Pregenerated sensors for STAT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062939Ensembl transcript IDs: ENSMUST00000027277.7, ENSMUST00000168302.8
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCATTTTCTAGAAACTGGTATTTACAAAGCCGAAGAAATAAATTGTaGTCTATGGTAAAGAACACTCTCCAGTTTCATCTGCTTCCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: PFSRNWYLQSRRNKL*SMVKNTLQFHLLPS Trigger: AGAAGGAAGCAGATGAAACTGGAGAGTGTTCTTTACCATAGATCACAATTTATTTCTTCGGCTTTGTAAATACCAGTTTCTAGAAAATGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTAGTCACAGCGCTCCTTaGTGGGAGTGGCACCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: GVLCYIVTNTGFLKLSFLSHSAP*WEWHQV Trigger: CACTTGGTGCCACTCCCAGCAAGGAGCGCTGTGACT...AAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCGGGAGTGGCACCAAGTaGGAAGAGAGCTTCCAACTT | + |
|
Preference number: 2 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCGSGTK*EESFQL Trigger: AAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCC...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| 3UTR TCA 72 bp | AGAAACTGGTATTTACAAAGCCGAAGAAATAAATTGTaGTCTATGGTAAAGAACACTCTCCAGTTTCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: RNWYLQSRRNKL*SMVKNTLQFHL Trigger: CAGATGAAACTGGAGAGTGTTCTTTACCATAGATCACAATTTATTTCTTCGGCTTTGTAAATACCAGTTTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | AGTCACAGCGCTCCTTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCTTTCCAGGAGGTGTaGTCTTTGAGCAGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSAPCWEWHQVRRELPTSFQEV*SLSRDG Trigger: CCCATCCCTGCTCAAAGAGCACACCTCCTGGAAAGA...AGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAAGGAGCGCTGTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGTCACAGCGCTCCTTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTATTGGTCCACCCAGGTaGAGGTTATCCCTCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SHSAPCWEWHQVRRELPTIGPPR*RLSLQD Trigger: ATCTTGGAGGGATAACCTTCACCTGGGTGGACCAAT...AGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAAGGAGCGCTGTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACAGCGCTCCTTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTCTCTTTGAGCAGGGATaGGATCCCCTTCATAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHSAPCWEWHQVRRELPTLFEQG*DPLHRS Trigger: TGACCTATGAAGGGGATCCCATCCCTGCTCAAAGAG...AGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAAGGAGCGCTGTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGGAGGTGTGCTCTTTaGGCAGGGATGGGATCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGVAPSEKRASNFLPFSRRCAL*AGMGSP Trigger: AGGGGATCCCATCCCTGCTCAAAGAGCACACCTCCT...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGTACCATCGGCCTCTaGGGGTGCGTTGGCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGVAPSEKRASNFLPFSSTIGL*GCVGMH Trigger: ATGCATGCCAACGCACCCTCAGAGGCCGATGGTACT...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGTCACAGCGCTCCTTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTATGTCTAAACTCCACTaGGAGGCTCCCATTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHSAPCWEWHQVRRELPTMSKLH*EAPIGR Trigger: TCTTCCAATGGGAGCCTCTCAGTGGAGTTTAGACAT...AGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAAGGAGCGCTGTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGGGTAAAGCAGTTCTaGAGCTGGTCCAGCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVAPSEKRASNFLPFSRVKQF*SWSSPL Trigger: CAATGGGCTGGACCAGCTTCAGAACTGCTTTACCCT...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTCCAATGCAGGCAATCTaGTGCCGCTTTTTCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGVAPSEKRASNFLPFSPMQAI*CRFFQS Trigger: GGACTGGAAAAAGCGGCAGCAGATTGCCTGCATTGG...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACAGCGCTCCTTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTGTTATCCCTCCAAGATaGCTCTCACTGAATCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SHSAPCWEWHQVRRELPTVIPPR*LSLNLN Trigger: GTTAAGATTCAGTGAGAGCCATCTTGGAGGGATAAC...AGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAAGGAGCGCTGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTGAAGCATGCTGTTCATaGGCAGGTCTGTCTCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGVAPSEKRASNFLPFSEACCS*AGLSRS Trigger: TGAACGAGACAGACCTGCTCATGAACAGCATGCTTC...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGTCACAGCGCTCCTTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTCTGGGAGTCGTTAGTTaGTACATTGTACCAAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SHSAPCWEWHQVRRELPTLGVVS*YIVPND Trigger: ATCATTTGGTACAATGTATCAACTAACGACTCCCAG...AGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAAGGAGCGCTGTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAACTTGGCCCAGGTaGGGTGACCATCATTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGVAPSEKRASNFLPFSRTWPR*GDHHCS Trigger: ACTACAATGATGGTCACCTCACCTGGGCCAAGTTCT...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGTCACAGCGCTCCTTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTCAAGATGGCTCTCACTaGATCTTAACAAAAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHSAPCWEWHQVRRELPTQDGSH*ILTKMS Trigger: GGACATTTTTGTTAAGATTCAGTGAGAGCCATCTTG...AGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAAGGAGCGCTGTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGTCACAGCGCTCCTTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTATCGCTTCGGATTGTTaGAATGGGGATAAAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHSAPCWEWHQVRRELPTIASDC*NGDKNR Trigger: TCTGTTTTTATCCCCATTTCAACAATCCGAAGCGAT...AGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAAGGAGCGCTGTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTCATGGGGAGAAGGTCTaGAGGAGATTGTGGCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: WHQVRRELPTSYHFLETGHGEKV*RRLWLR Trigger: ACGGAGCCACAATCTCCTTCAGACCTTCTCCCCATG...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGACTCTTTGAGCAGGGATaGGATCCCCTTCATAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGVAPSEKRASNFLPFSRLFEQG*DPLHRS Trigger: TGACCTATGAAGGGGATCCCATCCCTGCTCAAAGAG...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTGTGCGTTGGCATGCATaGCTGTCGCTCGACCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: WHQVRRELPTSYHFLETGVRWHA*LSLDHK Trigger: TTTGTGGTCGAGCGACAGCCATGCATGCCAACGCAC...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGACTGAGAGGCTCCCATTaGAAGATTCCTCACTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGVAPSEKRASNFLPFSRLRGSH*KIPHWT Trigger: TGTCCAGTGAGGAATCTTCCAATGGGAGCCTCTCAG...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGATCCTCTGTCACCATGTaGCAGCCCTCGTTTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LGVAPSEKRASNFLPFSRSSVTM*QPSFPL Trigger: TAAAGGAAACGAGGGCTGCCACATGGTGACAGAGGA...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTTCTTTCCAGGAGGTGTaGTCTTTGAGCAGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: WHQVRRELPTSYHFLETGSFQEV*SLSRDG Trigger: CCCATCCCTGCTCAAAGAGCACACCTCCTGGAAAGA...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTGGGAGCTGTAGTGTTTaGCAAAGGCTTTGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGVAPSEKRASNFLPFSGSCSV*QRLCLW Trigger: CCAAAGACAAAGCCTTTGGCAAACACTACAGCTCCC...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGACAGGCATTTTATCTTTaGGCAGAAGCCGTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGVAPSEKRASNFLPFSRQAFYL*AEAVPS Trigger: AGAAGGAACGGCTTCTGCTCAAAGATAAAATGCCTG...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTAACTGTGAGCTTCTCTaGCAGCATGTTGAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WHQVRRELPTSYHFLETGNCELL*QHVELL Trigger: GAGCAGCTCAACATGCTGGCAGAGAAGCTCACAGTT...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTTCTCAGCACAGCATATaGACTTGGAGACATGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WHQVRRELPTSYHFLETGSQHSI*TWRHGE Trigger: CTCCCCATGTCTCCAAGTGCATATGCTGTGCTGAGA...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTTCTCCATTTTCAGATTaGTCCACCCAGGTGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGVAPSEKRASNFLPFSSPFSD*STQVKV Trigger: AACCTTCACCTGGGTGGACCAATCTGAAAATGGAGA...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTTCTCCAGTTGCTGTCTaGGTTGGAAAAGACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WHQVRRELPTSYHFLETGSPVAV*VGKDSL Trigger: CAGAGAGTCTTTTCCAACTCAGACAGCAACTGGAGA...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTAGGAGGTGTGCTCTTTaGGCAGGGATGGGATCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSRRCAL*AGMGSP Trigger: AGGGGATCCCATCCCTGCTCAAAGAGCACACCTCCT...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCAGTACCATCGGCCTCTaGGGGTGCGTTGGCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCSTIGL*GCVGMH Trigger: ATGCATGCCAACGCACCCTCAGAGGCCGATGGTACT...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTGTTATCCCTCCAAGATaGCTCTCACTGAATCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGVAPSEKRASNFLPFSVIPPR*LSLNLN Trigger: GTTAAGATTCAGTGAGAGCCATCTTGGAGGGATAAC...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTCTGGGAGTCGTTAGTTaGTACATTGTACCAAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGVAPSEKRASNFLPFSLGVVS*YIVPND Trigger: ATCATTTGGTACAATGTATCAACTAACGACTCCCAG...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCCATGGGGAGAAGGTCTaGAGGAGATTGTGGCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCHGEKV*RRLWLR Trigger: ACGGAGCCACAATCTCCTTCAGACCTTCTCCCCATG...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGACTATTAAGCATTTCTTaGAGCGTCAAAACTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVAPSEKRASNFLPFSRLLSIS*SVKTSW Trigger: CCAGGAAGTTTTGACGCTGCAAGAAATGCTTAATAG...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGATGTAGTTTCTCCAGTTaGTGTCTGAGTTGGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGVAPSEKRASNFLPFSRCSFSS*CLSWKR Trigger: TCTTTTCCAACTCAGACAGCAACTGGAGAAACTACA...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTCTTTACTCCCAGTACTaGACTTCATCTCCTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WHQVRRELPTSYHFLETGLYSQY*TSSPWV Trigger: AACCCAAGGAGATGAAGTGCAGTACTGGGAGTAAAG...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTGTGCGTTGGCATGCATaGCTGTCGCTCGACCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSVRWHA*LSLDHK Trigger: TTTGTGGTCGAGCGACAGCCATGCATGCCAACGCAC...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTGCCCAAAGTGACAGATaGAGGGTTATTAAAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGVAPSEKRASNFLPFSAQSDR*RVIKEN Trigger: GTTTTCTTTAATAACCCTCCATCTGTCACTTTGGGC...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTTCTCCATTTTCAGATTaGTCCACCCAGGTGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WHQVRRELPTSYHFLETGSPFSD*STQVKV Trigger: AACCTTCACCTGGGTGGACCAATCTGAAAATGGAGA...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTAGGGTAAAGCAGTTCTaGAGCTGGTCCAGCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSRVKQF*SWSSPL Trigger: CAATGGGCTGGACCAGCTTCAGAACTGCTTTACCCT...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTTCGCTCGACCACAAATaGGTTCTTGAAAAGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WHQVRRELPTSYHFLETGSLDHK*VLEKVV Trigger: TACAACCTTTTCAAGAACTCATTTGTGGTCGAGCGA...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTGACATAGCTTTGACGTaGGTTCCACAAAGCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: WHQVRRELPTSYHFLETGDIALT*VPQSTN Trigger: ATTTGTGCTTTGTGGAACTCACGTCAAAGCTATGTC...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTCCAATGCAGGCAATCTaGTGCCGCTTTTTCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSPMQAI*CRFFQS Trigger: GGACTGGAAAAAGCGGCAGCAGATTGCCTGCATTGG...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAGTCATTTTAGTAGATTaGTCCTGTAGTTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGVAPSEKRASNFLPFSRVILVD*SCSFSS Trigger: ACTGGAGAAACTACAGGAGCAATCTACTAAAATGAC...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGACATGCATTAGGTAGTTaGCTGACATTAGAAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LGVAPSEKRASNFLPFSRHALGS*LTLEII Trigger: GATGATTTCTAATGTCAGCCAACTACCTAATGCATG...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAAGAAAACCAAGTTCTaGGAGTCGTTAGTTGATACA | + |
|
Preference number: 4 (lower is better) Translates to: LGVAPSEKRASNFLPFSRKKTKF*ESLVDT Trigger: TGTATCAACTAACGACTCCCAGAACTTGGTTTTCTT...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGATCATTCAGCAGAATATaGGGAATTCATTGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGVAPSEKRASNFLPFSRSFSRI*GIHCSF Trigger: GAAACTGCAATGAATTCCCCATATTCTGCTGAATGA...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTGAAGCATGCTGTTCATaGGCAGGTCTGTCTCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSEACCS*AGLSRS Trigger: TGAACGAGACAGACCTGCTCATGAACAGCATGCTTC...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTCCACAAATGAGTTCTTaGAAAGGTTGTAGATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WHQVRRELPTSYHFLETGPQMSS*KGCRSG Trigger: TCCTGATCTACAACCTTTTCAAGAACTCATTTGTGG...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTAGAACTTGGCCCAGGTaGGGTGACCATCATTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVLCYIVTNTGFLKLSFLRTWPR*GDHHCS Trigger: ACTACAATGATGGTCACCTCACCTGGGCCAAGTTCT...AAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTCAAGATGGCTCTCACTaGATCTTAACAAAAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WHQVRRELPTSYHFLETGQDGSH*ILTKMS Trigger: GGACATTTTTGTTAAGATTCAGTGAGAGCCATCTTG...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTATTGGTCCACCCAGGTaGAGGTTATCCCTCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVLCYIVTNTGFLKLSFLIGPPR*RLSLQD Trigger: ATCTTGGAGGGATAACCTTCACCTGGGTGGACCAAT...AAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTTCTCAGCACAGCATATaGACTTGGAGACATGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVLCYIVTNTGFLKLSFLSQHSI*TWRHGE Trigger: CTCCCCATGTCTCCAAGTGCATATGCTGTGCTGAGA...AAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTGGTCTTCTAAGTATTTaGTATCTTGTTCTGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGVAPSEKRASNFLPFSGLLSI*YLVLSS Trigger: AGATGACAGAACAAGATACCAAATACTTAGAAGACC...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCTCCTCTGTCACCATGTaGCAGCCCTCGTTTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCSSVTM*QPSFPL Trigger: TAAAGGAAACGAGGGCTGCCACATGGTGACAGAGGA...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTAGTTTTACAGTGAACTaGATGAGGGTTTTAAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: WHQVRRELPTSYHFLETGSFTVN*MRVLST Trigger: GGTACTTAAAACCCTCATTCAGTTCACTGTAAAACT...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTATGTCTAAACTCCACTaGGAGGCTCCCATTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSMSKLH*EAPIGR Trigger: TCTTCCAATGGGAGCCTCTCAGTGGAGTTTAGACAT...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCGGGAGCTGTAGTGTTTaGCAAAGGCTTTGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCGSCSV*QRLCLW Trigger: CCAAAGACAAAGCCTTTGGCAAACACTACAGCTCCC...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCATCACTTCCAGGAGTTaGCCCAAAGTGACAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCITSRS*PKVTDG Trigger: TCCATCTGTCACTTTGGGCCAACTCCTGGAAGTGAT...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTGTCTCGTTCACTATCTaGGTCATCTTACTGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSVSFTI*VILLSA Trigger: AGCACTCAGTAAGATGACGCAGATAGTGAACGAGAC...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCGGGTCTCAAAGGTTATaGAATGCAACTCCTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCGSQRL*NATPLS Trigger: TGACAGAGGAGTTGCATTCCATAACCTTTGAGACCC...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTGGGTCTCAAAGGTTATaGAATGCAACTCCTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSGSQRL*NATPLS Trigger: TGACAGAGGAGTTGCATTCCATAACCTTTGAGACCC...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCTCGCTCGACCACAAATaGGTTCTTGAAAAGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCSLDHK*VLEKVV Trigger: TACAACCTTTTCAAGAACTCATTTGTGGTCGAGCGA...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTCGTCATCTTACTGAGTaGTTCCTTTCTCTTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GVLCYIVTNTGFLKLSFLRHLTE*FLSLEV Trigger: GACTTCAAGAGAAAGGAAGCACTCAGTAAGATGACG...AAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCCGTCATCTTACTGAGTaGTTCCTTTCTCTTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCRHLTE*FLSLEV Trigger: GACTTCAAGAGAAAGGAAGCACTCAGTAAGATGACG...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCAGTTTCAATTGTCGTTaGGCTCAGGTTTTCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCSFNCR*AQVFSQ Trigger: CTGAGAGAAAACCTGAGCCCAACGACAATTGAAACT...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTAGTTTCAATTGTCGTTaGGCTCAGGTTTTCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVLCYIVTNTGFLKLSFLSFNCR*AQVFSQ Trigger: CTGAGAGAAAACCTGAGCCCAACGACAATTGAAACT...AAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCCCACAAATGAGTTCTTaGAAAGGTTGTAGATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCPQMSS*KGCRSG Trigger: TCCTGATCTACAACCTTTTCAAGAACTCATTTGTGG...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCATCGCTTCGGATTGTTaGAATGGGGATAAAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCIASDC*NGDKNR Trigger: TCTGTTTTTATCCCCATTTCAACAATCCGAAGCGAT...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCCTATTAAGCATTTCTTaGAGCGTCAAAACTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCLLSIS*SVKTSW Trigger: CCAGGAAGTTTTGACGCTGCAAGAAATGCTTAATAG...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCTGTAGTTTCTCCAGTTaGTGTCTGAGTTGGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCCSFSS*CLSWKR Trigger: TCTTTTCCAACTCAGACAGCAACTGGAGAAACTACA...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTGCCCAAAGTGACAGATaGAGGGTTATTAAAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSAQSDR*RVIKEN Trigger: GTTTTCTTTAATAACCCTCCATCTGTCACTTTGGGC...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTAGTTTTACAGTGAACTaGATGAGGGTTTTAAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSSFTVN*MRVLST Trigger: GGTACTTAAAACCCTCATTCAGTTCACTGTAAAACT...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCGTCATTTTAGTAGATTaGTCCTGTAGTTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCVILVD*SCSFSS Trigger: ACTGGAGAAACTACAGGAGCAATCTACTAAAATGAC...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTATATGGGGAATTCATTaGAGTTTCAATTGTCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSIWGIH*SFNCRW Trigger: CCAACGACAATTGAAACTGCAATGAATTCCCCATAT...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCAAGAAAACCAAGTTCTaGGAGTCGTTAGTTGATACA | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCKKTKF*ESLVDT Trigger: TGTATCAACTAACGACTCCCAGAACTTGGTTTTCTT...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCTCATTCAGCAGAATATaGGGAATTCATTGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCSFSRI*GIHCSF Trigger: GAAACTGCAATGAATTCCCCATATTCTGCTGAATGA...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS GCA 90 bp | AGCAGTTCTGAAGCTGGTCCAGCCCATTGTGGAGCGGGCCACCAATaGAGGCAATCTGCTGCCGCTTTTTCCAGTCCTGCAGCTCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SSSEAGPAHCGAGHQ*RQSAAAFSSPAALL Trigger: TAGAAGAGCTGCAGGACTGGAAAAAGCGGCAGCAGATTGCCTGCATTGGTGGCCCGCTCCACAATGGGCTGGACCAGCTTCAGAACTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGACAGGAGGTGTGCTCTTaGAGCAGGGATGGGATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGVAPSEKRASNFLPFSRQEVCS*SRDGIP Trigger: GGGGATCCCATCCCTGCTCAAAGAGCACACCTCCTG...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CCA 90 bp | TTGGGCTCAGGTTTTCTCTCAGCACAGCATATGCACTTGGAGACATaGGGAGAAGGTCTGAAGGAGATTGTGGCTCCGTGGAATCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGSGFLSAQHMHLET*GEGLKEIVAPWNRF Trigger: GAAGCGATTCCACGGAGCCACAATCTCCTTCAGACCTTCTCCCCATGTCTCCAAGTGCATATGCTGTGCTGAGAGAAAACCTGAGCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | AGTCACAGCGCTCCTTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTCCAGGCATTTTATCTTaGAGCAGAAGCCGTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHSAPCWEWHQVRRELPTPGILS*SRSRSF Trigger: GAAGGAACGGCTTCTGCTCAAAGATAAAATGCCTGG...AGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAAGGAGCGCTGTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS GCA 90 bp | GTTCGGTTGGTCTTGAGACTTCGCACGGCTGGGAGCTGTAGTGTTTaGCAAAGGCTTTGTCTTTGGGAATGTCAGGGTAGAGGTACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VRLVLRLRTAGSCSV*QRLCLWECQGRGTS Trigger: TGAAGTACCTCTACCCTGACATTCCCAAAGACAAAGCCTTTGGCAAACACTACAGCTCCCAGCCGTGCGAAGTCTCAAGACCAACCGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTCCAGGCAAATGTTCCTaGCAGAACTTGGCCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLGVAPSEKRASNFLPFSPGKCS*QNLAQV Trigger: CACCTGGGCCAAGTTCTGCAAGGAACATTTGCCTGG...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CCA 90 bp | ATCTGGGTCTCAAAGGTTATGGAATGCAACTCCTCTGTCACCATGTaGCAGCCCTCGTTTCCTTTACTCCCAGTACTGCACTTCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IWVSKVMECNSSVTM*QPSFPLLPVLHFIS Trigger: GGAGATGAAGTGCAGTACTGGGAGTAAAGGAAACGAGGGCTGCCACATGGTGACAGAGGAGTTGCATTCCATAACCTTTGAGACCCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGACCCTGGATAGGCATGTaGGCTGCAGCCAATATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGVAPSEKRASNFLPFSRPWIGM*AAANIL Trigger: GAGAATATTGGCTGCAGCCAACATGCCTATCCAGGG...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTCCCTGGATAGGCATGTaGGCTGCAGCCAATATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLGVAPSEKRASNFLPFSPWIGM*AAANIL Trigger: GAGAATATTGGCTGCAGCCAACATGCCTATCCAGGG...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTGCACAGCATATGCACTaGGAGACATGGGGAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLGVAPSEKRASNFLPFSAQHMH*ETWGEG Trigger: ACCTTCTCCCCATGTCTCCAAGTGCATATGCTGTGC...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS GCA 90 bp | CCCTCGTTTCCTTTACTCCCAGTACTGCACTTCATCTCCTTGGGTTaGAAATGTCTAAACTCCACTGAGAGGCTCCCATTGGAAGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSFPLLPVLHFISLG*KCLNSTERLPLEDS Trigger: GGAATCTTCCAATGGGAGCCTCTCAGTGGAGTTTAGACATTTGCAACCCAAGGAGATGAAGTGCAGTACTGGGAGTAAAGGAAACGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | AGTCACAGCGCTCCTTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTACTATTAAGCATTTCTaGCAGCGTCAAAACTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SHSAPCWEWHQVRRELPTTIKHF*QRQNFL Trigger: CAGGAAGTTTTGACGCTGCAAGAAATGCTTAATAGT...AGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAAGGAGCGCTGTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTCAGTTGCTGTCTGAGTaGGAAAAGACTCTCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLGVAPSEKRASNFLPFSQLLSE*EKTLCQ Trigger: CTGGCAGAGAGTCTTTTCCAACTCAGACAGCAACTG...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGACAGTTGCTGTCTGAGTaGGAAAAGACTCTCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGVAPSEKRASNFLPFSRQLLSE*EKTLCQ Trigger: CTGGCAGAGAGTCTTTTCCAACTCAGACAGCAACTG...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | AGTCACAGCGCTCCTTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTAGAGTTGAAACATTCTaGTCAATGGACGCCTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: SHSAPCWEWHQVRRELPTRVETF*SMDAFT Trigger: AGTAAAGGCGTCCATTGACAAGAATGTTTCAACTCT...AGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAAGGAGCGCTGTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTCATCACTTCCAGGAGTaGGCCCAAAGTGACAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: WHQVRRELPTSYHFLETGHHFQE*AQSDRW Trigger: CCATCTGTCACTTTGGGCCAACTCCTGGAAGTGATG...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS TCA 90 bp | AGTACTGCACTTCATCTCCTTGGGTTGCAAATGTCTAAACTCCACTaGGAGGCTCCCATTGGAAGATTCCTCACTGGACATAGCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: STALHLLGLQMSKLH*EAPIGRFLTGHSFD Trigger: GTCAAAGCTATGTCCAGTGAGGAATCTTCCAATGGGAGCCTCTCAGTGGAGTTTAGACATTTGCAACCCAAGGAGATGAAGTGCAGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGACCACAGCTACATGCATaGGATTTCCATGAAACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGVAPSEKRASNFLPFSRPQLHA*DFHETC Trigger: GCAAGTTTCATGGAAATCCAATGCATGTAGCTGTGG...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTCAGGAGGTGTGCTCTTaGAGCAGGGATGGGATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSQEVCS*SRDGIP Trigger: GGGGATCCCATCCCTGCTCAAAGAGCACACCTCCTG...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGACTTCATCTCCTTGGGTaGCAAATGTCTAAACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGVAPSEKRASNFLPFSRLHLLG*QMSKLH Trigger: GTGGAGTTTAGACATTTGCAACCCAAGGAGATGAAG...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGACAGTTTCAATTGTCGTaGGGCTCAGGTTTTCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGVAPSEKRASNFLPFSRQFQLS*GSGFLS Trigger: TGAGAGAAAACCTGAGCCCAACGACAATTGAAACTG...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTCAGTTTCAATTGTCGTaGGGCTCAGGTTTTCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGVAPSEKRASNFLPFSQFQLS*GSGFLS Trigger: TGAGAGAAAACCTGAGCCCAACGACAATTGAAACTG...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS GCA 90 bp | TCTAGAAGCATGCTGTTCATGAGCAGGTCTGTCTCGTTCACTATCTaGGTCATCTTACTGAGTGCTTCCTTTCTCTTGAAGTCCAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: SRSMLFMSRSVSFTI*VILLSASFLLKSRL Trigger: TAGTCTGGACTTCAAGAGAAAGGAAGCACTCAGTAAGATGACGCAGATAGTGAACGAGACAGACCTGCTCATGAACAGCATGCTTCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTCAGAAGGTAAATGTTTaGCCAGGCAAATGTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLGVAPSEKRASNFLPFSQKVNV*PGKCSL Trigger: CAAGGAACATTTGCCTGGCAAAACATTTACCTTCTG...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTTGTTTGCCAAAGGCTTaGTCTTTGGGAATGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WHQVRRELPTSYHFLETGCLPKA*SLGMSG Trigger: CCCTGACATTCCCAAAGACAAAGCCTTTGGCAAACA...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGATCATTGCAGTTTCAATaGTCGTTGGGCTCAGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGVAPSEKRASNFLPFSRSLQFQ*SLGSGF Trigger: AAAACCTGAGCCCAACGACAATTGAAACTGCAATGA...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS GCA 90 bp | CATGAGCAGGTCTGTCTCGTTCACTATCTGCGTCATCTTACTGAGTaGTTCCTTTCTCTTGAAGTCCAGACTATTAAGCATTTCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HEQVCLVHYLRHLTE*FLSLEVQTIKHFLQ Trigger: CTGCAAGAAATGCTTAATAGTCTGGACTTCAAGAGAAAGGAAGCACTCAGTAAGATGACGCAGATAGTGAACGAGACAGACCTGCTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTCCACAGCTACATGCATaGGATTTCCATGAAACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: WHQVRRELPTSYHFLETGPQLHA*DFHETC Trigger: GCAAGTTTCATGGAAATCCAATGCATGTAGCTGTGG...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGATTAATGGCAGACACTTaGTGTTCCACATTCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LGVAPSEKRASNFLPFSRLMADT*CSTFLC Trigger: ACAAAGGAATGTGGAACACAAAGTGTCTGCCATTAA...TCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGGAGTGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTTGTCACCCTGATCCATaGTCTGAATTGTTTTATACC | + |
|
Preference number: 5 (lower is better) Translates to: LLGVAPSEKRASNFLPFSCHPDP*SELFYT Trigger: GGTATAAAACAATTCAGACAATGGATCAGGGTGACA...AGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCACTCCCAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTCCAGGCAAATGTTCCTaGCAGAACTTGGCCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GVLCYIVTNTGFLKLSFLPGKCS*QNLAQV Trigger: CACCTGGGCCAAGTTCTGCAAGGAACATTTGCCTGG...AAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS TCA 90 bp | GAGAGGCTCCCATTGGAAGATTCCTCACTGGACATAGCTTTGACGTaGGTTCCACAAAGCACAAATCTTCTATTGCTTAGAGTTGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: ERLPLEDSSLDIALT*VPQSTNLLLLRVET Trigger: TGTTTCAACTCTAAGCAATAGAAGATTTGTGCTTTGTGGAACTCACGTCAAAGCTATGTCCAGTGAGGAATCTTCCAATGGGAGCCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CCA 90 bp | TCATTCAGCAGAATATGGGGAATTCATTGCAGTTTCAATTGTCGTTaGGCTCAGGTTTTCTCTCAGCACAGCATATGCACTTGGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: SFSRIWGIHCSFNCR*AQVFSQHSICTWRH Trigger: ATGTCTCCAAGTGCATATGCTGTGCTGAGAGAAAACCTGAGCCCAACGACAATTGAAACTGCAATGAATTCCCCATATTCTGCTGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTCAGAAGGTAAATGTTTaGCCAGGCAAATGTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WHQVRRELPTSYHFLETGQKVNV*PGKCSL Trigger: CAAGGAACATTTGCCTGGCAAAACATTTACCTTCTG...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCACAGCATATGCACTaGGAGACATGGGGAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GVLCYIVTNTGFLKLSFLAQHMH*ETWGEG Trigger: ACCTTCTCCCCATGTCTCCAAGTGCATATGCTGTGC...AAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS GCA 90 bp | CTGAGTGCTTCCTTTCTCTTGAAGTCCAGACTATTAAGCATTTCTTaGAGCGTCAAAACTTCCTGGTTCACCAGGATACTGTTTTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSASFLLKSRLLSIS*SVKTSWFTRILFLS Trigger: TGACAAAAACAGTATCCTGGTGAACCAGGAAGTTTTGACGCTGCAAGAAATGCTTAATAGTCTGGACTTCAAGAGAAAGGAAGCACTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CCA 90 bp | GTTGATACATTGTACCAAATGATGGATGCCCATGCATTAGGTAGTTaGCTGACATTAGAAATCATCACGACAGGTAATGAGCTGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VDTLYQMMDAHALGS*LTLEIITTGNELVS Trigger: AGAGACCAGCTCATTACCTGTCGTGATGATTTCTAATGTCAGCCAACTACCTAATGCATGGGCATCCATCATTTGGTACAATGTATCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCAGCTACTTCCCAGTCTaGAGTCTCAATCCACTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCSYFPV*SLNPLS Trigger: GCTCAGTGGATTGAGACTCAAGACTGGGAAGTAGCT...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTAGCTACTTCCCAGTCTaGAGTCTCAATCCACTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVLCYIVTNTGFLKLSFLSYFPV*SLNPLS Trigger: GCTCAGTGGATTGAGACTCAAGACTGGGAAGTAGCT...AAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTTGTCACCCTGATCCATaGTCTGAATTGTTTTATACC | + |
|
Preference number: 5 (lower is better) Translates to: WHQVRRELPTSYHFLETGCHPDP*SELFYT Trigger: GGTATAAAACAATTCAGACAATGGATCAGGGTGACA...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | TGGCACCAAGTGAGAAGAGAGCTTCCAACTTCCTACCATTTTCTAGAAACTGGTTCGTTAGTTGATACATaGTACCAAATGATGGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: WHQVRRELPTSYHFLETGSLVDT*YQMMDA Trigger: GGCATCCATCATTTGGTACAATGTATCAACTAACGA...ACCAGTTTCTAGAAAATGGTAGGAAGTTGGAAGCTCTCTTCTCACTTGGTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTTTCTCTGCCAGCATGTaGAGCTGCTCTGAATTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVLCYIVTNTGFLKLSFLFSASM*SCSELR Trigger: CCTTAATTCAGAGCAGCTCAACATGCTGGCAGAGAA...AAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTTCTCTGCCAGCATGTaGAGCTGCTCTGAATTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSFSASM*SCSELR Trigger: CCTTAATTCAGAGCAGCTCAACATGCTGGCAGAGAA...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTCCAGGCATTTTATCTTaGAGCAGAAGCCGTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSPGILS*SRSRSF Trigger: GAAGGAACGGCTTCTGCTCAAAGATAAAATGCCTGG...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCTGTTTGCCAAAGGCTTaGTCTTTGGGAATGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCCLPKA*SLGMSG Trigger: CCCTGACATTCCCAAAGACAAAGCCTTTGGCAAACA...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTCTTCATCTCCTTGGGTaGCAAATGTCTAAACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSLHLLG*QMSKLH Trigger: GTGGAGTTTAGACATTTGCAACCCAAGGAGATGAAG...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTCATTGCAGTTTCAATaGTCGTTGGGCTCAGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSSLQFQ*SLGSGF Trigger: AAAACCTGAGCCCAACGACAATTGAAACTGCAATGA...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS TCA 90 bp | TTGGAAACACGCCCCAACTGTTCATCCAATTGTATTAGTAAGTTTTaGAGCAGAATTGTTGCCATAGTTTCATTGTTAGAAGCTACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LETRPNCSSNCISKF*SRIVAIVSLLEATS Trigger: GGAAGTAGCTTCTAACAATGAAACTATGGCAACAATTCTGCTTCAAAACTTACTAATACAATTGGATGAACAGTTGGGGCGTGTTTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCTTAATGGCAGACACTTaGTGTTCCACATTCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCLMADT*CSTFLC Trigger: ACAAAGGAATGTGGAACACAAAGTGTCTGCCATTAA...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTACTATTAAGCATTTCTaGCAGCGTCAAAACTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSPLLYCYQHWFLKAVFSTIKHF*QRQNFL Trigger: CAGGAAGTTTTGACGCTGCAAGAAATGCTTAATAGT...AGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTGCAGAGTTGAAACATTCTaGTCAATGGACGCCTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: SPLLYCYQHWFLKAVFSCRVETF*SMDAFT Trigger: AGTAAAGGCGTCCATTGACAAGAATGTTTCAACTCT...GCAAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTTCGTTAGTTGATACATaGTACCAAATGATGGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: GVLCYIVTNTGFLKLSFLSLVDT*YQMMDA Trigger: GGCATCCATCATTTGGTACAATGTATCAACTAACGA...AAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTCTTCCCTTAAGCAATTaGAAATTACCACAGCTACAT | + |
|
Preference number: 5 (lower is better) Translates to: GVLCYIVTNTGFLKLSFLLPLSN*KLPQLH Trigger: ATGTAGCTGTGGTAATTTCAAATTGCTTAAGGGAAG...AAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTCCTCTGTTATATTGTTACCAACACTGGTTTCTTAAAGCTGTCTTTTCTTAATATGGGGAATTCATaGCAGTTTCAATTGTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVLCYIVTNTGFLKLSFLNMGNS*QFQLSL Trigger: CAACGACAATTGAAACTGCAATGAATTCCCCATATT...AAGAAAAGACAGCTTTAAGAAACCAGTGTTGGTAACAATATAACAGAGGACTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS TCA 72 bp | GGGGACGTAACCCTTGTCTCCCCGTTCGGTTGGTCTTaGGACTTCGCACGGCTGGGAGCTGTAGTGTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GDVTLVSPFGWS*DFARLGAVVFA Trigger: GGCAAACACTACAGCTCCCAGCCGTGCGAAGTCTCAAGACCAACCGAACGGGGAGACAAGGGTTACGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS GCA 72 bp | GAAGCTGGTCCAGCCCATTGTGGAGCGGGCCACCAATaGAGGCAATCTGCTGCCGCTTTTTCCAGTCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: EAGPAHCGAGHQ*RQSAAAFSSPA Trigger: TGCAGGACTGGAAAAAGCGGCAGCAGATTGCCTGCATTGGTGGCCCGCTCCACAATGGGCTGGACCAGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 72 bp | AGGGGACGTAACCCTTGTCTCCCCGTTCGGTTGGTCTaGAGACTTCGCACGGCTGGGAGCTGTAGTGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RGRNPCLPVRLV*RLRTAGSCSVC Trigger: GCAAACACTACAGCTCCCAGCCGTGCGAAGTCTCAAGACCAACCGAACGGGGAGACAAGGGTTACGTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS GCA 72 bp | CCAATGCAGGCAATCTGCTGCCGCTTTTTCCAGTCCTaGAGCTCTTCTAGAAGCATGCTGTTCATGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PMQAICCRFFQS*SSSRSMLFMSR Trigger: CCTGCTCATGAACAGCATGCTTCTAGAAGAGCTGCAGGACTGGAAAAAGCGGCAGCAGATTGCCTGCATTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CCA 72 bp | GGTTTTCTCTCAGCACAGCATATGCACTTGGAGACATaGGGAGAAGGTCTGAAGGAGATTGTGGCTCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GFLSAQHMHLET*GEGLKEIVAPW Trigger: CCACGGAGCCACAATCTCCTTCAGACCTTCTCCCCATGTCTCCAAGTGCATATGCTGTGCTGAGAGAAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 90 bp | TGGCAGCCCTCGTTTCCTTTACTCCCAGTACTGCACTTCATCTCCTaGGGTTGCAAATGTCTAAACTCCACTGAGAGGCTCCCATTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WQPSFPLLPVLHFIS*GCKCLNSTERLPLE Trigger: TTCCAATGGGAGCCTCTCAGTGGAGTTTAGACATTTGCAACCCAAGGAGATGAAGTGCAGTACTGGGAGTAAAGGAAACGAGGGCTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS TCA 72 bp | TCCAGTCCTGCAGCTCTTCTAGAAGCATGCTGTTCATaGGCAGGTCTGTCTCGTTCACTATCTGCGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SSPAALLEACCS*AGLSRSLSASS Trigger: AGATGACGCAGATAGTGAACGAGACAGACCTGCTCATGAACAGCATGCTTCTAGAAGAGCTGCAGGACTGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CCA 72 bp | TCAAAGGTTATGGAATGCAACTCCTCTGTCACCATGTaGCAGCCCTCGTTTCCTTTACTCCCAGTACTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SKVMECNSSVTM*QPSFPLLPVLH Trigger: GTGCAGTACTGGGAGTAAAGGAAACGAGGGCTGCCACATGGTGACAGAGGAGTTGCATTCCATAACCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 72 bp | GATCAGGAAGGTAGCTCTTTCCAGGAGGTGTGCTCTTaGAGCAGGGATGGGATCCCCTTCATAGGTCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: DQEGSSFQEVCS*SRDGIPFIGHF Trigger: AAAATGACCTATGAAGGGGATCCCATCCCTGCTCAAAGAGCACACCTCCTGGAAAGAGCTACCTTCCTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS GCA 72 bp | CCTTTACTCCCAGTACTGCACTTCATCTCCTTGGGTTaGAAATGTCTAAACTCCACTGAGAGGCTCCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: PLLPVLHFISLG*KCLNSTERLPL Trigger: CAATGGGAGCCTCTCAGTGGAGTTTAGACATTTGCAACCCAAGGAGATGAAGTGCAGTACTGGGAGTAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 90 bp | AAGGTTGTAGATCAGGAAGGTAGCTCTTTCCAGGAGGTGTGCTCTTaGAGCAGGGATGGGATCCCCTTCATAGGTCATTTTAGTAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: KVVDQEGSSFQEVCS*SRDGIPFIGHFSRL Trigger: CAATCTACTAAAATGACCTATGAAGGGGATCCCATCCCTGCTCAAAGAGCACACCTCCTGGAAAGAGCTACCTTCCTGATCTACAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS TCA 72 bp | CTTCATCTCCTTGGGTTGCAAATGTCTAAACTCCACTaGGAGGCTCCCATTGGAAGATTCCTCACTGGACAT | + |
|
Preference number: 6 (lower is better) Translates to: LHLLGLQMSKLH*EAPIGRFLTGH Trigger: ATGTCCAGTGAGGAATCTTCCAATGGGAGCCTCTCAGTGGAGTTTAGACATTTGCAACCCAAGGAGATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS GCA 72 bp | GTCATTTTAGTAGATTGCTCCTGTAGTTTCTCCAGTTaGTGTCTGAGTTGGAAAAGACTCTCTGCCAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: VILVDCSCSFSS*CLSWKRLSASR Trigger: CCTACTGGCAGAGAGTCTTTTCCAACTCAGACAGCAACTGGAGAAACTACAGGAGCAATCTACTAAAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 72 bp | CAGAATATGGGGAATTCATTGCAGTTTCAATTGTCGTaGGGCTCAGGTTTTCTCTCAGCACAGCATATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: QNMGNSLQFQLS*GSGFLSAQHMH Trigger: GTGCATATGCTGTGCTGAGAGAAAACCTGAGCCCAACGACAATTGAAACTGCAATGAATTCCCCATATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS GCA 72 bp | TCCTTTCTCTTGAAGTCCAGACTATTAAGCATTTCTTaGAGCGTCAAAACTTCCTGGTTCACCAGGATACTG | + |
|
Preference number: 6 (lower is better) Translates to: SFLLKSRLLSIS*SVKTSWFTRIL Trigger: CAGTATCCTGGTGAACCAGGAAGTTTTGACGCTGCAAGAAATGCTTAATAGTCTGGACTTCAAGAGAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CCA 72 bp | AGAATATGGGGAATTCATTGCAGTTTCAATTGTCGTTaGGCTCAGGTTTTCTCTCAGCACAGCATATGCACT | + |
|
Preference number: 6 (lower is better) Translates to: RIWGIHCSFNCR*AQVFSQHSICT Trigger: AGTGCATATGCTGTGCTGAGAGAAAACCTGAGCCCAACGACAATTGAAACTGCAATGAATTCCCCATATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 72 bp | ACTATCTGCGTCATCTTACTGAGTGCTTCCTTTCTCTaGAAGTCCAGACTATTAAGCATTTCTTGCAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: TICVILLSASFL*KSRLLSISCSV Trigger: GACGCTGCAAGAAATGCTTAATAGTCTGGACTTCAAGAGAAAGGAAGCACTCAGTAAGATGACGCAGATAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 72 bp | ATTCAGCAGAATATGGGGAATTCATTGCAGTTTCAATaGTCGTTGGGCTCAGGTTTTCTCTCAGCACAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: IQQNMGNSLQFQ*SLGSGFLSAQH Trigger: ATGCTGTGCTGAGAGAAAACCTGAGCCCAACGACAATTGAAACTGCAATGAATTCCCCATATTCTGCTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 90 bp | ACTGAGTGCTTCCTTTCTCTTGAAGTCCAGACTATTAAGCATTTCTaGCAGCGTCAAAACTTCCTGGTTCACCAGGATACTGTTTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TECFLSLEVQTIKHF*QRQNFLVHQDTVFV Trigger: GACAAAAACAGTATCCTGGTGAACCAGGAAGTTTTGACGCTGCAAGAAATGCTTAATAGTCTGGACTTCAAGAGAAAGGAAGCACTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 72 bp | TTCCTTTCTCTTGAAGTCCAGACTATTAAGCATTTCTaGCAGCGTCAAAACTTCCTGGTTCACCAGGATACT | + |
|
Preference number: 6 (lower is better) Translates to: FLSLEVQTIKHF*QRQNFLVHQDT Trigger: AGTATCCTGGTGAACCAGGAAGTTTTGACGCTGCAAGAAATGCTTAATAGTCTGGACTTCAAGAGAAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 90 bp | GGTTCACCAGGATACTGTTTTTGTCACCCTGATCCATTGTCTGAATaGTTTTATACCTGTAGTCAAACTCATCTTGCAGGTCTTCTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSPGYCFCHPDPLSE*FYTCSQTHLAGLLS Trigger: ACTTAGAAGACCTGCAAGATGAGTTTGACTACAGGTATAAAACAATTCAGACAATGGATCAGGGTGACAAAAACAGTATCCTGGTGAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 90 bp | AAACTTCCTGGTTCACCAGGATACTGTTTTTGTCACCCTGATCCATaGTCTGAATTGTTTTATACCTGTAGTCAAACTCATCTTGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: KLPGSPGYCFCHPDP*SELFYTCSQTHLAG Trigger: ACCTGCAAGATGAGTTTGACTACAGGTATAAAACAATTCAGACAATGGATCAGGGTGACAAAAACAGTATCCTGGTGAACCAGGAAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 72 bp | AAGAAAACCAAGTTCTGGGAGTCGTTAGTTGATACATaGTACCAAATGATGGATGCCCATGCATTAGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: KKTKFWESLVDT*YQMMDAHALGS Trigger: ACTACCTAATGCATGGGCATCCATCATTTGGTACAATGTATCAACTAACGACTCCCAGAACTTGGTTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 90 bp | GTATCTTGTTCTGTCATCTGCACACTGTTTTTAATGGCAGACACTTaGTGTTCCACATTCCTTTGTCTTTCAGAAACTGAAGAACTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VSCSVICTLFLMADT*CSTFLCLSETEELC Trigger: ACAGAGTTCTTCAGTTTCTGAAAGACAAAGGAATGTGGAACACAAAGTGTCTGCCATTAAAAACAGTGTGCAGATGACAGAACAAGATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 72 bp | GGATACTGTTTTTGTCACCCTGATCCATTGTCTGAATaGTTTTATACCTGTAGTCAAACTCATCTTGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GYCFCHPDPLSE*FYTCSQTHLAG Trigger: ACCTGCAAGATGAGTTTGACTACAGGTATAAAACAATTCAGACAATGGATCAGGGTGACAAAAACAGTATCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS CAA 72 bp | GGTTCACCAGGATACTGTTTTTGTCACCCTGATCCATaGTCTGAATTGTTTTATACCTGTAGTCAAACTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSPGYCFCHPDP*SELFYTCSQTH Trigger: ATGAGTTTGACTACAGGTATAAAACAATTCAGACAATGGATCAGGGTGACAAAAACAGTATCCTGGTGAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||
| CDS TCA 72 bp | GTTATTAAAGAAAACCAAGTTCTGGGAGTCGTTAGTTaGTACATTGTACCAAATGATGGATGCCCATGCATT | + |
|
Preference number: 6 (lower is better) Translates to: VIKENQVLGVVS*YIVPNDGCPCI Trigger: AATGCATGGGCATCCATCATTTGGTACAATGTATCAACTAACGACTCCCAGAACTTGGTTTTCTTTAATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027277.7 ENSMUST00000168302.8 |
||