Pregenerated sensors for STAT6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002147Ensembl transcript IDs: ENSMUST00000092074.12, ENSMUST00000120279.2
Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CAGTTCTTTTCTCTTGACCAAGGAACAGTTGAGACGGAAGGCACCTaGATGAGCAGGTGTCCAGAGCTGGTCCATAGAGACAGAAGAGGC | + |
Preference number: 1 (lower is better) Translates to: QFFSLDQGTVETEGT*MSRCPELVHRDRRG Trigger: GCCTCTTCTGTCTCTATGGACCAGCTCTGGACACCTGCTCATGCAGGTGCCTTCCGTCTCAACTGTTCCTTGGTCAAGAGAAAAGAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CCA 90 bp | CCTGAGCCCAGCTTCAATGCCCTAGGCCTATATGCCCTCTGTCTTTaGCACAATGTCTCTATGTTTCTGTATGTTGAGTCCCAGGCCCTG | + |
Preference number: 1 (lower is better) Translates to: PEPSFNALGLYALCL*HNVSMFLYVESQAL Trigger: CAGGGCCTGGGACTCAACATACAGAAACATAGAGACATTGTGCCAAAGACAGAGGGCATATAGGCCTAGGGCATTGAAGCTGGGCTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CCA 90 bp | TTTGGCACAATGTCTCTATGTTTCTGTATGTTGAGTCCCAGGCCCTaGCTCAACACAGTTCTGGTGTGTGTGTATGTGTGTGTGCGTGTG | + |
Preference number: 1 (lower is better) Translates to: FGTMSLCFCMLSPRP*LNTVLVCVYVCVRV Trigger: CACACGCACACACACATACACACACACCAGAACTGTGTTGAGCCAGGGCCTGGGACTCAACATACAGAAACATAGAGACATTGTGCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR TCA 90 bp | ATATGCCCTCTGTCTTTGGCACAATGTCTCTATGTTTCTGTATGTTaGGTCCCAGGCCCTGGCTCAACACAGTTCTGGTGTGTGTGTATG | + |
Preference number: 1 (lower is better) Translates to: ICPLSLAQCLYVSVC*VPGPGSTQFWCVCM Trigger: CATACACACACACCAGAACTGTGTTGAGCCAGGGCCTGGGACTCAACATACAGAAACATAGAGACATTGTGCCAAAGACAGAGGGCATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CCA 90 bp | AGAGAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTaGAAGCATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAG | + |
Preference number: 1 (lower is better) Translates to: REVCIPTYIPGSRKH*KHQVTQARALCMSQ Trigger: CTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR GCA 90 bp | TATGCATGTCACAGCCACATAGTTACTCCCCAAATGATACTGGGTTaGTGTCTTATACAATGTCTCAGCCTTTCAGATATGTTAAGGTCA | + |
Preference number: 1 (lower is better) Translates to: YACHSHIVTPQMILG*CLIQCLSLSDMLRS Trigger: TGACCTTAACATATCTGAAAGGCTGAGACATTGTATAAGACAGCAACCCAGTATCATTTGGGGAGTAACTATGTGGCTGTGACATGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CCA 90 bp | TGTCTTATACAATGTCTCAGCCTTTCAGATATGTTAAGGTCACACTaGCAAAAGCAGAAGATACATGTTCTGTGCGGTCATACAGTGATG | + |
Preference number: 1 (lower is better) Translates to: CLIQCLSLSDMLRSH*QKQKIHVLCGHTVM Trigger: CATCACTGTATGACCGCACAGAACATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCTGAAAGGCTGAGACATTGTATAAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR TCA 90 bp | AGGACAGAGCACAGCAGTTCCATACACCACATGGTCTCCCAGCCAGTTCTTTTCCGGAAGGCACCTGCATaGGCAGGTGTCCAGAGCTGG | + |
Preference number: 2 (lower is better) Translates to: RTEHSSSIHHMVSQPVLFRKAPA*AGVQSW Trigger: CCAGCTCTGGACACCTGCTCATGCAGGTGCCTTCCG...GAAAAGAACTGGCTGGGAGACCATGTGGTGTATGGAACTGCTGTGCTCTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR GCA 90 bp | GAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACGCCGAGACGGAAGGCACCTaGATGAGCAGGTGTCCAGAG | + |
Preference number: 2 (lower is better) Translates to: ELAVDRKVQETAVEGLNAETEGT*MSRCPE Trigger: CTCTGGACACCTGCTCATGCAGGTGCCTTCCGTCTC...GGCGTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR CCA 90 bp | GCAGAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACTTGAGTCCCAGGCCCTaGCTCAACACAGTTCTGGTG | + |
Preference number: 2 (lower is better) Translates to: AELAVDRKVQETAVEGLNLSPRP*LNTVLV Trigger: CACCAGAACTGTGTTGAGCCAGGGCCTGGGACTCAA...GTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR TCA 90 bp | GCAGAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACTATGTTTCTGTATGTTaGGTCCCAGGCCCTGGCTCA | + |
Preference number: 2 (lower is better) Translates to: AELAVDRKVQETAVEGLNYVSVC*VPGPGS Trigger: TGAGCCAGGGCCTGGGACTCAACATACAGAAACATA...GTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR TCA 90 bp | CTATACACAAGCTTAGCTCTTAGAATGCAGTCTCAAATGTCACTAGGCATCTTTCCTCCCAGAGTCACCTaGGCCCAGCTTCAATGCCCT | + |
Preference number: 2 (lower is better) Translates to: LYTSLALRMQSQMSLGIFPPRVT*AQLQCP Trigger: AGGGCATTGAAGCTGGGCTCAGGTGACTCTGGGAGG...AAAGATGCCTAGTGACATTTGAGACTGCATTCTAAGAGCTAAGCTTGTGTATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CAA 90 bp | TATATGCCCTCTGTCTTTGGCACAATGTCTCTATGTTTCTGTATGTaGAGTCCCAGGCCCTGGCTCAACACAGTTCTGGTGTGTGTGTAT | + |
Preference number: 2 (lower is better) Translates to: YMPSVFGTMSLCFCM*SPRPWLNTVLVCVY Trigger: ATACACACACACCAGAACTGTGTTGAGCCAGGGCCTGGGACTCAACATACAGAAACATAGAGACATTGTGCCAAAGACAGAGGGCATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR TCA 90 bp | AGAGCTTTATGCATGTCACAGCCACATAGTTACTCCCCAAATGATACTGGGTTGTGTGCGTGTGTGTTGTaGTACAGTTGTATCACATTC | + |
Preference number: 2 (lower is better) Translates to: RALCMSQPHSYSPNDTGLCACVL*YSCITF Trigger: GAATGTGATACAACTGTATCACAACACACACGCACA...CAACCCAGTATCATTTGGGGAGTAACTATGTGGCTGTGACATGCATAAAGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR CCA 90 bp | AGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCCCAAATGATACTGTATGCCCTCTGTCTTTaGCACAATGTCTCTATGTTT | + |
Preference number: 2 (lower is better) Translates to: RLELYACHSHIVTPQMILYALCL*HNVSMF Trigger: AAACATAGAGACATTGTGCCAAAGACAGAGGGCATA...CAGTATCATTTGGGGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR CCA 90 bp | AGAGCTTTATGCATGTCACAGCCACATAGTTACTCCCCAAATGATACTGGGTTGGTCTTGGGTAAACATTaGTACAGCTATACACAAGCT | + |
Preference number: 2 (lower is better) Translates to: RALCMSQPHSYSPNDTGLVLGKH*YSYTQA Trigger: AGCTTGTGTATAGCTGTACCAATGTTTACCCAAGAC...CAACCCAGTATCATTTGGGGAGTAACTATGTGGCTGTGACATGCATAAAGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR CCA 90 bp | CATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCATGTTAAGGTCACACTaGCAAAAGCAGAAGATACAT | + |
Preference number: 2 (lower is better) Translates to: HQVTQARALCMSQPHSYSMLRSH*QKQKIH Trigger: ATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACAT...GGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CAA 90 bp | TTATGCATGTCACAGCCACATAGTTACTCCCCAAATGATACTGGGTaGCTGTCTTATACAATGTCTCAGCCTTTCAGATATGTTAAGGTC | + |
Preference number: 2 (lower is better) Translates to: LCMSQPHSYSPNDTG*LSYTMSQPFRYVKV Trigger: GACCTTAACATATCTGAAAGGCTGAGACATTGTATAAGACAGCAACCCAGTATCATTTGGGGAGTAACTATGTGGCTGTGACATGCATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR CAA 90 bp | GAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACGCCACCCCACTCATCCCTTaGCACCCAGTGCTGGAAAAG | + |
Preference number: 3 (lower is better) Translates to: ELAVDRKVQETAVEGLNATPLIP*HPVLEK Trigger: CTTTTCCAGCACTGGGTGCAAAGGGATGAGTGGGGT...GGCGTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR TCA 72 bp | GCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTaGGGGCCTCAACGCCCAGGGAGTTTACACAGAGAG | + |
Preference number: 3 (lower is better) Translates to: AGSGQKSTRDSS*GPQRPGSLHRE Trigger: CTCTCTGTGTAAACTCCCTGGGCGTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR GCA 72 bp | TCTCTTGACCAAGGAACAGTTGAGACGGAAGGCACCTaGATGAGCAGGTGTCCAGAGCTGGTCCATAGAGAC | + |
Preference number: 3 (lower is better) Translates to: SLDQGTVETEGT*MSRCPELVHRD Trigger: GTCTCTATGGACCAGCTCTGGACACCTGCTCATGCAGGTGCCTTCCGTCTCAACTGTTCCTTGGTCAAGAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR GCA 72 bp | GGGCCTCAACGCCCAGGGAGTTTACACAGAGAGGTCTaGATCCCTACTTATATCCCAGGCTCTAGGAAACAC | + |
Preference number: 3 (lower is better) Translates to: GPQRPGSLHREV*IPTYIPGSRKH Trigger: GTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTCTCTGTGTAAACTCCCTGGGCGTTGAGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR TCA 72 bp | TTGACCAAGGAACAGTTGAGACGGAAGGCACCTGCATaGGCAGGTGTCCAGAGCTGGTCCATAGAGACAGAA | + |
Preference number: 3 (lower is better) Translates to: LTKEQLRRKAPA*AGVQSWSIETE Trigger: TTCTGTCTCTATGGACCAGCTCTGGACACCTGCTCATGCAGGTGCCTTCCGTCTCAACTGTTCCTTGGTCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR CAA 90 bp | CTCCCAGCCAGTTCTTTTCTCTTGACCAAGGAACAGTTGAGACGGAAGGCACCTGAGACAGAAGAGGCTTaGTTTCTGGGCTTCTCCAGC | + |
Preference number: 3 (lower is better) Translates to: LPASSFLLTKEQLRRKAPETEEA*FLGFSS Trigger: GCTGGAGAAGCCCAGAAACAAAGCCTCTTCTGTCTC...AGGTGCCTTCCGTCTCAACTGTTCCTTGGTCAAGAGAAAAGAACTGGCTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CCA 72 bp | CAGGAAGGACAGAGCACAGCAGTTCCATACACCACATaGTCTCCCAGCCAGTTCTTTTCTCTTGACCAAGGA | + |
Preference number: 3 (lower is better) Translates to: QEGQSTAVPYTT*SPSQFFSLDQG Trigger: TCCTTGGTCAAGAGAAAAGAACTGGCTGGGAGACCATGTGGTGTATGGAACTGCTGTGCTCTGTCCTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR TCA 72 bp | CTGTCTTTGGCACAATGTCTCTATGTTTCTGTATGTTaGGTCCCAGGCCCTGGCTCAACACAGTTCTGGTGT | + |
Preference number: 3 (lower is better) Translates to: LSLAQCLYVSVC*VPGPGSTQFWC Trigger: ACACCAGAACTGTGTTGAGCCAGGGCCTGGGACTCAACATACAGAAACATAGAGACATTGTGCCAAAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR CAA 90 bp | GAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTGGAAGCATCAAGCCAGTTCTTTTCTCTaGACCAAGGAACAGTTGAGA | + |
Preference number: 3 (lower is better) Translates to: EVCIPTYIPGSRKHWKHQASSFL*TKEQLR Trigger: TCTCAACTGTTCCTTGGTCAAGAGAAAAGAACTGGC...TTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CCA 72 bp | ATGTCTCTATGTTTCTGTATGTTGAGTCCCAGGCCCTaGCTCAACACAGTTCTGGTGTGTGTGTATGTGTGT | + |
Preference number: 3 (lower is better) Translates to: MSLCFCMLSPRP*LNTVLVCVYVC Trigger: ACACACATACACACACACCAGAACTGTGTTGAGCCAGGGCCTGGGACTCAACATACAGAAACATAGAGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CCA 72 bp | TGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTaGAAGCATCAAGTTACCCAGGCTAGAGCTTTATGC | + |
Preference number: 3 (lower is better) Translates to: CIPTYIPGSRKH*KHQVTQARALC Trigger: GCATAAAGCTCTAGCCTGGGTAACTTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR CAA 90 bp | TGTCTCAGCCTTTCAGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATTTGACCAAGGAACAGTaGAGACGGAAGGCACCTGCA | + |
Preference number: 3 (lower is better) Translates to: CLSLSDMLRSHWQKQKIHLTKEQ*RRKAPA Trigger: TGCAGGTGCCTTCCGTCTCAACTGTTCCTTGGTCAA...ATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCTGAAAGGCTGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CCA 72 bp | AGCTTCAATGCCCTAGGCCTATATGCCCTCTGTCTTTaGCACAATGTCTCTATGTTTCTGTATGTTGAGTCC | + |
Preference number: 3 (lower is better) Translates to: SFNALGLYALCL*HNVSMFLYVES Trigger: GGACTCAACATACAGAAACATAGAGACATTGTGCCAAAGACAGAGGGCATATAGGCCTAGGGCATTGAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR CAA 90 bp | CATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCCCAAATGATACTGGGTaGCTGTCTTATACAATGTCT | + |
Preference number: 3 (lower is better) Translates to: HQVTQARALCMSQPHSYSPNDTG*LSYTMS Trigger: AGACATTGTATAAGACAGCAACCCAGTATCATTTGG...GGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR GCA 72 bp | CACAGCCACATAGTTACTCCCCAAATGATACTGGGTTaGTGTCTTATACAATGTCTCAGCCTTTCAGATATG | + |
Preference number: 3 (lower is better) Translates to: HSHIVTPQMILG*CLIQCLSLSDM Trigger: CATATCTGAAAGGCTGAGACATTGTATAAGACAGCAACCCAGTATCATTTGGGGAGTAACTATGTGGCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CCA 72 bp | CAATGTCTCAGCCTTTCAGATATGTTAAGGTCACACTaGCAAAAGCAGAAGATACATGTTCTGTGCGGTCAT | + |
Preference number: 3 (lower is better) Translates to: QCLSLSDMLRSH*QKQKIHVLCGH Trigger: ATGACCGCACAGAACATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCTGAAAGGCTGAGACATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR-3UTR CAA 90 bp | AGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATGTTCTGTGCGGTCAATATGCCCTCTGTCTTaGGCACAATGTCTCTATGTT | + |
Preference number: 3 (lower is better) Translates to: RYVKVTLAKAEDTCSVRSICPLS*AQCLYV Trigger: AACATAGAGACATTGTGCCAAAGACAGAGGGCATAT...TGACCGCACAGAACATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | AGGACAGAGCACAGCAGTTCCATACACCACATGGTCTCCCAGCCAGTTCTTTTCGCACCAGGGCCTGGGTaGCCTCCAGGTCCCCCACAG | + |
Preference number: 4 (lower is better) Translates to: RTEHSSSIHHMVSQPVLFAPGPG*PPGPPQ Trigger: CTGTGGGGGACCTGGAGGCCACCCAGGCCCTGGTGC...GAAAAGAACTGGCTGGGAGACCATGTGGTGTATGGAACTGCTGTGCTCTGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | CTCCCAGCCAGTTCTTTTCTCTTGACCAAGGAACAGTTGAGACGGAAGGCACCTTTCAGCACCAGGGCCTaGGTGGCCTCCAGGTCCCCC | + |
Preference number: 4 (lower is better) Translates to: LPASSFLLTKEQLRRKAPFSTRA*VASRSP Trigger: GGGGGACCTGGAGGCCACCCAGGCCCTGGTGCTGAA...AGGTGCCTTCCGTCTCAACTGTTCCTTGGTCAAGAGAAAAGAACTGGCTGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | GAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACGCCCAGTCCCCTGCAGCATaGTGGCCAGGTCCTCACTTG | + |
Preference number: 4 (lower is better) Translates to: ELAVDRKVQETAVEGLNAQSPAA*WPGPHL Trigger: CAAGTGAGGACCTGGCCACCATGCTGCAGGGGACTG...GGCGTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | CAGTTGTATCACATTCGAGCATTAACACCCCACTCATCCCTTTGCACCCAGTGCTCCCCCACAGTCCCCTaGAGCATGGTGGCCAGGTCC | + |
Preference number: 4 (lower is better) Translates to: QLYHIRALTPHSSLCTQCSPTVP*SMVARS Trigger: GGACCTGGCCACCATGCTGCAGGGGACTGTGGGGGA...GCACTGGGTGCAAAGGGATGAGTGGGGTGTTAATGCTCGAATGTGATACAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | GAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACGCCGCATGGGTTCAGGGCTaGACACAGCATGTTCCTGGG | + |
Preference number: 4 (lower is better) Translates to: ELAVDRKVQETAVEGLNAAWVQG*TQHVPG Trigger: CCCAGGAACATGCTGTGTCCAGCCCTGAACCCATGC...GGCGTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | CAGAGCACAGCAGTTCCATACACCACATGGTCTCCCAGCCAGTTCTTTTCTCTTAGCAGACCCTGGGGGTaGGGCTGGTCAAAGGGCATG | + |
Preference number: 4 (lower is better) Translates to: QSTAVPYTTWSPSQFFSLSRPWG*GWSKGM Trigger: CATGCCCTTTGACCAGCCTCACCCCCAGGGTCTGCT...AAGAGAAAAGAACTGGCTGGGAGACCATGTGGTGTATGGAACTGCTGTGCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | GCAGAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACGGGCGGAGCAGCAGTTaGTGGGAATGCTGTTCTCCA | + |
Preference number: 4 (lower is better) Translates to: AELAVDRKVQETAVEGLNGRSSS*WECCSP Trigger: TGGAGAACAGCATTCCCAGCAACTGCTGCTCCGCCC...GTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | ACCTGCATGAGCAGGTGTCCAGAGCTGGTCCATAGAGACAGAAGAGGCTTTGTTAGGCATCTGGGGCTCTaGAGTAGGAAGGGGCTGGTC | + |
Preference number: 4 (lower is better) Translates to: TCMSRCPELVHRDRRGFVRHLGL*SRKGLV Trigger: GACCAGCCCCTTCCTACTCCAGAGCCCCAGATGCCT...AACAAAGCCTCTTCTGTCTCTATGGACCAGCTCTGGACACCTGCTCATGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | GGACAGAGCACAGCAGTTCCATACACCACATGGTCTCCCAGCCAGTTCTTTTCTGGTTGCAGGAGGGGCTaGCTTCCTAAGGACCCTCCT | + |
Preference number: 4 (lower is better) Translates to: GQSTAVPYTTWSPSQFFSGCRRG*LPKDPP Trigger: AGGAGGGTCCTTAGGAAGCCAGCCCCTCCTGCAACC...AGAAAAGAACTGGCTGGGAGACCATGTGGTGTATGGAACTGCTGTGCTCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | GCAGAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACGGTTACCATGCACGATaGCCACCAAGGGCAGAGACA | + |
Preference number: 4 (lower is better) Translates to: AELAVDRKVQETAVEGLNGYHAR*PPRAET Trigger: TGTCTCTGCCCTTGGTGGTCATCGTGCATGGTAACC...GTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | CAGTTGTATCACATTCGAGCATTAACACCCCACTCATCCCTTTGCACCCAGTGCGACACACAGCGGTGCTaGAAGGCCTCCACACTGAGG | + |
Preference number: 4 (lower is better) Translates to: QLYHIRALTPHSSLCTQCDTQRC*KASTLR Trigger: CCTCAGTGTGGAGGCCTTTCAGCACCGCTGTGTGTC...GCACTGGGTGCAAAGGGATGAGTGGGGTGTTAATGCTCGAATGTGATACAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | GCAGAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACGATGTTCTCTATCTGTaGGGAGCCATCCTGACCCCG | + |
Preference number: 4 (lower is better) Translates to: AELAVDRKVQETAVEGLNDVLYL*GAILTP Trigger: CGGGGTCAGGATGGCTCCTCACAGATAGAGAACATC...GTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | CTCCCAGCCAGTTCTTTTCTCTTGACCAAGGAACAGTTGAGACGGAAGGCACCTGATCCGGTCCCCCAGTaGGCGAATGGACAGGTCTTT | + |
Preference number: 4 (lower is better) Translates to: LPASSFLLTKEQLRRKAPDPVPQ*ANGQVF Trigger: AAAGACCTGTCCATTCGCTCACTGGGGGACCGGATC...AGGTGCCTTCCGTCTCAACTGTTCCTTGGTCAAGAGAAAAGAACTGGCTGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | GGACAGAGCACAGCAGTTCCATACACCACATGGTCTCCCAGCCAGTTCTTTTCTAGCAGTTGCTGGGAATaGTGTTCTCCAGGGGCACCG | + |
Preference number: 4 (lower is better) Translates to: GQSTAVPYTTWSPSQFFSSSCWE*CSPGAP Trigger: CGGTGCCCCTGGAGAACAGCATTCCCAGCAACTGCT...AGAAAAGAACTGGCTGGGAGACCATGTGGTGTATGGAACTGCTGTGCTCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | CTCCCAGCCAGTTCTTTTCTCTTGACCAAGGAACAGTTGAGACGGAAGGCACCTCGGAGCAGCAGTTGCTaGGAATGCTGTTCTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: LPASSFLLTKEQLRRKAPRSSSC*ECCSPG Trigger: CCCTGGAGAACAGCATTCCCAGCAACTGCTGCTCCG...AGGTGCCTTCCGTCTCAACTGTTCCTTGGTCAAGAGAAAAGAACTGGCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | AGGACAGAGCACAGCAGTTCCATACACCACATGGTCTCCCAGCCAGTTCTTTTCGAACAGGAAGTGCTCTaGAAGCAGTCCCCGGCTGGT | + |
Preference number: 4 (lower is better) Translates to: RTEHSSSIHHMVSQPVLFEQEVL*KQSPAG Trigger: ACCAGCCGGGGACTGCTTCCAGAGCACTTCCTGTTC...GAAAAGAACTGGCTGGGAGACCATGTGGTGTATGGAACTGCTGTGCTCTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | GAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTGGAAGCATCAACCTGCTCTCCAGCAGTaGCCTGAAGACGCTGGACTG | + |
Preference number: 4 (lower is better) Translates to: EVCIPTYIPGSRKHWKHQPALQQ*PEDAGL Trigger: CAGTCCAGCGTCTTCAGGCCACTGCTGGAGAGCAGG...TTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | CAGAGCACAGCAGTTCCATACACCACATGGTCTCCCAGCCAGTTCTTTTCTCTTCATAAGGTGGCACCATaGCAGGCATCTGGGGCTCTG | + |
Preference number: 4 (lower is better) Translates to: QSTAVPYTTWSPSQFFSLHKVAP*QASGAL Trigger: CAGAGCCCCAGATGCCTGCCATGGTGCCACCTTATG...AAGAGAAAAGAACTGGCTGGGAGACCATGTGGTGTATGGAACTGCTGTGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | CAGAGCACAGCAGTTCCATACACCACATGGTCTCCCAGCCAGTTCTTTTCTCTTCCTCCTGCCTCCCCTTaGTTCTCCAGGAGAAGCTTG | + |
Preference number: 4 (lower is better) Translates to: QSTAVPYTTWSPSQFFSLPPASP*FSRRSL Trigger: CAAGCTTCTCCTGGAGAACCAAGGGGAGGCAGGAGG...AAGAGAAAAGAACTGGCTGGGAGACCATGTGGTGTATGGAACTGCTGTGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CAA 72 bp | AGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTaGAGGGCCTCAACGCCCAGGGAGTTTACACAGAGA | + |
Preference number: 4 (lower is better) Translates to: SWQWTEKYKRQQ*RASTPREFTQR Trigger: TCTCTGTGTAAACTCCCTGGGCGTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | ACCTGCATGAGCAGGTGTCCAGAGCTGGTCCATAGAGACAGAAGAGGCTTTGTTGCACCGTGTTGTTCATaGTCTCTCCTGTGCTCTCCA | + |
Preference number: 4 (lower is better) Translates to: TCMSRCPELVHRDRRGFVAPCCS*SLLCSP Trigger: TGGAGAGCACAGGAGAGATCATGAACAACACGGTGC...AACAAAGCCTCTTCTGTCTCTATGGACCAGCTCTGGACACCTGCTCATGCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | TGCCCTAGGCCTATATGCCCTCTGTCTTTGGCACAATGTCTCTATGTTTCTGTATGTGAGGAGCCATCCTaGCCCCGGATGACGTGTGCA | + |
Preference number: 4 (lower is better) Translates to: CPRPICPLSLAQCLYVSVCEEPS*PRMTCA Trigger: TGCACACGTCATCCGGGGTCAGGATGGCTCCTCACA...TACAGAAACATAGAGACATTGTGCCAAAGACAGAGGGCATATAGGCCTAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | TATATCCCAGGCTCTAGGAAACACTGGAAGCATCAAGTTACCCAGGCTAGAGCTCAGTTCTCCACTGGCTaGCCCAATCTCCTGCTGCAG | + |
Preference number: 4 (lower is better) Translates to: YIPGSRKHWKHQVTQARAQFSTG*PNLLLQ Trigger: CTGCAGCAGGAGATTGGGGCAGCCAGTGGAGAACTG...AGCTCTAGCCTGGGTAACTTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | CATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCGCGATGCCCGGGTCTTaGGTTCCAGTTCTCCACTGG | + |
Preference number: 4 (lower is better) Translates to: HQVTQARALCMSQPHSYSAMPGS*VPVLHW Trigger: CCAGTGGAGAACTGGAACCCAAGACCCGGGCATCGC...GGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | CTCCCAGCCAGTTCTTTTCTCTTGACCAAGGAACAGTTGAGACGGAAGGCACCTCCCCCAGTGAGCGAATaGACAGGTCTTTGGCAGAAA | + |
Preference number: 4 (lower is better) Translates to: LPASSFLLTKEQLRRKAPPPVSE*TGLWQK Trigger: TTTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG...AGGTGCCTTCCGTCTCAACTGTTCCTTGGTCAAGAGAAAAGAACTGGCTGGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | GAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACGCCTCTGAAATGAGTGGATaGACTGTGGAGGATACCCCA | + |
Preference number: 4 (lower is better) Translates to: ELAVDRKVQETAVEGLNASEMSG*TVEDTP Trigger: TGGGGTATCCTCCACAGTCCATCCACTCATTTCAGA...GGCGTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | AAGCATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACCTGACCCAGGTGCCTTaGGGGAAACCTCCCACAGGC | + |
Preference number: 4 (lower is better) Translates to: KHQVTQARALCMSQPHSYLTQVP*GKPPTG Trigger: GCCTGTGGGAGGTTTCCCCCAAGGCACCTGGGTCAG...GTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | CATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCCACACTTCTCCTCGGTaGCAGACTCTGTGCCCTTCC | + |
Preference number: 4 (lower is better) Translates to: HQVTQARALCMSQPHSYSHTSPR*QTLCPS Trigger: GGAAGGGCACAGAGTCTGTCACCGAGGAGAAGTGTG...GGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | GAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTGGAAGCATCAAAAACCTCCCACAGGCTaGGTTAGGCAGCTGTCCTCT | + |
Preference number: 4 (lower is better) Translates to: EVCIPTYIPGSRKHWKHQKPPTG*VRQLSS Trigger: AGAGGACAGCTGCCTAACTCAGCCTGTGGGAGGTTT...TTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | CAGTTGTATCACATTCGAGCATTAACACCCCACTCATCCCTTTGCACCCAGTGCTCCAAGGTGCTGATGTaGGGCAAGATGCTGTTTCCC | + |
Preference number: 4 (lower is better) Translates to: QLYHIRALTPHSSLCTQCSKVLM*GKMLFP Trigger: GGGAAACAGCATCTTGCCGCACATCAGCACCTTGGA...GCACTGGGTGCAAAGGGATGAGTGGGGTGTTAATGCTCGAATGTGATACAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | CTCCCAGCCAGTTCTTTTCTCTTGACCAAGGAACAGTTGAGACGGAAGGCACCTAACTTGAGTTCTTCCTaGTTCCGATGGAAGGGCCCT | + |
Preference number: 4 (lower is better) Translates to: LPASSFLLTKEQLRRKAPNLSSS*FRWKGP Trigger: AGGGCCCTTCCATCGGAAGCAGGAAGAACTCAAGTT...AGGTGCCTTCCGTCTCAACTGTTCCTTGGTCAAGAGAAAAGAACTGGCTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | AGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATGTTCTGTGCGGTCAAGGAACTCCCAGGGCTaGCTCTCCAGCCAGTCAGCC | + |
Preference number: 4 (lower is better) Translates to: RYVKVTLAKAEDTCSVRSRNSQG*LSSQSA Trigger: GGCTGACTGGCTGGAGAGCCAGCCCTGGGAGTTCCT...TGACCGCACAGAACATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | GAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTGGAAGCATCAAGAAGACGCTGGACTGTaGCAGAAAGTAGGGCACTGG | + |
Preference number: 4 (lower is better) Translates to: EVCIPTYIPGSRKHWKHQEDAGL*QKVGHW Trigger: CCAGTGCCCTACTTTCTGCCACAGTCCAGCGTCTTC...TTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | TATATCCCAGGCTCTAGGAAACACTGGAAGCATCAAGTTACCCAGGCTAGAGCTGGAGTAGGAAGGGGCTaGTCCCTTTCCACAGTCATC | + |
Preference number: 4 (lower is better) Translates to: YIPGSRKHWKHQVTQARAGVGRG*SLSTVI Trigger: GATGACTGTGGAAAGGGACCAGCCCCTTCCTACTCC...AGCTCTAGCCTGGGTAACTTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | GAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTGGAAGCATCAATTGCCCATAAGGAGATaGTTGCAGGAGGGGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: EVCIPTYIPGSRKHWKHQLPIRR*LQEGLA Trigger: AGCCAGCCCCTCCTGCAACCATCTCCTTATGGGCAA...TTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CAA 72 bp | CATACACCACATGGTCTCCCAGCCAGTTCTTTTCTCTaGACCAAGGAACAGTTGAGACGGAAGGCACCTGCA | + |
Preference number: 4 (lower is better) Translates to: HTPHGLPASSFL*TKEQLRRKAPA Trigger: TGCAGGTGCCTTCCGTCTCAACTGTTCCTTGGTCAAGAGAAAAGAACTGGCTGGGAGACCATGTGGTGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | AGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCCCAAATGATACTGGGTACATGTCTTCACTaGCCCAGGTGCCTTGGGGGA | + |
Preference number: 4 (lower is better) Translates to: RLELYACHSHIVTPQMILGTCLH*PRCLGG Trigger: TCCCCCAAGGCACCTGGGTCAGTGAAGACATGTACC...CAGTATCATTTGGGGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | GAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTGGAAGCATCAACCAGTCTTAGCCCCTTaGTGCAGAGATTCTCGGAGA | + |
Preference number: 4 (lower is better) Translates to: EVCIPTYIPGSRKHWKHQPVLAP*CRDSRR Trigger: TCTCCGAGAATCTCTGCAGCAAGGGGCTAAGACTGG...TTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | AGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATGTTCTGTGCGGTCAGGGTGTGCCATTCCCTaGCAGCTGTTGCTGCCGCTT | + |
Preference number: 4 (lower is better) Translates to: RYVKVTLAKAEDTCSVRSGCAIP*QLLLPL Trigger: AAGCGGCAGCAACAGCTGGCAGGGAATGGCACACCC...TGACCGCACAGAACATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | AGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCCCAAATGATACTGAGAACCTGCGGGGGCTaGTTCTCCACCAGGAAAGAG | + |
Preference number: 4 (lower is better) Translates to: RLELYACHSHIVTPQMILRTCGG*FSTRKE Trigger: CTCTTTCCTGGTGGAGAAGCAGCCCCCGCAGGTTCT...CAGTATCATTTGGGGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | GAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTGGAAGCATCAAGAGGTCCCTAGAAACTaGAGACCCAGCAGGAATCGA | + |
Preference number: 4 (lower is better) Translates to: EVCIPTYIPGSRKHWKHQEVPRN*RPSRNR Trigger: TCGATTCCTGCTGGGTCTGCAGTTTCTAGGGACCTC...TTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | AGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATGTTCTGTGCGGTCATCCCCTGCAGCATGGTaGCCAGGTCCTCACTTGGAC | + |
Preference number: 4 (lower is better) Translates to: RYVKVTLAKAEDTCSVRSSPAAW*PGPHLD Trigger: GTCCAAGTGAGGACCTGGCCACCATGCTGCAGGGGA...TGACCGCACAGAACATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | ACCTGCATGAGCAGGTGTCCAGAGCTGGTCCATAGAGACAGAAGAGGCTTTGTTAATCGAACCCCAGCCTaGAACTTAGTCTGTGTCTTC | + |
Preference number: 4 (lower is better) Translates to: TCMSRCPELVHRDRRGFVNRTPA*NLVCVF Trigger: GAAGACACAGACTAAGTTCCAGGCTGGGGTTCGATT...AACAAAGCCTCTTCTGTCTCTATGGACCAGCTCTGGACACCTGCTCATGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | CAGAGCACAGCAGTTCCATACACCACATGGTCTCCCAGCCAGTTCTTTTCTCTTTCGTTGAAGATCTTCTaGGCGAGGAACAGGAAGTGC | + |
Preference number: 4 (lower is better) Translates to: QSTAVPYTTWSPSQFFSLSLKIF*ARNRKC Trigger: GCACTTCCTGTTCCTCGCCCAGAAGATCTTCAACGA...AAGAGAAAAGAACTGGCTGGGAGACCATGTGGTGTATGGAACTGCTGTGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | ACCTGCATGAGCAGGTGTCCAGAGCTGGTCCATAGAGACAGAAGAGGCTTTGTTATGGCAGTACACTCATaGACTCTTCTAGGCTCTGAA | + |
Preference number: 4 (lower is better) Translates to: TCMSRCPELVHRDRRGFVMAVHS*TLLGSE Trigger: TTCAGAGCCTAGAAGAGTCCATGAGTGTACTGCCAT...AACAAAGCCTCTTCTGTCTCTATGGACCAGCTCTGGACACCTGCTCATGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | AGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCCCAAATGATACTGGACACAGCATGTTCCTaGGACTGGCACTGCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: RLELYACHSHIVTPQMILDTACS*DWHCSR Trigger: TCTGCTGCAGTGCCAGTCCCAGGAACATGCTGTGTC...CAGTATCATTTGGGGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | TGCCCTAGGCCTATATGCCCTCTGTCTTTGGCACAATGTCTCTATGTTTCTGTACATCTGAGCAAAGCATaGGTTCAGGGCTGGACACAG | + |
Preference number: 4 (lower is better) Translates to: CPRPICPLSLAQCLYVSVHLSKA*VQGWTQ Trigger: CTGTGTCCAGCCCTGAACCCATGCTTTGCTCAGATG...TACAGAAACATAGAGACATTGTGCCAAAGACAGAGGGCATATAGGCCTAGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CAA 72 bp | TCTGTCTTTGGCACAATGTCTCTATGTTTCTGTATGTaGAGTCCCAGGCCCTGGCTCAACACAGTTCTGGTG | + |
Preference number: 4 (lower is better) Translates to: SVFGTMSLCFCM*SPRPWLNTVLV Trigger: CACCAGAACTGTGTTGAGCCAGGGCCTGGGACTCAACATACAGAAACATAGAGACATTGTGCCAAAGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | GAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTGGAAGCATCAATTGGACCAGGACCATTaGCAGGAGGGTCTATCAAAT | + |
Preference number: 4 (lower is better) Translates to: EVCIPTYIPGSRKHWKHQLDQDH*QEGLSN Trigger: ATTTGATAGACCCTCCTGTCAATGGTCCTGGTCCAA...TTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | AGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATGTTCTGTGCGGTCATGTTGGGGCCCAATGTaGAGCTCGTGGAGAAGAGCA | + |
Preference number: 4 (lower is better) Translates to: RYVKVTLAKAEDTCSVRSCWGPM*SSWRRA Trigger: TGCTCTTCTCCACGAGCTTCACATTGGGCCCCAACA...TGACCGCACAGAACATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | TGTCTCAGCCTTTCAGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATGGGCCTGAAGCTGGATaGGAAGTTTGTTGGGGCCCA | + |
Preference number: 4 (lower is better) Translates to: CLSLSDMLRSHWQKQKIHGPEAG*EVCWGP Trigger: TGGGCCCCAACAAACTTCTCATCCAGCTTCAGGCCC...ATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCTGAAAGGCTGAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | AGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATGTTCTGTGCGGTCAGGAGACAGCGTTTGGTaGGGTCCAGGACACCATCAA | + |
Preference number: 4 (lower is better) Translates to: RYVKVTLAKAEDTCSVRSGDSVW*GPGHHQ Trigger: TTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCC...TGACCGCACAGAACATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | AAGCATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCTCCTCAAAGGGTGTaGCATTCCCTGCCAGCTGTT | + |
Preference number: 4 (lower is better) Translates to: KHQVTQARALCMSQPHSYSPQRV*HSLPAV Trigger: AACAGCTGGCAGGGAATGGCACACCCTTTGAGGAGA...GTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | TGCCCTAGGCCTATATGCCCTCTGTCTTTGGCACAATGTCTCTATGTTTCTGTATTGTCTTGGTTACCATaGACGATGACCACCAAGGGC | + |
Preference number: 4 (lower is better) Translates to: CPRPICPLSLAQCLYVSVLSWLP*TMTTKG Trigger: GCCCTTGGTGGTCATCGTGCATGGTAACCAAGACAA...TACAGAAACATAGAGACATTGTGCCAAAGACAGAGGGCATATAGGCCTAGGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | GGACAGAGCACAGCAGTTCCATACACCACATGGTCTCCCAGCCAGTTCTTTTCTGTCTTTGGCAGAAAATaGCTGGATGTTCTCTATCTG | + |
Preference number: 4 (lower is better) Translates to: GQSTAVPYTTWSPSQFFSVFGRK*LDVLYL Trigger: CAGATAGAGAACATCCAGCCATTTTCTGCCAAAGAC...AGAAAAGAACTGGCTGGGAGACCATGTGGTGTATGGAACTGCTGTGCTCTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | GAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTGGAAGCATCAAGGAAAGCCTCATCTTTaGGTTTCTTGGGGTAGAGGT | + |
Preference number: 4 (lower is better) Translates to: EVCIPTYIPGSRKHWKHQGKPHL*VSWGRG Trigger: ACCTCTACCCCAAGAAACCCAAAGATGAGGCTTTCC...TTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | CATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCGCTGGTCAAAGGGCATaGTTATCTGGCTCATGTTGG | + |
Preference number: 4 (lower is better) Translates to: HQVTQARALCMSQPHSYSAGQRA*LSGSCW Trigger: CCAACATGAGCCAGATAACCATGCCCTTTGACCAGC...GGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | AGAGCTTTATGCATGTCACAGCCACATAGTTACTCCCCAAATGATACTGGGTTGGTCCTTAGGTCCAGGTaGGACAGTGAGATCCCTGAT | + |
Preference number: 4 (lower is better) Translates to: RALCMSQPHSYSPNDTGLVLRSR*DSEIPD Trigger: ATCAGGGATCTCACTGTCCCACCTGGACCTAAGGAC...CAACCCAGTATCATTTGGGGAGTAACTATGTGGCTGTGACATGCATAAAGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | CATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCCTTGAAGTATTTGTCTaGTGGTGGCCACCAGCTTCA | + |
Preference number: 4 (lower is better) Translates to: HQVTQARALCMSQPHSYSLEVFV*WWPPAS Trigger: TGAAGCTGGTGGCCACCATCAGACAAATACTTCAAG...GGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | TGTCTCAGCCTTTCAGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATTCCCTTACTCGATGCTaGAGCCTTCCGAGGGCTGTA | + |
Preference number: 4 (lower is better) Translates to: CLSLSDMLRSHWQKQKIHSLTRC*SLPRAV Trigger: TACAGCCCTCGGAAGGCTTCAGCATCGAGTAAGGGA...ATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCTGAAAGGCTGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | TGTCTCAGCCTTTCAGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATTCACCATGTCAGCTCTaGCCATTGGAGGCTTGGCTG | + |
Preference number: 4 (lower is better) Translates to: CLSLSDMLRSHWQKQKIHSPCQL*PLEAWL Trigger: CAGCCAAGCCTCCAATGGTCAGAGCTGACATGGTGA...ATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCTGAAAGGCTGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | CTATACACAAGCTTAGCTCTTAGAATGCAGTCTCAAATGTCACTAGGCATCTTTTCAGGAGCAGGTTCTTaGACAGGGCGGAGCAGCAGT | + |
Preference number: 4 (lower is better) Translates to: LYTSLALRMQSQMSLGIFSGAGS*TGRSSS Trigger: ACTGCTGCTCCGCCCTGTTCAAGAACCTGCTCCTGA...AAAGATGCCTAGTGACATTTGAGACTGCATTCTAAGAGCTAAGCTTGTGTATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR TCA 90 bp | TGCCCTAGGCCTATATGCCCTCTGTCTTTGGCACAATGTCTCTATGTTTCTGTAGACTCTTCTAGGCTCTaGAATGAGTGGATGGACTGT | + |
Preference number: 4 (lower is better) Translates to: CPRPICPLSLAQCLYVSVDSSRL*NEWMDC Trigger: ACAGTCCATCCACTCATTTCAGAGCCTAGAAGAGTC...TACAGAAACATAGAGACATTGTGCCAAAGACAGAGGGCATATAGGCCTAGGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | CTATACACAAGCTTAGCTCTTAGAATGCAGTCTCAAATGTCACTAGGCATCTTTACCCCGGATGACGTGTaGAATGGTGATGCCCCCGAT | + |
Preference number: 4 (lower is better) Translates to: LYTSLALRMQSQMSLGIFTPDDV*NGDAPD Trigger: ATCGGGGGCATCACCATTGCACACGTCATCCGGGGT...AAAGATGCCTAGTGACATTTGAGACTGCATTCTAAGAGCTAAGCTTGTGTATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | AGAGCTTTATGCATGTCACAGCCACATAGTTACTCCCCAAATGATACTGGGTTGATATCTGAGCTGAGTTaGATGGAAGCATCAGGGGCC | + |
Preference number: 4 (lower is better) Translates to: RALCMSQPHSYSPNDTGLISELS*MEASGA Trigger: GGCCCCTGATGCTTCCATGCAACTCAGCTCAGATAT...CAACCCAGTATCATTTGGGGAGTAACTATGTGGCTGTGACATGCATAAAGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | CATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCAGGCTCCTGAAAAGATaGCAGTACACTCATGGACTC | + |
Preference number: 4 (lower is better) Translates to: HQVTQARALCMSQPHSYSRLLKR*QYTHGL Trigger: GAGTCCATGAGTGTACTGCCATCTTTTCAGGAGCCT...GGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | AAGCATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTTATCTGGCTCATGTTaGGGGGCATTTGCAGGTGAG | + |
Preference number: 4 (lower is better) Translates to: KHQVTQARALCMSQPHSYLSGSC*GAFAGE Trigger: CTCACCTGCAAATGCCCCCCAACATGAGCCAGATAA...GTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | CATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCCAGAAAGTAGGGCACTaGCCATGTTGTAACAGAAAG | + |
Preference number: 4 (lower is better) Translates to: HQVTQARALCMSQPHSYSQKVGH*PCCNRK Trigger: CTTTCTGTTACAACATGGCCAGTGCCCTACTTTCTG...GGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | CATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCGAATGGACAGGTCTTTaGCAGAAAATGGCTGGATGT | + |
Preference number: 4 (lower is better) Translates to: HQVTQARALCMSQPHSYSEWTGL*QKMAGC Trigger: ACATCCAGCCATTTTCTGCCAAAGACCTGTCCATTC...GGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CCA 90 bp | CTATACACAAGCTTAGCTCTTAGAATGCAGTCTCAAATGTCACTAGGCATCTTTCCAGGCTTAGTTCTCTaGCCTGTTTCTCTGTCACCA | + |
Preference number: 4 (lower is better) Translates to: LYTSLALRMQSQMSLGIFPGLVL*PVSLSP Trigger: TGGTGACAGAGAAACAGGCCAGAGAACTAAGCCTGG...AAAGATGCCTAGTGACATTTGAGACTGCATTCTAAGAGCTAAGCTTGTGTATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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3UTR CAA 72 bp | TCACAGCCACATAGTTACTCCCCAAATGATACTGGGTaGCTGTCTTATACAATGTCTCAGCCTTTCAGATAT | + |
Preference number: 4 (lower is better) Translates to: SQPHSYSPNDTG*LSYTMSQPFRY Trigger: ATATCTGAAAGGCTGAGACATTGTATAAGACAGCAACCCAGTATCATTTGGGGAGTAACTATGTGGCTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR GCA 90 bp | TGTCTCAGCCTTTCAGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATAGGCTAGTGACATATTaGTTACTAATAAAGCCAATG | + |
Preference number: 4 (lower is better) Translates to: CLSLSDMLRSHWQKQKIHRLVTY*LLIKPM Trigger: CATTGGCTTTATTAGTAAGCAATATGTCACTAGCCT...ATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCTGAAAGGCTGAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS GCA 90 bp | CGATGGAAGGGCCCTGGCAGGTGGCGGAACTCCAAGGTGCTGATGTaGGGCAAGATGCTGTTTCCCTTCCCCTGCTCTCCAGCAGTGGCC | + |
Preference number: 5 (lower is better) Translates to: RWKGPGRWRNSKVLM*GKMLFPFPCSPAVA Trigger: GGCCACTGCTGGAGAGCAGGGGAAGGGAAACAGCATCTTGCCGCACATCAGCACCTTGGAGTTCCGCCACCTGCCAGGGCCCTTCCATCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120279.2 |
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CDS TCA 90 bp | AGCAGTTGCTGGGAATGCTGTTCTCCAGGGGCACCGTGTTGTTCATaGTCTCTCCTGTGCTCTCCACTCCAGTCCCGGGCCCCTGGGCCA | + |
Preference number: 5 (lower is better) Translates to: SSCWECCSPGAPCCS*SLLCSPLQSRAPGP Trigger: TGGCCCAGGGGCCCGGGACTGGAGTGGAGAGCACAGGAGAGATCATGAACAACACGGTGCCCCTGGAGAACAGCATTCCCAGCAACTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 90 bp | GGTCCTGTTCAGTGGGAGGCATCAGGGGAGGGTACATGTCTTCACTaGCCCAGGTGCCTTGGGGGAAACCTCCCACAGGCTGAGTTAGGC | + |
Preference number: 5 (lower is better) Translates to: GPVQWEASGEGTCLH*PRCLGGNLPQAELG Trigger: GCCTAACTCAGCCTGTGGGAGGTTTCCCCCAAGGCACCTGGGTCAGTGAAGACATGTACCCTCCCCTGATGCCTCCCACTGAACAGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 90 bp | TGCGGCAAGATGCTGTTTCCCTTCCCCTGCTCTCCAGCAGTGGCCTaGAGACGCTGGACTGTGGCAGAAAGTAGGGCACTGGCCATGTTG | + |
Preference number: 5 (lower is better) Translates to: CGKMLFPFPCSPAVA*RRWTVAESRALAML Trigger: CAACATGGCCAGTGCCCTACTTTCTGCCACAGTCCAGCGTCTTCAGGCCACTGCTGGAGAGCAGGGGAAGGGAAACAGCATCTTGCCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092074.12 ENSMUST00000120279.2 |
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CDS GCA 90 bp | GGTCACAAGGGTTCGCAGGACTTCATCCAGACGGCTTATCAGCGATaGCCGGGTCTTGGGTTCCAGTTCTCCACTGGCTGCCCCAATCTC | + |
Preference number: 5 (lower is better) Translates to: GHKGSQDFIQTAYQR*PGLGFQFSTGCPNL Trigger: GAGATTGGGGCAGCCAGTGGAGAACTGGAACCCAAGACCCGGGCATCGCTGATAAGCCGTCTGGATGAAGTCCTGCGAACCCTTGTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 90 bp | TTCGCAGGACTTCATCCAGACGGCTTATCAGCGATGCCCGGGTCTTaGGTTCCAGTTCTCCACTGGCTGCCCCAATCTCCTGCTGCAGCT | + |
Preference number: 5 (lower is better) Translates to: FAGLHPDGLSAMPGS*VPVLHWLPQSPAAA Trigger: AGCTGCAGCAGGAGATTGGGGCAGCCAGTGGAGAACTGGAACCCAAGACCCGGGCATCGCTGATAAGCCGTCTGGATGAAGTCCTGCGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS GCA 90 bp | ACCCCAGCCTGGAACTTAGTCTGTGTCTTCAGAACCTGCGGGGGCTaGTTCTCCACCAGGAAAGAGCTGGTCACAAGGGTTCGCAGGACT | + |
Preference number: 5 (lower is better) Translates to: TPAWNLVCVFRTCGG*FSTRKELVTRVRRT Trigger: AGTCCTGCGAACCCTTGTGACCAGCTCTTTCCTGGTGGAGAAGCAGCCCCCGCAGGTTCTGAAGACACAGACTAAGTTCCAGGCTGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS GCA 90 bp | CTGAGGCTGTTGTCGTTGAAGATCTTCTGGGCGAGGAACAGGAAGTaGTCTGGAAGCAGTCCCCGGCTGGTCCCCACCTCAGCCATAAAC | + |
Preference number: 5 (lower is better) Translates to: LRLLSLKIFWARNRK*SGSSPRLVPTSAIN Trigger: GTTTATGGCTGAGGTGGGGACCAGCCGGGGACTGCTTCCAGAGCACTTCCTGTTCCTCGCCCAGAAGATCTTCAACGACAACAGCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 90 bp | CAGGTCCCCCACAGTCCCCTGCAGCATGGTGGCCAGGTCCTCACTTaGACCAGGACCATTGACAGGAGGGTCTATCAAATTCTGCAGAGA | + |
Preference number: 5 (lower is better) Translates to: QVPHSPLQHGGQVLT*TRTIDRRVYQILQR Trigger: TCTCTGCAGAATTTGATAGACCCTCCTGTCAATGGTCCTGGTCCAAGTGAGGACCTGGCCACCATGCTGCAGGGGACTGTGGGGGACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 90 bp | AGCCTTCCGAGGGCTGTAGTAAACTTGAGTTCTTCCTGCTTCCGATaGAAGGGCCCTGGCAGGTGGCGGAACTCCAAGGTGCTGATGTGC | + |
Preference number: 5 (lower is better) Translates to: SLPRAVVNLSSSCFR*KGPGRWRNSKVLMC Trigger: GCACATCAGCACCTTGGAGTTCCGCCACCTGCCAGGGCCCTTCCATCGGAAGCAGGAAGAACTCAAGTTTACTACAGCCCTCGGAAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120279.2 |
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CDS GCA 90 bp | TTTCACACCTCTCCTGCAGCCCTGCTAGGCTCTCCTCAAAGGGTGTaGCATTCCCTGCCAGCTGTTGCTGCCGCTTCCAAATCTGAATCC | + |
Preference number: 5 (lower is better) Translates to: FHTSPAALLGSPQRV*HSLPAVAAASKSES Trigger: GGATTCAGATTTGGAAGCGGCAGCAACAGCTGGCAGGGAATGGCACACCCTTTGAGGAGAGCCTAGCAGGGCTGCAGGAGAGGTGTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS GCA 90 bp | GCTTATCAGCGATGCCCGGGTCTTGGGTTCCAGTTCTCCACTGGCTaGCCCAATCTCCTGCTGCAGCTGGGAATAAATTTCCACCAGGCT | + |
Preference number: 5 (lower is better) Translates to: AYQRCPGLGFQFSTG*PNLLLQLGINFHQA Trigger: AGCCTGGTGGAAATTTATTCCCAGCTGCAGCAGGAGATTGGGGCAGCCAGTGGAGAACTGGAACCCAAGACCCGGGCATCGCTGATAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 90 bp | GCTGTTGTCGTTGAAGATCTTCTGGGCGAGGAACAGGAAGTGCTCTaGAAGCAGTCCCCGGCTGGTCCCCACCTCAGCCATAAACTTGAG | + |
Preference number: 5 (lower is better) Translates to: AVVVEDLLGEEQEVL*KQSPAGPHLSHKLE Trigger: CTCAAGTTTATGGCTGAGGTGGGGACCAGCCGGGGACTGCTTCCAGAGCACTTCCTGTTCCTCGCCCAGAAGATCTTCAACGACAACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 90 bp | GTAAACTTGAGTTCTTCCTGCTTCCGATGGAAGGGCCCTGGCAGGTaGCGGAACTCCAAGGTGCTGATGTGCGGCAAGATGCTGTTTCCC | + |
Preference number: 5 (lower is better) Translates to: VNLSSSCFRWKGPGR*RNSKVLMCGKMLFP Trigger: GGGAAACAGCATCTTGCCGCACATCAGCACCTTGGAGTTCCGCCACCTGCCAGGGCCCTTCCATCGGAAGCAGGAAGAACTCAAGTTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120279.2 |
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CDS CCA 90 bp | GGCTGTAGTAAACTTGAGTTCTTCCTGCTTCCGATGGAAGGGCCCTaGCAGGTGGCGGAACTCCAAGGTGCTGATGTGCGGCAAGATGCT | + |
Preference number: 5 (lower is better) Translates to: GCSKLEFFLLPMEGP*QVAELQGADVRQDA Trigger: AGCATCTTGCCGCACATCAGCACCTTGGAGTTCCGCCACCTGCCAGGGCCCTTCCATCGGAAGCAGGAAGAACTCAAGTTTACTACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120279.2 |
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CDS-3UTR CAA 90 bp | GCAGAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACCTCCGGAGACAGCGTTaGGTGAGGTCCAGGACACCA | + |
Preference number: 5 (lower is better) Translates to: AELAVDRKVQETAVEGLNLRRQR*VRSRTP Trigger: TGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAG...GTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 90 bp | CCAAAATGTGAAGCCTCGGCCCAGCAGGATCTCCTTATTGAACTGTaGCCAGGACACACAGCGGTGCTGAAAGGCCTCCACACTGAGGCT | + |
Preference number: 5 (lower is better) Translates to: PKCEASAQQDLLIEL*PGHTAVLKGLHTEA Trigger: AGCCTCAGTGTGGAGGCCTTTCAGCACCGCTGTGTGTCCTGGTCACAGTTCAATAAGGAGATCCTGCTGGGCCGAGGCTTCACATTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 90 bp | TCCCCTGCAGCATGGTGGCCAGGTCCTCACTTGGACCAGGACCATTaGCAGGAGGGTCTATCAAATTCTGCAGAGACACTTGTCCAGTCT | + |
Preference number: 5 (lower is better) Translates to: SPAAWWPGPHLDQDH*QEGLSNSAETLVQS Trigger: AGACTGGACAAGTGTCTCTGCAGAATTTGATAGACCCTCCTGTCAATGGTCCTGGTCCAAGTGAGGACCTGGCCACCATGCTGCAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 90 bp | TCTTGGTTACCATGCACGATGACCACCAAGGGCAGAGACAGGGCCTaGAGCTGGATGAGAAGTTTGTTGGGGCCCAATGTGAAGCTCGTG | + |
Preference number: 5 (lower is better) Translates to: SWLPCTMTTKGRDRA*SWMRSLLGPNVKLV Trigger: CACGAGCTTCACATTGGGCCCCAACAAACTTCTCATCCAGCTTCAGGCCCTGTCTCTGCCCTTGGTGGTCATCGTGCATGGTAACCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 90 bp | ATGTCTTCACTGACCCAGGTGCCTTGGGGGAAACCTCCCACAGGCTaGGTTAGGCAGCTGTCCTCTACCATAGTCACATCTGAGCAAAGC | + |
Preference number: 5 (lower is better) Translates to: MSSLTQVPWGKPPTG*VRQLSSTIVTSEQS Trigger: GCTTTGCTCAGATGTGACTATGGTAGAGGACAGCTGCCTAACTCAGCCTGTGGGAGGTTTCCCCCAAGGCACCTGGGTCAGTGAAGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS GCA 90 bp | ATGTCAGCTCTGACCATTGGAGGCTTGGCTGAGGTCCCTAGAAACTaGAGACCCAGCAGGAATCGAACCCCAGCCTGGAACTTAGTCTGT | + |
Preference number: 5 (lower is better) Translates to: MSALTIGGLAEVPRN*RPSRNRTPAWNLVC Trigger: ACAGACTAAGTTCCAGGCTGGGGTTCGATTCCTGCTGGGTCTGCAGTTTCTAGGGACCTCAGCCAAGCCTCCAATGGTCAGAGCTGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 90 bp | CAAGATCCCGGATCCGGTCCCCCAGTGAGCGAATGGACAGGTCTTTaGCAGAAAATGGCTGGATGTTCTCTATCTGTGAGGAGCCATCCT | + |
Preference number: 5 (lower is better) Translates to: QDPGSGPPVSEWTGL*QKMAGCSLSVRSHP Trigger: AGGATGGCTCCTCACAGATAGAGAACATCCAGCCATTTTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGGATCCGGGATCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | GCAGAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACCTGACCATTGGAGGCTaGGCTGAGGTCCCTAGAAAC | + |
Preference number: 5 (lower is better) Translates to: AELAVDRKVQETAVEGLNLTIGG*AEVPRN Trigger: GTTTCTAGGGACCTCAGCCAAGCCTCCAATGGTCAG...GTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | GCAGAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACTCCAGGGGCACCGTGTaGTTCATGATCTCTCCTGTG | + |
Preference number: 5 (lower is better) Translates to: AELAVDRKVQETAVEGLNSRGTV*FMISPV Trigger: CACAGGAGAGATCATGAACAACACGGTGCCCCTGGA...GTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | GAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACGCCGTCCCATCTGGCTCATaGAGGAGAAGGCTAGTGACA | + |
Preference number: 5 (lower is better) Translates to: ELAVDRKVQETAVEGLNAVPSGS*RRRLVT Trigger: TGTCACTAGCCTTCTCCTCAATGAGCCAGATGGGAC...GGCGTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | GAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTGGAAGCATCAAACTGACCCAGGTGCCTaGGGGGAAACCTCCCACAGG | + |
Preference number: 5 (lower is better) Translates to: EVCIPTYIPGSRKHWKHQTDPGA*GETSHR Trigger: CCTGTGGGAGGTTTCCCCCAAGGCACCTGGGTCAGT...TTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | GAGCTGGCAGTGGACAGAAAAGTACAAGAGACAGCAGTTGAGGGCCTCAACGCCTTCTCCAGGAGAAGCTaGGTGAGGTCCTGTTCAGTG | + |
Preference number: 5 (lower is better) Translates to: ELAVDRKVQETAVEGLNAFSRRS*VRSCSV Trigger: CACTGAACAGGACCTCACCAAGCTTCTCCTGGAGAA...GGCGTTGAGGCCCTCAACTGCTGTCTCTTGTACTTTTCTGTCCACTGCCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | CAGAGCACAGCAGTTCCATACACCACATGGTCTCCCAGCCAGTTCTTTTCTCTTCCCATAAGGAGATGGTaGCAGGAGGGGCTGGCTTCC | + |
Preference number: 5 (lower is better) Translates to: QSTAVPYTTWSPSQFFSLPIRRW*QEGLAS Trigger: GGAAGCCAGCCCCTCCTGCAACCATCTCCTTATGGG...AAGAGAAAAGAACTGGCTGGGAGACCATGTGGTGTATGGAACTGCTGTGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 90 bp | TGCTGCAGAGATTCTCGGAGAAGCCGGGTCTCCCTTACTCGATGCTaGAGCCTTCCGAGGGCTGTAGTAAACTTGAGTTCTTCCTGCTTC | + |
Preference number: 5 (lower is better) Translates to: CCRDSRRSRVSLTRC*SLPRAVVNLSSSCF Trigger: GAAGCAGGAAGAACTCAAGTTTACTACAGCCCTCGGAAGGCTTCAGCATCGAGTAAGGGAGACCCGGCTTCTCCGAGAATCTCTGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS GCA 90 bp | GGGTCTATCAAATTCTGCAGAGACACTTGTCCAGTCTTAGCCCCTTaGTGCAGAGATTCTCGGAGAAGCCGGGTCTCCCTTACTCGATGC | + |
Preference number: 5 (lower is better) Translates to: GSIKFCRDTCPVLAP*CRDSRRSRVSLTRC Trigger: GCATCGAGTAAGGGAGACCCGGCTTCTCCGAGAATCTCTGCAGCAAGGGGCTAAGACTGGACAAGTGTCTCTGCAGAATTTGATAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 90 bp | AGCAGGATCTCCTTATTGAACTGTGACCAGGACACACAGCGGTGCTaGAAGGCCTCCACACTGAGGCTGTTGTCGTTGAAGATCTTCTGG | + |
Preference number: 5 (lower is better) Translates to: SRISLLNCDQDTQRC*KASTLRLLSLKIFW Trigger: CCAGAAGATCTTCAACGACAACAGCCTCAGTGTGGAGGCCTTTCAGCACCGCTGTGTGTCCTGGTCACAGTTCAATAAGGAGATCCTGCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 90 bp | AGCCTTCCGAGGGCTGTAGTAAACTTGAGTTCTTCCTGCTTCCGATaGAAGGGCCCTGGCAGGTGGCGGAACTCTTCTATAACAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: SLPRAVVNLSSSCFR*KGPGRWRNSSITAF Trigger: AAAAGCTGTTATAGAAGAGTTCCGCCACCTGCCAGGGCCCTTCCATCGGAAGCAGGAAGAACTCAAGTTTACTACAGCCCTCGGAAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | TGCCCTAGGCCTATATGCCCTCTGTCTTTGGCACAATGTCTCTATGTTTCTGTAAGGGCGGAGCAGCAGTaGCTGGGAATGCTGTTCTCC | + |
Preference number: 5 (lower is better) Translates to: CPRPICPLSLAQCLYVSVRAEQQ*LGMLFS Trigger: GGAGAACAGCATTCCCAGCAACTGCTGCTCCGCCCT...TACAGAAACATAGAGACATTGTGCCAAAGACAGAGGGCATATAGGCCTAGGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | TGCCCTAGGCCTATATGCCCTCTGTCTTTGGCACAATGTCTCTATGTTTCTGTAATTCCCTGCCAGCTGTaGCTGCCGCTTCCAAATCTG | + |
Preference number: 5 (lower is better) Translates to: CPRPICPLSLAQCLYVSVIPCQL*LPLPNL Trigger: CAGATTTGGAAGCGGCAGCAACAGCTGGCAGGGAAT...TACAGAAACATAGAGACATTGTGCCAAAGACAGAGGGCATATAGGCCTAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 90 bp | TCTGAAATGAGTGGATGGACTGTGGAGGATACCCCATATCTGAGCTaGGTTGCATGGAAGCATCAGGGGCCATTCCAAGATCATAAGGTG | + |
Preference number: 5 (lower is better) Translates to: SEMSGWTVEDTPYLS*VAWKHQGPFQDHKV Trigger: CACCTTATGATCTTGGAATGGCCCCTGATGCTTCCATGCAACTCAGCTCAGATATGGGGTATCCTCCACAGTCCATCCACTCATTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | TGCCCTAGGCCTATATGCCCTCTGTCTTTGGCACAATGTCTCTATGTTTCTGTACTCCCCTTGAAGTATTaGTCTGATGGTGGCCACCAG | + |
Preference number: 5 (lower is better) Translates to: CPRPICPLSLAQCLYVSVLPLKY*SDGGHQ Trigger: CTGGTGGCCACCATCAGACAAATACTTCAAGGGGAG...TACAGAAACATAGAGACATTGTGCCAAAGACAGAGGGCATATAGGCCTAGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | TGTCTCAGCCTTTCAGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATAGCGATGCCCGGGTCTaGGGTTCCAGTTCTCCACTG | + |
Preference number: 5 (lower is better) Translates to: CLSLSDMLRSHWQKQKIHSDARV*GSSSPL Trigger: CAGTGGAGAACTGGAACCCAAGACCCGGGCATCGCT...ATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCTGAAAGGCTGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | AGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATGTTCTGTGCGGTCATTCAGGAGCAGGTTCTaGAACAGGGCGGAGCAGCAG | + |
Preference number: 5 (lower is better) Translates to: RYVKVTLAKAEDTCSVRSFRSRF*NRAEQQ Trigger: CTGCTGCTCCGCCCTGTTCAAGAACCTGCTCCTGAA...TGACCGCACAGAACATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | AGGACAGAGCACAGCAGTTCCATACACCACATGGTCTCCCAGCCAGTTCTTTTCCATAGGATGGTAGCTTaGGCGTTGTTGTCTTGGTTA | + |
Preference number: 5 (lower is better) Translates to: RTEHSSSIHHMVSQPVLFHRMVA*ALLSWL Trigger: TAACCAAGACAACAACGCCAAAGCTACCATCCTATG...GAAAAGAACTGGCTGGGAGACCATGTGGTGTATGGAACTGCTGTGCTCTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | GAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTGGAAGCATCAAAGGGCTGTAGTAAACTaGAGTTCTTCCTGCTTCCGA | + |
Preference number: 5 (lower is better) Translates to: EVCIPTYIPGSRKHWKHQRAVVN*SSSCFR Trigger: TCGGAAGCAGGAAGAACTCAAGTTTACTACAGCCCT...TTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | CATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCAGCTGGATGAGAAGTTaGTTGGGGCCCAATGTGAAG | + |
Preference number: 5 (lower is better) Translates to: HQVTQARALCMSQPHSYSSWMRS*LGPNVK Trigger: CTTCACATTGGGCCCCAACAAACTTCTCATCCAGCT...GGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | GAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTGGAAGCATCAAATCTCAGAGAAGGCATaGTCCCATAGGATGGTAGCT | + |
Preference number: 5 (lower is better) Translates to: EVCIPTYIPGSRKHWKHQISEKA*SHRMVA Trigger: AGCTACCATCCTATGGGACAATGCCTTCTCTGAGAT...TTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | GAGGTCTGCATCCCTACTTATATCCCAGGCTCTAGGAAACACTGGAAGCATCAAAGCAGGATCTCCTTATaGAACTGTGACCAGGACACA | + |
Preference number: 5 (lower is better) Translates to: EVCIPTYIPGSRKHWKHQSRISL*NCDQDT Trigger: TGTGTCCTGGTCACAGTTCAATAAGGAGATCCTGCT...TTGATGCTTCCAGTGTTTCCTAGAGCCTGGGATATAAGTAGGGATGCAGACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | CATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCCGAATGGACAGGTCTTaGGCAGAAAATGGCTGGATG | + |
Preference number: 5 (lower is better) Translates to: HQVTQARALCMSQPHSYSRMDRS*AENGWM Trigger: CATCCAGCCATTTTCTGCCAAAGACCTGTCCATTCG...GGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | CTATACACAAGCTTAGCTCTTAGAATGCAGTCTCAAATGTCACTAGGCATCTTTCCCTCCTGCCTCCCCTaGGTTCTCCAGGAGAAGCTT | + |
Preference number: 5 (lower is better) Translates to: LYTSLALRMQSQMSLGIFPSCLP*VLQEKL Trigger: AAGCTTCTCCTGGAGAACCAAGGGGAGGCAGGAGGG...AAAGATGCCTAGTGACATTTGAGACTGCATTCTAAGAGCTAAGCTTGTGTATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | TGCCCTAGGCCTATATGCCCTCTGTCTTTGGCACAATGTCTCTATGTTTCTGTAGTCAACATAGAGCCGTaGCAGTTTTTCTGGGGACAT | + |
Preference number: 5 (lower is better) Translates to: CPRPICPLSLAQCLYVSVVNIEP*QFFWGH Trigger: ATGTCCCCAGAAAAACTGCAACGGCTCTATGTTGAC...TACAGAAACATAGAGACATTGTGCCAAAGACAGAGGGCATATAGGCCTAGGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | TGTCTCAGCCTTTCAGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATCTGAGGCTGTTGTCGTaGAAGATCTTCTGGGCGAGG | + |
Preference number: 5 (lower is better) Translates to: CLSLSDMLRSHWQKQKIHLRLLS*KIFWAR Trigger: CCTCGCCCAGAAGATCTTCAACGACAACAGCCTCAG...ATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCTGAAAGGCTGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | CATCAAGTTACCCAGGCTAGAGCTTTATGCATGTCACAGCCACATAGTTACTCCACCTCAGCCATAAACTaGAGGTTTAGGGTTTCACAC | + |
Preference number: 5 (lower is better) Translates to: HQVTQARALCMSQPHSYSTSAIN*RFRVSH Trigger: GTGTGAAACCCTAAACCTCAAGTTTATGGCTGAGGT...GGAGTAACTATGTGGCTGTGACATGCATAAAGCTCTAGCCTGGGTAACTTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | AGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATGTTCTGTGCGGTCATCCACACTGAGGCTGTaGTCGTTGAAGATCTTCTGG | + |
Preference number: 5 (lower is better) Translates to: RYVKVTLAKAEDTCSVRSSTLRL*SLKIFW Trigger: CCAGAAGATCTTCAACGACAACAGCCTCAGTGTGGA...TGACCGCACAGAACATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS-3UTR CAA 90 bp | TGTCTCAGCCTTTCAGATATGTTAAGGTCACACTGGCAAAAGCAGAAGATACATATGGTAGCTTTGGCGTaGTTGTCTTGGTTACCATGC | + |
Preference number: 5 (lower is better) Translates to: CLSLSDMLRSHWQKQKIHMVALA*LSWLPC Trigger: GCATGGTAACCAAGACAACAACGCCAAAGCTACCAT...ATGTATCTTCTGCTTTTGCCAGTGTGACCTTAACATATCTGAAAGGCTGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 72 bp | ATCTCTCCTGTGCTCTCCACTCCAGTCCCGGGCCCCTaGGCCAGGCTTAGTTCTCTGGCCTGTTTCTCTGTC | + |
Preference number: 6 (lower is better) Translates to: ISPVLSTPVPGP*ARLSSLACFSV Trigger: GACAGAGAAACAGGCCAGAGAACTAAGCCTGGCCCAGGGGCCCGGGACTGGAGTGGAGAGCACAGGAGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CAA 90 bp | GTTCGCAGGACTTCATCCAGACGGCTTATCAGCGATGCCCGGGTCTaGGGTTCCAGTTCTCCACTGGCTGCCCCAATCTCCTGCTGCAGC | + |
Preference number: 6 (lower is better) Translates to: VRRTSSRRLISDARV*GSSSPLAAPISCCS Trigger: GCTGCAGCAGGAGATTGGGGCAGCCAGTGGAGAACTGGAACCCAAGACCCGGGCATCGCTGATAAGCCGTCTGGATGAAGTCCTGCGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS GCA 72 bp | TCTCCTGCAGCCCTGCTAGGCTCTCCTCAAAGGGTGTaGCATTCCCTGCCAGCTGTTGCTGCCGCTTCCAAA | + |
Preference number: 6 (lower is better) Translates to: SPAALLGSPQRV*HSLPAVAAASK Trigger: TTTGGAAGCGGCAGCAACAGCTGGCAGGGAATGGCACACCCTTTGAGGAGAGCCTAGCAGGGCTGCAGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS GCA 72 bp | GGTTCGCAGGACTTCATCCAGACGGCTTATCAGCGATaGCCGGGTCTTGGGTTCCAGTTCTCCACTGGCTGC | + |
Preference number: 6 (lower is better) Translates to: GSQDFIQTAYQR*PGLGFQFSTGC Trigger: GCAGCCAGTGGAGAACTGGAACCCAAGACCCGGGCATCGCTGATAAGCCGTCTGGATGAAGTCCTGCGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 72 bp | GTTGAAGATCTTCTGGGCGAGGAACAGGAAGTGCTCTaGAAGCAGTCCCCGGCTGGTCCCCACCTCAGCCAT | + |
Preference number: 6 (lower is better) Translates to: VEDLLGEEQEVL*KQSPAGPHLSH Trigger: ATGGCTGAGGTGGGGACCAGCCGGGGACTGCTTCCAGAGCACTTCCTGTTCCTCGCCCAGAAGATCTTCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 72 bp | AGTTCTTCCTGCTTCCGATGGAAGGGCCCTGGCAGGTaGCGGAACTCCAAGGTGCTGATGTGCGGCAAGATG | + |
Preference number: 6 (lower is better) Translates to: SSSCFRWKGPGR*RNSKVLMCGKM Trigger: CATCTTGCCGCACATCAGCACCTTGGAGTTCCGCCACCTGCCAGGGCCCTTCCATCGGAAGCAGGAAGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120279.2 |
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CDS TCA 72 bp | ATGCTGTTTCCCTTCCCCTGCTCTCCAGCAGTGGCCTaGAGACGCTGGACTGTGGCAGAAAGTAGGGCACTG | + |
Preference number: 6 (lower is better) Translates to: MLFPFPCSPAVA*RRWTVAESRAL Trigger: CAGTGCCCTACTTTCTGCCACAGTCCAGCGTCTTCAGGCCACTGCTGGAGAGCAGGGGAAGGGAAACAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092074.12 ENSMUST00000120279.2 |
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CDS GCA 72 bp | AGCCTTCCGAGGGCTGTAGTAAACTTGAGTTCTTCCTaGTTCCGATGGAAGGGCCCTGGCAGGTGGCGGAAC | + |
Preference number: 6 (lower is better) Translates to: SLPRAVVNLSSS*FRWKGPGRWRN Trigger: GTTCCGCCACCTGCCAGGGCCCTTCCATCGGAAGCAGGAAGAACTCAAGTTTACTACAGCCCTCGGAAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092074.12 ENSMUST00000120279.2 |
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CDS GCA 72 bp | CTGACCATTGGAGGCTTGGCTGAGGTCCCTAGAAACTaGAGACCCAGCAGGAATCGAACCCCAGCCTGGAAC | + |
Preference number: 6 (lower is better) Translates to: LTIGGLAEVPRN*RPSRNRTPAWN Trigger: GTTCCAGGCTGGGGTTCGATTCCTGCTGGGTCTGCAGTTTCTAGGGACCTCAGCCAAGCCTCCAATGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS GCA 72 bp | TTGTCGTTGAAGATCTTCTGGGCGAGGAACAGGAAGTaGTCTGGAAGCAGTCCCCGGCTGGTCCCCACCTCA | + |
Preference number: 6 (lower is better) Translates to: LSLKIFWARNRK*SGSSPRLVPTS Trigger: TGAGGTGGGGACCAGCCGGGGACTGCTTCCAGAGCACTTCCTGTTCCTCGCCCAGAAGATCTTCAACGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 72 bp | CTTCATCCAGACGGCTTATCAGCGATGCCCGGGTCTTaGGTTCCAGTTCTCCACTGGCTGCCCCAATCTCCT | + |
Preference number: 6 (lower is better) Translates to: LHPDGLSAMPGS*VPVLHWLPQSP Trigger: AGGAGATTGGGGCAGCCAGTGGAGAACTGGAACCCAAGACCCGGGCATCGCTGATAAGCCGTCTGGATGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 72 bp | AAACTTGAGTTCTTCCTGCTTCCGATGGAAGGGCCCTaGCAGGTGGCGGAACTCCAAGGTGCTGATGTGCGG | + |
Preference number: 6 (lower is better) Translates to: KLEFFLLPMEGP*QVAELQGADVR Trigger: CCGCACATCAGCACCTTGGAGTTCCGCCACCTGCCAGGGCCCTTCCATCGGAAGCAGGAAGAACTCAAGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120279.2 |
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CDS CAA 72 bp | ACTTCATCCAGACGGCTTATCAGCGATGCCCGGGTCTaGGGTTCCAGTTCTCCACTGGCTGCCCCAATCTCC | + |
Preference number: 6 (lower is better) Translates to: TSSRRLISDARV*GSSSPLAAPIS Trigger: GGAGATTGGGGCAGCCAGTGGAGAACTGGAACCCAAGACCCGGGCATCGCTGATAAGCCGTCTGGATGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CAA 90 bp | TGCTCTGGAAGCAGTCCCCGGCTGGTCCCCACCTCAGCCATAAACTaGAGGTTTAGGGTTTCACACATCTTCTCCCAGGGCACTCGCTCA | + |
Preference number: 6 (lower is better) Translates to: CSGSSPRLVPTSAIN*RFRVSHIFSQGTRS Trigger: TGAGCGAGTGCCCTGGGAGAAGATGTGTGAAACCCTAAACCTCAAGTTTATGGCTGAGGTGGGGACCAGCCGGGGACTGCTTCCAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 72 bp | TCAGGGGGTCCCTCTGATAGATGCTCTCCAAGGTGCTaGTGTGCGGCAAGATGCTGTTTCCCTTCCCCTGCT | + |
Preference number: 6 (lower is better) Translates to: SGGPSDRCSPRC*CAARCCFPSPA Trigger: AGCAGGGGAAGGGAAACAGCATCTTGCCGCACATCAGCACCTTGGAGAGCATCTATCAGAGGGACCCCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 72 bp | CTGACCCAGGTGCCTTGGGGGAAACCTCCCACAGGCTaGGTTAGGCAGCTGTCCTCTACCATAGTCACATCT | + |
Preference number: 6 (lower is better) Translates to: LTQVPWGKPPTG*VRQLSSTIVTS Trigger: AGATGTGACTATGGTAGAGGACAGCTGCCTAACTCAGCCTGTGGGAGGTTTCCCCCAAGGCACCTGGGTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 72 bp | CATGGAAGCATCAGGGGCCATTCCAAGATCATAAGGTaGCACCATGGCAGGCATCTGGGGCTCTGGAGTAGG | + |
Preference number: 6 (lower is better) Translates to: HGSIRGHSKIIR*HHGRHLGLWSR Trigger: CCTACTCCAGAGCCCCAGATGCCTGCCATGGTGCCACCTTATGATCTTGGAATGGCCCCTGATGCTTCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 72 bp | AGGGCTGTAGTAAACTTGAGTTCTTCCTGCTTCCGATaGAAGGGCCCTGGCAGGTGGCGGAACTCCAAGGTG | + |
Preference number: 6 (lower is better) Translates to: RAVVNLSSSCFR*KGPGRWRNSKV Trigger: CACCTTGGAGTTCCGCCACCTGCCAGGGCCCTTCCATCGGAAGCAGGAAGAACTCAAGTTTACTACAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120279.2 |
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CDS CAA 72 bp | AGCAGTCCCCGGCTGGTCCCCACCTCAGCCATAAACTaGAGGTTTAGGGTTTCACACATCTTCTCCCAGGGC | + |
Preference number: 6 (lower is better) Translates to: SSPRLVPTSAIN*RFRVSHIFSQG Trigger: GCCCTGGGAGAAGATGTGTGAAACCCTAAACCTCAAGTTTATGGCTGAGGTGGGGACCAGCCGGGGACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CAA 90 bp | GTCCCCTGCAGCATGGTGGCCAGGTCCTCACTTGGACCAGGACCATaGACAGGAGGGTCTATCAAATTCTGCAGAGACACTTGTCCAGTC | + |
Preference number: 6 (lower is better) Translates to: VPCSMVARSSLGPGP*TGGSIKFCRDTCPV Trigger: GACTGGACAAGTGTCTCTGCAGAATTTGATAGACCCTCCTGTCAATGGTCCTGGTCCAAGTGAGGACCTGGCCACCATGCTGCAGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CAA 90 bp | GCAAGATCCCGGATCCGGTCCCCCAGTGAGCGAATGGACAGGTCTTaGGCAGAAAATGGCTGGATGTTCTCTATCTGTGAGGAGCCATCC | + |
Preference number: 6 (lower is better) Translates to: ARSRIRSPSERMDRS*AENGWMFSICEEPS Trigger: GGATGGCTCCTCACAGATAGAGAACATCCAGCCATTTTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGGATCCGGGATCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 72 bp | GCCGATCTGACCAGTAGCTCCGGAGACAGCGTTTGGTaGGGTCCAGGACACCATCAAACCACTGCCAAAATG | + |
Preference number: 6 (lower is better) Translates to: ADLTSSSGDSVW*GPGHHQTTAKM Trigger: CATTTTGGCAGTGGTTTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAGCTACTGGTCAGATCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 72 bp | CACAGTCCCCTGCAGCATGGTGGCCAGGTCCTCACTTaGACCAGGACCATTGACAGGAGGGTCTATCAAATT | + |
Preference number: 6 (lower is better) Translates to: HSPLQHGGQVLT*TRTIDRRVYQI Trigger: AATTTGATAGACCCTCCTGTCAATGGTCCTGGTCCAAGTGAGGACCTGGCCACCATGCTGCAGGGGACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 72 bp | GAGCAAGATCCCGGATCCGGTCCCCCAGTGAGCGAATaGACAGGTCTTTGGCAGAAAATGGCTGGATGTTCT | + |
Preference number: 6 (lower is better) Translates to: EQDPGSGPPVSE*TGLWQKMAGCS Trigger: AGAACATCCAGCCATTTTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGGATCCGGGATCTTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CAA 72 bp | TTCTCTGTCACCATGTCAGCTCTGACCATTGGAGGCTaGGCTGAGGTCCCTAGAAACTGCAGACCCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: FSVTMSALTIGG*AEVPRNCRPSR Trigger: CCTGCTGGGTCTGCAGTTTCTAGGGACCTCAGCCAAGCCTCCAATGGTCAGAGCTGACATGGTGACAGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS GCA 72 bp | TTCTGCAGAGACACTTGTCCAGTCTTAGCCCCTTGCTaGAGAGATTCTCGGAGAAGCCGGGTCTCCCTTACT | + |
Preference number: 6 (lower is better) Translates to: FCRDTCPVLAPC*RDSRRSRVSLT Trigger: AGTAAGGGAGACCCGGCTTCTCCGAGAATCTCTGCAGCAAGGGGCTAAGACTGGACAAGTGTCTCTGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS GCA 72 bp | TGGAACTTAGTCTGTGTCTTCAGAACCTGCGGGGGCTaGTTCTCCACCAGGAAAGAGCTGGTCACAAGGGTT | + |
Preference number: 6 (lower is better) Translates to: WNLVCVFRTCGG*FSTRKELVTRV Trigger: AACCCTTGTGACCAGCTCTTTCCTGGTGGAGAAGCAGCCCCCGCAGGTTCTGAAGACACAGACTAAGTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 72 bp | GGATCCGGTCCCCCAGTGAGCGAATGGACAGGTCTTTaGCAGAAAATGGCTGGATGTTCTCTATCTGTGAGG | + |
Preference number: 6 (lower is better) Translates to: GSGPPVSEWTGL*QKMAGCSLSVR Trigger: CCTCACAGATAGAGAACATCCAGCCATTTTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGGATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 72 bp | ATGGCAGGCATCTGGGGCTCTGGAGTAGGAAGGGGCTaGTCCCTTTCCACAGTCATCTTGATAGTAGTAGAG | + |
Preference number: 6 (lower is better) Translates to: MAGIWGSGVGRG*SLSTVILIVVE Trigger: CTCTACTACTATCAAGATGACTGTGGAAAGGGACCAGCCCCTTCCTACTCCAGAGCCCCAGATGCCTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CAA 72 bp | CAAATTCTGCAGAGACACTTGTCCAGTCTTAGCCCCTaGCTGCAGAGATTCTCGGAGAAGCCGGGTCTCCCT | + |
Preference number: 6 (lower is better) Translates to: QILQRHLSSLSP*LQRFSEKPGLP Trigger: AGGGAGACCCGGCTTCTCCGAGAATCTCTGCAGCAAGGGGCTAAGACTGGACAAGTGTCTCTGCAGAATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CAA 72 bp | GCTCTCCTCAAAGGGTGTGCCATTCCCTGCCAGCTGTaGCTGCCGCTTCCAAATCTGAATCCTTTTCAGCAC | + |
Preference number: 6 (lower is better) Translates to: ALLKGCAIPCQL*LPLPNLNPFQH Trigger: GTGCTGAAAAGGATTCAGATTTGGAAGCGGCAGCAACAGCTGGCAGGGAATGGCACACCCTTTGAGGAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CAA 72 bp | CGGATCCGGTCCCCCAGTGAGCGAATGGACAGGTCTTaGGCAGAAAATGGCTGGATGTTCTCTATCTGTGAG | + |
Preference number: 6 (lower is better) Translates to: RIRSPSERMDRS*AENGWMFSICE Trigger: CTCACAGATAGAGAACATCCAGCCATTTTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGGATCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 72 bp | GATTCTCGGAGAAGCCGGGTCTCCCTTACTCGATGCTaGAGCCTTCCGAGGGCTGTAGTAAACTTGAGTTCT | + |
Preference number: 6 (lower is better) Translates to: DSRRSRVSLTRC*SLPRAVVNLSS Trigger: AGAACTCAAGTTTACTACAGCCCTCGGAAGGCTTCAGCATCGAGTAAGGGAGACCCGGCTTCTCCGAGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 72 bp | GCATGGTGGCCAGGTCCTCACTTGGACCAGGACCATTaGCAGGAGGGTCTATCAAATTCTGCAGAGACACTT | + |
Preference number: 6 (lower is better) Translates to: AWWPGPHLDQDH*QEGLSNSAETL Trigger: AAGTGTCTCTGCAGAATTTGATAGACCCTCCTGTCAATGGTCCTGGTCCAAGTGAGGACCTGGCCACCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 72 bp | GCTCACAGCGCTTTATTTTCTTCAGGAGCAGGTTCTTaGACAGGGCGGAGCAGCAGTTGCTGGGAATGCTGT | + |
Preference number: 6 (lower is better) Translates to: AHSALFSSGAGS*TGRSSSCWECC Trigger: ACAGCATTCCCAGCAACTGCTGCTCCGCCCTGTTCAAGAACCTGCTCCTGAAGAAAATAAAGCGCTGTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 72 bp | TCCTTATTGAACTGTGACCAGGACACACAGCGGTGCTaGAAGGCCTCCACACTGAGGCTGTTGTCGTTGAAG | + |
Preference number: 6 (lower is better) Translates to: SLLNCDQDTQRC*KASTLRLLSLK Trigger: CTTCAACGACAACAGCCTCAGTGTGGAGGCCTTTCAGCACCGCTGTGTGTCCTGGTCACAGTTCAATAAGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS GCA 72 bp | AAATTCTGCAGAGACACTTGTCCAGTCTTAGCCCCTTaGTGCAGAGATTCTCGGAGAAGCCGGGTCTCCCTT | + |
Preference number: 6 (lower is better) Translates to: KFCRDTCPVLAP*CRDSRRSRVSL Trigger: AAGGGAGACCCGGCTTCTCCGAGAATCTCTGCAGCAAGGGGCTAAGACTGGACAAGTGTCTCTGCAGAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 72 bp | CCTGAAGACGCTGGACTGTGGCAGAAAGTAGGGCACTaGCCATGTTGTAACAGAAAGCATCTGAACCGACCA | + |
Preference number: 6 (lower is better) Translates to: PEDAGLWQKVGH*PCCNRKHLNRP Trigger: TGGTCGGTTCAGATGCTTTCTGTTACAACATGGCCAGTGCCCTACTTTCTGCCACAGTCCAGCGTCTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092074.12 ENSMUST00000120279.2 |
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CDS CCA 72 bp | AGGGCTGTAGTAAACTTGAGTTCTTCCTGCTTCCGATaGAAGGGCCCTGGCAGGTGGCGGAACTCTTCTATA | + |
Preference number: 6 (lower is better) Translates to: RAVVNLSSSCFR*KGPGRWRNSSI Trigger: TATAGAAGAGTTCCGCCACCTGCCAGGGCCCTTCCATCGGAAGCAGGAAGAACTCAAGTTTACTACAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CAA 72 bp | AGCATGGTGGCCAGGTCCTCACTTGGACCAGGACCATaGACAGGAGGGTCTATCAAATTCTGCAGAGACACT | + |
Preference number: 6 (lower is better) Translates to: SMVARSSLGPGP*TGGSIKFCRDT Trigger: AGTGTCTCTGCAGAATTTGATAGACCCTCCTGTCAATGGTCCTGGTCCAAGTGAGGACCTGGCCACCATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CAA 90 bp | AGGGTCTATCAAATTCTGCAGAGACACTTGTCCAGTCTTAGCCCCTaGCTGCAGAGATTCTCGGAGAAGCCGGGTCTCCCTTACTCGATG | + |
Preference number: 6 (lower is better) Translates to: RVYQILQRHLSSLSP*LQRFSEKPGLPYSM Trigger: CATCGAGTAAGGGAGACCCGGCTTCTCCGAGAATCTCTGCAGCAAGGGGCTAAGACTGGACAAGTGTCTCTGCAGAATTTGATAGACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 72 bp | AGTGGATGGACTGTGGAGGATACCCCATATCTGAGCTaGGTTGCATGGAAGCATCAGGGGCCATTCCAAGAT | + |
Preference number: 6 (lower is better) Translates to: SGWTVEDTPYLS*VAWKHQGPFQD Trigger: ATCTTGGAATGGCCCCTGATGCTTCCATGCAACTCAGCTCAGATATGGGGTATCCTCCACAGTCCATCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CCA 72 bp | TTGTCCCATAGGATGGTAGCTTTGGCGTTGTTGTCTTaGTTACCATGCACGATGACCACCAAGGGCAGAGAC | + |
Preference number: 6 (lower is better) Translates to: LSHRMVALALLS*LPCTMTTKGRD Trigger: GTCTCTGCCCTTGGTGGTCATCGTGCATGGTAACCAAGACAACAACGCCAAAGCTACCATCCTATGGGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CAA 72 bp | ACCACAAAGGGCACTCGGTCCATCTCAGAGAAGGCATaGTCCCATAGGATGGTAGCTTTGGCGTTGTTGTCT | + |
Preference number: 6 (lower is better) Translates to: TTKGTRSISEKA*SHRMVALALLS Trigger: AGACAACAACGCCAAAGCTACCATCCTATGGGACAATGCCTTCTCTGAGATGGACCGAGTGCCCTTTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CAA 72 bp | ATTGACAGGAGGGTCTATCAAATTCTGCAGAGACACTaGTCCAGTCTTAGCCCCTTGCTGCAGAGATTCTCG | + |
Preference number: 6 (lower is better) Translates to: IDRRVYQILQRH*SSLSPLLQRFS Trigger: CGAGAATCTCTGCAGCAAGGGGCTAAGACTGGACAAGTGTCTCTGCAGAATTTGATAGACCCTCCTGTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 72 bp | ATATTGCTTACTAATAAAGCCAATGATCAGCCGATCTaGCCAGTAGCTCCGGAGACAGCGTTTGGTGAGGTC | + |
Preference number: 6 (lower is better) Translates to: ILLTNKANDQPI*PVAPETAFGEV Trigger: GACCTCACCAAACGCTGTCTCCGGAGCTACTGGTCAGATCGGCTGATCATTGGCTTTATTAGTAAGCAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS TCA 72 bp | AAAGATGGCAGTACACTCATGGACTCTTCTAGGCTCTaGAATGAGTGGATGGACTGTGGAGGATACCCCATA | + |
Preference number: 6 (lower is better) Translates to: KDGSTLMDSSRL*NEWMDCGGYPI Trigger: TATGGGGTATCCTCCACAGTCCATCCACTCATTTCAGAGCCTAGAAGAGTCCATGAGTGTACTGCCATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS CAA 72 bp | TCGCTAAAGCGGAGGAGGAAGGTCCCATCTGGCTCATaGAGGAGAAGGCTAGTGACATATTGCTTACTAATA | + |
Preference number: 6 (lower is better) Translates to: SLKRRRKVPSGS*RRRLVTYCLLI Trigger: TATTAGTAAGCAATATGTCACTAGCCTTCTCCTCAATGAGCCAGATGGGACCTTCCTCCTCCGCTTTAGCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |
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CDS GCA 72 bp | CCATCTGGCTCATTGAGGAGAAGGCTAGTGACATATTaGTTACTAATAAAGCCAATGATCAGCCGATCTGAC | + |
Preference number: 6 (lower is better) Translates to: PSGSLRRRLVTY*LLIKPMISRSD Trigger: GTCAGATCGGCTGATCATTGGCTTTATTAGTAAGCAATATGTCACTAGCCTTCTCCTCAATGAGCCAGATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092074.12 |