Pregenerated sensors for STAT5B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020919Ensembl transcript IDs: ENSMUST00000004143.3, ENSMUST00000107358.9
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAATCCCCAACGGCCACCCGGCACCCAGCACTGTACAGTGCTGGCTaGCTGCTTGGCAGGCTGGCCCCGTGTGCAGGTCCCATTCCTACC | + |
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Preference number: 1 (lower is better) Translates to: QSPTATRHPALYSAG*LLGRLAPCAGPIPT Trigger: GGTAGGAATGGGACCTGCACACGGGGCCAGCCTGCCAAGCAGGCAGCCAGCACTGTACAGTGCTGGGTGCCGGGTGGCCGTTGGGGATTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CCA 90 bp | AACGGCCACCCGGCACCCAGCACTGTACAGTGCTGGCTGCCTGCTTaGCAGGCTGGCCCCGTGTGCAGGTCCCATTCCTACCACCTAATC | + |
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Preference number: 1 (lower is better) Translates to: NGHPAPSTVQCWLPA*QAGPVCRSHSYHLI Trigger: GATTAGGTGGTAGGAATGGGACCTGCACACGGGGCCAGCCTGCCAAGCAGGCAGCCAGCACTGTACAGTGCTGGGTGCCGGGTGGCCGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR TCA 90 bp | TGCCCTTGTTTGGGAGAGGAAGCCAAGGAGGGCTCTCAGCAAGCCTaGGTGGTAACCGCTCTCTGCTTGCCCCTCTCCCTGACGGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: CPCLGEEAKEGSQQA*VVTALCLPLSLTAH Trigger: GTGGGCCGTCAGGGAGAGGGGCAAGCAGAGAGCGGTTACCACTCAGGCTTGCTGAGAGCCCTCCTTGGCTTCCTCTCCCAAACAAGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CCA 90 bp | TATCAACACGCTTGGAGAAAAGCCTTGGATAGCGCAGGCGCGGCCTaGCCACAGCACAGACAAGAGTTGGGGAGGCTGGCGCAGACAGGC | + |
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Preference number: 1 (lower is better) Translates to: YQHAWRKALDSAGAA*PQHRQELGRLAQTG Trigger: GCCTGTCTGCGCCAGCCTCCCCAACTCTTGTCTGTGCTGTGGCCAGGCCGCGCCTGCGCTATCCAAGGCTTTTCTCCAAGCGTGTTGATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CCA 90 bp | TACAAAGCCCCACACCCCAAAGCTGAGGCTTTCCCGACTCACGAGTaGGTCTGTGAGCAGGCAAGAGGTGGGTGGAGACCTGCCCTCACC | + |
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Preference number: 1 (lower is better) Translates to: YKAPHPKAEAFPTHE*VCEQARGGWRPALT Trigger: GGTGAGGGCAGGTCTCCACCCACCTCTTGCCTGCTCACAGACCCACTCGTGAGTCGGGAAAGCCTCAGCTTTGGGGTGTGGGGCTTTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CCA 90 bp | CTTGCCCCTCTCCCTGACGGCCCACTGCAGCCCCTTCCTTCCTTCTaGAGACACTACAGAGGAGACTGTGGAACAAATCACCCTGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: LAPLPDGPLQPLPSF*RHYRGDCGTNHPEA Trigger: AGCCTCAGGGTGATTTGTTCCACAGTCTCCTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGAGAGGGGCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CCA 90 bp | GCTTTCCCGACTCACGAGTGGGTCTGTGAGCAGGCAAGAGGTGGGTaGAGACCTGCCCTCACCTCATTTTTGGGTGCAAGAGTTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: AFPTHEWVCEQARGG*RPALTSFLGARVGQ Trigger: CTGCCCAACTCTTGCACCCAAAAATGAGGTGAGGGCAGGTCTCCACCCACCTCTTGCCTGCTCACAGACCCACTCGTGAGTCGGGAAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CCA 90 bp | GTGAGCAGGCAAGAGGTGGGTGGAGACCTGCCCTCACCTCATTTTTaGGTGCAAGAGTTGGGCAGAGAGAGAGAGAGACCAGCATGCAGA | + |
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Preference number: 1 (lower is better) Translates to: VSRQEVGGDLPSPHF*VQELGRERERPACR Trigger: TCTGCATGCTGGTCTCTCTCTCTCTCTGCCCAACTCTTGCACCCAAAAATGAGGTGAGGGCAGGTCTCCACCCACCTCTTGCCTGCTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CCA 90 bp | AGGTGGGTGGAGACCTGCCCTCACCTCATTTTTGGGTGCAAGAGTTaGGCAGAGAGAGAGAGAGACCAGCATGCAGATAGGGGACACACT | + |
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Preference number: 1 (lower is better) Translates to: RWVETCPHLIFGCKS*AERERDQHADRGHT Trigger: AGTGTGTCCCCTATCTGCATGCTGGTCTCTCTCTCTCTCTGCCCAACTCTTGCACCCAAAAATGAGGTGAGGGCAGGTCTCCACCCACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CCA 90 bp | CTGAGCAAGCAGAGAGGGAAGGAGCCAGTGTTAAGATGGCGGAAGTaGCAGAAACGGGAAACAGCCACTCCCCATCCAAAAACCTGTGAC | + |
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Preference number: 1 (lower is better) Translates to: LSKQRGKEPVLRWRK*QKRETATPHPKTCD Trigger: GTCACAGGTTTTTGGATGGGGAGTGGCTGTTTCCCGTTTCTGCCACTTCCGCCATCTTAACACTGGCTCCTTCCCTCTCTGCTTGCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CCA 90 bp | CCTTTCCGTCCCTTATGCAAAGGGGACAGGGGACACGGGAGGTACTaGCTTTCATCATCAGACAGTCATCTACATCTCAGAAGACAGGCG | + |
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Preference number: 1 (lower is better) Translates to: PFRPLCKGDRGHGRY*LSSSDSHLHLRRQA Trigger: CGCCTGTCTTCTGAGATGTAGATGACTGTCTGATGATGAAAGCCAGTACCTCCCGTGTCCCCTGTCCCCTTTGCATAAGGGACGGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CCA 90 bp | TACTTGGATAGTCACGTGTCAAGGGTCAGCCACCCTGAAGACACATaGCCAGGTTCCAGGGTTCAGGGAACCAACTGCCTTTTTGCACAT | + |
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Preference number: 1 (lower is better) Translates to: YLDSHVSRVSHPEDT*PGSRVQGTNCLFAH Trigger: ATGTGCAAAAAGGCAGTTGGTTCCCTGAACCCTGGAACCTGGCCATGTGTCTTCAGGGTGGCTGACCCTTGACACGTGACTATCCAAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CCA 90 bp | GACAGAAGGAACACAGGGCATCACCTGAACCTGTACGCTCAGAGCTaGGTGGCCTGGCTTCCTCTCCACTATTTTGTTAAACATCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: DRRNTGHHLNLYAQS*VAWLPLHYFVKHLH Trigger: GTGGAGATGTTTAACAAAATAGTGGAGAGGAAGCCAGGCCACCCAGCTCTGAGCGTACAGGTTCAGGTGATGCCCTGTGTTCCTTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CCA 90 bp | AACACAGGGCATCACCTGAACCTGTACGCTCAGAGCTGGGTGGCCTaGCTTCCTCTCCACTATTTTGTTAAACATCTCCACTTGAGTACA | + |
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Preference number: 1 (lower is better) Translates to: NTGHHLNLYAQSWVA*LPLHYFVKHLHLST Trigger: TGTACTCAAGTGGAGATGTTTAACAAAATAGTGGAGAGGAAGCCAGGCCACCCAGCTCTGAGCGTACAGGTTCAGGTGATGCCCTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR TCA 90 bp | GGGTGGCCTGGCTTCCTCTCCACTATTTTGTTAAACATCTCCACTTaGGTACACACACTTGCACTTAAGCTGAGTGGCAGTTCTAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: GWPGFLSTILLNIST*VHTLALKLSGSSRN Trigger: ATTTCTAGAACTGCCACTCAGCTTAAGTGCAAGTGTGTGTACTCAAGTGGAGATGTTTAACAAAATAGTGGAGAGGAAGCCAGGCCACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGGCCTCACACCTCCTCCATCCGGCCAGCACCTGAGGCAGAGAGGCTACCCCAGCACTGTACAGTaGTGGCTGCCTGCTTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GRGLTPPPSGQHLRQRGYPSTVQ*WLPAWQ Trigger: CTGCCAAGCAGGCAGCCAGCACTGTACAGTGCTGGG...GTAGCCTCTCTGCCTCAGGTGCTGGCCGGATGGAGGAGGTGTGAGGCCCCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGGCTGGCGCAGACAGGCTACGCCCAGTGTCTGGAGCCAGGACTTGGGCAACGCTCAGAGCTGGGTaGCCTGGCTTCCTCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: GEAGADRLRPVSGARTWATLRAG*PGFLST Trigger: AGTGGAGAGGAAGCCAGGCCACCCAGCTCTGAGCGT...TGCCCAAGTCCTGGCTCCAGACACTGGGCGTAGCCTGTCTGCGCCAGCCTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CAA 90 bp | CAACGGCCACCCGGCACCCAGCACTGTACAGTGCTGGCTGCCTGCTaGGCAGGCTGGCCCCGTGTGCAGGTCCCATTCCTACCACCTAAT | + |
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Preference number: 2 (lower is better) Translates to: QRPPGTQHCTVLAAC*AGWPRVQVPFLPPN Trigger: ATTAGGTGGTAGGAATGGGACCTGCACACGGGGCCAGCCTGCCAAGCAGGCAGCCAGCACTGTACAGTGCTGGGTGCCGGGTGGCCGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGGCCTCACACCTCCTCCATCCGGCCAGCACCTGAGGCAGAGAGGCTACGGACTATGGACTACCTaGCAGAGGAACCGAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GRGLTPPPSGQHLRQRGYGLWTT*QRNRGS Trigger: GGAGCCTCGGTTCCTCTGCCAGGTAGTCCATAGTCC...GTAGCCTCTCTGCCTCAGGTGCTGGCCGGATGGAGGAGGTGTGAGGCCCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | CGCAGACAGGCTACGCCCAGTGTCTGGAGCCAGGACTTGGGCACAACGCACCGCCTGTACGCTCAGAGCTaGGTGGCCTGGCTTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: RRQATPSVWSQDLGTTHRLYAQS*VAWLPL Trigger: GAGAGGAAGCCAGGCCACCCAGCTCTGAGCGTACAG...GCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGACACTGGGCGTAGCCTGTCTGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGGCCTCACACCTCCTCCATCCGGCCAGCACCTGAGGCAGAGAGGCTACCCTTTCCGTCCCTTATaGAAAGGGGACAGGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: GRGLTPPPSGQHLRQRGYPFRPL*KGDRGH Trigger: GTGTCCCCTGTCCCCTTTGCATAAGGGACGGAAAGG...GTAGCCTCTCTGCCTCAGGTGCTGGCCGGATGGAGGAGGTGTGAGGCCCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGGCTGGCGCAGACAGGCTACGCCCAGTGTCTGGAGCCAGGACTTGGGCACACCCTGAAGACACATaGCCAGGTTCCAGGGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: GEAGADRLRPVSGARTWAHPEDT*PGSRVQ Trigger: CTGAACCCTGGAACCTGGCCATGTGTCTTCAGGGTG...TGCCCAAGTCCTGGCTCCAGACACTGGGCGTAGCCTGTCTGCGCCAGCCTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | CGCCCAGTGTCTGGAGCCAGGACTTGGGCACAACGCACCGCCCTGACAGAAGGAACGCTCAGAGCTGGGTaGCCTGGCTTCCTCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: RPVSGARTWAQRTALTEGTLRAG*PGFLST Trigger: AGTGGAGAGGAAGCCAGGCCACCCAGCTCTGAGCGT...TCCTTCTGTCAGGGCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGACACTGGGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGGCCTCACACCTCCTCCATCCGGCCAGCACCTGAGGCAGAGAGGCTACGGTTCTGCCCTTGTTTaGGAGAGGAAGCCAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GRGLTPPPSGQHLRQRGYGSALV*ERKPRR Trigger: CCTCCTTGGCTTCCTCTCCCAAACAAGGGCAGAACC...GTAGCCTCTCTGCCTCAGGTGCTGGCCGGATGGAGGAGGTGTGAGGCCCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR TCA 90 bp | CGCCCAGTGTCTGGAGCCAGGACTTGGGCACAACGCACCGCCCTGACAGAAGGAAAGGGTCAGCCACCCTaGAGACACATGGCCAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: RPVSGARTWAQRTALTEGKGQPP*RHMARF Trigger: GAACCTGGCCATGTGTCTTCAGGGTGGCTGACCCTT...TCCTTCTGTCAGGGCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGACACTGGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR GCA 90 bp | GGGGAGGCTGGCGCAGACAGGCTACGCCCAGTGTCTGGAGCCAGGACTTGGGCAACCTGTGACCACCCTTaGCCCATCACCCTTGATTCA | + |
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Preference number: 2 (lower is better) Translates to: GEAGADRLRPVSGARTWATCDHP*PITLDS Trigger: TGAATCAAGGGTGATGGGGCAAGGGTGGTCACAGGT...TGCCCAAGTCCTGGCTCCAGACACTGGGCGTAGCCTGTCTGCGCCAGCCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGGCTGGCGCAGACAGGCTACGCCCAGTGTCTGGAGCCAGGACTTGGGCACAGAGCTGGGTGGCCTaGCTTCCTCTCCACTATTTT | + |
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Preference number: 2 (lower is better) Translates to: GEAGADRLRPVSGARTWAQSWVA*LPLHYF Trigger: AAAATAGTGGAGAGGAAGCCAGGCCACCCAGCTCTG...TGCCCAAGTCCTGGCTCCAGACACTGGGCGTAGCCTGTCTGCGCCAGCCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGGCCTCACACCTCCTCCATCCGGCCAGCACCTGAGGCAGAGAGGCTACCAGAGCTGGGTGGCCTaGCTTCCTCTCCACTATTTT | + |
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Preference number: 2 (lower is better) Translates to: GRGLTPPPSGQHLRQRGYQSWVA*LPLHYF Trigger: AAAATAGTGGAGAGGAAGCCAGGCCACCCAGCTCTG...GTAGCCTCTCTGCCTCAGGTGCTGGCCGGATGGAGGAGGTGTGAGGCCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCCTGACGGCCCACTGCAGCCCCTTCCTTCCTTCTGGAGACACTACAGAGGCTACGCCCAGTGTCTaGAGCCAGGACTTGGGCACA | + |
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Preference number: 2 (lower is better) Translates to: LSLTAHCSPFLPSGDTTEATPSV*SQDLGT Trigger: TGTGCCCAAGTCCTGGCTCCAGACACTGGGCGTAGC...CTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR GCA 90 bp | CGCCCAGTGTCTGGAGCCAGGACTTGGGCACAACGCACCGCCCTGACAGAAGGAACCTGTGACCACCCTTaGCCCATCACCCTTGATTCA | + |
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Preference number: 2 (lower is better) Translates to: RPVSGARTWAQRTALTEGTCDHP*PITLDS Trigger: TGAATCAAGGGTGATGGGGCAAGGGTGGTCACAGGT...TCCTTCTGTCAGGGCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGACACTGGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR TCA 90 bp | GGGGACGAGTCCCTTAAGCCTGGACTCCCCTGGCAGTTCCAGCTTTCTTCTGAGAAGGGTCAGCCACCCTaGAGACACATGGCCAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: GDESLKPGLPWQFQLSSEKGQPP*RHMARF Trigger: GAACCTGGCCATGTGTCTTCAGGGTGGCTGACCCTT...CTCAGAAGAAAGCTGGAACTGCCAGGGGAGTCCAGGCTTAAGGGACTCGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR TCA 90 bp | TCCCTGACGGCCCACTGCAGCCCCTTCCTTCCTTCTGGAGACACTACAGAGGAGCCATCCAAAAACCTGTaGCCACCCTTGCCCCATCAC | + |
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Preference number: 2 (lower is better) Translates to: SLTAHCSPFLPSGDTTEEPSKNL*PPLPHH Trigger: GTGATGGGGCAAGGGTGGTCACAGGTTTTTGGATGG...CTCCTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTCCCTGACGGCCCACTGCAGCCCCTTCCTTCCTTCTGGAGACACTACAGAGACACAGGGCATCACCTaGACCTGTACGCTCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: LSLTAHCSPFLPSGDTTETQGIT*TCTLRA Trigger: AGCTCTGAGCGTACAGGTTCAGGTGATGCCCTGTGT...CTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR TCA 90 bp | TCCCTGACGGCCCACTGCAGCCCCTTCCTTCCTTCTGGAGACACTACAGAGGAGAGGAAACCCGCTGACTaGCTGCATTTCCCCAATCCC | + |
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Preference number: 2 (lower is better) Translates to: SLTAHCSPFLPSGDTTEERKPAD*LHFPNP Trigger: GGGATTGGGGAAATGCAGTCAGTCAGCGGGTTTCCT...CTCCTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR GCA 90 bp | ATCCCCAACGGCCACCCGGCACCCAGCACTGTACAGTGCTGGCTGCCTGCTTGGTCCCCAGAGAGAGGGTaGTTTTTCCTCTGTCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: IPNGHPAPSTVQCWLPAWSPERG*FFLCPF Trigger: AAAAGGACAGAGGAAAAAGCACCCTCTCTCTGGGGA...CCAAGCAGGCAGCCAGCACTGTACAGTGCTGGGTGCCGGGTGGCCGTTGGGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGACGAGTCCCTTAAGCCTGGACTCCCCTGGCAGTTCCAGCTTTCTTCTGAGAGCACAGACAAGAGTTaGGGAGGCTGGCGCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: GDESLKPGLPWQFQLSSESTDKS*GGWRRQ Trigger: CTGTCTGCGCCAGCCTCCCCAACTCTTGTCTGTGCT...CTCAGAAGAAAGCTGGAACTGCCAGGGGAGTCCAGGCTTAAGGGACTCGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGGCCTCACACCTCCTCCATCCGGCCAGCACCTGAGGCAGAGAGGCTACTCACTAGTGCCACTATaGACAGAGACACTAAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: GRGLTPPPSGQHLRQRGYSLVPL*TETLKS Trigger: TGACTTTAGTGTCTCTGTGCATAGTGGCACTAGTGA...GTAGCCTCTCTGCCTCAGGTGCTGGCCGGATGGAGGAGGTGTGAGGCCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR GCA 90 bp | GACAGAAGGAACACAGGGCATCACCTGAACCTGTACGCTCAGAGCTGGGTGGCCCCTTTCCGTCCCTTATaGAAAGGGGACAGGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: DRRNTGHHLNLYAQSWVAPFRPL*KGDRGH Trigger: GTGTCCCCTGTCCCCTTTGCATAAGGGACGGAAAGG...GGCCACCCAGCTCTGAGCGTACAGGTTCAGGTGATGCCCTGTGTTCCTTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR GCA 90 bp | TCCCTGACGGCCCACTGCAGCCCCTTCCTTCCTTCTGGAGACACTACAGAGGAGAACCCGCTGACTGACTaGATTTCCCCAATCCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: SLTAHCSPFLPSGDTTEENPLTD*ISPIPN Trigger: GTTGGGGATTGGGGAAATGCAGTCAGTCAGCGGGTT...CTCCTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGACGAGTCCCTTAAGCCTGGACTCCCCTGGCAGTTCCAGCTTTCTTCTGAGCACCCTGAAGACACATaGCCAGGTTCCAGGGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: GDESLKPGLPWQFQLSSEHPEDT*PGSRVQ Trigger: CTGAACCCTGGAACCTGGCCATGTGTCTTCAGGGTG...CTCAGAAGAAAGCTGGAACTGCCAGGGGAGTCCAGGCTTAAGGGACTCGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCAGGACTTGGGCACAACGCACCGCCCTGACAGAAGGAACACAGGGCATCGGACACGGGAGGTACTaGCTTTCATCATCAGACAGT | + |
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Preference number: 2 (lower is better) Translates to: GARTWAQRTALTEGTQGIGHGRY*LSSSDS Trigger: ACTGTCTGATGATGAAAGCCAGTACCTCCCGTGTCC...GATGCCCTGTGTTCCTTCTGTCAGGGCGGTGCGTTGTGCCCAAGTCCTGGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTTCTGGAGACACTACAGAGGAGACTGTGGAACAAATCACCCTGAGGCTTTGCTGGCTGCCTGCTTaGCAGGCTGGCCCCGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: LPSGDTTEETVEQITLRLCWLPA*QAGPVC Trigger: GCACACGGGGCCAGCCTGCCAAGCAGGCAGCCAGCA...AAGCCTCAGGGTGATTTGTTCCACAGTCTCCTCTGTAGTGTCTCCAGAAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR CAA 90 bp | TGTGAGCAGGCAAGAGGTGGGTGGAGACCTGCCCTCACCTCATTTTaGGGTGCAAGAGTTGGGCAGAGAGAGAGAGAGACCAGCATGCAG | + |
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Preference number: 2 (lower is better) Translates to: CEQARGGWRPALTSF*GARVGQRERETSMQ Trigger: CTGCATGCTGGTCTCTCTCTCTCTCTGCCCAACTCTTGCACCCAAAAATGAGGTGAGGGCAGGTCTCCACCCACCTCTTGCCTGCTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCCTGACGGCCCACTGCAGCCCCTTCCTTCCTTCTGGAGACACTACAGAGGGACACGGGAGGTACTaGCTTTCATCATCAGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: LSLTAHCSPFLPSGDTTEGHGRY*LSSSDS Trigger: ACTGTCTGATGATGAAAGCCAGTACCTCCCGTGTCC...CTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR GCA 90 bp | CGCCCAGTGTCTGGAGCCAGGACTTGGGCACAACGCACCGCCCTGACAGAAGGAGACAATGACAATGCTTaGTTGGACTATGGACTACCT | + |
|
Preference number: 2 (lower is better) Translates to: RPVSGARTWAQRTALTEGDNDNA*LDYGLP Trigger: AGGTAGTCCATAGTCCAAGCAAGCATTGTCATTGTC...TCCTTCTGTCAGGGCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGACACTGGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGGGACACGGGAGGTACTGGCTTTCATCATCAGACAGTCATCTACATCTCACGTGGCGGCTTAGACTaGACAGCAGGGGCGGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TGDTGGTGFHHQTVIYISRGGLD*TAGAGK Trigger: TTTCCCCGCCCCTGCTGTCCAGTCTAAGCCGCCACG...TGAGATGTAGATGACTGTCTGATGATGAAAGCCAGTACCTCCCGTGTCCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCTTCTGGAGACACTACAGAGGAGACTGTGGAACAAATCACCCTGAGGCTTTCTGGAGCCAGGACTTaGGCACAACGCACCGCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LPSGDTTEETVEQITLRLSGART*AQRTAL Trigger: CAGGGCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGA...AAGCCTCAGGGTGATTTGTTCCACAGTCTCCTCTGTAGTGTCTCCAGAAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCTTCTGGAGACACTACAGAGGAGACTGTGGAACAAATCACCCTGAGGCTTCACAACGCACCGCCCTaGCAGAAGGAACACAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LPSGDTTEETVEQITLRLHNAPP*QKEHRA Trigger: TGCCCTGTGTTCCTTCTGTCAGGGCGGTGCGTTGTG...AAGCCTCAGGGTGATTTGTTCCACAGTCTCCTCTGTAGTGTCTCCAGAAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCCCTGACGGCCCACTGCAGCCCCTTCCTTCCTTCTGGAGACACTACAGAGTCACTAGTGCCACTATaGACAGAGACACTAAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSLTAHCSPFLPSGDTTESLVPL*TETLKS Trigger: TGACTTTAGTGTCTCTGTGCATAGTGGCACTAGTGA...CTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCTTCTGGAGACACTACAGAGGAGACTGTGGAACAAATCACCCTGAGGCTTAGGAAACCCGCTGACTaGCTGCATTTCCCCAATCCC | + |
|
Preference number: 2 (lower is better) Translates to: LPSGDTTEETVEQITLRLRKPAD*LHFPNP Trigger: GGGATTGGGGAAATGCAGTCAGTCAGCGGGTTTCCT...AAGCCTCAGGGTGATTTGTTCCACAGTCTCCTCTGTAGTGTCTCCAGAAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGACCAGCATGCAGATAGGGGACACACTTTCCAGTTAAAAACCTCTCCCATGGGACTATGGACTACCTaGCAGAGGAACCGAGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RDQHADRGHTFQLKTSPMGLWTT*QRNRGS Trigger: GGAGCCTCGGTTCCTCTGCCAGGTAGTCCATAGTCC...CATGGGAGAGGTTTTTAACTGGAAAGTGTGTCCCCTATCTGCATGCTGGTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGACCAGCATGCAGATAGGGGACACACTTTCCAGTTAAAAACCTCTCCCATGAGCACTGTACAGTGCTaGCTGCCTGCTTGGCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RDQHADRGHTFQLKTSPMSTVQC*LPAWQA Trigger: AGCCTGCCAAGCAGGCAGCCAGCACTGTACAGTGCT...CATGGGAGAGGTTTTTAACTGGAAAGTGTGTCCCCTATCTGCATGCTGGTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTTATGCAAAGGGGACAGGGGACACGGGAGGTACTGGCTTTCATCATCAGACATCCCCAGAGAGAGGGTaGTTTTTCCTCTGTCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: PYAKGTGDTGGTGFHHQTSPERG*FFLCPF Trigger: AAAAGGACAGAGGAAAAAGCACCCTCTCTCTGGGGA...TGTCTGATGATGAAAGCCAGTACCTCCCGTGTCCCCTGTCCCCTTTGCATAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGACCAGCATGCAGATAGGGGACACACTTTCCAGTTAAAAACCTCTCCCATGCCCCTTCCTTCCTTCTaGAGACACTACAGAGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: RDQHADRGHTFQLKTSPMPLPSF*RHYRGD Trigger: GTCTCCTCTGTAGTGTCTCCAGAAGGAAGGAAGGGG...CATGGGAGAGGTTTTTAACTGGAAAGTGTGTCCCCTATCTGCATGCTGGTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGACCAGCATGCAGATAGGGGACACACTTTCCAGTTAAAAACCTCTCCCATGGAAGTCTCGCTTCTTTaGCACCCTTTTCTCCAACCT | + |
|
Preference number: 2 (lower is better) Translates to: RDQHADRGHTFQLKTSPMEVSLL*HPFLQP Trigger: AGGTTGGAGAAAAGGGTGCCAAAGAAGCGAGACTTC...CATGGGAGAGGTTTTTAACTGGAAAGTGTGTCCCCTATCTGCATGCTGGTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCTTCTGGAGACACTACAGAGGAGACTGTGGAACAAATCACCCTGAGGCTTTTAAACATCTCCACTTaGGTACACACACTTGCACTT | + |
|
Preference number: 2 (lower is better) Translates to: LPSGDTTEETVEQITLRLLNIST*VHTLAL Trigger: AAGTGCAAGTGTGTGTACTCAAGTGGAGATGTTTAA...AAGCCTCAGGGTGATTTGTTCCACAGTCTCCTCTGTAGTGTCTCCAGAAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAGACCAGCATGCAGATAGGGGACACACTTTCCAGTTAAAAACCTCTCCCATGTTAAACATCTCCACTTaGGTACACACACTTGCACTT | + |
|
Preference number: 2 (lower is better) Translates to: RDQHADRGHTFQLKTSPMLNIST*VHTLAL Trigger: AAGTGCAAGTGTGTGTACTCAAGTGGAGATGTTTAA...CATGGGAGAGGTTTTTAACTGGAAAGTGTGTCCCCTATCTGCATGCTGGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR GCA 72 bp | ACGGCCACCCGGCACCCAGCACTGTACAGTGCTGGCTaGCTGCTTGGCAGGCTGGCCCCGTGTGCAGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TATRHPALYSAG*LLGRLAPCAGP Trigger: GGGACCTGCACACGGGGCCAGCCTGCCAAGCAGGCAGCCAGCACTGTACAGTGCTGGGTGCCGGGTGGCCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CCA 72 bp | GCGCAGGCGCGGCCTGGCCACAGCACAGACAAGAGTTaGGGAGGCTGGCGCAGACAGGCTACGCCCAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: AQARPGHSTDKS*GGWRRQATPSV Trigger: GACACTGGGCGTAGCCTGTCTGCGCCAGCCTCCCCAACTCTTGTCTGTGCTGTGGCCAGGCCGCGCCTGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR GCA 72 bp | CCACCCGGCACCCAGCACTGTACAGTGCTGGCTGCCTaGTTGGCAGGCTGGCCCCGTGTGCAGGTCCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: PPGTQHCTVLAA*LAGWPRVQVPF Trigger: GAATGGGACCTGCACACGGGGCCAGCCTGCCAAGCAGGCAGCCAGCACTGTACAGTGCTGGGTGCCGGGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CCA 72 bp | CGGCCTGGCCACAGCACAGACAAGAGTTGGGGAGGCTaGCGCAGACAGGCTACGCCCAGTGTCTGGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RPGHSTDKSWGG*RRQATPSVWSQ Trigger: CTGGCTCCAGACACTGGGCGTAGCCTGTCTGCGCCAGCCTCCCCAACTCTTGTCTGTGCTGTGGCCAGGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR GCA 72 bp | CAGTGCTGGCTGCCTGCTTGGCAGGCTGGCCCCGTGTaGAGGTCCCATTCCTACCACCTAATCCTCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QCWLPAWQAGPV*RSHSYHLILRA Trigger: TGCCCTGAGGATTAGGTGGTAGGAATGGGACCTGCACACGGGGCCAGCCTGCCAAGCAGGCAGCCAGCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CCA 72 bp | GCTTGGAGAAAAGCCTTGGATAGCGCAGGCGCGGCCTaGCCACAGCACAGACAAGAGTTGGGGAGGCTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: AWRKALDSAGAA*PQHRQELGRLA Trigger: CGCCAGCCTCCCCAACTCTTGTCTGTGCTGTGGCCAGGCCGCGCCTGCGCTATCCAAGGCTTTTCTCCAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR TCA 72 bp | CGCACCGCCCTGACAGAAGGAACACAGGGCATCACCTaGACCTGTACGCTCAGAGCTGGGTGGCCTGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RTALTEGTQGIT*TCTLRAGWPGF Trigger: GAAGCCAGGCCACCCAGCTCTGAGCGTACAGGTTCAGGTGATGCCCTGTGTTCCTTCTGTCAGGGCGGTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR TCA 72 bp | GGAGGGGCCTCACACCTCCTCCATCCGGCCAGCACCTaGGGCAGAGAGGCTACCGCCAGGCATAGAAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: GGASHLLHPAST*GREATARHRKI Trigger: GATTTTTCTATGCCTGGCGGTAGCCTCTCTGCCTCAGGTGCTGGCCGGATGGAGGAGGTGTGAGGCCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR GCA 72 bp | ACCGCTCTCTGCTTGCCCCTCTCCCTGACGGCCCACTaGAGCCCCTTCCTTCCTTCTGGAGACACTACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TALCLPLSLTAH*SPFLPSGDTTE Trigger: CTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGAGAGGGGCAAGCAGAGAGCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CCA 72 bp | GCAGACAGGCTACGCCCAGTGTCTGGAGCCAGGACTTaGGCACAACGCACCGCCCTGACAGAAGGAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: ADRLRPVSGART*AQRTALTEGTQ Trigger: CTGTGTTCCTTCTGTCAGGGCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGACACTGGGCGTAGCCTGTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR TCA 72 bp | GTCCACACCCTCGTGAGGGTTACTGGGACAGTCGCATaGCAGGTGGGGACGAGTCCCTTAAGCCTGGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: VHTLVRVTGTVA*QVGTSPLSLDS Trigger: GGAGTCCAGGCTTAAGGGACTCGTCCCCACCTGTCATGCGACTGTCCCAGTAACCCTCACGAGGGTGTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CCA 72 bp | CAGCACTGTACAGTGCTGGCTGCCTGCTTGGCAGGCTaGCCCCGTGTGCAGGTCCCATTCCTACCACCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: QHCTVLAACLAG*PRVQVPFLPPN Trigger: ATTAGGTGGTAGGAATGGGACCTGCACACGGGGCCAGCCTGCCAAGCAGGCAGCCAGCACTGTACAGTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CCA 72 bp | CCACACCCCAAAGCTGAGGCTTTCCCGACTCACGAGTaGGTCTGTGAGCAGGCAAGAGGTGGGTGGAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: PHPKAEAFPTHE*VCEQARGGWRP Trigger: AGGTCTCCACCCACCTCTTGCCTGCTCACAGACCCACTCGTGAGTCGGGAAAGCCTCAGCTTTGGGGTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGGACGAGTCCCTTAAGCCTGGACTCCCCTGGCAGTTCCAGCTTTCTTCTGAGCAGCACAGACAAGAGTaGGGGAGGCTGGCGCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GDESLKPGLPWQFQLSSEQHRQE*GRLAQT Trigger: TGTCTGCGCCAGCCTCCCCAACTCTTGTCTGTGCTG...CTCAGAAGAAAGCTGGAACTGCCAGGGGAGTCCAGGCTTAAGGGACTCGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR TCA 72 bp | TGTCTGGAGCCAGGACTTGGGCACAACGCACCGCCCTaGCAGAAGGAACACAGGGCATCACCTGAACCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: CLEPGLGHNAPP*QKEHRASPEPV Trigger: TACAGGTTCAGGTGATGCCCTGTGTTCCTTCTGTCAGGGCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR GCA 72 bp | ATAAGGTTTTGGGGGCTCCTCTCCTGGGCACGGTTCTaGCCTTGTTTGGGAGAGGAAGCCAAGGAGGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: IRFWGLLSWARF*PCLGEEAKEGS Trigger: AGAGCCCTCCTTGGCTTCCTCTCCCAAACAAGGGCAGAACCGTGCCCAGGAGAGGAGCCCCCAAAACCTTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR CAA 90 bp | CGCCCAGTGTCTGGAGCCAGGACTTGGGCACAACGCACCGCCCTGACAGAAGGACTGTCCTTTTCTTACTaGGATAGTCACGTGTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RPVSGARTWAQRTALTEGLSFSY*DSHVSR Trigger: CCTTGACACGTGACTATCCAAGTAAGAAAAGGACAG...TCCTTCTGTCAGGGCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGACACTGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CCA 72 bp | CTGAGCAAGCAGAGAGGGAAGGAGCCAGTGTTAAGATaGCGGAAGTGGCAGAAACGGGAAACAGCCACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LSKQRGKEPVLR*RKWQKRETATP Trigger: GGGAGTGGCTGTTTCCCGTTTCTGCCACTTCCGCCATCTTAACACTGGCTCCTTCCCTCTCTGCTTGCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CCA 72 bp | CTCCCTGACGGCCCACTGCAGCCCCTTCCTTCCTTCTaGAGACACTACAGAGGAGACTGTGGAACAAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: LPDGPLQPLPSF*RHYRGDCGTNH Trigger: GTGATTTGTTCCACAGTCTCCTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CCA 72 bp | ACTCACGAGTGGGTCTGTGAGCAGGCAAGAGGTGGGTaGAGACCTGCCCTCACCTCATTTTTGGGTGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: THEWVCEQARGG*RPALTSFLGAR Trigger: TCTTGCACCCAAAAATGAGGTGAGGGCAGGTCTCCACCCACCTCTTGCCTGCTCACAGACCCACTCGTGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCCCTGACGGCCCACTGCAGCCCCTTCCTTCCTTCTGGAGACACTACAGAGAATGACAATGCTTGCTaGGACTATGGACTACCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSLTAHCSPFLPSGDTTENDNAC*DYGLPG Trigger: GCCAGGTAGTCCATAGTCCAAGCAAGCATTGTCATT...CTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGACCAGCATGCAGATAGGGGACACACTTTCCAGTTAAAAACCTCTCCCATGGTCTGGAGCCAGGACTaGGGCACAACGCACCGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RDQHADRGHTFQLKTSPMVWSQD*GTTHRP Trigger: AGGGCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGAC...CATGGGAGAGGTTTTTAACTGGAAAGTGTGTCCCCTATCTGCATGCTGGTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CCA 72 bp | GGGCACTATGTGACACTGAAGGGAGATGAAGTGATCTaGGTACAGAGGACCCAGGACCTGATACAGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GHYVTLKGDEVI*VQRTQDLIQEG Trigger: CCCCTCCTGTATCAGGTCCTGGGTCCTCTGTACCCAGATCACTTCATCTCCCTTCAGTGTCACATAGTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CCA 72 bp | CAGAGAGGGAAGGAGCCAGTGTTAAGATGGCGGAAGTaGCAGAAACGGGAAACAGCCACTCCCCATCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QRGKEPVLRWRK*QKRETATPHPK Trigger: TTTTGGATGGGGAGTGGCTGTTTCCCGTTTCTGCCACTTCCGCCATCTTAACACTGGCTCCTTCCCTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGGACGAGTCCCTTAAGCCTGGACTCCCCTGGCAGTTCCAGCTTTCTTCTGAGCTGTCCTTTTCTTACTaGGATAGTCACGTGTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GDESLKPGLPWQFQLSSELSFSY*DSHVSR Trigger: CCTTGACACGTGACTATCCAAGTAAGAAAAGGACAG...CTCAGAAGAAAGCTGGAACTGCCAGGGGAGTCCAGGCTTAAGGGACTCGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGACCAGCATGCAGATAGGGGACACACTTTCCAGTTAAAAACCTCTCCCATGCAGCACAGACAAGAGTaGGGGAGGCTGGCGCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: RDQHADRGHTFQLKTSPMQHRQE*GRLAQT Trigger: TGTCTGCGCCAGCCTCCCCAACTCTTGTCTGTGCTG...CATGGGAGAGGTTTTTAACTGGAAAGTGTGTCCCCTATCTGCATGCTGGTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTTATGCAAAGGGGACAGGGGACACGGGAGGTACTGGCTTTCATCATCAGACAAATGACAATGCTTGCTaGGACTATGGACTACCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PYAKGTGDTGGTGFHHQTNDNAC*DYGLPG Trigger: GCCAGGTAGTCCATAGTCCAAGCAAGCATTGTCATT...TGTCTGATGATGAAAGCCAGTACCTCCCGTGTCCCCTGTCCCCTTTGCATAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CCA 72 bp | CCCTTATGCAAAGGGGACAGGGGACACGGGAGGTACTaGCTTTCATCATCAGACAGTCATCTACATCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PLCKGDRGHGRY*LSSSDSHLHLR Trigger: TCTGAGATGTAGATGACTGTCTGATGATGAAAGCCAGTACCTCCCGTGTCCCCTGTCCCCTTTGCATAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CCA 72 bp | CATCACCTGAACCTGTACGCTCAGAGCTGGGTGGCCTaGCTTCCTCTCCACTATTTTGTTAAACATCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: HHLNLYAQSWVA*LPLHYFVKHLH Trigger: GTGGAGATGTTTAACAAAATAGTGGAGAGGAAGCCAGGCCACCCAGCTCTGAGCGTACAGGTTCAGGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR TCA 72 bp | ACAGTCATCTACATCTCAGAAGACAGGCGGAGACAATaGCAATGCTTGCTTGGACTATGGACTACCTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TVIYISEDRRRQ*QCLLGLWTTWQ Trigger: CTGCCAGGTAGTCCATAGTCCAAGCAAGCATTGTCATTGTCTCCGCCTGTCTTCTGAGATGTAGATGACTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR TCA 72 bp | GGCTTCCTCTCCACTATTTTGTTAAACATCTCCACTTaGGTACACACACTTGCACTTAAGCTGAGTGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GFLSTILLNIST*VHTLALKLSGS Trigger: ACTGCCACTCAGCTTAAGTGCAAGTGTGTGTACTCAAGTGGAGATGTTTAACAAAATAGTGGAGAGGAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CAA 72 bp | AGCGCAGGCGCGGCCTGGCCACAGCACAGACAAGAGTaGGGGAGGCTGGCGCAGACAGGCTACGCCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAGAAWPQHRQE*GRLAQTGYAQC Trigger: ACACTGGGCGTAGCCTGTCTGCGCCAGCCTCCCCAACTCTTGTCTGTGCTGTGGCCAGGCCGCGCCTGCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGGCCTCACACCTCCTCCATCCGGCCAGCACCTGAGGCAGAGAGGCTACACCTCGATGGGGAAATaGTGGCCGTACAAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGLTPPPSGQHLRQRGYTSMGK*WPYKAC Trigger: GCAGGCCTTGTACGGCCAGCATTTCCCCATCGAGGT...GTAGCCTCTCTGCCTCAGGTGCTGGCCGGATGGAGGAGGTGTGAGGCCCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | CGCAGACAGGCTACGCCCAGTGTCTGGAGCCAGGACTTGGGCACAACGCACCGCCGGGGACCACCTGCTTaGTCTGTGGCTTCACGTATC | + |
|
Preference number: 4 (lower is better) Translates to: RRQATPSVWSQDLGTTHRRGPPA*SVASRI Trigger: GATACGTGAAGCCACAGATCAAGCAGGTGGTCCCCG...GCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGACACTGGGCGTAGCCTGTCTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGCCTCACACCTCCTCCATCCGGCCAGCACCTGAGGCAGAGAGGCTACTCGATGGGGAAATGCTaGCCGTACAAGGCCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GRGLTPPPSGQHLRQRGYSMGKC*PYKACI Trigger: GATGCAGGCCTTGTACGGCCAGCATTTCCCCATCGA...GTAGCCTCTCTGCCTCAGGTGCTGGCCGGATGGAGGAGGTGTGAGGCCCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | GGGGAGGCTGGCGCAGACAGGCTACGCCCAGTGTCTGGAGCCAGGACTTGGGCAACCGACGCTGAACTGTaGGTCAAACAGGATCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GEAGADRLRPVSGARTWATDAEL*VKQDRE Trigger: TTCACGATCCTGTTTGACTCACAGTTCAGCGTCGGT...TGCCCAAGTCCTGGCTCCAGACACTGGGCGTAGCCTGTCTGCGCCAGCCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | CGCCCAGTGTCTGGAGCCAGGACTTGGGCACAACGCACCGCCCTGACAGAAGGAGGCGGTCAGACCTCTTaGTTCGTTTCAGGGACATGT | + |
|
Preference number: 4 (lower is better) Translates to: RPVSGARTWAQRTALTEGGGQTS*FVSGTC Trigger: ACATGTCCCTGAAACGAATCAAGAGGTCTGACCGCC...TCCTTCTGTCAGGGCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGACACTGGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | GACAGAAGGAACACAGGGCATCACCTGAACCTGTACGCTCAGAGCTGGGTGGCCGCAAATTCTCCCGGTTaGACTGGGACCAGGACACGG | + |
|
Preference number: 4 (lower is better) Translates to: DRRNTGHHLNLYAQSWVAANSPG*TGTRTR Trigger: CCGTGTCCTGGTCCCAGTTCAACCGGGAGAATTTGC...GGCCACCCAGCTCTGAGCGTACAGGTTCAGGTGATGCCCTGTGTTCCTTCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGCCTCACACCTCCTCCATCCGGCCAGCACCTGAGGCAGAGAGGCTACAGTGTAATTCCGTCCTaGCAAATTCTCCCGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRGLTPPPSGQHLRQRGYSVIPS*QILPVE Trigger: TTCAACCGGGAGAATTTGCCAGGACGGAATTACACT...GTAGCCTCTCTGCCTCAGGTGCTGGCCGGATGGAGGAGGTGTGAGGCCCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | GGGGACGAGTCCCTTAAGCCTGGACTCCCCTGGCAGTTCCAGCTTTCTTCTGAGCTGAGGGCACACGACTaGGGAAGGAGCCTGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GDESLKPGLPWQFQLSSELRAHD*GRSLIH Trigger: ATGGATCAGGCTCCTTCCCCAGTCGTGTGCCCTCAG...CTCAGAAGAAAGCTGGAACTGCCAGGGGAGTCCAGGCTTAAGGGACTCGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCTGACGGCCCACTGCAGCCCCTTCCTTCCTTCTGGAGACACTACAGAGTCCACTGACTGTCCATaGGCCGGCCTAAGAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLTAHCSPFLPSGDTTESTDCP*AGLRAL Trigger: AAGAGCTCTTAGGCCGGCCCATGGACAGTCAGTGGA...CTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | GGGGAGGCTGGCGCAGACAGGCTACGCCCAGTGTCTGGAGCCAGGACTTGGGCACAAAACATTCTCTCCTaGGAGTCAAACTTCCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEAGADRLRPVSGARTWAQNILS*ESNFQA Trigger: TGCTTGGAAGTTTGACTCTCAGGAGAGAATGTTTTG...TGCCCAAGTCCTGGCTCCAGACACTGGGCGTAGCCTGTCTGCGCCAGCCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | CGCCCAGTGTCTGGAGCCAGGACTTGGGCACAACGCACCGCCCTGACAGAAGGAATTGAGTCCCAGGCTTaGCTTTCGATCCACTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPVSGARTWAQRTALTEGIESQA*LSIHCD Trigger: ATCACAGTGGATCGAAAGCCAAGCCTGGGACTCAAT...TCCTTCTGTCAGGGCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGACACTGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | CGCAGACAGGCTACGCCCAGTGTCTGGAGCCAGGACTTGGGCACAACGCACCGCAGTGTAATTCCGTCCTaGCAAATTCTCCCGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRQATPSVWSQDLGTTHRSVIPS*QILPVE Trigger: TTCAACCGGGAGAATTTGCCAGGACGGAATTACACT...GCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGACACTGGGCGTAGCCTGTCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | ATGCACTCACACTCACGCGCACTCCCTTCACTAGTGCCACTATGCACAGAGACATCGCCCTGGAGCTGCTaGGCCTGTATCCACATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MHSHSRALPSLVPLCTETSPWSC*ACIHIA Trigger: GGCTATGTGGATACAGGCTCAGCAGCTCCAGGGCGA...TGTCTCTGTGCATAGTGGCACTAGTGAAGGGAGTGCGCGTGAGTGTGAGTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGGGACAGGGGACACGGGAGGTACTGGCTTTCATCATCAGACAGTCATCTACTGCTCATGCGCTCCTaGGGGTTCAGCTGTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGDRGHGRYWLSSSDSHLLLMRS*GFSCPS Trigger: GCTGGGACAGCTGAACCCCCAGGAGCGCATGAGCAG...TAGATGACTGTCTGATGATGAAAGCCAGTACCTCCCGTGTCCCCTGTCCCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CAA 72 bp | GCAAGAGGTGGGTGGAGACCTGCCCTCACCTCATTTTaGGGTGCAAGAGTTGGGCAGAGAGAGAGAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: ARGGWRPALTSF*GARVGQRERET Trigger: GGTCTCTCTCTCTCTCTGCCCAACTCTTGCACCCAAAAATGAGGTGAGGGCAGGTCTCCACCCACCTCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | GACAGAAGGAACACAGGGCATCACCTGAACCTGTACGCTCAGAGCTGGGTGGCCACCGACGCTGAACTGTaGGTCAAACAGGATCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DRRNTGHHLNLYAQSWVATDAEL*VKQDRE Trigger: TTCACGATCCTGTTTGACTCACAGTTCAGCGTCGGT...GGCCACCCAGCTCTGAGCGTACAGGTTCAGGTGATGCCCTGTGTTCCTTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | ATGCACTCACACTCACGCGCACTCCCTTCACTAGTGCCACTATGCACAGAGACACGGGGACCACCTGCTTaGTCTGTGGCTTCACGTATC | + |
|
Preference number: 4 (lower is better) Translates to: MHSHSRALPSLVPLCTETRGPPA*SVASRI Trigger: GATACGTGAAGCCACAGATCAAGCAGGTGGTCCCCG...TGTCTCTGTGCATAGTGGCACTAGTGAAGGGAGTGCGCGTGAGTGTGAGTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR GCA 90 bp | AAGCAGAGAGGGAAGGAGCCAGTGTTAAGATGGCGGAAGTGGCAGAAACGGGAAACCTCGATGGGGAAATaGTGGCCGTACAAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQRGKEPVLRWRKWQKRETSMGK*WPYKAC Trigger: GCAGGCCTTGTACGGCCAGCATTTCCCCATCGAGGT...TTCCCGTTTCTGCCACTTCCGCCATCTTAACACTGGCTCCTTCCCTCTCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | CTTCCTTCTGGAGACACTACAGAGGAGACTGTGGAACAAATCACCCTGAGGCTTTCGCCCTGGAGCTGCTaGGCCTGTATCCACATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSGDTTEETVEQITLRLSPWSC*ACIHIA Trigger: GGCTATGTGGATACAGGCTCAGCAGCTCCAGGGCGA...AAGCCTCAGGGTGATTTGTTCCACAGTCTCCTCTGTAGTGTCTCCAGAAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | TCCCTGACGGCCCACTGCAGCCCCTTCCTTCCTTCTGGAGACACTACAGAGGAGCAGGAAACACATATATaGGGTAATTCAGGTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLTAHCSPFLPSGDTTEEQETHI*GNSGPP Trigger: TGGGGGACCTGAATTACCTCATATATGTGTTTCCTG...CTCCTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGGGACAGGGGACACGGGAGGTACTGGCTTTCATCATCAGACAGTCATCTAAGGCCCTCCAGGAGCTaGGTGGCCTTAATGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGDRGHGRYWLSSSDSHLRPSRS*VALMFS Trigger: GGAGAACATTAAGGCCACCCAGCTCCTGGAGGGCCT...TAGATGACTGTCTGATGATGAAAGCCAGTACCTCCCGTGTCCCCTGTCCCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | AGAGACCAGCATGCAGATAGGGGACACACTTTCCAGTTAAAAACCTCTCCCATGCTGCTCATGCGCTCCTaGGGGTTCAGCTGTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDQHADRGHTFQLKTSPMLLMRS*GFSCPS Trigger: GCTGGGACAGCTGAACCCCCAGGAGCGCATGAGCAG...CATGGGAGAGGTTTTTAACTGGAAAGTGTGTCCCCTATCTGCATGCTGGTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | AAGCAGAGAGGGAAGGAGCCAGTGTTAAGATGGCGGAAGTGGCAGAAACGGGAAGGAGCGACAAGGTCTTaGCTTGAAAGACCAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KQRGKEPVLRWRKWQKREGATRS*LERPAR Trigger: ACGAGCTGGTCTTTCAAGTCAAGACCTTGTCGCTCC...TTCCCGTTTCTGCCACTTCCGCCATCTTAACACTGGCTCCTTCCCTCTCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | ATGCACTCACACTCACGCGCACTCCCTTCACTAGTGCCACTATGCACAGAGACAGACATGTTTCTGAAGTaGGCGCTGAGTGTGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MHSHSRALPSLVPLCTETDMFLK*ALSVPV Trigger: CACTGGCACACTCAGCGCCCACTTCAGAAACATGTC...TGTCTCTGTGCATAGTGGCACTAGTGAAGGGAGTGCGCGTGAGTGTGAGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| 3UTR CAA 72 bp | TCTCAGAAGACAGGCGGAGACAATGACAATGCTTGCTaGGACTATGGACTACCTGGCAGAGGAACCGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQKTGGDNDNAC*DYGLPGRGTEA Trigger: AGCCTCGGTTCCTCTGCCAGGTAGTCCATAGTCCAAGCAAGCATTGTCATTGTCTCCGCCTGTCTTCTGAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | AAGCAGAGAGGGAAGGAGCCAGTGTTAAGATGGCGGAAGTGGCAGAAACGGGAACCTCAAACGTTTGGTTaGTCTGAAGGTGCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQRGKEPVLRWRKWQKREPQTFG*SEGASG Trigger: CCCAGAAGCACCTTCAGATCAACCAAACGTTTGAGG...TTCCCGTTTCTGCCACTTCCGCCATCTTAACACTGGCTCCTTCCCTCTCTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | GGGGACGAGTCCCTTAAGCCTGGACTCCCCTGGCAGTTCCAGCTTTCTTCTGAGCAAAACATTCTCTCCTaGGAGTCAAACTTCCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GDESLKPGLPWQFQLSSEQNILS*ESNFQA Trigger: TGCTTGGAAGTTTGACTCTCAGGAGAGAATGTTTTG...CTCAGAAGAAAGCTGGAACTGCCAGGGGAGTCCAGGCTTAAGGGACTCGTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR GCA 90 bp | CCTTATGCAAAGGGGACAGGGGACACGGGAGGTACTGGCTTTCATCATCAGACATCGTTGTACAGAATGTaGCGGATACAGCGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PYAKGTGDTGGTGFHHQTSLYRM*RIQRTS Trigger: GCTGGTTCGCTGTATCCGGCACATTCTGTACAACGA...TGTCTGATGATGAAAGCCAGTACCTCCCGTGTCCCCTGTCCCCTTTGCATAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR GCA 90 bp | AAGCAGAGAGGGAAGGAGCCAGTGTTAAGATGGCGGAAGTGGCAGAAACGGGAACATTGTTGTCCTGGCTaGCGTGAACAATCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KQRGKEPVLRWRKWQKREHCCPG*REQSPP Trigger: TGGTGGTGATTGTTCACGGCAGCCAGGACAACAATG...TTCCCGTTTCTGCCACTTCCGCCATCTTAACACTGGCTCCTTCCCTCTCTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGGGACAGGGGACACGGGAGGTACTGGCTTTCATCATCAGACAGTCATCTAGACATGTTTCTGAAGTaGGCGCTGAGTGTGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGDRGHGRYWLSSSDSHLDMFLK*ALSVPV Trigger: CACTGGCACACTCAGCGCCCACTTCAGAAACATGTC...TAGATGACTGTCTGATGATGAAAGCCAGTACCTCCCGTGTCCCCTGTCCCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | AAGCAGAGAGGGAAGGAGCCAGTGTTAAGATGGCGGAAGTGGCAGAAACGGGAAATTGAGTCCCAGGCTTaGCTTTCGATCCACTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQRGKEPVLRWRKWQKREIESQA*LSIHCD Trigger: ATCACAGTGGATCGAAAGCCAAGCCTGGGACTCAAT...TTCCCGTTTCTGCCACTTCCGCCATCTTAACACTGGCTCCTTCCCTCTCTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGCCTGGCTTCCTCTCCACTATTTTGTTAAACATCTCCACTTGAGTACACTGAGGGCACACGACTaGGGAAGGAGCCTGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WVAWLPLHYFVKHLHLSTLRAHD*GRSLIH Trigger: ATGGATCAGGCTCCTTCCCCAGTCGTGTGCCCTCAG...TGTACTCAAGTGGAGATGTTTAACAAAATAGTGGAGAGGAAGCCAGGCCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGGGACACGGGAGGTACTGGCTTTCATCATCAGACAGTCATCTACATCTCATCGTTGTACAGAATGTaGCGGATACAGCGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGDTGGTGFHHQTVIYISSLYRM*RIQRTS Trigger: GCTGGTTCGCTGTATCCGGCACATTCTGTACAACGA...TGAGATGTAGATGACTGTCTGATGATGAAAGCCAGTACCTCCCGTGTCCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGCCTGGCTTCCTCTCCACTATTTTGTTAAACATCTCCACTTGAGTACATCGATGGGGAAATGCTaGCCGTACAAGGCCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: WVAWLPLHYFVKHLHLSTSMGKC*PYKACI Trigger: GATGCAGGCCTTGTACGGCCAGCATTTCCCCATCGA...TGTACTCAAGTGGAGATGTTTAACAAAATAGTGGAGAGGAAGCCAGGCCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGCCTGGCTTCCTCTCCACTATTTTGTTAAACATCTCCACTTGAGTACAGGAGCGACAAGGTCTTaGCTTGAAAGACCAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WVAWLPLHYFVKHLHLSTGATRS*LERPAR Trigger: ACGAGCTGGTCTTTCAAGTCAAGACCTTGTCGCTCC...TGTACTCAAGTGGAGATGTTTAACAAAATAGTGGAGAGGAAGCCAGGCCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGCCTGGCTTCCTCTCCACTATTTTGTTAAACATCTCCACTTGAGTACACCTCAAACGTTTGGTTaGTCTGAAGGTGCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVAWLPLHYFVKHLHLSTPQTFG*SEGASG Trigger: CCCAGAAGCACCTTCAGATCAACCAAACGTTTGAGG...TGTACTCAAGTGGAGATGTTTAACAAAATAGTGGAGAGGAAGCCAGGCCACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | GTTTCCAAAGAGAAGCGATTCATGGAATTAAAACATCCACAGGAAGTTCCTCCAGCAAATTCTCCCGGTTaGACTGGGACCAGGACACGG | + |
|
Preference number: 4 (lower is better) Translates to: VSKEKRFMELKHPQEVPPANSPG*TGTRTR Trigger: CCGTGTCCTGGTCCCAGTTCAACCGGGAGAATTTGC...TGGAGGAACTTCCTGTGGATGTTTTAATTCCATGAATCGCTTCTCTTTGGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR TCA 90 bp | AGAGACCAGCATGCAGATAGGGGACACACTTTCCAGTTAAAAACCTCTCCCATGCAGGAAACACATATATaGGGTAATTCAGGTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RDQHADRGHTFQLKTSPMQETHI*GNSGPP Trigger: TGGGGGACCTGAATTACCTCATATATGTGTTTCCTG...CATGGGAGAGGTTTTTAACTGGAAAGTGTGTCCCCTATCTGCATGCTGGTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CAA 90 bp | ATCCCCAACGGCCACCCGGCACCCAGCACTGTACAGTGCTGGCTGCCTGCTTGGGTCCCGTCTGGCTTGTaGATGAGCAGGTCGTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IPNGHPAPSTVQCWLPAWVPSGL*MSRSWA Trigger: GGCCCACGACCTGCTCATCAACAAGCCAGACGGGAC...CCAAGCAGGCAGCCAGCACTGTACAGTGCTGGGTGCCGGGTGGCCGTTGGGGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGGCCTCACACCTCCTCCATCCGGCCAGCACCTGAGGCAGAGAGGCTACAAGGTCCCGTCTGGCTaGTTGATGAGCAGGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGLTPPPSGQHLRQRGYKVPSG*LMSRSW Trigger: CCACGACCTGCTCATCAACAAGCCAGACGGGACCTT...GTAGCCTCTCTGCCTCAGGTGCTGGCCGGATGGAGGAGGTGTGAGGCCCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CAA 90 bp | GGGGAGGCTGGCGCAGACAGGCTACGCCCAGTGTCTGGAGCCAGGACTTGGGCATCGGGGACCACCTGCTaGATCTGTGGCTTCACGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GEAGADRLRPVSGARTWASGTTC*ICGFTY Trigger: ATACGTGAAGCCACAGATCAAGCAGGTGGTCCCCGA...TGCCCAAGTCCTGGCTCCAGACACTGGGCGTAGCCTGTCTGCGCCAGCCTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS CCA 90 bp | GAGCCTGAGGGCACACGACTGGGGAAGGAGCCTGATCCATGTAGGTaGCGCCACTCCCAGCATCTGTGGATGCATTTGCAAACTCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EPEGTRLGKEPDPCR*RHSQHLWMHLQTRG Trigger: TCCCCGAGTTTGCAAATGCATCCACAGATGCTGGGAGTGGCGCCACCTACATGGATCAGGCTCCTTCCCCAGTCGTGTGCCCTCAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CAA 90 bp | GGGGACGAGTCCCTTAAGCCTGGACTCCCCTGGCAGTTCCAGCTTTCTTCTGAGGGCTCTGCAAAGGCGTaGTCCCAGAGGACAGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GDESLKPGLPWQFQLSSEGSAKA*SQRTVA Trigger: AGCCACTGTCCTCTGGGACAACGCCTTTGCAGAGCC...CTCAGAAGAAAGCTGGAACTGCCAGGGGAGTCCAGGCTTAAGGGACTCGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTGACGGCCCACTGCAGCCCCTTCCTTCCTTCTGGAGACACTACAGAGGAGCGGCGGTCAGACCTCTaGATTCGTTTCAGGGACATG | + |
|
Preference number: 5 (lower is better) Translates to: SLTAHCSPFLPSGDTTEERRSDL*IRFRDM Trigger: CATGTCCCTGAAACGAATCAAGAGGTCTGACCGCCG...CTCCTCTGTAGTGTCTCCAGAAGGAAGGAAGGGGCTGCAGTGGGCCGTCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
||
| CDS-3UTR CAA 90 bp | GGGGACGAGTCCCTTAAGCCTGGACTCCCCTGGCAGTTCCAGCTTTCTTCTGAGTCGGGGACCACCTGCTaGATCTGTGGCTTCACGTAT | + |
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Preference number: 5 (lower is better) Translates to: GDESLKPGLPWQFQLSSESGTTC*ICGFTY Trigger: ATACGTGAAGCCACAGATCAAGCAGGTGGTCCCCGA...CTCAGAAGAAAGCTGGAACTGCCAGGGGAGTCCAGGCTTAAGGGACTCGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS TCA 90 bp | TCCCAGCATCTGTGGATGCATTTGCAAACTCGGGGACCACCTGCTTaGTCTGTGGCTTCACGTATCCGTCAGCTGCTTTCGCAGTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: SQHLWMHLQTRGPPA*SVASRIRQLLSQLR Trigger: CCGCAACTGCGAAAGCAGCTGACGGATACGTGAAGCCACAGATCAAGCAGGTGGTCCCCGAGTTTGCAAATGCATCCACAGATGCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS-3UTR CAA 90 bp | CGCCCAGTGTCTGGAGCCAGGACTTGGGCACAACGCACCGCCCTGACAGAAGGAGATTATCAAGATCTATaGAGTCCCAGGCTTGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: RPVSGARTWAQRTALTEGDYQDL*SPRLGF Trigger: AAAGCCAAGCCTGGGACTCAATAGATCTTGATAATC...TCCTTCTGTCAGGGCGGTGCGTTGTGCCCAAGTCCTGGCTCCAGACACTGGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS-3UTR CAA 90 bp | CTTCCTTCTGGAGACACTACAGAGGAGACTGTGGAACAAATCACCCTGAGGCTTGTCCCGTCTGGCTTGTaGATGAGCAGGTCGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: LPSGDTTEETVEQITLRLVPSGL*MSRSWA Trigger: GGCCCACGACCTGCTCATCAACAAGCCAGACGGGAC...AAGCCTCAGGGTGATTTGTTCCACAGTCTCCTCTGTAGTGTCTCCAGAAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS-3UTR CAA 90 bp | ATGCACTCACACTCACGCGCACTCCCTTCACTAGTGCCACTATGCACAGAGACACGGCGGTCAGACCTCTaGATTCGTTTCAGGGACATG | + |
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Preference number: 5 (lower is better) Translates to: MHSHSRALPSLVPLCTETRRSDL*IRFRDM Trigger: CATGTCCCTGAAACGAATCAAGAGGTCTGACCGCCG...TGTCTCTGTGCATAGTGGCACTAGTGAAGGGAGTGCGCGTGAGTGTGAGTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS-3UTR CAA 90 bp | AGAGACCAGCATGCAGATAGGGGACACACTTTCCAGTTAAAAACCTCTCCCATGAAGGTCCCGTCTGGCTaGTTGATGAGCAGGTCGTGG | + |
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Preference number: 5 (lower is better) Translates to: RDQHADRGHTFQLKTSPMKVPSG*LMSRSW Trigger: CCACGACCTGCTCATCAACAAGCCAGACGGGACCTT...CATGGGAGAGGTTTTTAACTGGAAAGTGTGTCCCCTATCTGCATGCTGGTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS-3UTR CAA 90 bp | AAGCAGAGAGGGAAGGAGCCAGTGTTAAGATGGCGGAAGTGGCAGAAACGGGAAGATTATCAAGATCTATaGAGTCCCAGGCTTGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: KQRGKEPVLRWRKWQKREDYQDL*SPRLGF Trigger: AAAGCCAAGCCTGGGACTCAATAGATCTTGATAATC...TTCCCGTTTCTGCCACTTCCGCCATCTTAACACTGGCTCCTTCCCTCTCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS CCA 72 bp | GGCACACGACTGGGGAAGGAGCCTGATCCATGTAGGTaGCGCCACTCCCAGCATCTGTGGATGCATTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: GTRLGKEPDPCR*RHSQHLWMHLQ Trigger: TTGCAAATGCATCCACAGATGCTGGGAGTGGCGCCACCTACATGGATCAGGCTCCTTCCCCAGTCGTGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS GCA 72 bp | CTGTGGCTTCACGTATCCGTCAGCTGCTTTCGCAGTTaGGGGCTCACAGGGGACCGGTGTGTAGTACTTAGA | + |
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Preference number: 6 (lower is better) Translates to: LWLHVSVSCFRS*GLTGDRCVVLR Trigger: TCTAAGTACTACACACCGGTCCCCTGTGAGCCCGCAACTGCGAAAGCAGCTGACGGATACGTGAAGCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS CAA 90 bp | CTCCCAGCATCTGTGGATGCATTTGCAAACTCGGGGACCACCTGCTaGATCTGTGGCTTCACGTATCCGTCAGCTGCTTTCGCAGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: LPASVDAFANSGTTC*ICGFTYPSAAFAVA Trigger: CGCAACTGCGAAAGCAGCTGACGGATACGTGAAGCCACAGATCAAGCAGGTGGTCCCCGAGTTTGCAAATGCATCCACAGATGCTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS GCA 72 bp | ATCCATGTAGGTGGCGCCACTCCCAGCATCTGTGGATaGATTTGCAAACTCGGGGACCACCTGCTTGATCTG | + |
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Preference number: 6 (lower is better) Translates to: IHVGGATPSICG*ICKLGDHLLDL Trigger: CAGATCAAGCAGGTGGTCCCCGAGTTTGCAAATGCATCCACAGATGCTGGGAGTGGCGCCACCTACATGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS CAA 72 bp | TCCGTTACTGACTCTGCCCCACGGCGGTCAGACCTCTaGATTCGTTTCAGGGACATGTTTCTGAAGTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: SVTDSAPRRSDL*IRFRDMFLKWA Trigger: CGCCCACTTCAGAAACATGTCCCTGAAACGAATCAAGAGGTCTGACCGCCGTGGGGCAGAGTCAGTAACGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS TCA 72 bp | CTGTGGATGCATTTGCAAACTCGGGGACCACCTGCTTaGTCTGTGGCTTCACGTATCCGTCAGCTGCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: LWMHLQTRGPPA*SVASRIRQLLS Trigger: CGAAAGCAGCTGACGGATACGTGAAGCCACAGATCAAGCAGGTGGTCCCCGAGTTTGCAAATGCATCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS CAA 90 bp | AACTTCTCTTCCGTTACTGACTCTGCCCCACGGCGGTCAGACCTCTaGATTCGTTTCAGGGACATGTTTCTGAAGTGGGCGCTGAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: NFSSVTDSAPRRSDL*IRFRDMFLKWALSV Trigger: CACACTCAGCGCCCACTTCAGAAACATGTCCCTGAAACGAATCAAGAGGTCTGACCGCCGTGGGGCAGAGTCAGTAACGGAAGAGAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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| CDS CAA 72 bp | TCTGTGGATGCATTTGCAAACTCGGGGACCACCTGCTaGATCTGTGGCTTCACGTATCCGTCAGCTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SVDAFANSGTTC*ICGFTYPSAAF Trigger: GAAAGCAGCTGACGGATACGTGAAGCCACAGATCAAGCAGGTGGTCCCCGAGTTTGCAAATGCATCCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004143.3 ENSMUST00000107358.9 |
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