Pregenerated sensors for STAT5A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004043Ensembl transcript IDs: ENSMUST00000004145.14, ENSMUST00000107356.8, ENSMUST00000107357.4, ENSMUST00000133036.8, ENSMUST00000138083.8
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCGTTAGACTTGAATCTCACGTCCATCCACCCTGGCGCAAGAACTaGCACTCGGCTGTGGCAGCCCTCTGCTGTGTTGAAGGGAACAGC | + |
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Preference number: 1 (lower is better) Translates to: AVRLESHVHPPWRKN*HSAVAALCCVEGNS Trigger: GCTGTTCCCTTCAACACAGCAGAGGGCTGCCACAGCCGAGTGTCAGTTCTTGCGCCAGGGTGGATGGACGTGAGATTCAAGTCTAACGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR CCA 90 bp | TTCCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTaGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCTGAAGCGATT | + |
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Preference number: 1 (lower is better) Translates to: FLQRGWKPGLLVGSS*LLCHSLQGRAAEAI Trigger: AATCGCTTCAGCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR TCA 90 bp | CTGGCGCAAGAACTGACACTCGGCTGTGGCAGCCCTCTGCTGTGTTaGAGGGAACAGCTTAAGCACACCGAGCAATCACAAAGTCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: LAQELTLGCGSPLLC*REQLKHTEQSQSLQ Trigger: CTGCAGACTTTGTGATTGCTCGGTGTGCTTAAGCTGTTCCCTTCAACACAGCAGAGGGCTGCCACAGCCGAGTGTCAGTTCTTGCGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR CCA 90 bp | TGGAAGGGTGAGGATATCGAATGGAGAAAAGGGATGGTGGGAACGTaGACAAGGCCGTTAGACTTGAATCTCACGTCCATCCACCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: WKGEDIEWRKGMVGT*TRPLDLNLTSIHPG Trigger: GCCAGGGTGGATGGACGTGAGATTCAAGTCTAACGGCCTTGTCCACGTTCCCACCATCCCTTTTCTCCATTCGATATCCTCACCCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR CCA 90 bp | AAAAGCAAGAAGGATGAATCCATCTGGAAGGGTGAGGATATCGAATaGAGAAAAGGGATGGTGGGAACGTGGACAAGGCCGTTAGACTTG | + |
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Preference number: 1 (lower is better) Translates to: KSKKDESIWKGEDIE*RKGMVGTWTRPLDL Trigger: CAAGTCTAACGGCCTTGTCCACGTTCCCACCATCCCTTTTCTCCATTCGATATCCTCACCCTTCCAGATGGATTCATCCTTCTTGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR TCA 90 bp | CCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGCAGAGTGGAGCAGACTaGGCGCTCCCCACCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PSERLEARTPSRLLLAALQSGAD*ALPTPF Trigger: GAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCTG...CAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR CCA 90 bp | CGCCCAGCAGAGTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTACTGACACTCGGCTGTaGCAGCCCTCTGCTGTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: RPAEWSRLSAPHPLPSDSTDTRL*QPSAVL Trigger: CAACACAGCAGAGGGCTGCCACAGCCGAGTGTCAGT...ACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCTGCTGGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCGACCACAACCCATGGTaGGACAGTGCAGGGCCCGTT | + |
|
Preference number: 2 (lower is better) Translates to: TPSRLLLAALSQPPGKSCDHNPW*DSAGPV Trigger: AACGGGCCCTGCACTGTCCCACCATGGGTTGTGGTC...GCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCCAGGAGGAGCCGACTAGGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCGGAGAAAAGGGATGGTaGGAACGTGGACAAGGCCGT | + |
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Preference number: 2 (lower is better) Translates to: TPSRLLLAALSQPPGKSCGEKGW*ERGQGR Trigger: ACGGCCTTGTCCACGTTCCCACCATCCCTTTTCTCC...GCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCCAGGAGGAGCCGACTAGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR TCA 90 bp | ACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCGAAAGGAAGAAAGGATaGGGCCACGTGTGGTCATGC | + |
|
Preference number: 2 (lower is better) Translates to: TPSRLLLAALSQPPGKSCERKKG*GHVWSC Trigger: GCATGACCACACGTGGCCTCATCCTTTCTTCCTTTC...GCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCCAGGAGGAGCCGACTAGGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR CCA 90 bp | CGCCCAGCAGAGTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTGGTGAGGATATCGAATaGAGAAAAGGGATGGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: RPAEWSRLSAPHPLPSDSGEDIE*RKGMVG Trigger: TCCCACCATCCCTTTTCTCCATTCGATATCCTCACC...ACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCTGCTGGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTGTGTACAGGAAAGGAAGAAAGGATaGGGCCACGTGTGGTCATGC | + |
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Preference number: 2 (lower is better) Translates to: RVEQTERSPPPSFRQCVQERKKG*GHVWSC Trigger: GCATGACCACACGTGGCCTCATCCTTTCTTCCTTTC...CTGTACACACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTGTGTACAGGTTGAAAGGAAGAAAGGATaGGGCCACGTGTGGTCATGC | + |
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Preference number: 2 (lower is better) Translates to: VEQTERSPPPSFRQCVQVERKKG*GHVWSC Trigger: GCATGACCACACGTGGCCTCATCCTTTCTTCCTTTC...AACCTGTACACACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCGGCCACGTGTGGTCATaGATGCCTGTAATCCTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: FLQRGWKPGLLVGSSWLLGHVWS*MPVILA Trigger: TGCTAGGATTACAGGCATGCATGACCACACGTGGCC...GAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGGCCACGTGTGGTCATaGATGCCTGTAATCCTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LLPSERLEARTPSRLLLAGHVWS*MPVILA Trigger: TGCTAGGATTACAGGCATGCATGACCACACGTGGCC...AGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR GCA 90 bp | AGGGATGGTGGGAACGTGGACAAGGCCGTTAGACTTGAATCTCACGTCCATCCACCAATCTTCCACCTGTaGGAGGACAGGAGCACACCG | + |
|
Preference number: 2 (lower is better) Translates to: RDGGNVDKAVRLESHVHPPIFHL*EDRSTP Trigger: CGGTGTGCTCCTGTCCTCGCACAGGTGGAAGATTGG...TGGATGGACGTGAGATTCAAGTCTAACGGCCTTGTCCACGTTCCCACCATCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR CAA 90 bp | GAATGGAGAAAAGGGATGGTGGGAACGTGGACAAGGCCGTTAGACTaGAATCTCACGTCCATCCACCCTGGCGCAAGAACTGACACTCGG | + |
|
Preference number: 2 (lower is better) Translates to: EWRKGMVGTWTRPLD*NLTSIHPGARTDTR Trigger: CCGAGTGTCAGTTCTTGCGCCAGGGTGGATGGACGTGAGATTCAAGTCTAACGGCCTTGTCCACGTTCCCACCATCCCTTTTCTCCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR CCA 90 bp | CGCCCAGCAGAGTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTGTGCAAAGCCATTGTTaGTATGAACAGAGATACTAC | + |
|
Preference number: 2 (lower is better) Translates to: RPAEWSRLSAPHPLPSDSVQSHC*YEQRYY Trigger: GTAGTATCTCTGTTCATACCAACAATGGCTTTGCAC...ACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCTGCTGGGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 |
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| 3UTR-3UTR CCA 90 bp | CGCCCAGCAGAGTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTCATTCATGGATAGTCTaGGATATATGGAGAGACCTT | + |
|
Preference number: 2 (lower is better) Translates to: RPAEWSRLSAPHPLPSDSHSWIV*DIWRDL Trigger: AAGGTCTCTCCATATATCCCAGACTATCCATGAATG...ACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCTGCTGGGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR TCA 90 bp | AGGGATGGTGGGAACGTGGACAAGGCCGTTAGACTTGAATCTCACGTCCATCCACAGAGATACTACAACTaGCGTGGGCTCCTCACACTG | + |
|
Preference number: 2 (lower is better) Translates to: RDGGNVDKAVRLESHVHPQRYYN*RGLLTL Trigger: CAGTGTGAGGAGCCCACGTCAGTTGTAGTATCTCTG...TGGATGGACGTGAGATTCAAGTCTAACGGCCTTGTCCACGTTCCCACCATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 |
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| 3UTR-3UTR TCA 90 bp | CGCCCAGCAGAGTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTTTTCTAGAATTTCACTaGAATGGCCATTGGACAGAA | + |
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Preference number: 2 (lower is better) Translates to: RPAEWSRLSAPHPLPSDSFLEFH*NGHWTE Trigger: TTCTGTCCAATGGCCATTTCAGTGAAATTCTAGAAA...ACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCTGCTGGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR TCA 90 bp | ACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCTATTCCCCTCCTTTCTaGTATAATAAGCAAGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: TPSRLLLAALSQPPGKSCYSPPF*YNKQGC Trigger: GCAACCTTGCTTATTATATCAGAAAGGAGGGGAATA...GCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCCAGGAGGAGCCGACTAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR TCA 90 bp | GGCCATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGGGCCCTGGGGGCCCTTaGGGTCTGAACAAAAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: GHWTEKGHRRNRFVSNDRGPGGP*GLNKKV Trigger: GACCTTTTTGTTCAGACCTCAAGGGCCCCCAGGGCC...CCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAATGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR TCA 90 bp | GAATGGAGAAAAGGGATGGTGGGAACGTGGACAAGGCCGTTAGACTTGAATCTCCAGAGATACTACAACTaGCGTGGGCTCCTCACACTG | + |
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Preference number: 2 (lower is better) Translates to: EWRKGMVGTWTRPLDLNLQRYYN*RGLLTL Trigger: CAGTGTGAGGAGCCCACGTCAGTTGTAGTATCTCTG...GAGATTCAAGTCTAACGGCCTTGTCCACGTTCCCACCATCCCTTTTCTCCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCAAGCCATTGTTGGTATaGACAGAGATACTACAACTG | + |
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Preference number: 2 (lower is better) Translates to: FLQRGWKPGLLVGSSWLLKPLLV*TEILQL Trigger: CAGTTGTAGTATCTCTGTTCATACCAACAATGGCTT...GAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGTGCAAAGCCATTGTTaGTATGAACAGAGATACTAC | + |
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Preference number: 2 (lower is better) Translates to: LLPSERLEARTPSRLLLAVQSHC*YEQRYY Trigger: GTAGTATCTCTGTTCATACCAACAATGGCTTTGCAC...AGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCACATTCATGGATAGTCTaGGATATATGGAGAGACCTT | + |
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Preference number: 2 (lower is better) Translates to: SERLEARTPSRLLLAALSHSWIV*DIWRDL Trigger: AAGGTCTCTCCATATATCCCAGACTATCCATGAATG...TGACAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR GCA 90 bp | AAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCGGCCACGTGTGGTCATaGATGCCTGTAATCCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: KYKKHPSASFREVGSQDSGHVWS*MPVILA Trigger: TGCTAGGATTACAGGCATGCATGACCACACGTGGCC...GGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAGAGGGATGCTTTTTATATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR TCA 90 bp | AATGTTGAGTTCTATGTACAAAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGCAGAGTGGAGCAGACTaGGCGCTCCCCACCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: NVEFYVQNIKSIPLLPSEQSGAD*ALPTPF Trigger: GAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCTG...CTCTGAAGGAAGCAGAGGGATGCTTTTTATATTTTGTACATAGAACTCAACATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR GCA 90 bp | AATGTTGAGTTCTATGTACAAAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGTCGGCTCCTCCTGGCTaGTCTGTCACAGCCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: NVEFYVQNIKSIPLLPSESAPPG*SVTASR Trigger: CCTGGAGGCTGTGACAGAGCAGCCAGGAGGAGCCGA...CTCTGAAGGAAGCAGAGGGATGCTTTTTATATTTTGTACATAGAACTCAACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR CCA 90 bp | AATGTTGAGTTCTATGTACAAAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGCTAGTCGGCTCCTCCTaGCTGCTCTGTCACAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: NVEFYVQNIKSIPLLPSELVGSS*LLCHSL Trigger: GAGGCTGTGACAGAGCAGCCAGGAGGAGCCGACTAG...CTCTGAAGGAAGCAGAGGGATGCTTTTTATATTTTGTACATAGAACTCAACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR GCA 90 bp | AATGTTGAGTTCTATGTACAAAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGCCAATCTTCCACCTGTaGGAGGACAGGAGCACACCG | + |
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Preference number: 2 (lower is better) Translates to: NVEFYVQNIKSIPLLPSEPIFHL*EDRSTP Trigger: CGGTGTGCTCCTGTCCTCGCACAGGTGGAAGATTGG...CTCTGAAGGAAGCAGAGGGATGCTTTTTATATTTTGTACATAGAACTCAACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR TCA 90 bp | GGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGTTCAGCTAAGCCATTGTTGGTATaGACAGAGATACTACAACTG | + |
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Preference number: 2 (lower is better) Translates to: GQKKDTGEIGLSAMIGSAKPLLV*TEILQL Trigger: CAGTTGTAGTATCTCTGTTCATACCAACAATGGCTT...AGCTGAACCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 |
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| 3UTR-3UTR TCA 90 bp | AAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCTTTCTAGAATTTCACTaGAATGGCCATTGGACAGAA | + |
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Preference number: 2 (lower is better) Translates to: KYKKHPSASFREVGSQDSFLEFH*NGHWTE Trigger: TTCTGTCCAATGGCCATTTCAGTGAAATTCTAGAAA...GGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAGAGGGATGCTTTTTATATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR CCA 90 bp | AAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCATAGTCTGGGATATATaGAGAGACCTTGTCTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: KYKKHPSASFREVGSQDSIVWDI*RDLVSK Trigger: TTTTGAGACAAGGTCTCTCCATATATCCCAGACTAT...GGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAGAGGGATGCTTTTTATATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR CCA 72 bp | AGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTaGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: RGWKPGLLVGSS*LLCHSLQGRAA Trigger: AGCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR CAA 90 bp | CTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTAGGCCCTGGGGGCCCTaGAGGTCTGAACAAAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: LLPSERLEARTPSRLLLARPWGP*RSEQKG Trigger: ACCTTTTTGTTCAGACCTCAAGGGCCCCCAGGGCCT...AGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR CAA 90 bp | AGCCTCCAGGGAAGAGCTGCTGAAGCGATTTCTGAGACCACAACCCATGGTGGGAGGCCCTGGGGGCCCTaGAGGTCTGAACAAAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: SLQGRAAEAISETTTHGGRPWGP*RSEQKG Trigger: ACCTTTTTGTTCAGACCTCAAGGGCCCCCAGGGCCT...CCCACCATGGGTTGTGGTCTCAGAAATCGCTTCAGCAGCTCTTCCCTGGAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR TCA 72 bp | CTTGAATCTCACGTCCATCCACCCTGGCGCAAGAACTaGCACTCGGCTGTGGCAGCCCTCTGCTGTGTTGAA | + |
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Preference number: 3 (lower is better) Translates to: LESHVHPPWRKN*HSAVAALCCVE Trigger: TTCAACACAGCAGAGGGCTGCCACAGCCGAGTGTCAGTTCTTGCGCCAGGGTGGATGGACGTGAGATTCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR TCA 72 bp | GAACTGACACTCGGCTGTGGCAGCCCTCTGCTGTGTTaGAGGGAACAGCTTAAGCACACCGAGCAATCACAA | + |
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Preference number: 3 (lower is better) Translates to: ELTLGCGSPLLC*REQLKHTEQSQ Trigger: TTGTGATTGCTCGGTGTGCTTAAGCTGTTCCCTTCAACACAGCAGAGGGCTGCCACAGCCGAGTGTCAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR CAA 90 bp | GGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCTGAAGCGATTTCTGAGACCATCACTGAAATGGCCATaGGACAGAAAAAGGACACCG | + |
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Preference number: 3 (lower is better) Translates to: GCSVTASREELLKRFLRPSLKWP*DRKRTP Trigger: CGGTGTCCTTTTTCTGTCCAATGGCCATTTCAGTGA...TGGTCTCAGAAATCGCTTCAGCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR-3UTR CAA 90 bp | AAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCAGGCCCTGGGGGCCCTaGAGGTCTGAACAAAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: KYKKHPSASFREVGSQDSRPWGP*RSEQKG Trigger: ACCTTTTTGTTCAGACCTCAAGGGCCCCCAGGGCCT...GGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAGAGGGATGCTTTTTATATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| 3UTR CCA 72 bp | AAGGATGAATCCATCTGGAAGGGTGAGGATATCGAATaGAGAAAAGGGATGGTGGGAACGTGGACAAGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: KDESIWKGEDIE*RKGMVGTWTRP Trigger: CGGCCTTGTCCACGTTCCCACCATCCCTTTTCTCCATTCGATATCCTCACCCTTCCAGATGGATTCATCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| 3UTR CCA 72 bp | GAGGATATCGAATGGAGAAAAGGGATGGTGGGAACGTaGACAAGGCCGTTAGACTTGAATCTCACGTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: EDIEWRKGMVGT*TRPLDLNLTSI Trigger: GATGGACGTGAGATTCAAGTCTAACGGCCTTGTCCACGTTCCCACCATCCCTTTTCTCCATTCGATATCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| 3UTR TCA 72 bp | CCTAAACCTGCCTCCCTGCCTTTTCTAGAATTTCACTaGAATGGCCATTGGACAGAAAAAGGACACCGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PKPASLPFLEFH*NGHWTEKGHRR Trigger: TCTCCGGTGTCCTTTTTCTGTCCAATGGCCATTTCAGTGAAATTCTAGAAAAGGCAGGGAGGCAGGTTTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| 3UTR TCA 72 bp | CGTATGTATACACAAAGGTATAAAGGGTCACTAAGATaGACCCCAATCTTCCACCTGTGCGAGGACAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RMYTQRYKGSLR*TPIFHLCEDRS Trigger: GCTCCTGTCCTCGCACAGGTGGAAGATTGGGGTTCATCTTAGTGACCCTTTATACCTTTGTGTATACATACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| 3UTR TCA 72 bp | TTCCTCCTCCCAGACCCCCAGTATTCCCCTCCTTTCTaGTATAATAAGCAAGGTTGCAAACAGGAAAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FLLPDPQYSPPF*YNKQGCKQERK Trigger: CTTCCTTTCCTGTTTGCAACCTTGCTTATTATATCAGAAAGGAGGGGAATACTGGGGGTCTGGGAGGAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| 3UTR TCA 72 bp | CAAAGCCATTGTTGGTATGAACAGAGATACTACAACTaGCGTGGGCTCCTCACACTGAAGGTGGTTTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: QSHCWYEQRYYN*RGLLTLKVVFQ Trigger: TTGGAAAACCACCTTCAGTGTGAGGAGCCCACGTCAGTTGTAGTATCTCTGTTCATACCAACAATGGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGTTGAGTTCTATGTACAAAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGTCACTGAAATGGCCATaGGACAGAAAAAGGACACCG | + |
|
Preference number: 3 (lower is better) Translates to: NVEFYVQNIKSIPLLPSESLKWP*DRKRTP Trigger: CGGTGTCCTTTTTCTGTCCAATGGCCATTTCAGTGA...CTCTGAAGGAAGCAGAGGGATGCTTTTTATATTTTGTACATAGAACTCAACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | CGCCCAGCAGAGTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTGGTGCTTCTGGGACATaGCGTCAACCAGGACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPAEWSRLSAPHPLPSDSGASGT*RQPGHQ Trigger: CTGGTGTCCTGGTTGACGCCATGTCCCAGAAGCACC...ACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCTGCTGGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | ACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCGCAAGTTCTCCCGGTTaGACTGGGACCAGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: TPSRLLLAALSQPPGKSCASSPG*TGTRTQ Trigger: CTGTGTCCTGGTCCCAGTTCAACCGGGAGAACTTGC...GCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCCAGGAGGAGCCGACTAGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | CGCCCAGCAGAGTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTGACAGGGTCTTCACCTaGAACACCAGCTCGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPAEWSRLSAPHPLPSDSDRVFT*NTSSLL Trigger: CAGCAACGAGCTGGTGTTCCAGGTGAAGACCCTGTC...ACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCTGCTGGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCACCTGGTCCATGTAGGTaGCGCTGGCTCCGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SERLEARTPSRLLLAALSPGPCR*RWLRHL Trigger: CAGATGCCGGAGCCAGCGCCACCTACATGGACCAGG...TGACAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR GCA 90 bp | ACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCAGGTCGTGGGCCTGTTaGTTGTTCACGAAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPSRLLLAALSQPPGKSCRSWAC*LFTKPR Trigger: CCTGGGTTTCGTGAACAAGCAACAGGCCCACGACCT...GCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCCAGGAGGAGCCGACTAGGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | GTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTGTGTACAGGTTATAGCATCCCACGGCTaGCTCTCGATCCACTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VEQTERSPPPSFRQCVQVIASHG*LSIHWA Trigger: GGCCCAGTGGATCGAGAGCCAGCCGTGGGATGCTAT...AACCTGTACACACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | CCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGGTGCCAGTGGCCTGGTaGTACTCCATGACGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PSERLEARTPSRLLLAALVPVAW*YSMTQQ Trigger: CTGTTGCGTCATGGAGTACCACCAGGCCACTGGCAC...CAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | CGCCCAGCAGAGTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTCGTCGAGACTGTCCATaGGCCGGCGTAAAAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPAEWSRLSAPHPLPSDSRRDCP*AGVKVL Trigger: AAGAACTTTTACGCCGGCCCATGGACAGTCTCGACG...ACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCTGCTGGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | CTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCAAGTTCTCCCGGTTaGACTGGGACCAGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPSERLEARTPSRLLLAASSPG*TGTRTQ Trigger: CTGTGTCCTGGTCCCAGTTCAACCGGGAGAACTTGC...AGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR GCA 90 bp | ATCCACCCTGGCGCAAGAACTGACACTCGGCTGTGGCAGCCCTCTGCTGTGTTGAGGTCGTGGGCCTGTTaGTTGTTCACGAAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHPGARTDTRLWQPSAVLRSWAC*LFTKPR Trigger: CCTGGGTTTCGTGAACAAGCAACAGGCCCACGACCT...CAACACAGCAGAGGGCTGCCACAGCCGAGTGTCAGTTCTTGCGCCAGGGTGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | ATCCACCCTGGCGCAAGAACTGACACTCGGCTGTGGCAGCCCTCTGCTGTGTTGGGGAGCTGCAATTGTTaGCTTCGCGAACCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IHPGARTDTRLWQPSAVLGSCNC*LREPAS Trigger: AGAGGCTGGTTCGCGAAGCCAACAATTGCAGCTCCC...CAACACAGCAGAGGGCTGCCACAGCCGAGTGTCAGTTCTTGCGCCAGGGTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTGTGTACAGGGTGCTTCTGGGACATaGCGTCAACCAGGACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVEQTERSPPPSFRQCVQGASGT*RQPGHQ Trigger: CTGGTGTCCTGGTTGACGCCATGTCCCAGAAGCACC...CTGTACACACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | GGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCTGAAGCGATTTCTGAGACCAGCAAGTTCTCCCGGTTaGACTGGGACCAGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: GCSVTASREELLKRFLRPASSPG*TGTRTQ Trigger: CTGTGTCCTGGTCCCAGTTCAACCGGGAGAACTTGC...TGGTCTCAGAAATCGCTTCAGCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCAAGTGCCGGACCTCGATaGGGAAATGCTGCCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: SERLEARTPSRLLLAALSSAGPR*GNAAHT Trigger: TGTATGGGCAGCATTTCCCCATCGAGGTCCGGCACT...TGACAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCACAAAGACCTCGTCCTTaGGTCGGTCTGGGAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: SERLEARTPSRLLLAALSQRPRP*VGLGTR Trigger: ACGTGTTCCCAGACCGACCCAAGGACGAGGTCTTTG...TGACAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | ACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCGTTCTTCCACGTGCCTaGCAACATCCATGCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPSRLLLAALSQPPGKSCVLPRA*QHPCSH Trigger: ATGAGAGCATGGATGTTGCCAGGCACGTGGAAGAAC...GCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCCAGGAGGAGCCGACTAGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | CCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGCGTCGAGACTGTCCATaGGCCGGCGTAAAAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSERLEARTPSRLLLAALRRDCP*AGVKVL Trigger: AAGAACTTTTACGCCGGCCCATGGACAGTCTCGACG...CAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | CCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGCCTCAAACCTTTGGTTaGTCTGAAGGTGCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSERLEARTPSRLLLAALPQTFG*SEGASG Trigger: CCCAGAAGCACCTTCAGATCAACCAAAGGTTTGAGG...CAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | GTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTGTGTACAGGTTACTCAAACAGGACTGTaGACTTCTCCTCCGTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: VEQTERSPPPSFRQCVQVTQTGL*TSPPSP Trigger: CGGTGACGGAGGAGAAGTTCACAGTCCTGTTTGAGT...AACCTGTACACACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | TTCCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCCTGCCAACGCTGAACTaGGACTCAAACAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLQRGWKPGLLVGSSWLLLPTLN*DSNRTV Trigger: CACAGTCCTGTTTGAGTCTCAGTTCAGCGTTGGCAG...GAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR GCA 90 bp | ATCCACCCTGGCGCAAGAACTGACACTCGGCTGTGGCAGCCCTCTGCTGTGTTGTACTCTTGGGTCTGCTaGAGCTTCTTCAGCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHPGARTDTRLWQPSAVLYSWVC*SFFSSF Trigger: GAACGAGCTGAAGAAGCTGCAGCAGACCCAAGAGTA...CAACACAGCAGAGGGCTGCCACAGCCGAGTGTCAGTTCTTGCGCCAGGGTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGAAGTACTCTTGGGTCTaGTGCAGCTTCTTCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PSERLEARTPSRLLLAALKYSWV*CSFFSS Trigger: CGAGCTGAAGAAGCTGCAGCAGACCCAAGAGTACTT...CAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR GCA 90 bp | ATCCACCCTGGCGCAAGAACTGACACTCGGCTGTGGCAGCCCTCTGCTGTGTTGGCCTGGCAACATCCATaGTCTCATCCAGGTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: IHPGARTDTRLWQPSAVLAWQHP*SHPGQT Trigger: AGTTTGACCTGGATGAGAGCATGGATGTTGCCAGGC...CAACACAGCAGAGGGCTGCCACAGCCGAGTGTCAGTTCTTGCGCCAGGGTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGGCCTGGCAACATCCATaGTCTCATCCAGGTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PSERLEARTPSRLLLAALAWQHP*SHPGQT Trigger: AGTTTGACCTGGATGAGAGCATGGATGTTGCCAGGC...CAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCTGAAGCGATTTCTGAGACCAAGTGCCGGACCTCGATaGGGAAATGCTGCCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: GCSVTASREELLKRFLRPSAGPR*GNAAHT Trigger: TGTATGGGCAGCATTTCCCCATCGAGGTCCGGCACT...TGGTCTCAGAAATCGCTTCAGCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | AGCCTCCAGGGAAGAGCTGCTGAAGCGATTTCTGAGACCACAACCCATGGTGGGGGGAGCTGCAATTGTTaGCTTCGCGAACCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLQGRAAEAISETTTHGGGSCNC*LREPAS Trigger: AGAGGCTGGTTCGCGAAGCCAACAATTGCAGCTCCC...CCCACCATGGGTTGTGGTCTCAGAAATCGCTTCAGCAGCTCTTCCCTGGAGGCT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCCCTTGAGGTCTGAACAAAAAGGTCACCACCGCTTTAGCCACAAACCCGGTGCTTCTGGGACATaGCGTCAACCAGGACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: WGPLRSEQKGHHRFSHKPGASGT*RQPGHQ Trigger: CTGGTGTCCTGGTTGACGCCATGTCCCAGAAGCACC...GGGTTTGTGGCTAAAGCGGTGGTGACCTTTTTGTTCAGACCTCAAGGGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCTGAAGCGATTTCTGAGACCACAAAGACCTCGTCCTTaGGTCGGTCTGGGAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: GCSVTASREELLKRFLRPQRPRP*VGLGTR Trigger: ACGTGTTCCCAGACCGACCCAAGGACGAGGTCTTTG...TGGTCTCAGAAATCGCTTCAGCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCCCTTGAGGTCTGAACAAAAAGGTCACCACCGCTTTAGCCACAAACCCTTGAGGGCACACGACTaGGGAAGGAGCCTGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WGPLRSEQKGHHRFSHKPLRAHD*GRSLVH Trigger: ATGGACCAGGCTCCTTCCCCAGTCGTGTGCCCTCAA...GGGTTTGTGGCTAAAGCGGTGGTGACCTTTTTGTTCAGACCTCAAGGGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | CTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTTCGTTGTACAGAATGTaGCGGATACAGCGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLPSERLEARTPSRLLLASLYRM*RIQRTS Trigger: GCTGGTTCGCTGTATCCGTCACATTCTGTACAACGA...AGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | TCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCACCTCAAACCTTTGGTTaGTCTGAAGGTGCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SERLEARTPSRLLLAALSPQTFG*SEGASG Trigger: CCCAGAAGCACCTTCAGATCAACCAAAGGTTTGAGG...TGACAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR GCA 90 bp | TCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCATACTCTTGGGTCTGCTaGAGCTTCTTCAGCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SERLEARTPSRLLLAALSYSWVC*SFFSSF Trigger: GAACGAGCTGAAGAAGCTGCAGCAGACCCAAGAGTA...TGACAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTGTGTACAGAAGTACTCTTGGGTCTaGTGCAGCTTCTTCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RVEQTERSPPPSFRQCVQKYSWV*CSFFSS Trigger: CGAGCTGAAGAAGCTGCAGCAGACCCAAGAGTACTT...CTGTACACACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR GCA 90 bp | TGGGGGCCCTTGAGGTCTGAACAAAAAGGTCACCACCGCTTTAGCCACAAACCCAGGTCGTGGGCCTGTTaGTTGTTCACGAAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WGPLRSEQKGHHRFSHKPRSWAC*LFTKPR Trigger: CCTGGGTTTCGTGAACAAGCAACAGGCCCACGACCT...GGGTTTGTGGCTAAAGCGGTGGTGACCTTTTTGTTCAGACCTCAAGGGCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCCCTTGAGGTCTGAACAAAAAGGTCACCACCGCTTTAGCCACAAACCCCAAAGACCTCGTCCTTaGGTCGGTCTGGGAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: WGPLRSEQKGHHRFSHKPQRPRP*VGLGTR Trigger: ACGTGTTCCCAGACCGACCCAAGGACGAGGTCTTTG...GGGTTTGTGGCTAAAGCGGTGGTGACCTTTTTGTTCAGACCTCAAGGGCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCTGAAGCGATTTCTGAGACCAGGACAGGGTCAGGGTTaGGTGGGTACATGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GCSVTASREELLKRFLRPGQGQG*VGTCCS Trigger: ACTACAACATGTACCCACCCAACCCTGACCCTGTCC...TGGTCTCAGAAATCGCTTCAGCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCAGTTCTTCCACGTGCCTaGCAACATCCATGCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SERLEARTPSRLLLAALSVLPRA*QHPCSH Trigger: ATGAGAGCATGGATGTTGCCAGGCACGTGGAAGAAC...TGACAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCTGAAGCGATTTCTGAGACCAGCCTGGCAACATCCATaGTCTCATCCAGGTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GCSVTASREELLKRFLRPAWQHP*SHPGQT Trigger: AGTTTGACCTGGATGAGAGCATGGATGTTGCCAGGC...TGGTCTCAGAAATCGCTTCAGCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCACAGGAGTGTAATACTTaGCAAAGACCTCGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SERLEARTPSRLLLAALSQECNT*QRPRPW Trigger: CCAAGGACGAGGTCTTTGCCAAGTATTACACTCCTG...TGACAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | GTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTGTGTACAGGTTCAGGAGTGTAATACTTaGCAAAGACCTCGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VEQTERSPPPSFRQCVQVQECNT*QRPRPW Trigger: CCAAGGACGAGGTCTTTGCCAAGTATTACACTCCTG...AACCTGTACACACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | AGCCTCCAGGGAAGAGCTGCTGAAGCGATTTCTGAGACCACAACCCATGGTGGGGTTCTTCCACGTGCCTaGCAACATCCATGCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLQGRAAEAISETTTHGGVLPRA*QHPCSH Trigger: ATGAGAGCATGGATGTTGCCAGGCACGTGGAAGAAC...CCCACCATGGGTTGTGGTCTCAGAAATCGCTTCAGCAGCTCTTCCCTGGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| 3UTR CAA 72 bp | AAAGGGATGGTGGGAACGTGGACAAGGCCGTTAGACTaGAATCTCACGTCCATCCACCCTGGCGCAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KGMVGTWTRPLD*NLTSIHPGART Trigger: AGTTCTTGCGCCAGGGTGGATGGACGTGAGATTCAAGTCTAACGGCCTTGTCCACGTTCCCACCATCCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | TGGGGGCCCTTGAGGTCTGAACAAAAAGGTCACCACCGCTTTAGCCACAAACCCCCTCAAACCTTTGGTTaGTCTGAAGGTGCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WGPLRSEQKGHHRFSHKPPQTFG*SEGASG Trigger: CCCAGAAGCACCTTCAGATCAACCAAAGGTTTGAGG...GGGTTTGTGGCTAAAGCGGTGGTGACCTTTTTGTTCAGACCTCAAGGGCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | AGGGATGGTGGGAACGTGGACAAGGCCGTTAGACTTGAATCTCACGTCCATCCACGTTGCTGCCAACGCTaGACTGAGACTCAAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RDGGNVDKAVRLESHVHPRCCQR*TETQTG Trigger: TCCTGTTTGAGTCTCAGTTCAGCGTTGGCAGCAACG...TGGATGGACGTGAGATTCAAGTCTAACGGCCTTGTCCACGTTCCCACCATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | AGCTTAGGAGTAAAACTCCAACTTAGTTGCCTAAACCTGCCTCCCTGCCTTTTCCCTGGTCCATGTAGGTaGCGCTGGCTCCGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLGVKLQLSCLNLPPCLFPGPCR*RWLRHL Trigger: CAGATGCCGGAGCCAGCGCCACCTACATGGACCAGG...GAAAAGGCAGGGAGGCAGGTTTAGGCAACTAAGTTGGAGTTTTACTCCTAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | GAGCAATCACAAAGTCTGCAGCCCGTATGTATACACAAAGGTATAAAGGGTCACAGGAGTTGGGTGGCCTaGCCTCGGTCCTGGGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: EQSQSLQPVCIHKGIKGHRSWVA*PRSWGL Trigger: TAATCCCCAGGACCGAGGTCAGGCCACCCAACTCCT...GTGACCCTTTATACCTTTGTGTATACATACGGGCTGCAGACTTTGTGATTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | GAATGGAGAAAAGGGATGGTGGGAACGTGGACAAGGCCGTTAGACTTGAATCTCACTCAAACAGGACTGTaGACTTCTCCTCCGTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: EWRKGMVGTWTRPLDLNLTQTGL*TSPPSP Trigger: CGGTGACGGAGGAGAAGTTCACAGTCCTGTTTGAGT...GAGATTCAAGTCTAACGGCCTTGTCCACGTTCCCACCATCCCTTTTCTCCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | GGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGTTCAGCTATAGCATCCCACGGCTaGCTCTCGATCCACTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQKKDTGEIGLSAMIGSAIASHG*LSIHWA Trigger: GGCCCAGTGGATCGAGAGCCAGCCGTGGGATGCTAT...AGCTGAACCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | GGCCATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGTTGAGGGCACACGACTaGGGAAGGAGCCTGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GHWTEKGHRRNRFVSNDRLRAHD*GRSLVH Trigger: ATGGACCAGGCTCCTTCCCCAGTCGTGTGCCCTCAA...CCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAATGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| 3UTR CAA 72 bp | AATATAAAAAGCATCCCTCTGCTTCCTTCAGAGAGGTaGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NIKSIPLLPSER*EARTPSRLLLA Trigger: AGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAGAGGGATGCTTTTTATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | TTCACTGAAATGGCCATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAAGGAGTTGGGTGGCCTaGCCTCGGTCCTGGGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: FTEMAIGQKKDTGEIGLSRSWVA*PRSWGL Trigger: TAATCCCCAGGACCGAGGTCAGGCCACCCAACTCCT...TGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAATGGCCATTTCAGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | AAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCGACAGGGTCTTCACCTaGAACACCAGCTCGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KYKKHPSASFREVGSQDSDRVFT*NTSSLL Trigger: CAGCAACGAGCTGGTGTTCCAGGTGAAGACCCTGTC...GGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAGAGGGATGCTTTTTATATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | GGCCATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGGACAGGGTCTTCACCTaGAACACCAGCTCGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GHWTEKGHRRNRFVSNDRDRVFT*NTSSLL Trigger: CAGCAACGAGCTGGTGTTCCAGGTGAAGACCCTGTC...CCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAATGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | ATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGTTCACCTGGTCCATGTAGGTaGCGCTGGCTCCGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: IGQKKDTGEIGLSAMIGSPGPCR*RWLRHL Trigger: CAGATGCCGGAGCCAGCGCCACCTACATGGACCAGG...TGAACCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | AGGGATGGTGGGAACGTGGACAAGGCCGTTAGACTTGAATCTCACGTCCATCCACTTGATTCTTTTCAGTaGCATGTTTCTGAAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RDGGNVDKAVRLESHVHPLDSFQ*HVSEVG Trigger: GCCCACTTCAGAAACATGTCACTGAAAAGAATCAAG...TGGATGGACGTGAGATTCAAGTCTAACGGCCTTGTCCACGTTCCCACCATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | GAGCAATCACAAAGTCTGCAGCCCGTATGTATACACAAAGGTATAAAGGGTCACAGTGCCGGACCTCGATaGGGAAATGCTGCCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: EQSQSLQPVCIHKGIKGHSAGPR*GNAAHT Trigger: TGTATGGGCAGCATTTCCCCATCGAGGTCCGGCACT...GTGACCCTTTATACCTTTGTGTATACATACGGGCTGCAGACTTTGTGATTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | TTCACTGAAATGGCCATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCATTGAGGGCACACGACTaGGGAAGGAGCCTGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTEMAIGQKKDTGEIGLSLRAHD*GRSLVH Trigger: ATGGACCAGGCTCCTTCCCCAGTCGTGTGCCCTCAA...TGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAATGGCCATTTCAGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | GGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGTTCAGCTCTGCCAACGCTGAACTaGGACTCAAACAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQKKDTGEIGLSAMIGSALPTLN*DSNRTV Trigger: CACAGTCCTGTTTGAGTCTCAGTTCAGCGTTGGCAG...AGCTGAACCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | GGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGTTCAGCTCGTTGCTGCCAACGCTaGACTGAGACTCAAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQKKDTGEIGLSAMIGSARCCQR*TETQTG Trigger: TCCTGTTTGAGTCTCAGTTCAGCGTTGGCAGCAACG...AGCTGAACCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR GCA 90 bp | AGCTTAGGAGTAAAACTCCAACTTAGTTGCCTAAACCTGCCTCCCTGCCTTTTCAAGTACTCTTGGGTCTaGTGCAGCTTCTTCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLGVKLQLSCLNLPPCLFKYSWV*CSFFSS Trigger: CGAGCTGAAGAAGCTGCAGCAGACCCAAGAGTACTT...GAAAAGGCAGGGAGGCAGGTTTAGGCAACTAAGTTGGAGTTTTACTCCTAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CCA 90 bp | AAAAGCAAGAAGGATGAATCCATCTGGAAGGGTGAGGATATCGAATGGAGAAAAGTGCCAGTGGCCTGGTaGTACTCCATGACGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KSKKDESIWKGEDIEWRKVPVAW*YSMTQQ Trigger: CTGTTGCGTCATGGAGTACCACCAGGCCACTGGCAC...TTTTCTCCATTCGATATCCTCACCCTTCCAGATGGATTCATCCTTCTTGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CCA 90 bp | ATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGTTCAGTGCCAGTGGCCTGGTaGTACTCCATGACGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: IGQKKDTGEIGLSAMIGSVPVAW*YSMTQQ Trigger: CTGTTGCGTCATGGAGTACCACCAGGCCACTGGCAC...TGAACCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | AAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCGCCCCATCATTCCAATaGGGCTTATGGTGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KYKKHPSASFREVGSQDSAPSFQ*GLWCFF Trigger: GAAGAAGCACCATAAGCCCCATTGGAATGATGGGGC...GGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAGAGGGATGCTTTTTATATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | AGCTTAGGAGTAAAACTCCAACTTAGTTGCCTAAACCTGCCTCCCTGCCTTTTCGCCCCATCATTCCAATaGGGCTTATGGTGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLGVKLQLSCLNLPPCLFAPSFQ*GLWCFF Trigger: GAAGAAGCACCATAAGCCCCATTGGAATGATGGGGC...GAAAAGGCAGGGAGGCAGGTTTAGGCAACTAAGTTGGAGTTTTACTCCTAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | GGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGTTCAGCTGGACAGGGTCAGGGTTaGGTGGGTACATGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GQKKDTGEIGLSAMIGSAGQGQG*VGTCCS Trigger: ACTACAACATGTACCCACCCAACCCTGACCCTGTCC...AGCTGAACCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | GAGCAATCACAAAGTCTGCAGCCCGTATGTATACACAAAGGTATAAAGGGTCACCGTCGAGACTGTCCATaGGCCGGCGTAAAAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EQSQSLQPVCIHKGIKGHRRDCP*AGVKVL Trigger: AAGAACTTTTACGCCGGCCCATGGACAGTCTCGACG...GTGACCCTTTATACCTTTGTGTATACATACGGGCTGCAGACTTTGTGATTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | GGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGTTCAGCTTCGTTGTACAGAATGTaGCGGATACAGCGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQKKDTGEIGLSAMIGSASLYRM*RIQRTS Trigger: GCTGGTTCGCTGTATCCGTCACATTCTGTACAACGA...AGCTGAACCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR GCA 90 bp | AGCTTAGGAGTAAAACTCCAACTTAGTTGCCTAAACCTGCCTCCCTGCCTTTTCTCGATGGGGAAATGCTaGCCATACAACACTTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SLGVKLQLSCLNLPPCLFSMGKC*PYNTCI Trigger: GATGCAAGTGTTGTATGGGCAGCATTTCCCCATCGA...GAAAAGGCAGGGAGGCAGGTTTAGGCAACTAAGTTGGAGTTTTACTCCTAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | AATGTTGAGTTCTATGTACAAAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGAGGAGTTGGGTGGCCTaGCCTCGGTCCTGGGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: NVEFYVQNIKSIPLLPSERSWVA*PRSWGL Trigger: TAATCCCCAGGACCGAGGTCAGGCCACCCAACTCCT...CTCTGAAGGAAGCAGAGGGATGCTTTTTATATTTTGTACATAGAACTCAACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | AAAAGCAAGAAGGATGAATCCATCTGGAAGGGTGAGGATATCGAATGGAGAAAACTGCCAACGCTGAACTaGGACTCAAACAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSKKDESIWKGEDIEWRKLPTLN*DSNRTV Trigger: CACAGTCCTGTTTGAGTCTCAGTTCAGCGTTGGCAG...TTTTCTCCATTCGATATCCTCACCCTTCCAGATGGATTCATCCTTCTTGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | ATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGTTCACGTTGCTGCCAACGCTaGACTGAGACTCAAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IGQKKDTGEIGLSAMIGSRCCQR*TETQTG Trigger: TCCTGTTTGAGTCTCAGTTCAGCGTTGGCAGCAACG...TGAACCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | AAAAGCAAGAAGGATGAATCCATCTGGAAGGGTGAGGATATCGAATGGAGAAAAGGACAGGGTCAGGGTTaGGTGGGTACATGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KSKKDESIWKGEDIEWRKGQGQG*VGTCCS Trigger: ACTACAACATGTACCCACCCAACCCTGACCCTGTCC...TTTTCTCCATTCGATATCCTCACCCTTCCAGATGGATTCATCCTTCTTGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| 3UTR CAA 72 bp | GCCATTGGACAGAAAAAGGACACCGGAGAAATAGGTTaGTCAGCAATGATAGGTTCAGCTCTTACACGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AIGQKKDTGEIG*SAMIGSALTRE Trigger: CTCTCGTGTAAGAGCTGAACCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAATGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | GGCCATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGCTTGATTCTTTTCAGTaGCATGTTTCTGAAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GHWTEKGHRRNRFVSNDRLDSFQ*HVSEVG Trigger: GCCCACTTCAGAAACATGTCACTGAAAAGAATCAAG...CCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAATGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR TCA 90 bp | AAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCCTTGATTCTTTTCAGTaGCATGTTTCTGAAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KYKKHPSASFREVGSQDSLDSFQ*HVSEVG Trigger: GCCCACTTCAGAAACATGTCACTGAAAAGAATCAAG...GGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAGAGGGATGCTTTTTATATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | TTCACTGAAATGGCCATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCACAGGAGTGTAATACTTaGCAAAGACCTCGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTEMAIGQKKDTGEIGLSQECNT*QRPRPW Trigger: CCAAGGACGAGGTCTTTGCCAAGTATTACACTCCTG...TGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAATGGCCATTTCAGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR GCA 90 bp | ATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGTTCATCGATGGGGAAATGCTaGCCATACAACACTTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: IGQKKDTGEIGLSAMIGSSMGKC*PYNTCI Trigger: GATGCAAGTGTTGTATGGGCAGCATTTCCCCATCGA...TGAACCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
||
| CDS-3UTR CCA 90 bp | AATGTTGAGTTCTATGTACAAAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGGGGAGCTGCAATTGTTaGCTTCGCGAACCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVEFYVQNIKSIPLLPSEGSCNC*LREPAS Trigger: AGAGGCTGGTTCGCGAAGCCAACAATTGCAGCTCCC...CTCTGAAGGAAGCAGAGGGATGCTTTTTATATTTTGTACATAGAACTCAACATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR GCA 90 bp | AATGTTGAGTTCTATGTACAAAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGTCGATGGGGAAATGCTaGCCATACAACACTTGCATC | + |
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Preference number: 4 (lower is better) Translates to: NVEFYVQNIKSIPLLPSESMGKC*PYNTCI Trigger: GATGCAAGTGTTGTATGGGCAGCATTTCCCCATCGA...CTCTGAAGGAAGCAGAGGGATGCTTTTTATATTTTGTACATAGAACTCAACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | CCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGCAGGCCCTCCAGGAGTaGGGTGGCCTGACCTCGGTC | + |
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Preference number: 5 (lower is better) Translates to: PSERLEARTPSRLLLAALQALQE*GGLTSV Trigger: GACCGAGGTCAGGCCACCCAACTCCTGGAGGGCCTG...CAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | AGAGTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTGTGTACAGCAGGCCCTCCAGGAGTaGGGTGGCCTGACCTCGGTC | + |
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Preference number: 5 (lower is better) Translates to: RVEQTERSPPPSFRQCVQQALQE*GGLTSV Trigger: GACCGAGGTCAGGCCACCCAACTCCTGGAGGGCCTG...CTGTACACACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCACTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | CTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGTCCCGTCCGGCTTGTaGATGAGCAGGTCGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: LLPSERLEARTPSRLLLAVPSGL*MSRSWA Trigger: GGCCCACGACCTGCTCATCAACAAGCCGGACGGGAC...AGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | GTGGAGCAGACTGAGCGCTCCCCACCCCCTTCCTTCAGACAGTGTGTACAGGTTGTCCCGTCCGGCTTGTaGATGAGCAGGTCGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: VEQTERSPPPSFRQCVQVVPSGL*MSRSWA Trigger: GGCCCACGACCTGCTCATCAACAAGCCGGACGGGAC...AACCTGTACACACTGTCTGAAGGAAGGGGGTGGGGAGCGCTCAGTCTGCTCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS CCA 90 bp | ACGGCTGGCTCTCGATCCACTGGGCCAGGTAGTGCCGGACCTCGATaGGGAAATGCTGCCCATACAACACTTGCATCTGGCGCAGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: TAGSRSTGPGSAGPR*GNAAHTTLASGAGH Trigger: ATGCCCTGCGCCAGATGCAAGTGTTGTATGGGCAGCATTTCCCCATCGAGGTCCGGCACTACCTGGCCCAGTGGATCGAGAGCCAGCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 ENSMUST00000133036.8 ENSMUST00000138083.8 |
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| CDS-3UTR CAA 90 bp | ACTCCTAGTCGGCTCCTCCTGGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCCAGGTCGTGGGCCTGTaGCTTGTTCACGAAACCCAG | + |
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Preference number: 5 (lower is better) Translates to: TPSRLLLAALSQPPGKSCQVVGL*LVHETQ Trigger: CTGGGTTTCGTGAACAAGCAACAGGCCCACGACCTG...GCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCCAGGAGGAGCCGACTAGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | CCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCTCTGCAGGTCGTGGGCCTGTaGCTTGTTCACGAAACCCAG | + |
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Preference number: 5 (lower is better) Translates to: PSERLEARTPSRLLLAALQVVGL*LVHETQ Trigger: CTGGGTTTCGTGAACAAGCAACAGGCCCACGACCTG...CAGAGCAGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS GCA 90 bp | CGGGCGTCGAGACTGTCCATGGGCCGGCGTAAAAGTTCTTCCACGTaGCTGGCAACATCCATGCTCTCATCCAGGTCAAACTCGCCATCT | + |
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Preference number: 5 (lower is better) Translates to: RASRLSMGRRKSSST*LATSMLSSRSNSPS Trigger: AGATGGCGAGTTTGACCTGGATGAGAGCATGGATGTTGCCAGGCACGTGGAAGAACTTTTACGCCGGCCCATGGACAGTCTCGACGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | CTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTTCGTGGGCCTGTTGCTaGTTCACGAAACCCAGGATA | + |
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Preference number: 5 (lower is better) Translates to: LLPSERLEARTPSRLLLASWACC*FTKPRI Trigger: TATCCTGGGTTTCGTGAACAAGCAACAGGCCCACGA...AGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | AGGGATGGTGGGAACGTGGACAAGGCCGTTAGACTTGAATCTCACGTCCATCCAAAGGTCCCGTCCGGCTaGTTGATGAGCAGGTCGTGG | + |
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Preference number: 5 (lower is better) Translates to: RDGGNVDKAVRLESHVHPKVPSG*LMSRSW Trigger: CCACGACCTGCTCATCAACAAGCCGGACGGGACCTT...TGGATGGACGTGAGATTCAAGTCTAACGGCCTTGTCCACGTTCCCACCATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | CTGCTTCCTTCAGAGAGGTTGGAAGCCAGGACTCCTAGTCGGCTCCTCCTGGCTGCATCTGTGGATGCATaGACGAACTCAGGGACCACT | + |
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Preference number: 5 (lower is better) Translates to: LLPSERLEARTPSRLLLAASVDA*TNSGTT Trigger: AGTGGTCCCTGAGTTCGTCAATGCATCCACAGATGC...AGCCAGGAGGAGCCGACTAGGAGTCCTGGCTTCCAACCTCTCTGAAGGAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 |
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| CDS GCA 90 bp | CCATGGGCCGGCGTAAAAGTTCTTCCACGTGCCTGGCAACATCCATaGTCTCATCCAGGTCAAACTCGCCATCTTGGTCAAGGACAGGGT | + |
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Preference number: 5 (lower is better) Translates to: PWAGVKVLPRAWQHP*SHPGQTRHLGQGQG Trigger: ACCCTGTCCTTGACCAAGATGGCGAGTTTGACCTGGATGAGAGCATGGATGTTGCCAGGCACGTGGAAGAACTTTTACGCCGGCCCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS CCA 90 bp | CGTCGAGACTGTCCATGGGCCGGCGTAAAAGTTCTTCCACGTGCCTaGCAACATCCATGCTCTCATCCAGGTCAAACTCGCCATCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: RRDCPWAGVKVLPRA*QHPCSHPGQTRHLG Trigger: ACCAAGATGGCGAGTTTGACCTGGATGAGAGCATGGATGTTGCCAGGCACGTGGAAGAACTTTTACGCCGGCCCATGGACAGTCTCGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | GGCTGCTCTGTCACAGCCTCCAGGGAAGAGCTGCTGAAGCGATTTCTGAGACCATCGTGGGCCTGTTGCTaGTTCACGAAACCCAGGATA | + |
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Preference number: 5 (lower is better) Translates to: GCSVTASREELLKRFLRPSWACC*FTKPRI Trigger: TATCCTGGGTTTCGTGAACAAGCAACAGGCCCACGA...TGGTCTCAGAAATCGCTTCAGCAGCTCTTCCCTGGAGGCTGTGACAGAGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | GAGCAATCACAAAGTCTGCAGCCCGTATGTATACACAAAGGTATAAAGGGTCACCAGGCCCTCCAGGAGTaGGGTGGCCTGACCTCGGTC | + |
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Preference number: 5 (lower is better) Translates to: EQSQSLQPVCIHKGIKGHQALQE*GGLTSV Trigger: GACCGAGGTCAGGCCACCCAACTCCTGGAGGGCCTG...GTGACCCTTTATACCTTTGTGTATACATACGGGCTGCAGACTTTGTGATTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | TGGGGGCCCTTGAGGTCTGAACAAAAAGGTCACCACCGCTTTAGCCACAAACCCGCATCTGTGGATGCATaGACGAACTCAGGGACCACT | + |
|
Preference number: 5 (lower is better) Translates to: WGPLRSEQKGHHRFSHKPASVDA*TNSGTT Trigger: AGTGGTCCCTGAGTTCGTCAATGCATCCACAGATGC...GGGTTTGTGGCTAAAGCGGTGGTGACCTTTTTGTTCAGACCTCAAGGGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 |
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| CDS-3UTR CAA 90 bp | TTCACTGAAATGGCCATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGTCCCGTCCGGCTTGTaGATGAGCAGGTCGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: FTEMAIGQKKDTGEIGLSVPSGL*MSRSWA Trigger: GGCCCACGACCTGCTCATCAACAAGCCGGACGGGAC...TGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAATGGCCATTTCAGTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | GGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGTTCAGCTGGCTCAGCAAAGGCATaGTCCCACAGCACGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GQKKDTGEIGLSAMIGSAGSAKA*SHSTVA Trigger: TGCCACCGTGCTGTGGGACAATGCCTTTGCTGAGCC...AGCTGAACCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | GGCCATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGCAGGTCGTGGGCCTGTaGCTTGTTCACGAAACCCAG | + |
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Preference number: 5 (lower is better) Translates to: GHWTEKGHRRNRFVSNDRQVVGL*LVHETQ Trigger: CTGGGTTTCGTGAACAAGCAACAGGCCCACGACCTG...CCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAATGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | TTCACTGAAATGGCCATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGGCTCAGCAAAGGCATaGTCCCACAGCACGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FTEMAIGQKKDTGEIGLSGSAKA*SHSTVA Trigger: TGCCACCGTGCTGTGGGACAATGCCTTTGCTGAGCC...TGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAATGGCCATTTCAGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | GGCCATTGGACAGAAAAAGGACACCGGAGAAATAGGTTTGTCAGCAATGATAGGTCGTGGGCCTGTTGCTaGTTCACGAAACCCAGGATA | + |
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Preference number: 5 (lower is better) Translates to: GHWTEKGHRRNRFVSNDRSWACC*FTKPRI Trigger: TATCCTGGGTTTCGTGAACAAGCAACAGGCCCACGA...CCTATCATTGCTGACAAACCTATTTCTCCGGTGTCCTTTTTCTGTCCAATGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS-3UTR CAA 90 bp | AATGTTGAGTTCTATGTACAAAATATAAAAAGCATCCCTCTGCTTCCTTCAGAGAAGGTCCCGTCCGGCTaGTTGATGAGCAGGTCGTGG | + |
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Preference number: 5 (lower is better) Translates to: NVEFYVQNIKSIPLLPSEKVPSG*LMSRSW Trigger: CCACGACCTGCTCATCAACAAGCCGGACGGGACCTT...CTCTGAAGGAAGCAGAGGGATGCTTTTTATATTTTGTACATAGAACTCAACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS CCA 72 bp | CAGCAGGTGGGGAGAGGCGGGCGTCGAGACTGTCCATaGGCCGGCGTAAAAGTTCTTCCACGTGCCTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QQVGRGGRRDCP*AGVKVLPRAWQ Trigger: TTGCCAGGCACGTGGAAGAACTTTTACGCCGGCCCATGGACAGTCTCGACGCCCGCCTCTCCCCACCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS CAA 72 bp | CCGGACCTCGATGGGGAAATGCTGCCCATACAACACTaGCATCTGGCGCAGGGCATCTCCCTGAAGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PDLDGEMLPIQH*HLAQGISLKLL Trigger: CAGCAGCTTCAGGGAGATGCCCTGCGCCAGATGCAAGTGTTGTATGGGCAGCATTTCCCCATCGAGGTCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 ENSMUST00000133036.8 ENSMUST00000138083.8 |
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| CDS CAA 72 bp | ACAGCAAATGGCACCCTGCCCGGCTCAGCAAAGGCATaGTCCCACAGCACGGTGGCAGTAGCATTGTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TANGTLPGSAKA*SHSTVAVALWS Trigger: GGACCACAATGCTACTGCCACCGTGCTGTGGGACAATGCCTTTGCTGAGCCGGGCAGGGTGCCATTTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS CAA 90 bp | CAGGTAGTGCCGGACCTCGATGGGGAAATGCTGCCCATACAACACTaGCATCTGGCGCAGGGCATCTCCCTGAAGCTGCTGGGCCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QVVPDLDGEMLPIQH*HLAQGISLKLLGLN Trigger: ATTCAGGCCCAGCAGCTTCAGGGAGATGCCCTGCGCCAGATGCAAGTGTTGTATGGGCAGCATTTCCCCATCGAGGTCCGGCACTACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 ENSMUST00000133036.8 ENSMUST00000138083.8 |
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| CDS CCA 72 bp | TCTCGATCCACTGGGCCAGGTAGTGCCGGACCTCGATaGGGAAATGCTGCCCATACAACACTTGCATCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SRSTGPGSAGPR*GNAAHTTLASG Trigger: GCCAGATGCAAGTGTTGTATGGGCAGCATTTCCCCATCGAGGTCCGGCACTACCTGGCCCAGTGGATCGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 ENSMUST00000133036.8 ENSMUST00000138083.8 |
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| CDS GCA 72 bp | CCGTCCGGCTTGTTGATGAGCAGGTCGTGGGCCTGTTaGTTGTTCACGAAACCCAGGATAGCCCCATCATTC | + |
|
Preference number: 6 (lower is better) Translates to: PSGLLMSRSWAC*LFTKPRIAPSF Trigger: GAATGATGGGGCTATCCTGGGTTTCGTGAACAAGCAACAGGCCCACGACCTGCTCATCAACAAGCCGGACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS CCA 72 bp | TGTCCATGGGCCGGCGTAAAAGTTCTTCCACGTGCCTaGCAACATCCATGCTCTCATCCAGGTCAAACTCGC | + |
|
Preference number: 6 (lower is better) Translates to: CPWAGVKVLPRA*QHPCSHPGQTR Trigger: GCGAGTTTGACCTGGATGAGAGCATGGATGTTGCCAGGCACGTGGAAGAACTTTTACGCCGGCCCATGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS CAA 90 bp | GTGCCTGGCAACATCCATGCTCTCATCCAGGTCAAACTCGCCATCTaGGTCAAGGACAGGGTCAGGGTTGGGTGGGTACATGTTGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VPGNIHALIQVKLAI*VKDRVRVGWVHVVV Trigger: CACTACAACATGTACCCACCCAACCCTGACCCTGTCCTTGACCAAGATGGCGAGTTTGACCTGGATGAGAGCATGGATGTTGCCAGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS TCA 72 bp | ACCTGGAACACCAGCTCGTTGCTGCCAACGCTGAACTaGGACTCAAACAGGACTGTGAACTTCTCCTCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: TWNTSSLLPTLN*DSNRTVNFSSV Trigger: GACGGAGGAGAAGTTCACAGTCCTGTTTGAGTCTCAGTTCAGCGTTGGCAGCAACGAGCTGGTGTTCCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS GCA 72 bp | AGACTGTCCATGGGCCGGCGTAAAAGTTCTTCCACGTaGCTGGCAACATCCATGCTCTCATCCAGGTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: RLSMGRRKSSST*LATSMLSSRSN Trigger: GTTTGACCTGGATGAGAGCATGGATGTTGCCAGGCACGTGGAAGAACTTTTACGCCGGCCCATGGACAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS CCA 72 bp | ACATCCATGCTCTCATCCAGGTCAAACTCGCCATCTTaGTCAAGGACAGGGTCAGGGTTGGGTGGGTACATG | + |
|
Preference number: 6 (lower is better) Translates to: TSMLSSRSNSPS*SRTGSGLGGYM Trigger: CATGTACCCACCCAACCCTGACCCTGTCCTTGACCAAGATGGCGAGTTTGACCTGGATGAGAGCATGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS CAA 72 bp | AACATCCATGCTCTCATCCAGGTCAAACTCGCCATCTaGGTCAAGGACAGGGTCAGGGTTGGGTGGGTACAT | + |
|
Preference number: 6 (lower is better) Translates to: NIHALIQVKLAI*VKDRVRVGWVH Trigger: ATGTACCCACCCAACCCTGACCCTGTCCTTGACCAAGATGGCGAGTTTGACCTGGATGAGAGCATGGATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS GCA 72 bp | GGCGTAAAAGTTCTTCCACGTGCCTGGCAACATCCATaGTCTCATCCAGGTCAAACTCGCCATCTTGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: GVKVLPRAWQHP*SHPGQTRHLGQ Trigger: TTGACCAAGATGGCGAGTTTGACCTGGATGAGAGCATGGATGTTGCCAGGCACGTGGAAGAACTTTTACGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004145.14 ENSMUST00000107356.8 ENSMUST00000107357.4 |
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| CDS CCA 72 bp | GATGCATTGACGAACCAAGTACAGGAGTGTAATACTTaGCAAAGACCTCGTCCTTGGGTCGGTCTGGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: DALTNQVQECNT*QRPRPWVGLGT Trigger: TGTTCCCAGACCGACCCAAGGACGAGGTCTTTGCCAAGTATTACACTCCTGTACTTGGTTCGTCAATGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107357.4 |
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