNSEWLQHTDGGGHNAFIAA*CLAACR Trigger: TCGACAAGCTGCCAGACACAATGCTGCGATGAAAGC...ATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CAA 90 bp | CATCATGAGACAGCTGCTGTATCAGTGGCGGTAGATGCTTCTCCACCCTGGCCCTTGGCTATCTTTTTATaGGGTCCTGTTCCAGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: HHETAAVSVAVDASPPWPLAIFL*GPVPVA Trigger: TGCGACTGGAACAGGACCCAATAAAAAGATAGCCAA...GGGCCAGGGTGGAGAAGCATCTACCGCCACTGATACAGCAGCTGTCTCATGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| CDS-3UTR CAA 90 bp | CGAGTCCAGAGGCAGTTACTAGAGACACTCGATGTGAACAGTGAGTGGCTACAAGCTTTCATCGCAGCATaGTGTCTGGCAGCTTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: RVQRQLLETLDVNSEWLQAFIAA*CLAACR Trigger: TCGACAAGCTGCCAGACACAATGCTGCGATGAAAGC...TTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCTCTGGACTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CAA 90 bp | GAGTGGCTACAACACACAGATGGGGGTGGGCACAATTTCCACGACAGCGTAGACTTCTCCCGCAGATGCTaGGCTTGTTTTTCAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: EWLQHTDGGGHNFHDSVDFSRRC*ACFSRE Trigger: TTCTCTTGAAAAACAAGCCAAGCATCTGCGGGAGAA...GTCTACGCTGTCGTGGAAATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CAA 90 bp | GGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACAGGCTTGGCTATCTTTTTATaGGGTCCTGTTCCAGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GFQHAGPERDWLEASPTGLAIFL*GPVPVA Trigger: TGCGACTGGAACAGGACCCAATAAAAAGATAGCCAA...GCCTGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CAA 90 bp | GAGTGGCTACAACACACAGATGGGGGTGGGCACAATTTCCACGACAGCGTAGACCTTTTGGAGTGTTATTaGTTGGTTCAGGAAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EWLQHTDGGGHNFHDSVDLLECY*LVQETQ Trigger: CTGGGTTTCCTGAACCAACAAATAACACTCCAAAAG...GTCTACGCTGTCGTGGAAATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CAA 90 bp | ACACTCGATGTGAACAGTGAGTGGCTACAACACACAGATGGGGGTGGGCACAATTTGGCTATCTTTTTATaGGGTCCTGTTCCAGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: TLDVNSEWLQHTDGGGHNLAIFL*GPVPVA Trigger: TGCGACTGGAACAGGACCCAATAAAAAGATAGCCAA...ATTGTGCCCACCCCCATCTGTGTGTTGTAGCCACTCACTGTTCACATCGAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CAA 90 bp | ACTGGATTCCAACATGCTGGTCCAGAGCGTGATTGGCTAGAAGCTTCTCCAACATCACTGCCCCATCAATaGATTCCAGTCCTTGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TGFQHAGPERDWLEASPTSLPHQ*IPVLVQ Trigger: CTGAACAAGGACTGGAATCAATTGATGGGGCAGTGA...TGTTGGAGAAGCTTCTAGCCAATCACGCTCTGGACCAGCATGTTGGAATCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CAA 90 bp | AGAGACAGAGAGTACAGATGTGAATATCAATATGGCAGAAAGCCAGGCAGCAACGCTTTCATCGCAGCATaGTGTCTGGCAGCTTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: RDREYRCEYQYGRKPGSNAFIAA*CLAACR Trigger: TCGACAAGCTGCCAGACACAATGCTGCGATGAAAGC...GTTGCTGCCTGGCTTTCTGCCATATTGATATTCACATCTGTACTCTCTGTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| CDS-3UTR CAA 90 bp | CGAGTCCAGAGGCAGTTACTAGAGACACTCGATGTGAACAGTGAGTGGCTACAATTCTCCCGCAGATGCTaGGCTTGTTTTTCAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RVQRQLLETLDVNSEWLQFSRRC*ACFSRE Trigger: TTCTCTTGAAAAACAAGCCAAGCATCTGCGGGAGAA...TTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCTCTGGACTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CAA 90 bp | CGAGTCCAGAGGCAGTTACTAGAGACACTCGATGTGAACAGTGAGTGGCTACAACTTTTGGAGTGTTATTaGTTGGTTCAGGAAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVQRQLLETLDVNSEWLQLLECY*LVQETQ Trigger: CTGGGTTTCCTGAACCAACAAATAACACTCCAAAAG...TTGTAGCCACTCACTGTTCACATCGAGTGTCTCTAGTAACTGCCTCTGGACTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CAA 90 bp | CAACAGAGTTCCTGGACAGTAGTGACAGAAAATAAGACATGTGCTATGAATCTCGCTTTCATCGCAGCATaGTGTCTGGCAGCTTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: QQSSWTVVTENKTCAMNLAFIAA*CLAACR Trigger: TCGACAAGCTGCCAGACACAATGCTGCGATGAAAGC...GAGATTCATAGCACATGTCTTATTTTCTGTCACTACTGTCCAGGAACTCTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| CDS-3UTR CAA 90 bp | GGCCGAGGACTAATGCATAAGGAACTCAGAAACTTCAAAACTCAGCCAAAAGCCCTTTTGGAGTGTTATTaGTTGGTTCAGGAAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRGLMHKELRNFKTQPKALLECY*LVQETQ Trigger: CTGGGTTTCCTGAACCAACAAATAACACTCCAAAAG...GGCTTTTGGCTGAGTTTTGAAGTTTCTGAGTTCCTTATGCATTAGTCCTCGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 |
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| CDS-3UTR CAA 90 bp | CAACACACTTGCCACGACAAAGCAATTGCAAGGACAGAACCAAGCCATTTTAAATCACTGCCCCATCAATaGATTCCAGTCCTTGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QHTCHDKAIARTEPSHFKSLPHQ*IPVLVQ Trigger: CTGAACAAGGACTGGAATCAATTGATGGGGCAGTGA...TTTAAAATGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGCAAGTGTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGAGAGACAGAGAGTACAGATGTGAATATCAATATGGCAGAAAGCCAGGCATTGGCTATCTTTTTATaGGGTCCTGTTCCAGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: KRETESTDVNINMAESQALAIFL*GPVPVA Trigger: TGCGACTGGAACAGGACCCAATAAAAAGATAGCCAA...TGCCTGGCTTTCTGCCATATTGATATTCACATCTGTACTCTCTGTCTCTCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGGAACAAGAATAAGTGGGAAAGAAGCTCCATTCCCAAGTCTACACTCATGTTGGCTATCTTTTTATaGGGTCCTGTTCCAGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: KGNKNKWERSSIPKSTLMLAIFL*GPVPVA Trigger: TGCGACTGGAACAGGACCCAATAAAAAGATAGCCAA...CATGAGTGTAGACTTGGGAATGGAGCTTCTTTCCCACTTATTCTTGTTCCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR CAA 90 bp | CAACACACTTGCCACGACAAAGCAATTGCAAGGACAGAACCAAGCCATTTTAAATTGGCTATCTTTTTATaGGGTCCTGTTCCAGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QHTCHDKAIARTEPSHFKLAIFL*GPVPVA Trigger: TGCGACTGGAACAGGACCCAATAAAAAGATAGCCAA...TTTAAAATGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGCAAGTGTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CAA 90 bp | AGAGACAGAGAGTACAGATGTGAATATCAATATGGCAGAAAGCCAGGCAGCAACCTTTTGGAGTGTTATTaGTTGGTTCAGGAAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RDREYRCEYQYGRKPGSNLLECY*LVQETQ Trigger: CTGGGTTTCCTGAACCAACAAATAACACTCCAAAAG...GTTGCTGCCTGGCTTTCTGCCATATTGATATTCACATCTGTACTCTCTGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR CAA 90 bp | CAACACACTTGCCACGACAAAGCAATTGCAAGGACAGAACCAAGCCATTTTAAATTCTCCCGCAGATGCTaGGCTTGTTTTTCAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QHTCHDKAIARTEPSHFKFSRRC*ACFSRE Trigger: TTCTCTTGAAAAACAAGCCAAGCATCTGCGGGAGAA...TTTAAAATGGCTTGGTTCTGTCCTTGCAATTGCTTTGTCGTGGCAAGTGTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
||
| CDS-3UTR CAA 90 bp | TCAAATCAACAGCAGAAAGACTCAACCGTGACTGTAAAAAGGGGAAGTGATGTATTGGCTATCTTTTTATaGGGTCCTGTTCCAGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SNQQQKDSTVTVKRGSDVLAIFL*GPVPVA Trigger: TGCGACTGGAACAGGACCCAATAAAAAGATAGCCAA...TACATCACTTCCCCTTTTTACAGTCACGGTTGAGTCTTTCTGCTGTTGATTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
||
| CDS-3UTR CAA 90 bp | CAACAGAGTTCCTGGACAGTAGTGACAGAAAATAAGACATGTGCTATGAATCTCCTTTTGGAGTGTTATTaGTTGGTTCAGGAAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QQSSWTVVTENKTCAMNLLLECY*LVQETQ Trigger: CTGGGTTTCCTGAACCAACAAATAACACTCCAAAAG...GAGATTCATAGCACATGTCTTATTTTCTGTCACTACTGTCCAGGAACTCTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000128957.9 ENSMUST00000131257.9 ENSMUST00000159558.8 ENSMUST00000162007.8 |
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| CDS-3UTR CAA 90 bp | AGTACCAAGTACATTATCTCCTGTGTTAGAATAGTGTTGTCTTCACATAAGACTTCACTGCCCCATCAATaGATTCCAGTCCTTGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: STKYIISCVRIVLSSHKTSLPHQ*IPVLVQ Trigger: CTGAACAAGGACTGGAATCAATTGATGGGGCAGTGA...AGTCTTATGTGAAGACAACACTATTCTAACACAGGAGATAATGTACTTGGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CAA 90 bp | AACAGTACCAAGTACATTATCTCCTGTGTTAGAATAGTGTTGTCTTCACATAAGTTGGCTATCTTTTTATaGGGTCCTGTTCCAGTCGCA | + |
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Preference number: 5 (lower is better) Translates to: NSTKYIISCVRIVLSSHKLAIFL*GPVPVA Trigger: TGCGACTGGAACAGGACCCAATAAAAAGATAGCCAA...CTTATGTGAAGACAACACTATTCTAACACAGGAGATAATGTACTTGGTACTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CAA 90 bp | TCAGTTATCAGACCTGATTTAAAACAGTTGTTTGCATACATCTTTGTGCTATGCTTCTCCCGCAGATGCTaGGCTTGTTTTTCAAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: SVIRPDLKQLFAYIFVLCFSRRC*ACFSRE Trigger: TTCTCTTGAAAAACAAGCCAAGCATCTGCGGGAGAA...GCATAGCACAAAGATGTATGCAAACAACTGTTTTAAATCAGGTCTGATAACTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CAA 90 bp | TCAGTTATCAGACCTGATTTAAAACAGTTGTTTGCATACATCTTTGTGCTATGCCTTTTGGAGTGTTATTaGTTGGTTCAGGAAACCCAG | + |
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Preference number: 5 (lower is better) Translates to: SVIRPDLKQLFAYIFVLCLLECY*LVQETQ Trigger: CTGGGTTTCCTGAACCAACAAATAACACTCCAAAAG...GCATAGCACAAAGATGTATGCAAACAACTGTTTTAAATCAGGTCTGATAACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS-3UTR CAA 90 bp | AACAGTACCAAGTACATTATCTCCTGTGTTAGAATAGTGTTGTCTTCACATAAGCTTTTGGAGTGTTATTaGTTGGTTCAGGAAACCCAG | + |
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Preference number: 5 (lower is better) Translates to: NSTKYIISCVRIVLSSHKLLECY*LVQETQ Trigger: CTGGGTTTCCTGAACCAACAAATAACACTCCAAAAG...CTTATGTGAAGACAACACTATTCTAACACAGGAGATAATGTACTTGGTACTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS GCA 72 bp | CTGAGAGATGGAGGCCGGCTTCGCCTGGTTATTGTCTaGTTTCTCCCGCAGATGCTTGGCTTGTTTTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: LRDGGRLRLVIV*FLPQMLGLFFK Trigger: CTTGAAAAACAAGCCAAGCATCTGCGGGAGAAAGCAGACAATAACCAGGCGAAGCCGGCCTCCATCTCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS CCA 72 bp | AGATGGCCGACTTTGATTTCTTGCAGTCCTGAGAGATaGAGGCCGGCTTCGCCTGGTTATTGTCTGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: RWPTLISCSPER*RPASPGYCLLS Trigger: AGAAAGCAGACAATAACCAGGCGAAGCCGGCCTCCATCTCTCAGGACTGCAAGAAATCAAAGTCGGCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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| CDS GCA 72 bp | GGCTTCGCCTGGTTATTGTCTGCTTTCTCCCGCAGATaGTTGGCTTGTTTTTCAAGAGAACCCTTTTCAACA | + |
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Preference number: 6 (lower is better) Translates to: GFAWLLSAFSRR*LACFSREPFST Trigger: TGTTGAAAAGGGTTCTCTTGAAAAACAAGCCAAGCATCTGCGGGAGAAAGCAGACAATAACCAGGCGAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000027052.13 ENSMUST00000054668.13 ENSMUST00000162435.8 ENSMUST00000162627.8 ENSMUST00000162751.8 |
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