RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STAT1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026104

Ensembl transcript IDs: ENSMUST00000070968.14, ENSMUST00000186057.7, ENSMUST00000186574.7, ENSMUST00000186857.7, ENSMUST00000188681.7, ENSMUST00000189244.7, ENSMUST00000189336.2, ENSMUST00000189347.7, ENSMUST00000191435.7

Found 445 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCAGGCCTCTACCTCAGAGAGGCCTCACCGCTGGGCCTGCCCGCTaGCCTACCTTAAACTGCCATAGTTCCTGTGTCTGCAGTAGAGTA +
Preference number: 1 (lower is better)
Translates to: PRPLPQRGLTAGPAR*PTLNCHSSCVCSRV
Trigger: TACTCTACTGCAGACACAGGAACTATGGCAGTTTAAGGTAGGTCAGCGGGCAGGCCCAGCGGTGAGGCCTCTCTGAGGTAGAGGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR CCA 90 bp CGGGGTGTAAGGTGGGCTGATCTTCACCAAAGTGAAACAGTATTATaGGGCAGCACTGTAGGTGCAGCTGCGCAGCAGTCTGTGAAAGCT +
Preference number: 1 (lower is better)
Translates to: RGVRWADLHQSETVL*GSTVGAAAQQSVKA
Trigger: AGCTTTCACAGACTGCTGCGCAGCTGCACCTACAGTGCTGCCCCATAATACTGTTTCACTTTGGTGAAGATCAGCCCACCTTACACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR CCA 90 bp CTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTaGGCTGATCTTCACCAAAGTGAAACAGTATTATGGGGCAGCACT +
Preference number: 1 (lower is better)
Translates to: LCTLTVVHTCTRGVR*ADLHQSETVLWGST
Trigger: AGTGCTGCCCCATAATACTGTTTCACTTTGGTGAAGATCAGCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR TCA 90 bp TGGCTTGAGGTCTATGCAGATAAGGCTGCTCCACAGGGTTCTACATaGAGGCTACATCCATTCACCCCCAGACAGTGCCGCAAGCAAATA +
Preference number: 1 (lower is better)
Translates to: WLEVYADKAAPQGST*RLHPFTPRQCRKQI
Trigger: TATTTGCTTGCGGCACTGTCTGGGGGTGAATGGATGTAGCCTTCATGTAGAACCCTGTGGAGCAGCCTTATCTGCATAGACCTCAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189336.2
3UTR TCA 90 bp AGTGATGTGCAGCACTTGGGCACTGATTACAGACCATTACTAAAGTaGCCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTAGTCCT +
Preference number: 1 (lower is better)
Translates to: SDVQHLGTDYRPLLK*PFSSPCPKYSHSSP
Trigger: AGGACTAGAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTCACTTTAGTAATGGTCTGTAATCAGTGCCCAAGTGCTGCACATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR GCA 90 bp CCTGAGGCAGACAGATGCCACAGGTTTGTTCTGTTTACTGAGACATaGCTTCATTCCACAGTAGTCTCCAAGCAGTCAATGGAGTCCACT +
Preference number: 1 (lower is better)
Translates to: PEADRCHRFVLFTET*LHSTVVSKQSMEST
Trigger: AGTGGACTCCATTGACTGCTTGGAGACTACTGTGGAATGAAGGCATGTCTCAGTAAACAGAACAAACCTGTGGCATCTGTCTGCCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR-3UTR GCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCGGGACGGGGCTGGCCTaGGGTCCTGAACAAGCCAGT +
Preference number: 2 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRGTGLA*GPEQAS
Trigger: ACTGGCTTGTTCAGGACCGCAGGCCAGCCCCGTCCC...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
3UTR-3UTR TCA 90 bp GGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGATATGTCTCTTTCCAGTaGTGTGCAGCACTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: GRLPAIQERGSANVSRDRYVSFQ*CAALGH
Trigger: GTGCCCAAGTGCTGCACATCACTGGAAAGAGACATA...TCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR GCA 90 bp AGGACTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTGGGCTGCCTTGGCAGAAGCTaGAGTAAGGAGCACGGTTGT +
Preference number: 2 (lower is better)
Translates to: RTVHTYRGSHLHSGCKVGCLGRS*SKEHGC
Trigger: ACAACCGTGCTCCTTACTGCAGCTTCTGCCAAGGCA...GCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR GCA 90 bp TTTCCAGCTTTGTCTGATGCCTCCCTGAGGCAGACAGATGCCACAGGTTTGTTCCCAGGAGAGGGGAAGTaGCAATGTCTCCCGGGACAG +
Preference number: 2 (lower is better)
Translates to: FPALSDASLRQTDATGLFPGEGK*QCLPGQ
Trigger: CTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGG...GAACAAACCTGTGGCATCTGTCTGCCTCAGGGAGGCATCAGACAAAGCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR-3UTR TCA 90 bp TGTGAAAGCTGGCCCAGAAGAACCAACCCACGACCAGAACCATCAGGCTGTGATAGACAGGCGGATTTCTaGGTTCCAGGCCAGCCTGAT +
Preference number: 2 (lower is better)
Translates to: CESWPRRTNPRPEPSGCDRQADF*VPGQPD
Trigger: ATCAGGCTGGCCTGGAACTCAGAAATCCGCCTGTCT...ATCACAGCCTGATGGTTCTGGTCGTGGGTTGGTTCTTCTGGGCCAGCTTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR GCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCTCTTTCCAGTGATGTaGAGCACTTGGGCACTGATT +
Preference number: 2 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLLFPVM*STWALI
Trigger: AATCAGTGCCCAAGTGCTGCACATCACTGGAAAGAG...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR TCA 90 bp CATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCTATGTCTCTTTCCAGTaGTGTGCAGCACTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: HPGEGKCQCLPGQKHSSIYVSFQ*CAALGH
Trigger: GTGCCCAAGTGCTGCACATCACTGGAAAGAGACATA...GATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR TCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCAGTGCTCAGCAAATGTaGTGCTCTTTCTTTCTTGCA +
Preference number: 2 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLSAQQM*CSFFLA
Trigger: TGCAAGAAAGAAAGAGCATCACATTTGCTGAGCACT...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR GCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCTCACCTTCAGTAAGATaGATGAAGTCCTTCAGAGTA +
Preference number: 2 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLSPSVR*MKSFRV
Trigger: TACTCTGAAGGACTTCATGCATCTTACTGAAGGTGA...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR GCA 90 bp AGGACTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTGGGCGATTCAAGAAGTCACTaGTTTCTCCAAGTTTATGGC +
Preference number: 2 (lower is better)
Translates to: RTVHTYRGSHLHSGCKVGDSRSH*FLQVYG
Trigger: GCCATAAACTTGGAGAAAGCAGTGACTTCTTGAATC...GCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR TCA 90 bp AGGACTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTGGGCCCATTTTGTGTTAAGTaGCTTTCCATTTCACCTTCA +
Preference number: 2 (lower is better)
Translates to: RTVHTYRGSHLHSGCKVGPFCVK*LSISPS
Trigger: TGAAGGTGAAATGGAAAGTCACTTAACACAAAATGG...GCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR TCA 90 bp CCAGAGGCCCTGAGTTCAAATCCCAGCACCCACATGGCAGCTCAAAATTGCATCTTCTTCCCACTCACATaGAGGATGCCCACTATAGTT +
Preference number: 2 (lower is better)
Translates to: PEALSSNPSTHMAAQNCIFFPLT*RMPTIV
Trigger: AACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAA...GATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGAACTCAGGGCCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR-3UTR TCA 90 bp ATCATACTGTCAAATTCGGGGCCCACTATCCGGGACATCTCATCAAACTCCTCTCCACAGGGTTCTACATaGAGGCTACATCCATTCACC +
Preference number: 2 (lower is better)
Translates to: IILSNSGPTIRDISSNSSPQGST*RLHPFT
Trigger: GGTGAATGGATGTAGCCTTCATGTAGAACCCTGTGG...AGAGGAGTTTGATGAGATGTCCCGGATAGTGGGCCCCGAATTTGACAGTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189336.2
3UTR-3UTR GCA 90 bp AAGCTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAACCAGGAGAGGGGAAGTaGCAATGTCTCCCGGGACAG +
Preference number: 2 (lower is better)
Translates to: KLAPLMDVQRQFYSIHDQPGEGK*QCLPGQ
Trigger: CTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGG...TTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR CAA 90 bp ACAAACTTTCCAGAATGTCCAACTGTGGTGGCAACATCAGTTACATaGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGAC +
Preference number: 2 (lower is better)
Translates to: TNFPECPTVVATSVT*GKQAMSHEPVQSMD
Trigger: GTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAACTGATGTTGCCACCACAGTTGGACATTCTGGAAAGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
3UTR-3UTR GCA 90 bp GATACTCATATTTGGCTAAGGATTCAAGAAGTCACTGCTTTCTCCAAGTTTATGCCAGGAGAGGGGAAGTaGCAATGTCTCCCGGGACAG +
Preference number: 2 (lower is better)
Translates to: DTHIWLRIQEVTAFSKFMPGEGK*QCLPGQ
Trigger: CTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGG...CATAAACTTGGAGAAAGCAGTGACTTCTTGAATCCTTAGCCAAATATGAGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR GCA 90 bp AATAATGCCCTCGGGATGAAGGACAGCCTCCCAGCTCCCAGAGTAGGTAAAAGATCAGCTTATCCCAAGTaGTACATATATGCTCTGTAC +
Preference number: 2 (lower is better)
Translates to: NNALGMKDSLPAPRVGKRSAYPK*YIYALY
Trigger: GTACAGAGCATATATGTAGCACTTGGGATAAGCTGA...TCTTTTACCTACTCTGGGAGCTGGGAGGCTGTCCTTCATCCCGAGGGCATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR-3UTR TCA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTAGTGCTCAGCAAATGTaGTGCTCTTTCTTTCTTGCA +
Preference number: 2 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSSAQQM*CSFFLA
Trigger: TGCAAGAAAGAAAGAGCATCACATTTGCTGAGCACT...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR TCA 90 bp AAGCTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAATATGTCTCTTTCCAGTaGTGTGCAGCACTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: KLAPLMDVQRQFYSIHDQYVSFQ*CAALGH
Trigger: GTGCCCAAGTGCTGCACATCACTGGAAAGAGACATA...TTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR GCA 90 bp CTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAAAAATGCCTTGGCAGAAGCTaGAGTAAGGAGCACGGTTGT +
Preference number: 2 (lower is better)
Translates to: LAPLMDVQRQFYSIHDQKCLGRS*SKEHGC
Trigger: ACAACCGTGCTCCTTACTGCAGCTTCTGCCAAGGCA...TTTTTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR TCA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCAGGTTGTCTGTGGTCTaGAGTCTAGAAGGGTGGCTT +
Preference number: 2 (lower is better)
Translates to: LQSNRFLIREISTFYQQCRLSVV*SLEGWL
Trigger: AAGCCACCCTTCTAGACTTCAGACCACAGACAACCT...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189336.2
3UTR-3UTR GCA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTTCACCTTCAGTAAGATaGATGAAGTCCTTCAGAGTA +
Preference number: 2 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSSPSVR*MKSFRV
Trigger: TACTCTGAAGGACTTCATGCATCTTACTGAAGGTGA...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR GCA 90 bp AAGCTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAACTCTTTCCAGTGATGTaGAGCACTTGGGCACTGATT +
Preference number: 2 (lower is better)
Translates to: KLAPLMDVQRQFYSIHDQLFPVM*STWALI
Trigger: AATCAGTGCCCAAGTGCTGCACATCACTGGAAAGAG...TTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR GCA 90 bp CTTCATTCCACAGTAGTCTCCAAGCAGTCAATGGAGTCCACTTTAAGCTCTGCCCAAGTGCTACATATATaGTCTGTACTTAGAAAATGC +
Preference number: 2 (lower is better)
Translates to: LHSTVVSKQSMESTLSSAQVLHI*SVLRKC
Trigger: GCATTTTCTAAGTACAGAGCATATATGTAGCACTTG...GGCAGAGCTTAAAGTGGACTCCATTGACTGCTTGGAGACTACTGTGGAATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR-3UTR CCA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATCCATATGTAAAACAGTaGAAGACTTCCGGCCATCCA +
Preference number: 2 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNPYVKQ*KTSGHP
Trigger: TGGATGGCCGGAAGTCTTCCACTGTTTTACATATGG...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR TCA 90 bp AAGCTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAAAGTGCTCAGCAAATGTaGTGCTCTTTCTTTCTTGCA +
Preference number: 2 (lower is better)
Translates to: KLAPLMDVQRQFYSIHDQSAQQM*CSFFLA
Trigger: TGCAAGAAAGAAAGAGCATCACATTTGCTGAGCACT...TTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR TCA 90 bp GTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGAGTGCTCAGCAAATGTaGTGCTCTTTCTTTCTTGCA +
Preference number: 2 (lower is better)
Translates to: VLQSNRFLIREISTFYQQSAQQM*CSFFLA
Trigger: TGCAAGAAAGAAAGAGCATCACATTTGCTGAGCACT...CTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
3UTR-3UTR GCA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATTCACCTTCAGTAAGATaGATGAAGTCCTTCAGAGTA +
Preference number: 2 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNSPSVR*MKSFRV
Trigger: TACTCTGAAGGACTTCATGCATCTTACTGAAGGTGA...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR TCA 72 bp CTACCTCAGAGAGGCCTCACCGCTGGGCCTGCCCGCTaGCCTACCTTAAACTGCCATAGTTCCTGTGTCTGC +
Preference number: 3 (lower is better)
Translates to: LPQRGLTAGPAR*PTLNCHSSCVC
Trigger: GCAGACACAGGAACTATGGCAGTTTAAGGTAGGTCAGCGGGCAGGCCCAGCGGTGAGGCCTCTCTGAGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR GCA 72 bp CAGTGGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTaGCAATGTCTCCCGGGACAGAAACATTCCTCCATC +
Preference number: 3 (lower is better)
Translates to: QWKTSGHPGEGK*QCLPGQKHSSI
Trigger: GATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR CCA 72 bp AGGTGGGCTGATCTTCACCAAAGTGAAACAGTATTATaGGGCAGCACTGTAGGTGCAGCTGCGCAGCAGTCT +
Preference number: 3 (lower is better)
Translates to: RWADLHQSETVL*GSTVGAAAQQS
Trigger: AGACTGCTGCGCAGCTGCACCTACAGTGCTGCCCCATAATACTGTTTCACTTTGGTGAAGATCAGCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR CAA 90 bp TTTTCTAAATCCTTTCCAGCTTTGTCTGATGCCTCCCTGAGGCAGACAGATGCCACCGTTCTCCTCACCTaGCCCCAAATACTCGCACTC +
Preference number: 3 (lower is better)
Translates to: FSKSFPALSDASLRQTDATVLLT*PQILAL
Trigger: GAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGT...GGCATCTGTCTGCCTCAGGGAGGCATCAGACAAAGCTGGAAAGGATTTAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR TCA 72 bp CAGCACTTGGGCACTGATTACAGACCATTACTAAAGTaGCCGTTCTCCTCACCTTGCCCCAAATACTCGCAC +
Preference number: 3 (lower is better)
Translates to: QHLGTDYRPLLK*PFSSPCPKYSH
Trigger: GTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTCACTTTAGTAATGGTCTGTAATCAGTGCCCAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR CAA 90 bp CCAGAGGCCCTGAGTTCAAATCCCAGCACCCACATGGCAGCTCAAAATTGCATCTGTTGGTGTTTAGTTTaGTGTAGCCATTGCCACCAA +
Preference number: 3 (lower is better)
Translates to: PEALSSNPSTHMAAQNCICWCLV*CSHCHQ
Trigger: TTGGTGGCAATGGCTACACAAAACTAAACACCAACA...GATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGAACTCAGGGCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR-3UTR CAA 90 bp AAGCTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAAGAGAGCAACCATGCCTaGGCAGAAGCTGCAGTAAGG +
Preference number: 3 (lower is better)
Translates to: KLAPLMDVQRQFYSIHDQESNHA*AEAAVR
Trigger: CCTTACTGCAGCTTCTGCCAAGGCATGGTTGCTCTC...TTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR CCA 72 bp CCTTGCCCCAAATACTCGCACTCTAGTCCTGGTGCTTaGGTGGATCTCTTGGTCTTTGTTTACAAAATCCAT +
Preference number: 3 (lower is better)
Translates to: PCPKYSHSSPGA*VDLLVFVYKIH
Trigger: ATGGATTTTGTAAACAAAGACCAAGAGATCCACCCAAGCACCAGGACTAGAGTGCGAGTATTTGGGGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR CAA 90 bp TTTTCTAAATCCTTTCCAGCTTTGTCTGATGCCTCCCTGAGGCAGACAGATGCCGCTTGGGTGGATCTCTaGGTCTTTGTTTACAAAATC +
Preference number: 3 (lower is better)
Translates to: FSKSFPALSDASLRQTDAAWVDL*VFVYKI
Trigger: GATTTTGTAAACAAAGACCAAGAGATCCACCCAAGC...GGCATCTGTCTGCCTCAGGGAGGCATCAGACAAAGCTGGAAAGGATTTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR-3UTR CAA 90 bp TTTTCTAAATCCTTTCCAGCTTTGTCTGATGCCTCCCTGAGGCAGACAGATGCCCTTGGTCATTTCATTTaGGCATGGAAAAGAGAGGAG +
Preference number: 3 (lower is better)
Translates to: FSKSFPALSDASLRQTDALGHFI*AWKREE
Trigger: CTCCTCTCTTTTCCATGCCAAAATGAAATGACCAAG...GGCATCTGTCTGCCTCAGGGAGGCATCAGACAAAGCTGGAAAGGATTTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR TCA 72 bp TTTCTAAATCCTTTCCAGCTTTGTCTGATGCCTCCCTaGGGCAGACAGATGCCACAGGTTTGTTCTGTTTAC +
Preference number: 3 (lower is better)
Translates to: FLNPFQLCLMPP*GRQMPQVCSVY
Trigger: GTAAACAGAACAAACCTGTGGCATCTGTCTGCCTCAGGGAGGCATCAGACAAAGCTGGAAAGGATTTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR GCA 72 bp CCGCCTCAGGAAGTCCCTAGATCAGCTTATCCCAAGTaGTACATATATGCTCTGTACTTAGAAAATGCCATC +
Preference number: 3 (lower is better)
Translates to: PPQEVPRSAYPK*YIYALYLENAI
Trigger: GATGGCATTTTCTAAGTACAGAGCATATATGTAGCACTTGGGATAAGCTGATCTAGGGACTTCCTGAGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR GCA 72 bp GACAGATGCCACAGGTTTGTTCTGTTTACTGAGACATaGCTTCATTCCACAGTAGTCTCCAAGCAGTCAATG +
Preference number: 3 (lower is better)
Translates to: DRCHRFVLFTET*LHSTVVSKQSM
Trigger: CATTGACTGCTTGGAGACTACTGTGGAATGAAGGCATGTCTCAGTAAACAGAACAAACCTGTGGCATCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR-3UTR CAA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTGCTTGGGTGGATCTCTaGGTCTTTGTTTACAAAATC +
Preference number: 3 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSAWVDL*VFVYKI
Trigger: GATTTTGTAAACAAAGACCAAGAGATCCACCCAAGC...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR CAA 90 bp TTTTCTAAATCCTTTCCAGCTTTGTCTGATGCCTCCCTGAGGCAGACAGATGCCGCATTGGATCTAAAGTaGACTTTGAACTGTGCCATA +
Preference number: 3 (lower is better)
Translates to: FSKSFPALSDASLRQTDAALDLK*TLNCAI
Trigger: TATGGCACAGTTCAAAGTCAACTTTAGATCCAATGC...GGCATCTGTCTGCCTCAGGGAGGCATCAGACAAAGCTGGAAAGGATTTAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR-3UTR CAA 90 bp TTTCTTCCCACTCACATGAAGGATGCCCACTATAGTTTGATAGAGCATTGGATCGCTTGGGTGGATCTCTaGGTCTTTGTTTACAAAATC +
Preference number: 3 (lower is better)
Translates to: FLPTHMKDAHYSLIEHWIAWVDL*VFVYKI
Trigger: GATTTTGTAAACAAAGACCAAGAGATCCACCCAAGC...GATCCAATGCTCTATCAAACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR CAA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATGCTTGGGTGGATCTCTaGGTCTTTGTTTACAAAATC +
Preference number: 3 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNAWVDL*VFVYKI
Trigger: GATTTTGTAAACAAAGACCAAGAGATCCACCCAAGC...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR CAA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATTGTTGGTGTTTAGTTTaGTGTAGCCATTGCCACCAA +
Preference number: 3 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNCWCLV*CSHCHQ
Trigger: TTGGTGGCAATGGCTACACAAAACTAAACACCAACA...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
3UTR-3UTR CAA 90 bp CTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAAAAATGTTGGTGTTTAGTTTaGTGTAGCCATTGCCACCAA +
Preference number: 3 (lower is better)
Translates to: LAPLMDVQRQFYSIHDQKCWCLV*CSHCHQ
Trigger: TTGGTGGCAATGGCTACACAAAACTAAACACCAACA...TTTTTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR GCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCTGGGCGGTCCCCCGATaGAGGCGCTCTGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLWAVPR*RRSAAF
Trigger: GAAGGCAGCAGAGCGCCTGCATCGGGGGACCGCCCA...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp GACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTAGTCCTGGTGCTTGGGAGGGGCCTCTGCGGGTaGGTGGGCATGCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: DRSPHLAPNTRTLVLVLGRGLCG*VGMHGC
Trigger: ACAGCCGTGCATGCCCACTCACCCGCAGAGGCCCCT...CCCAAGCACCAGGACTAGAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGAGGGGCCTCTGCGGGTaGGTGGGCATGCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQRGLCG*VGMHGC
Trigger: ACAGCCGTGCATGCCCACTCACCCGCAGAGGCCCCT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTGGGCGGTCCCCCGATaGAGGCGCTCTGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQWAVPR*RRSAAF
Trigger: GAAGGCAGCAGAGCGCCTGCATCGGGGGACCGCCCA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGACAGCCACTGGGGAGCTaGCTGACGTTGGAGATCACC +
Preference number: 4 (lower is better)
Translates to: GRLPAIQERGSANVSRDRQPLGS*LTLEIT
Trigger: GGTGATCTCCAACGTCAGCCAGCTCCCCAGTGGCTG...TCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCACTGGGGAGCTGGCTaGCGTTGGAGATCACCACGA +
Preference number: 4 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLHWGAG*RWRSPR
Trigger: TCGTGGTGATCTCCAACGTCAGCCAGCTCCCCAGTG...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp AGGACTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTGGGCATGCAGGCGCTCTGCTaGCTTCGCTTCCACTCCACG +
Preference number: 4 (lower is better)
Translates to: RTVHTYRGSHLHSGCKVGMQALC*LRFHST
Trigger: CGTGGAGTGGAAGCGAAGGCAGCAGAGCGCCTGCAT...GCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGACCCAGCATGCTCAGCTaGTCTGCGTTCAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: GRLPAIQERGSANVSRDRPSMLS*SAFRPL
Trigger: GAGAGGTCTGAACGCAGACCAGCTGAGCATGCTGGG...TCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCAACGTCCCTGGCTGCTaGTCCTTGAGCAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLNVPGC*SLSRAR
Trigger: ACGCGCTCTGCTCAAGGACCAGCAGCCAGGGACGTT...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGGGGCCTCTGCGGGTaGGTGGGCATGCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRRGLCG*VGMHGC
Trigger: ACAGCCGTGCATGCCCACTCACCCGCAGAGGCCCCT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp GACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTAGTCCTGGTGCTTGGGCCAACTCAACACCTCTaGGAGCTGGGACCACCACGC +
Preference number: 4 (lower is better)
Translates to: DRSPHLAPNTRTLVLVLGPTQHL*ELGPPR
Trigger: GCGTGGTGGTCCCAGCTCTCAGAGGTGTTGAGTTGG...CCCAAGCACCAGGACTAGAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp CTCCACAGGGTTCTACATGAAGGCTACATCCATTCACCCCCAGACAGTGCCGCACTGGCTGCTGGTCCTTaGGCAGAGCGCGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: LHRVLHEGYIHSPPDSAALAAGP*AERVLA
Trigger: AGCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAG...TGCGGCACTGTCTGGGGGTGAATGGATGTAGCCTTCATGTAGAACCCTGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189336.2
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCTGGCTGCTGGTCCTTaGGCAGAGCGCGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQLAAGP*AERVLA
Trigger: AGCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCCGATGCAGGCGCTCTaGTGCCTTCGCTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQPMQAL*CLRFHS
Trigger: GGAGTGGAAGCGAAGGCAGCAGAGCGCCTGCATCGG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTGGGCGGTCCCCCGATaGAGGCGCTCTGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRWAVPR*RRSAAF
Trigger: GAAGGCAGCAGAGCGCCTGCATCGGGGGACCGCCCA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTAGTCCTGGTGCTTGGGAACGTCCCTGGCTGCTaGTCCTTGAGCAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: DRSPHLAPNTRTLVLVLGNVPGC*SLSRAR
Trigger: ACGCGCTCTGCTCAAGGACCAGCAGCCAGGGACGTT...CCCAAGCACCAGGACTAGAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCGGTTCACCTCCGTTCTaGGACCGTTCCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLGSPPF*DRSTHV
Trigger: CACATGGGTGGAACGGTCCCAGAACGGAGGTGAACC...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCACTGGGGAGCTGGCTaGCGTTGGAGATCACCACGA +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQHWGAG*RWRSPR
Trigger: TCGTGGTGATCTCCAACGTCAGCCAGCTCCCCAGTG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCCAACTCAACACCTCTaGGAGCTGGGACCACCACGC +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQPTQHL*ELGPPR
Trigger: GCGTGGTGGTCCCAGCTCTCAGAGGTGTTGAGTTGG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp TGTGAAAGCTGGCCCAGAAGAACCAACCCACGACCAGAACCATCAGGCTGTGATCTGGCTGCTGGTCCTTaGGCAGAGCGCGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: CESWPRRTNPRPEPSGCDLAAGP*AERVLA
Trigger: AGCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAG...ATCACAGCCTGATGGTTCTGGTCGTGGGTTGGTTCTTCTGGGCCAGCTTTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR GCA 90 bp AGGACTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTGGGCTACAGCTGGTGGACCTaGTCCAGGAACTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RTVHTYRGSHLHSGCKVGYSWWT*SRNLES
Trigger: GGACTCCAAGTTCCTGGAGCAGGTCCACCAGCTGTA...GCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGATGCAGGCGCTCTGCTaGCTTCGCTTCCACTCCACG +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQMQALC*LRFHST
Trigger: CGTGGAGTGGAAGCGAAGGCAGCAGAGCGCCTGCAT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp CAGACCATTACTAAAGTGACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTGGGCGGTCCCCCGATaGAGGCGCTCTGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: QTITKVTVLLTLPQILALWAVPR*RRSAAF
Trigger: GAAGGCAGCAGAGCGCCTGCATCGGGGGACCGCCCA...GAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTCACTTTAGTAATGGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGAGGAACGTCCCTGGCTaGTGGTCCTTGAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQRNVPG*WSLSRA
Trigger: CGCTCTGCTCAAGGACCAGCAGCCAGGGACGTTCCT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCTGTCATCGTACAGCTaGTGGACCTGCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLLSSYS*WTCSRN
Trigger: GTTCCTGGAGCAGGTCCACCAGCTGTACGATGACAG...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGATGTGAGAGGAGGTCATaGAAGCGGATGGTCGCAAAC +
Preference number: 4 (lower is better)
Translates to: GRLPAIQERGSANVSRDRCERRS*KRMVAN
Trigger: GTTTGCGACCATCCGCTTCCATGACCTCCTCTCACA...TCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCAGCCACTGGGGAGCTaGCTGACGTTGGAGATCACC +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQQPLGS*LTLEIT
Trigger: GGTGATCTCCAACGTCAGCCAGCTCCCCAGTGGCTG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGAACGTCCCTGGCTGCTaGTCCTTGAGCAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQNVPGC*SLSRAR
Trigger: ACGCGCTCTGCTCAAGGACCAGCAGCCAGGGACGTT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp TGTGAAAGCTGGCCCAGAAGAACCAACCCACGACCAGAACCATCAGGCTGTGATCACTGGGGAGCTGGCTaGCGTTGGAGATCACCACGA +
Preference number: 4 (lower is better)
Translates to: CESWPRRTNPRPEPSGCDHWGAG*RWRSPR
Trigger: TCGTGGTGATCTCCAACGTCAGCCAGCTCCCCAGTG...ATCACAGCCTGATGGTTCTGGTCGTGGGTTGGTTCTTCTGGGCCAGCTTTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCTGGCTGCTGGTCCTTaGGCAGAGCGCGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRLAAGP*AERVLA
Trigger: AGCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp TGTGAAAGCTGGCCCAGAAGAACCAACCCACGACCAGAACCATCAGGCTGTGATATGCAGGCGCTCTGCTaGCTTCGCTTCCACTCCACG +
Preference number: 4 (lower is better)
Translates to: CESWPRRTNPRPEPSGCDMQALC*LRFHST
Trigger: CGTGGAGTGGAAGCGAAGGCAGCAGAGCGCCTGCAT...ATCACAGCCTGATGGTTCTGGTCGTGGGTTGGTTCTTCTGGGCCAGCTTTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCCGATGCAGGCGCTCTaGTGCCTTCGCTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRPMQAL*CLRFHS
Trigger: GGAGTGGAAGCGAAGGCAGCAGAGCGCCTGCATCGG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp AGGACTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTGGGCCATGCTCAGCTGGTCTaGGTTCAGACCTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RTVHTYRGSHLHSGCKVGHAQLV*VQTSLG
Trigger: ACCAAGAGAGGTCTGAACGCAGACCAGCTGAGCATG...GCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTAGTCCTGGTGCTTGGGCCTGCTCCAGGAACTTaGAGTCCAGCTGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: DRSPHLAPNTRTLVLVLGPAPGT*SPAAEA
Trigger: AGCTTCAGCAGCTGGACTCCAAGTTCCTGGAGCAGG...CCCAAGCACCAGGACTAGAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGATGCTTTTCCAGCCACTaGGCCAGGTACTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: GRLPAIQERGSANVSRDRCFSSH*ARYCLI
Trigger: AATCAGACAGTACCTGGCCCAGTGGCTGGAAAAGCA...TCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAGCTGTTCCTGTTTTTaGTCGCTCTTCGCCACACCA +
Preference number: 4 (lower is better)
Translates to: GRLPAIQERGSANVSRDRSCSCF*SLFATP
Trigger: TGGTGTGGCGAAGAGCGACCAAAAACAGGAACAGCT...TCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCGTCAATCACCAAGCCTaGCTGGCACAACTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLVNHQA*LAQLGF
Trigger: GAAACCCAGTTGTGCCAGCCAGGCTTGGTGATTGAC...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp AGGACTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTGGGCGTCAATCACCAAGCCTaGCTGGCACAACTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: RTVHTYRGSHLHSGCKVGVNHQA*LAQLGF
Trigger: GAAACCCAGTTGTGCCAGCCAGGCTTGGTGATTGAC...GCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp CCAGAGGCCCTGAGTTCAAATCCCAGCACCCACATGGCAGCTCAAAATTGCATCCAGCCACTGGGGAGCTaGCTGACGTTGGAGATCACC +
Preference number: 4 (lower is better)
Translates to: PEALSSNPSTHMAAQNCIQPLGS*LTLEIT
Trigger: GGTGATCTCCAACGTCAGCCAGCTCCCCAGTGGCTG...GATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGAACTCAGGGCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCCCAGCATGCTCAGCTaGTCTGCGTTCAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQPSMLS*SAFRPL
Trigger: GAGAGGTCTGAACGCAGACCAGCTGAGCATGCTGGG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGAAGCAGGAACGTCCCTaGCTGCTGGTCCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQKQERP*LLVLEQ
Trigger: CTGCTCAAGGACCAGCAGCCAGGGACGTTCCTGCTT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGGGTTCACCTCCGTTCTaGGACCGTTCCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQGSPPF*DRSTHV
Trigger: CACATGGGTGGAACGGTCCCAGAACGGAGGTGAACC...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAAGCTCCATCGGTTCTaGTGCTTCCTTTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GRLPAIQERGSANVSRDRKLHRF*CFLWSG
Trigger: TCCAGACCAAAGGAAGCACCAGAACCGATGGAGCTT...TCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp AGGACTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTGGGCACTCCTCTGGAGACATaGGAAGCAGGTTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RTVHTYRGSHLHSGCKVGTPLET*EAGCLW
Trigger: CCACAGACAACCTGCTTCCCATGTCTCCAGAGGAGT...GCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp GACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTAGTCCTGGTGCTTGGGGGGCCAGGTACTGTCTaGTTTCCATGGGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: DRSPHLAPNTRTLVLVLGGPGTV*FPWGNC
Trigger: ACAGTTTCCCCATGGAAATCAGACAGTACCTGGCCC...CCCAAGCACCAGGACTAGAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCGAAGGAGCTCTGAATaGGCTGCTGGAAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQRRSSE*AAGRGG
Trigger: TCCTCCTCTTCCAGCAGCTCATTCAGAGCTCCTTCG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp CATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCACCACGAAGGAGCTCTaGATGAGCTGCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HPGEGKCQCLPGQKHSSITTKEL*MSCWKR
Trigger: CCTCTTCCAGCAGCTCATTCAGAGCTCCTTCGTGGT...GATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGACCACGAAGGAGCTCTaGATGAGCTGCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQTTKEL*MSCWKR
Trigger: CCTCTTCCAGCAGCTCATTCAGAGCTCCTTCGTGGT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCACTGGGGAGCTGGCTaGCGTTGGAGATCACCACGA +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRHWGAG*RWRSPR
Trigger: TCGTGGTGATCTCCAACGTCAGCCAGCTCCCCAGTG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCCAACTCAACACCTCTaGGAGCTGGGACCACCACGC +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRPTQHL*ELGPPR
Trigger: GCGTGGTGGTCCCAGCTCTCAGAGGTGTTGAGTTGG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp GGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGATCAGACCTCTCTTGGTaGCTGATGAAAACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: GRLPAIQERGSANVSRDRSDLSW*LMKTAN
Trigger: GTTGGCAGTTTTCATCAGTCACCAAGAGAGGTCTGA...TCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTACAGCTGGTGGACCTaGTCCAGGAACTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQYSWWT*SRNLES
Trigger: GGACTCCAAGTTCCTGGAGCAGGTCCACCAGCTGTA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCATGCAGGCGCTCTGCTaGCTTCGCTTCCACTCCACG +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRMQALC*LRFHST
Trigger: CGTGGAGTGGAAGCGAAGGCAGCAGAGCGCCTGCAT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGGAACGTCCCTGGCTaGTGGTCCTTGAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRRNVPG*WSLSRA
Trigger: CGCTCTGCTCAAGGACCAGCAGCCAGGGACGTTCCT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCTGTCATCGTACAGCTaGTGGACCTGCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQLSSYS*WTCSRN
Trigger: GTTCCTGGAGCAGGTCCACCAGCTGTACGATGACAG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCAGCTGTTCCTGTTTTTaGTCGCTCTTCGCCACACCA +
Preference number: 4 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLSCSCF*SLFATP
Trigger: TGGTGTGGCGAAGAGCGACCAAAAACAGGAACAGCT...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCATCACCAAGCCTGGCTaGCACAACTGGGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLITKPG*HNWVSK
Trigger: CTTTGAAACCCAGTTGTGCCAGCCAGGCTTGGTGAT...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCAGCCACTGGGGAGCTaGCTGACGTTGGAGATCACC +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRQPLGS*LTLEIT
Trigger: GGTGATCTCCAACGTCAGCCAGCTCCCCAGTGGCTG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAACGTCCCTGGCTGCTaGTCCTTGAGCAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRNVPGC*SLSRAR
Trigger: ACGCGCTCTGCTCAAGGACCAGCAGCCAGGGACGTT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCAAAAGCAGGAACGTCCCTaGCTGCTGGTCCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SRRGEVPMSPGTETFLHQKQERP*LLVLEQ
Trigger: CTGCTCAAGGACCAGCAGCCAGGGACGTTCCTGCTT...TTGATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp AATTCGGGGCCCACTATCCGGGACATCTCATCAAACTCCTCTGGAGACATGGGAAAGCAGGAACGTCCCTaGCTGCTGGTCCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: NSGPTIRDISSNSSGDMGKQERP*LLVLEQ
Trigger: CTGCTCAAGGACCAGCAGCCAGGGACGTTCCTGCTT...TCCCATGTCTCCAGAGGAGTTTGATGAGATGTCCCGGATAGTGGGCCCCGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCTTCAGGGGATTCTCTaGTATGTTCTCGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLLQGIL*YVLGSH
Trigger: ATGGCTGCCGAGAACATACCAGAGAATCCCCTGAAG...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGGGGCCAGGTACTGTCTaGTTTCCATGGGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQGPGTV*FPWGNC
Trigger: ACAGTTTCCCCATGGAAATCAGACAGTACCTGGCCC...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp TGTGAAAGCTGGCCCAGAAGAACCAACCCACGACCAGAACCATCAGGCTGTGATACCACGAAGGAGCTCTaGATGAGCTGCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: CESWPRRTNPRPEPSGCDTTKEL*MSCWKR
Trigger: CCTCTTCCAGCAGCTCATTCAGAGCTCCTTCGTGGT...ATCACAGCCTGATGGTTCTGGTCGTGGGTTGGTTCTTCTGGGCCAGCTTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCATGCTCAGCTGGTCTaGGTTCAGACCTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQHAQLV*VQTSLG
Trigger: ACCAAGAGAGGTCTGAACGCAGACCAGCTGAGCATG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp CCAGAGGCCCTGAGTTCAAATCCCAGCACCCACATGGCAGCTCAAAATTGCATCCCTGCTCCAGGAACTTaGAGTCCAGCTGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PEALSSNPSTHMAAQNCIPAPGT*SPAAEA
Trigger: AGCTTCAGCAGCTGGACTCCAAGTTCCTGGAGCAGG...GATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGAACTCAGGGCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTGTGAGAGGAGGTCATaGAAGCGGATGGTCGCAAAC +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQCERRS*KRMVAN
Trigger: GTTTGCGACCATCCGCTTCCATGACCTCCTCTCACA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGGTCAATCACCAAGCCTaGCTGGCACAACTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQVNHQA*LAQLGF
Trigger: GAAACCCAGTTGTGCCAGCCAGGCTTGGTGATTGAC...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCGACAGGAAGAGAGGTaGTCTCCAGGTCAATCACCA +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQRQEER*SPGQSP
Trigger: TGGTGATTGACCTGGAGACCACCTCTCTTCCTGTCG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCCCAGCATGCTCAGCTaGTCTGCGTTCAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRPSMLS*SAFRPL
Trigger: GAGAGGTCTGAACGCAGACCAGCTGAGCATGCTGGG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TCATACTGTCAAATTCGGGGCCCACTATCCGGGACATCTCATCAAACTCCTCTGAACGTCCCTGGCTGCTaGTCCTTGAGCAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: SYCQIRGPLSGTSHQTPLNVPGC*SLSRAR
Trigger: ACGCGCTCTGCTCAAGGACCAGCAGCCAGGGACGTT...CAGAGGAGTTTGATGAGATGTCCCGGATAGTGGGCCCCGAATTTGACAGTATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAAGCAGGAACGTCCCTaGCTGCTGGTCCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRKQERP*LLVLEQ
Trigger: CTGCTCAAGGACCAGCAGCCAGGGACGTTCCTGCTT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCGGTTCACCTCCGTTCTaGGACCGTTCCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRGSPPF*DRSTHV
Trigger: CACATGGGTGGAACGGTCCCAGAACGGAGGTGAACC...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp AGGACTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTGGGCCTCATCAAACTCCTCTaGAGACATGGGAAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: RTVHTYRGSHLHSGCKVGLIKLL*RHGKQV
Trigger: AACCTGCTTCCCATGTCTCCAGAGGAGTTTGATGAG...GCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp CCAGAGGCCCTGAGTTCAAATCCCAGCACCCACATGGCAGCTCAAAATTGCATCGGGCCAGGTACTGTCTaGTTTCCATGGGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: PEALSSNPSTHMAAQNCIGPGTV*FPWGNC
Trigger: ACAGTTTCCCCATGGAAATCAGACAGTACCTGGCCC...GATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGAACTCAGGGCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS-3UTR TCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCTCAGACAGTTGTAGATaGTCATGGACATCTGTACGG +
Preference number: 4 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLSDSCR*SWTSVR
Trigger: CCGTACAGATGTCCATGATCATCTACAACTGTCTGA...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCTTTCCCTCCTGGGCCTaGTTAAATCTTTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLFPSWA*LNLWAF
Trigger: AAATGCCCAAAGATTTAATCAGGCCCAGGAGGGAAA...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp GACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTAGTCCTGGTGCTTGGGAACATCACAGTGTTCTaGATATTTCCCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DRSPHLAPNTRTLVLVLGNITVF*IFPSWA
Trigger: GGCCCAGGAGGGAAATATTCAGAACACTGTGATGTT...CCCAAGCACCAGGACTAGAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp AGGACTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTGGGCCCTGCTCTATGCACATaGCTTGATCCTTCACATTTC +
Preference number: 4 (lower is better)
Translates to: RTVHTYRGSHLHSGCKVGPALCT*LDPSHF
Trigger: GAAATGTGAAGGATCAAGTCATGTGCATAGAGCAGG...GCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCGAAGGAGCTCTGAATaGGCTGCTGGAAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRRRSSE*AAGRGG
Trigger: TCCTCCTCTTCCAGCAGCTCATTCAGAGCTCCTTCG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCACCACGAAGGAGCTCTaGATGAGCTGCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRTTKEL*MSCWKR
Trigger: CCTCTTCCAGCAGCTCATTCAGAGCTCCTTCGTGGT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTCTGGCTGCTGGTCCTTaGGCAGAGCGCGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSLAAGP*AERVLA
Trigger: AGCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAG...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp CATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCAGGTTGTCTGTGGTCTaGAGTCTAGAAGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: HPGEGKCQCLPGQKHSSIRLSVV*SLEGWT
Trigger: AGTCCACCCTTCTAGACTTCAGACCACAGACAACCT...GATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR GCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTACAGCTGGTGGACCTaGTCCAGGAACTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRYSWWT*SRNLES
Trigger: GGACTCCAAGTTCCTGGAGCAGGTCCACCAGCTGTA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTCCGATGCAGGCGCTCTaGTGCCTTCGCTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSPMQAL*CLRFHS
Trigger: GGAGTGGAAGCGAAGGCAGCAGAGCGCCTGCATCGG...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp CCAGAGGCCCTGAGTTCAAATCCCAGCACCCACATGGCAGCTCAAAATTGCATCCTGCTGCAGGGTCTCTaGAACAATGGTGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: PEALSSNPSTHMAAQNCILLQGL*NNGEPA
Trigger: AGCTGGTTCACCATTGTTGCAGAGACCCTGCAGCAG...GATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGAACTCAGGGCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCCTGCTCCAGGAACTTaGAGTCCAGCTGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRPAPGT*SPAAEA
Trigger: AGCTTCAGCAGCTGGACTCCAAGTTCCTGGAGCAGG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCTGTCATCGTACAGCTaGTGGACCTGCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRLSSYS*WTCSRN
Trigger: GTTCCTGGAGCAGGTCCACCAGCTGTACGATGACAG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTGCTTTTCCAGCCACTaGGCCAGGTACTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQCFSSH*ARYCLI
Trigger: AATCAGACAGTACCTGGCCCAGTGGCTGGAAAAGCA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGAGCTGTTCCTGTTTTTaGTCGCTCTTCGCCACACCA +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQSCSCF*SLFATP
Trigger: TGGTGTGGCGAAGAGCGACCAAAAACAGGAACAGCT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCCTGGCTGGCACAACTaGGTTTCAAAGCTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQPGWHN*VSKLRE
Trigger: CTCTCTTAGCTTTGAAACCCAGTTGTGCCAGCCAGG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGATCACCAAGCCTGGCTaGCACAACTGGGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQITKPG*HNWVSK
Trigger: CTTTGAAACCCAGTTGTGCCAGCCAGGCTTGGTGAT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TGTGAAAGCTGGCCCAGAAGAACCAACCCACGACCAGAACCATCAGGCTGTGATCGACAGGAAGAGAGGTaGTCTCCAGGTCAATCACCA +
Preference number: 4 (lower is better)
Translates to: CESWPRRTNPRPEPSGCDRQEER*SPGQSP
Trigger: TGGTGATTGACCTGGAGACCACCTCTCTTCCTGTCG...ATCACAGCCTGATGGTTCTGGTCGTGGGTTGGTTCTTCTGGGCCAGCTTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp TCATACTGTCAAATTCGGGGCCCACTATCCGGGACATCTCATCAAACTCCTCTGGGTTCACCTCCGTTCTaGGACCGTTCCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: SYCQIRGPLSGTSHQTPLGSPPF*DRSTHV
Trigger: CACATGGGTGGAACGGTCCCAGAACGGAGGTGAACC...CAGAGGAGTTTGATGAGATGTCCCGGATAGTGGGCCCCGAATTTGACAGTATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCTTCAGGGGATTCTCTaGTATGTTCTCGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQLQGIL*YVLGSH
Trigger: ATGGCTGCCGAGAACATACCAGAGAATCCCCTGAAG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAGGTCTTTGTCAATATTaGGGTACAGATACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRLPAIQERGSANVSRDRGLCQY*GTDTSG
Trigger: CCCTGAAGTATCTGTACCCCAATATTGACAAAGACC...TCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGAAGCTCCATCGGTTCTaGTGCTTCCTTTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQKLHRF*CFLWSG
Trigger: TCCAGACCAAAGGAAGCACCAGAACCGATGGAGCTT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTAGTCCTGGTGCTTGGGCTCATCAAACTCCTCTaGAGACATGGGAAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: DRSPHLAPNTRTLVLVLGLIKLL*RHGKQV
Trigger: AACCTGCTTCCCATGTCTCCAGAGGAGTTTGATGAG...CCCAAGCACCAGGACTAGAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCGGGCCAGGTACTGTCTaGTTTCCATGGGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRGPGTV*FPWGNC
Trigger: ACAGTTTCCCCATGGAAATCAGACAGTACCTGGCCC...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp CATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCAACATCACAGTGTTCTaGATATTTCCCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HPGEGKCQCLPGQKHSSINITVF*IFPSWA
Trigger: GGCCCAGGAGGGAAATATTCAGAACACTGTGATGTT...GATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGAACATCACAGTGTTCTaGATATTTCCCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQNITVF*IFPSWA
Trigger: GGCCCAGGAGGGAAATATTCAGAACACTGTGATGTT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTCTCTGCAACAATGGTaGACCAGCTTTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQSLQQW*TSFAAD
Trigger: ATCAGCTGCAAAGCTGGTTCACCATTGTTGCAGAGA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp AAGCTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAAAGGGGCCTCTGCGGGTaGGTGGGCATGCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: KLAPLMDVQRQFYSIHDQRGLCG*VGMHGC
Trigger: ACAGCCGTGCATGCCCACTCACCCGCAGAGGCCCCT...TTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCTGCTGCAGGGTCTCTaGAACAATGGTGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRLLQGL*NNGEPA
Trigger: AGCTGGTTCACCATTGTTGCAGAGACCCTGCAGCAG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCATGCTCAGCTGGTCTaGGTTCAGACCTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRHAQLV*VQTSLG
Trigger: ACCAAGAGAGGTCTGAACGCAGACCAGCTGAGCATG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTAGGAACGTCCCTGGCTaGTGGTCCTTGAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSRNVPG*WSLSRA
Trigger: CGCTCTGCTCAAGGACCAGCAGCCAGGGACGTTCCT...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR GCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCTCCATCGGTTCTGGTaGTTCCTTTGGTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQLHRFW*FLWSGI
Trigger: TATTCCAGACCAAAGGAAGCACCAGAACCGATGGAG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp AATAATGCCCTCGGGATGAAGGACAGCCTCCCAGCTCCCAGAGTAGGTAAAAGATCATCGTACAGCTGGTaGACCTGCTCCAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: NNALGMKDSLPAPRVGKRSSYSW*TCSRNL
Trigger: CAAGTTCCTGGAGCAGGTCCACCAGCTGTACGATGA...TCTTTTACCTACTCTGGGAGCTGGGAGGCTGTCCTTCATCCCGAGGGCATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTGTGAGAGGAGGTCATaGAAGCGGATGGTCGCAAAC +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRCERRS*KRMVAN
Trigger: GTTTGCGACCATCCGCTTCCATGACCTCCTCTCACA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTCTTCGCCACACCATTaGCTTCACCTTCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQSSPHH*LHLLCS
Trigger: AGAACAGAGAAGGTGAAGCCAATGGTGTGGCGAAGA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAATTAAAAACATCTTGTaGAGCAGCAGCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GRLPAIQERGSANVSRDRIKNIL*SSSCSC
Trigger: ACAGGAACAGCTGCTGCTCCACAAGATGTTTTTAAT...TCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCGACAGGAAGAGAGGTaGTCTCCAGGTCAATCACCA +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRRQEER*SPGQSP
Trigger: TGGTGATTGACCTGGAGACCACCTCTCTTCCTGTCG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTAACGTCCCTGGCTGCTaGTCCTTGAGCAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSNVPGC*SLSRAR
Trigger: ACGCGCTCTGCTCAAGGACCAGCAGCCAGGGACGTT...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp CAAATTCGGGGCCCACTATCCGGGACATCTCATCAAACTCCTCTGGAGACATGGCTTCAGGGGATTCTCTaGTATGTTCTCGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: QIRGPLSGTSHQTPLETWLQGIL*YVLGSH
Trigger: ATGGCTGCCGAGAACATACCAGAGAATCCCCTGAAG...CCATGTCTCCAGAGGAGTTTGATGAGATGTCCCGGATAGTGGGCCCCGAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp TCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCAAAAGCTCCATCGGTTCTaGTGCTTCCTTTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SRRGEVPMSPGTETFLHQKLHRF*CFLWSG
Trigger: TCCAGACCAAAGGAAGCACCAGAACCGATGGAGCTT...TTGATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp CATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCCTCATCAAACTCCTCTaGAGACATGGGAAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: HPGEGKCQCLPGQKHSSILIKLL*RHGKQV
Trigger: AACCTGCTTCCCATGTCTCCAGAGGAGTTTGATGAG...GATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTCAGACAGTTGTAGATaGTCATGGACATCTGTACGG +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQSDSCR*SWTSVR
Trigger: CCGTACAGATGTCCATGATCATCTACAACTGTCTGA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTTTCCCTCCTGGGCCTaGTTAAATCTTTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQFPSWA*LNLWAF
Trigger: AAATGCCCAAAGATTTAATCAGGCCCAGGAGGGAAA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCCTGCTCTATGCACATaGCTTGATCCTTCACATTTC +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQPALCT*LDPSHF
Trigger: GAAATGTGAAGGATCAAGTCATGTGCATAGAGCAGG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCTCACCTTCTCTGTTCTaGGAGGTTTTGCATTTAAAG +
Preference number: 4 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLSPSLF*EVLHLK
Trigger: CTTTAAATGCAAAACCTCTCAGAACAGAGAAGGTGA...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp GGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGATTCCGTATGTTGTGCTaGAACAAGAAATTATTCTCC +
Preference number: 4 (lower is better)
Translates to: GRLPAIQERGSANVSRDRFRMLC*NKKLFS
Trigger: GGAGAATAATTTCTTGTTGCAGCACAACATACGGAA...TCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp CATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCCCTGGAGATTACGCTTaGTTTTCCGTATGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: HPGEGKCQCLPGQKHSSIPGDYA*FSVCCA
Trigger: AGCACAACATACGGAAAAGCAAGCGTAATCTCCAGG...GATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCCTGGAGATTACGCTTaGTTTTCCGTATGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQPGDYA*FSVCCA
Trigger: AGCACAACATACGGAAAAGCAAGCGTAATCTCCAGG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCATGGGCGGTCCCCCGATaGAGGCGCTCTGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SNRFLIREISTFYQQCSAWAVPR*RRSAAF
Trigger: GAAGGCAGCAGAGCGCCTGCATCGGGGGACCGCCCA...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTGCTTTTCCAGCCACTaGGCCAGGTACTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRCFSSH*ARYCLI
Trigger: AATCAGACAGTACCTGGCCCAGTGGCTGGAAAAGCA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCTGTTCCTGTTTTTaGTCGCTCTTCGCCACACCA +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRSCSCF*SLFATP
Trigger: TGGTGTGGCGAAGAGCGACCAAAAACAGGAACAGCT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp AATAATGCCCTCGGGATGAAGGACAGCCTCCCAGCTCCCAGAGTAGGTAAAAGAATCACCAAGCCTGGCTaGCACAACTGGGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: NNALGMKDSLPAPRVGKRITKPG*HNWVSK
Trigger: CTTTGAAACCCAGTTGTGCCAGCCAGGCTTGGTGAT...TCTTTTACCTACTCTGGGAGCTGGGAGGCTGTCCTTCATCCCGAGGGCATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCATCACCAAGCCTGGCTaGCACAACTGGGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRITKPG*HNWVSK
Trigger: CTTTGAAACCCAGTTGTGCCAGCCAGGCTTGGTGAT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp AATAATGCCCTCGGGATGAAGGACAGCCTCCCAGCTCCCAGAGTAGGTAAAAGAAGAAGGAGAGATTCCTaGGCTCTGTCACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: NNALGMKDSLPAPRVGKRRRRDS*ALSPAC
Trigger: ACATGCTGGTGACAGAGCCCAGGAATCTCTCCTTCT...TCTTTTACCTACTCTGGGAGCTGGGAGGCTGTCCTTCATCCCGAGGGCATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGAAGGAGAGATTCCTaGGCTCTGTCACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRRRRDS*ALSPAC
Trigger: ACATGCTGGTGACAGAGCCCAGGAATCTCTCCTTCT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTAAGCAGGAACGTCCCTaGCTGCTGGTCCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSKQERP*LLVLEQ
Trigger: CTGCTCAAGGACCAGCAGCCAGGGACGTTCCTGCTT...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCTTCAGGGGATTCTCTaGTATGTTCTCGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRLQGIL*YVLGSH
Trigger: ATGGCTGCCGAGAACATACCAGAGAATCCCCTGAAG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTAGTCCTGGTGCTTGGGGTGCTTCCTTTGGTCTaGAATAATACTTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: DRSPHLAPNTRTLVLVLGVLPLV*NNTSQR
Trigger: CCTTTGGGAAGTATTATTCCAGACCAAAGGAAGCAC...CCCAAGCACCAGGACTAGAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAAGCTCCATCGGTTCTaGTGCTTCCTTTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRKLHRF*CFLWSG
Trigger: TCCAGACCAAAGGAAGCACCAGAACCGATGGAGCTT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp CAGACCATTACTAAAGTGACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCACTCCTCTGGAGACATaGGAAGCAGGTTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QTITKVTVLLTLPQILALTPLET*EAGCLW
Trigger: CCACAGACAACCTGCTTCCCATGTCTCCAGAGGAGT...GAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTCACTTTAGTAATGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp TCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCAATCAGACAGTTGTAGATaGTCATGGACATCTGTACGG +
Preference number: 4 (lower is better)
Translates to: SRRGEVPMSPGTETFLHQSDSCR*SWTSVR
Trigger: CCGTACAGATGTCCATGATCATCTACAACTGTCTGA...TTGATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp CCAGAGGCCCTGAGTTCAAATCCCAGCACCCACATGGCAGCTCAAAATTGCATCTTTCCCTCCTGGGCCTaGTTAAATCTTTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: PEALSSNPSTHMAAQNCIFPSWA*LNLWAF
Trigger: AAATGCCCAAAGATTTAATCAGGCCCAGGAGGGAAA...GATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGAACTCAGGGCCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAACATCACAGTGTTCTaGATATTTCCCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRNITVF*IFPSWA
Trigger: GGCCCAGGAGGGAAATATTCAGAACACTGTGATGTT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp GACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTAGTCCTGGTGCTTGGGTCTATGCACATGACTTaGTCCTTCACATTTCTGACT +
Preference number: 4 (lower is better)
Translates to: DRSPHLAPNTRTLVLVLGSMHMT*SFTFLT
Trigger: AGTCAGAAATGTGAAGGATCAAGTCATGTGCATAGA...CCCAAGCACCAGGACTAGAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGATTCTTCTAGGGTCTTaGTTTCCTGCTCTATGCACA +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQILLGS*FPALCT
Trigger: TGTGCATAGAGCAGGAAATCAAGACCCTAGAAGAAT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTCTCTGCAACAATGGTaGACCAGCTTTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRSLQQW*TSFAAD
Trigger: ATCAGCTGCAAAGCTGGTTCACCATTGTTGCAGAGA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTCGAAGGAGCTCTGAATaGGCTGCTGGAAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSRRSSE*AAGRGG
Trigger: TCCTCCTCTTCCAGCAGCTCATTCAGAGCTCCTTCG...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp GATACTCATATTTGGCTAAGGATTCAAGAAGTCACTGCTTTCTCCAAGTTTATGAGGGGCCTCTGCGGGTaGGTGGGCATGCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: DTHIWLRIQEVTAFSKFMRGLCG*VGMHGC
Trigger: ACAGCCGTGCATGCCCACTCACCCGCAGAGGCCCCT...CATAAACTTGGAGAAAGCAGTGACTTCTTGAATCCTTAGCCAAATATGAGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp TTTCTTCCCACTCACATGAAGGATGCCCACTATAGTTTGATAGAGCATTGGATCCCAACTCAACACCTCTaGGAGCTGGGACCACCACGC +
Preference number: 4 (lower is better)
Translates to: FLPTHMKDAHYSLIEHWIPTQHL*ELGPPR
Trigger: GCGTGGTGGTCCCAGCTCTCAGAGGTGTTGAGTTGG...GATCCAATGCTCTATCAAACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTCAGACCTCTCTTGGTaGCTGATGAAAACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRSDLSW*LMKTAN
Trigger: GTTGGCAGTTTTCATCAGTCACCAAGAGAGGTCTGA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp AAGCTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAACTGGCTGCTGGTCCTTaGGCAGAGCGCGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: KLAPLMDVQRQFYSIHDQLAAGP*AERVLA
Trigger: AGCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAG...TTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp CAGACCATTACTAAAGTGACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCAGGTTGTCTGTGGTCTaGAGTCTAGAAGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: QTITKVTVLLTLPQILALRLSVV*SLEGWT
Trigger: AGTCCACCCTTCTAGACTTCAGACCACAGACAACCT...GAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTCACTTTAGTAATGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR GCA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATCCGATGCAGGCGCTCTaGTGCCTTCGCTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNPMQAL*CLRFHS
Trigger: GGAGTGGAAGCGAAGGCAGCAGAGCGCCTGCATCGG...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCTCCATCGGTTCTGGTaGTTCCTTTGGTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRLHRFW*FLWSGI
Trigger: TATTCCAGACCAAAGGAAGCACCAGAACCGATGGAG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTAGTCCTGGTGCTTGGGTGTACGGGATCTTCTTaGAAGTTATCCTGGAGATTA +
Preference number: 4 (lower is better)
Translates to: DRSPHLAPNTRTLVLVLGCTGSS*KLSWRL
Trigger: TAATCTCCAGGATAACTTCCAAGAAGATCCCGTACA...CCCAAGCACCAGGACTAGAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp TTTCCAGCTTTGTCTGATGCCTCCCTGAGGCAGACAGATGCCACAGGTTTGTTCTCTTCGCCACACCATTaGCTTCACCTTCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FPALSDASLRQTDATGLFSSPHH*LHLLCS
Trigger: AGAACAGAGAAGGTGAAGCCAATGGTGTGGCGAAGA...GAACAAACCTGTGGCATCTGTCTGCCTCAGGGAGGCATCAGACAAAGCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTCTTCGCCACACCATTaGCTTCACCTTCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRSSPHH*LHLLCS
Trigger: AGAACAGAGAAGGTGAAGCCAATGGTGTGGCGAAGA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp CATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCGGTCTTTGTCAATATTaGGGTACAGATACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: HPGEGKCQCLPGQKHSSIGLCQY*GTDTSG
Trigger: CCCTGAAGTATCTGTACCCCAATATTGACAAAGACC...GATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGGTGCTTCCTTTGGTCTaGAATAATACTTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQVLPLV*NNTSQR
Trigger: CCTTTGGGAAGTATTATTCCAGACCAAAGGAAGCAC...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTTCTGGTGCTTCCTTTaGTCTGGAATAATACTTCCC +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQFWCFL*SGIILP
Trigger: GGGAAGTATTATTCCAGACCAAAGGAAGCACCAGAA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
3UTR CAA 72 bp TCTGATGCCTCCCTGAGGCAGACAGATGCCACAGGTTaGTTCTGTTTACTGAGACATGCCTTCATTCCACAG +
Preference number: 4 (lower is better)
Translates to: SDASLRQTDATG*FCLLRHAFIPQ
Trigger: CTGTGGAATGAAGGCATGTCTCAGTAAACAGAACAAACCTGTGGCATCTGTCTGCCTCAGGGAGGCATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
3UTR CAA 72 bp CCAGAATGTCCAACTGTGGTGGCAACATCAGTTACATaGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: PECPTVVATSVT*GKQAMSHEPVQ
Trigger: TTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAACTGATGTTGCCACCACAGTTGGACATTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTCAGACAGTTGTAGATaGTCATGGACATCTGTACGG +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRSDSCR*SWTSVR
Trigger: CCGTACAGATGTCCATGATCATCTACAACTGTCTGA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTTTCCCTCCTGGGCCTaGTTAAATCTTTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRFPSWA*LNLWAF
Trigger: AAATGCCCAAAGATTTAATCAGGCCCAGGAGGGAAA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTCTATGCACATGACTTaGTCCTTCACATTTCTGACT +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQSMHMT*SFTFLT
Trigger: AGTCAGAAATGTGAAGGATCAAGTCATGTGCATAGA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTCACCTTCTCTGTTCTaGGAGGTTTTGCATTTAAAG +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQSPSLF*EVLHLK
Trigger: CTTTAAATGCAAAACCTCTCAGAACAGAGAAGGTGA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCCTGGAGATTACGCTTaGTTTTCCGTATGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRPGDYA*FSVCCA
Trigger: AGCACAACATACGGAAAAGCAAGCGTAATCTCCAGG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCCCGATGCAGGCGCTCTaGTGCCTTCGCTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: LQSNRFLIREISTFYQQCPMQAL*CLRFHS
Trigger: GGAGTGGAAGCGAAGGCAGCAGAGCGCCTGCATCGG...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp CATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCTGTACGGGATCTTCTTaGAAGTTATCCTGGAGATTA +
Preference number: 4 (lower is better)
Translates to: HPGEGKCQCLPGQKHSSICTGSS*KLSWRL
Trigger: TAATCTCCAGGATAACTTCCAAGAAGATCCCGTACA...GATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTGTACGGGATCTTCTTaGAAGTTATCCTGGAGATTA +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQCTGSS*KLSWRL
Trigger: TAATCTCCAGGATAACTTCCAAGAAGATCCCGTACA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp CAGACCATTACTAAAGTGACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTCTTCGCCACACCATTaGCTTCACCTTCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QTITKVTVLLTLPQILALSSPHH*LHLLCS
Trigger: AGAACAGAGAAGGTGAAGCCAATGGTGTGGCGAAGA...GAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTCACTTTAGTAATGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGATTAAAAACATCTTGTaGAGCAGCAGCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQIKNIL*SSSCSC
Trigger: ACAGGAACAGCTGCTGCTCCACAAGATGTTTTTAAT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTTCTTCCCACTCACATGAAGGATGCCCACTATAGTTTGATAGAGCATTGGATCAAGCAGGAACGTCCCTaGCTGCTGGTCCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FLPTHMKDAHYSLIEHWIKQERP*LLVLEQ
Trigger: CTGCTCAAGGACCAGCAGCCAGGGACGTTCCTGCTT...GATCCAATGCTCTATCAAACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp CTTCATTCCACAGTAGTCTCCAAGCAGTCAATGGAGTCCACTTTAAGCTCTGCCCTTCAGGGGATTCTCTaGTATGTTCTCGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LHSTVVSKQSMESTLSSALQGIL*YVLGSH
Trigger: ATGGCTGCCGAGAACATACCAGAGAATCCCCTGAAG...GGCAGAGCTTAAAGTGGACTCCATTGACTGCTTGGAGACTACTGTGGAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCATTCTTCTAGGGTCTTaGTTTCCTGCTCTATGCACA +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRILLGS*FPALCT
Trigger: TGTGCATAGAGCAGGAAATCAAGACCCTAGAAGAAT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp CCAGAGGCCCTGAGTTCAAATCCCAGCACCCACATGGCAGCTCAAAATTGCATCTCACCTTCTCTGTTCTaGGAGGTTTTGCATTTAAAG +
Preference number: 4 (lower is better)
Translates to: PEALSSNPSTHMAAQNCISPSLF*EVLHLK
Trigger: CTTTAAATGCAAAACCTCTCAGAACAGAGAAGGTGA...GATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGAACTCAGGGCCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS-3UTR TCA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCCACTGGGGAGCTGGCTaGCGTTGGAGATCACCACGA +
Preference number: 4 (lower is better)
Translates to: LQSNRFLIREISTFYQQCHWGAG*RWRSPR
Trigger: TCGTGGTGATCTCCAACGTCAGCCAGCTCCCCAGTG...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTTCCGTATGTTGTGCTaGAACAAGAAATTATTCTCC +
Preference number: 4 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQFRMLC*NKKLFS
Trigger: GGAGAATAATTTCTTGTTGCAGCACAACATACGGAA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp CAGACCATTACTAAAGTGACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCCCTGGAGATTACGCTTaGTTTTCCGTATGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: QTITKVTVLLTLPQILALPGDYA*FSVCCA
Trigger: AGCACAACATACGGAAAAGCAAGCGTAATCTCCAGG...GAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTCACTTTAGTAATGGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAATGCAGGCGCTCTGCTaGCTTCGCTTCCACTCCACG +
Preference number: 4 (lower is better)
Translates to: SNRFLIREISTFYQQCSAMQALC*LRFHST
Trigger: CGTGGAGTGGAAGCGAAGGCAGCAGAGCGCCTGCAT...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAGGAACGTCCCTGGCTaGTGGTCCTTGAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SNRFLIREISTFYQQCSARNVPG*WSLSRA
Trigger: CGCTCTGCTCAAGGACCAGCAGCCAGGGACGTTCCT...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR GCA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCAGGAACGTCCCTGGCTaGTGGTCCTTGAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LQSNRFLIREISTFYQQCRNVPG*WSLSRA
Trigger: CGCTCTGCTCAAGGACCAGCAGCCAGGGACGTTCCT...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp CCAGAGGCCCTGAGTTCAAATCCCAGCACCCACATGGCAGCTCAAAATTGCATCATTAAAAACATCTTGTaGAGCAGCAGCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PEALSSNPSTHMAAQNCIIKNIL*SSSCSC
Trigger: ACAGGAACAGCTGCTGCTCCACAAGATGTTTTTAAT...GATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGAACTCAGGGCCTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS-3UTR CCA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTCCTGGCTGGCACAACTaGGTTTCAAAGCTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSPGWHN*VSKLRE
Trigger: CTCTCTTAGCTTTGAAACCCAGTTGTGCCAGCCAGG...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp AAGCTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAACCCAGCATGCTCAGCTaGTCTGCGTTCAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: KLAPLMDVQRQFYSIHDQPSMLS*SAFRPL
Trigger: GAGAGGTCTGAACGCAGACCAGCTGAGCATGCTGGG...TTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATGGTTCACCTCCGTTCTaGGACCGTTCCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNGSPPF*DRSTHV
Trigger: CACATGGGTGGAACGGTCCCAGAACGGAGGTGAACC...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCGGTCTTTGTCAATATTaGGGTACAGATACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRGLCQY*GTDTSG
Trigger: CCCTGAAGTATCTGTACCCCAATATTGACAAAGACC...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCGTGCTTCCTTTGGTCTaGAATAATACTTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRVLPLV*NNTSQR
Trigger: CCTTTGGGAAGTATTATTCCAGACCAAAGGAAGCAC...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTCTATGCACATGACTTaGTCCTTCACATTTCTGACT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRSMHMT*SFTFLT
Trigger: AGTCAGAAATGTGAAGGATCAAGTCATGTGCATAGA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTCACCTTCTCTGTTCTaGGAGGTTTTGCATTTAAAG +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRSPSLF*EVLHLK
Trigger: CTTTAAATGCAAAACCTCTCAGAACAGAGAAGGTGA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR TCA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATCGAAGGAGCTCTGAATaGGCTGCTGGAAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNRRSSE*AAGRGG
Trigger: TCCTCCTCTTCCAGCAGCTCATTCAGAGCTCCTTCG...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp AGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCCTGGCTGCTGGTCCTTaGGCAGAGCGCGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: SKMHEVLQSNRFLIREISLAAGP*AERVLA
Trigger: AGCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAG...GGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR GCA 90 bp TCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCAATTCCGTATGTTGTGCTaGAACAAGAAATTATTCTCC +
Preference number: 4 (lower is better)
Translates to: SRRGEVPMSPGTETFLHQFRMLC*NKKLFS
Trigger: GGAGAATAATTTCTTGTTGCAGCACAACATACGGAA...TTGATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp GATACTCATATTTGGCTAAGGATTCAAGAAGTCACTGCTTTCTCCAAGTTTATGAGGAACGTCCCTGGCTaGTGGTCCTTGAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: DTHIWLRIQEVTAFSKFMRNVPG*WSLSRA
Trigger: CGCTCTGCTCAAGGACCAGCAGCCAGGGACGTTCCT...CATAAACTTGGAGAAAGCAGTGACTTCTTGAATCCTTAGCCAAATATGAGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR GCA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTCTCCATCGGTTCTGGTaGTTCCTTTGGTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSLHRFW*FLWSGI
Trigger: TATTCCAGACCAAAGGAAGCACCAGAACCGATGGAG...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATCTGTCATCGTACAGCTaGTGGACCTGCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNLSSYS*WTCSRN
Trigger: GTTCCTGGAGCAGGTCCACCAGCTGTACGATGACAG...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCATTAAAAACATCTTGTaGAGCAGCAGCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRIKNIL*SSSCSC
Trigger: ACAGGAACAGCTGCTGCTCCACAAGATGTTTTTAAT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CCA 90 bp TTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAATGTGATGCAGCCACTGGGGAGCTaGCTGACGTTGGAGATCACC +
Preference number: 4 (lower is better)
Translates to: FLIREISTFYQQCSANVMQPLGS*LTLEIT
Trigger: GGTGATCTCCAACGTCAGCCAGCTCCCCAGTGGCTG...CATCACATTTGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCCCCAGCATGCTCAGCTaGTCTGCGTTCAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: LQSNRFLIREISTFYQQCPSMLS*SAFRPL
Trigger: GAGAGGTCTGAACGCAGACCAGCTGAGCATGCTGGG...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp TTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAATGTGATGAACGTCCCTGGCTGCTaGTCCTTGAGCAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: FLIREISTFYQQCSANVMNVPGC*SLSRAR
Trigger: ACGCGCTCTGCTCAAGGACCAGCAGCCAGGGACGTT...CATCACATTTGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
3UTR CAA 72 bp GAGTTCAAATCCCAGCACCCACATGGCAGCTCAAAATaGCATCTGACTGTGATCCCATTTGACTGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: EFKSQHPHGSSK*HLTVIPFDCSL
Trigger: GAGACTACAGTCAAATGGGATCACAGTCAGATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp CAGACCATTACTAAAGTGACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCTCTATGCACATGACTTaGTCCTTCACATTTCTGACT +
Preference number: 4 (lower is better)
Translates to: QTITKVTVLLTLPQILALSMHMT*SFTFLT
Trigger: AGTCAGAAATGTGAAGGATCAAGTCATGTGCATAGA...GAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTCACTTTAGTAATGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCACGAAGGAGCTCTGAATaGGCTGCTGGAAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SNRFLIREISTFYQQCSARRSSE*AAGRGG
Trigger: TCCTCCTCTTCCAGCAGCTCATTCAGAGCTCCTTCG...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp AGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCCCAACTCAACACCTCTaGGAGCTGGGACCACCACGC +
Preference number: 4 (lower is better)
Translates to: SKMHEVLQSNRFLIREISPTQHL*ELGPPR
Trigger: GCGTGGTGGTCCCAGCTCTCAGAGGTGTTGAGTTGG...GGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCATACAGCTGGTGGACCTaGTCCAGGAACTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SNRFLIREISTFYQQCSAYSWWT*SRNLES
Trigger: GGACTCCAAGTTCCTGGAGCAGGTCCACCAGCTGTA...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTTCCGTATGTTGTGCTaGAACAAGAAATTATTCTCC +
Preference number: 4 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRFRMLC*NKKLFS
Trigger: GGAGAATAATTTCTTGTTGCAGCACAACATACGGAA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR GCA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATCTGCTGCAGGGTCTCTaGAACAATGGTGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNLLQGL*NNGEPA
Trigger: AGCTGGTTCACCATTGTTGCAGAGACCCTGCAGCAG...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp AGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCAGGAACGTCCCTGGCTaGTGGTCCTTGAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SKMHEVLQSNRFLIREISRNVPG*WSLSRA
Trigger: CGCTCTGCTCAAGGACCAGCAGCCAGGGACGTTCCT...GGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCACCTGCTCCAGGAACTTaGAGTCCAGCTGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SNRFLIREISTFYQQCSAPAPGT*SPAAEA
Trigger: AGCTTCAGCAGCTGGACTCCAAGTTCCTGGAGCAGG...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGCTGTCATCGTACAGCTaGTGGACCTGCTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VLQSNRFLIREISTFYQQLSSYS*WTCSRN
Trigger: GTTCCTGGAGCAGGTCCACCAGCTGTACGATGACAG...CTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GATACTCATATTTGGCTAAGGATTCAAGAAGTCACTGCTTTCTCCAAGTTTATGAAGCAGGAACGTCCCTaGCTGCTGGTCCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: DTHIWLRIQEVTAFSKFMKQERP*LLVLEQ
Trigger: CTGCTCAAGGACCAGCAGCCAGGGACGTTCCTGCTT...CATAAACTTGGAGAAAGCAGTGACTTCTTGAATCCTTAGCCAAATATGAGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp TTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAATGTGATGGGTTCACCTCCGTTCTaGGACCGTTCCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: FLIREISTFYQQCSANVMGSPPF*DRSTHV
Trigger: CACATGGGTGGAACGGTCCCAGAACGGAGGTGAACC...CATCACATTTGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp TTTCTTCCCACTCACATGAAGGATGCCCACTATAGTTTGATAGAGCATTGGATCCTTCAGGGGATTCTCTaGTATGTTCTCGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: FLPTHMKDAHYSLIEHWILQGIL*YVLGSH
Trigger: ATGGCTGCCGAGAACATACCAGAGAATCCCCTGAAG...GATCCAATGCTCTATCAAACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp TTGAGGTCTATGCAGATAAGGCTGCTCCACAGGGTTCTACATGAAGGCTACATCGGTCTTTGTCAATATTaGGGTACAGATACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LRSMQIRLLHRVLHEGYIGLCQY*GTDTSG
Trigger: CCCTGAAGTATCTGTACCCCAATATTGACAAAGACC...GATGTAGCCTTCATGTAGAACCCTGTGGAGCAGCCTTATCTGCATAGACCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp CTTCATTCCACAGTAGTCTCCAAGCAGTCAATGGAGTCCACTTTAAGCTCTGCCTTCTGGTGCTTCCTTTaGTCTGGAATAATACTTCCC +
Preference number: 4 (lower is better)
Translates to: LHSTVVSKQSMESTLSSAFWCFL*SGIILP
Trigger: GGGAAGTATTATTCCAGACCAAAGGAAGCACCAGAA...GGCAGAGCTTAAAGTGGACTCCATTGACTGCTTGGAGACTACTGTGGAATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp TGCTCATCATACTGTCAAATTCGGGGCCCACTATCCGGGACATCTCATCAAACTTTCTGGTGCTTCCTTTaGTCTGGAATAATACTTCCC +
Preference number: 4 (lower is better)
Translates to: CSSYCQIRGPLSGTSHQTFWCFL*SGIILP
Trigger: GGGAAGTATTATTCCAGACCAAAGGAAGCACCAGAA...AGTTTGATGAGATGTCCCGGATAGTGGGCCCCGAATTTGACAGTATGATGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189336.2
3UTR CAA 72 bp TTTATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATaGGTGGTGCACACCTTTAATCCCAGCACTCGGGAG +
Preference number: 4 (lower is better)
Translates to: FIGSSLKLSHQA*VVHTFNPSTRE
Trigger: CTCCCGAGTGCTGGGATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp GTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGGGGCCAGGTACTGTCTaGTTTCCATGGGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: VLQSNRFLIREISTFYQQGPGTV*FPWGNC
Trigger: ACAGTTTCCCCATGGAAATCAGACAGTACCTGGCCC...CTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTATTCTTCTAGGGTCTTaGTTTCCTGCTCTATGCACA +
Preference number: 4 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSILLGS*FPALCT
Trigger: TGTGCATAGAGCAGGAAATCAAGACCCTAGAAGAAT...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp GATACTCATATTTGGCTAAGGATTCAAGAAGTCACTGCTTTCTCCAAGTTTATGTACAGCTGGTGGACCTaGTCCAGGAACTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: DTHIWLRIQEVTAFSKFMYSWWT*SRNLES
Trigger: GGACTCCAAGTTCCTGGAGCAGGTCCACCAGCTGTA...CATAAACTTGGAGAAAGCAGTGACTTCTTGAATCCTTAGCCAAATATGAGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCCATGCTCAGCTGGTCTaGGTTCAGACCTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LQSNRFLIREISTFYQQCHAQLV*VQTSLG
Trigger: ACCAAGAGAGGTCTGAACGCAGACCAGCTGAGCATG...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTGTGAGAGGAGGTCATaGAAGCGGATGGTCGCAAAC +
Preference number: 4 (lower is better)
Translates to: LQSNRFLIREISTFYQQCCERRS*KRMVAN
Trigger: GTTTGCGACCATCCGCTTCCATGACCTCCTCTCACA...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp AGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCGGTTCACCTCCGTTCTaGGACCGTTCCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: SKMHEVLQSNRFLIREISGSPPF*DRSTHV
Trigger: CACATGGGTGGAACGGTCCCAGAACGGAGGTGAACC...GGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp AAGCTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAACTTCAGGGGATTCTCTaGTATGTTCTCGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: KLAPLMDVQRQFYSIHDQLQGIL*YVLGSH
Trigger: ATGGCTGCCGAGAACATACCAGAGAATCCCCTGAAG...TTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTGGTCTTTGTCAATATTaGGGTACAGATACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSGLCQY*GTDTSG
Trigger: CCCTGAAGTATCTGTACCCCAATATTGACAAAGACC...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTGTGCTTCCTTTGGTCTaGAATAATACTTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSVLPLV*NNTSQR
Trigger: CCTTTGGGAAGTATTATTCCAGACCAAAGGAAGCAC...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATAAGCTCCATCGGTTCTaGTGCTTCCTTTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNKLHRF*CFLWSG
Trigger: TCCAGACCAAAGGAAGCACCAGAACCGATGGAGCTT...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAACTCCTCTGGAGACATaGGAAGCAGGTTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SNRFLIREISTFYQQCSATPLET*EAGCLW
Trigger: CCACAGACAACCTGCTTCCCATGTCTCCAGAGGAGT...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp GTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGACTCCTCTGGAGACATaGGAAGCAGGTTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: VLQSNRFLIREISTFYQQTPLET*EAGCLW
Trigger: CCACAGACAACCTGCTTCCCATGTCTCCAGAGGAGT...CTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR GCA 90 bp GATACTCATATTTGGCTAAGGATTCAAGAAGTCACTGCTTTCTCCAAGTTTATGCTGCTGCAGGGTCTCTaGAACAATGGTGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: DTHIWLRIQEVTAFSKFMLLQGL*NNGEPA
Trigger: AGCTGGTTCACCATTGTTGCAGAGACCCTGCAGCAG...CATAAACTTGGAGAAAGCAGTGACTTCTTGAATCCTTAGCCAAATATGAGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp GATACTCATATTTGGCTAAGGATTCAAGAAGTCACTGCTTTCTCCAAGTTTATGCATGCTCAGCTGGTCTaGGTTCAGACCTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: DTHIWLRIQEVTAFSKFMHAQLV*VQTSLG
Trigger: ACCAAGAGAGGTCTGAACGCAGACCAGCTGAGCATG...CATAAACTTGGAGAAAGCAGTGACTTCTTGAATCCTTAGCCAAATATGAGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GATACTCATATTTGGCTAAGGATTCAAGAAGTCACTGCTTTCTCCAAGTTTATGTGTGAGAGGAGGTCATaGAAGCGGATGGTCGCAAAC +
Preference number: 4 (lower is better)
Translates to: DTHIWLRIQEVTAFSKFMCERRS*KRMVAN
Trigger: GTTTGCGACCATCCGCTTCCATGACCTCCTCTCACA...CATAAACTTGGAGAAAGCAGTGACTTCTTGAATCCTTAGCCAAATATGAGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCCCTGGCTGGCACAACTaGGTTTCAAAGCTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LQSNRFLIREISTFYQQCPGWHN*VSKLRE
Trigger: CTCTCTTAGCTTTGAAACCCAGTTGTGCCAGCCAGG...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAATCACCAAGCCTGGCTaGCACAACTGGGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SNRFLIREISTFYQQCSAITKPG*HNWVSK
Trigger: CTTTGAAACCCAGTTGTGCCAGCCAGGCTTGGTGAT...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp TTCACCTTCAGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGACGACAGGAAGAGAGGTaGTCTCCAGGTCAATCACCA +
Preference number: 4 (lower is better)
Translates to: FTFSKMHEVLQSNRFLIRRQEER*SPGQSP
Trigger: TGGTGATTGACCTGGAGACCACCTCTCTTCCTGTCG...TCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACTGAAGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCAAGCTCCATCGGTTCTaGTGCTTCCTTTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LQSNRFLIREISTFYQQCKLHRF*CFLWSG
Trigger: TCCAGACCAAAGGAAGCACCAGAACCGATGGAGCTT...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR TCA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATTCAGACAGTTGTAGATaGTCATGGACATCTGTACGG +
Preference number: 4 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNSDSCR*SWTSVR
Trigger: CCGTACAGATGTCCATGATCATCTACAACTGTCTGA...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp GTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTCTCTGCAACAATGGTaGACCAGCTTTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VLQSNRFLIREISTFYQQSLQQW*TSFAAD
Trigger: ATCAGCTGCAAAGCTGGTTCACCATTGTTGCAGAGA...CTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCATCTCTGCAACAATGGTaGACCAGCTTTGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SNRFLIREISTFYQQCSASLQQW*TSFAAD
Trigger: ATCAGCTGCAAAGCTGGTTCACCATTGTTGCAGAGA...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCATCAGACCTCTCTTGGTaGCTGATGAAAACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SNRFLIREISTFYQQCSASDLSW*LMKTAN
Trigger: GTTGGCAGTTTTCATCAGTCACCAAGAGAGGTCTGA...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp TTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAATGTGATGAGGTTGTCTGTGGTCTaGAGTCTAGAAGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: FLIREISTFYQQCSANVMRLSVV*SLEGWT
Trigger: AGTCCACCCTTCTAGACTTCAGACCACAGACAACCT...CATCACATTTGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp TTCACCTTCAGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAAGGTTGTCTGTGGTCTaGAGTCTAGAAGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: FTFSKMHEVLQSNRFLIRRLSVV*SLEGWT
Trigger: AGTCCACCCTTCTAGACTTCAGACCACAGACAACCT...TCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACTGAAGGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp AGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCGGAAGAGAGGTGGTCTaGAAGGGAACAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: SKMHEVLQSNRFLIREISGREVV*KGTKTS
Trigger: GGAGGTCTTTGTTCCCTTTCAGACCACCTCTCTTCC...GGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186057.7
CDS-3UTR GCA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCCTCCATCGGTTCTGGTaGTTCCTTTGGTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: LQSNRFLIREISTFYQQCLHRFW*FLWSGI
Trigger: TATTCCAGACCAAAGGAAGCACCAGAACCGATGGAG...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR GCA 90 bp GTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGCTCCATCGGTTCTGGTaGTTCCTTTGGTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: VLQSNRFLIREISTFYQQLHRFW*FLWSGI
Trigger: TATTCCAGACCAAAGGAAGCACCAGAACCGATGGAG...CTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp TTCACCTTCAGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGATGCTTTTCCAGCCACTaGGCCAGGTACTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: FTFSKMHEVLQSNRFLIRCFSSH*ARYCLI
Trigger: AATCAGACAGTACCTGGCCCAGTGGCTGGAAAAGCA...TCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACTGAAGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GATACTCATATTTGGCTAAGGATTCAAGAAGTCACTGCTTTCTCCAAGTTTATGTGCTTTTCCAGCCACTaGGCCAGGTACTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: DTHIWLRIQEVTAFSKFMCFSSH*ARYCLI
Trigger: AATCAGACAGTACCTGGCCCAGTGGCTGGAAAAGCA...CATAAACTTGGAGAAAGCAGTGACTTCTTGAATCCTTAGCCAAATATGAGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp CTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAAAAATCTTCGCCACACCATTaGCTTCACCTTCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LAPLMDVQRQFYSIHDQKSSPHH*LHLLCS
Trigger: AGAACAGAGAAGGTGAAGCCAATGGTGTGGCGAAGA...TTTTTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp TTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAATGTGATGCCTGGCTGGCACAACTaGGTTTCAAAGCTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: FLIREISTFYQQCSANVMPGWHN*VSKLRE
Trigger: CTCTCTTAGCTTTGAAACCCAGTTGTGCCAGCCAGG...CATCACATTTGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp TTCACCTTCAGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAAGAAGGAGAGATTCCTaGGCTCTGTCACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: FTFSKMHEVLQSNRFLIRRRRDS*ALSPAC
Trigger: ACATGCTGGTGACAGAGCCCAGGAATCTCTCCTTCT...TCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACTGAAGGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp TTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAATGTGATGAGAAGGAGAGATTCCTaGGCTCTGTCACCAGCATGT +
Preference number: 4 (lower is better)
Translates to: FLIREISTFYQQCSANVMRRRDS*ALSPAC
Trigger: ACATGCTGGTGACAGAGCCCAGGAATCTCTCCTTCT...CATCACATTTGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp TTTCTTCCCACTCACATGAAGGATGCCCACTATAGTTTGATAGAGCATTGGATCGGTCTTTGTCAATATTaGGGTACAGATACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: FLPTHMKDAHYSLIEHWIGLCQY*GTDTSG
Trigger: CCCTGAAGTATCTGTACCCCAATATTGACAAAGACC...GATCCAATGCTCTATCAAACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp TTTCTTCCCACTCACATGAAGGATGCCCACTATAGTTTGATAGAGCATTGGATCTTCTGGTGCTTCCTTTaGTCTGGAATAATACTTCCC +
Preference number: 4 (lower is better)
Translates to: FLPTHMKDAHYSLIEHWIFWCFL*SGIILP
Trigger: GGGAAGTATTATTCCAGACCAAAGGAAGCACCAGAA...GATCCAATGCTCTATCAAACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CCA 90 bp GTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGCGACAGGAAGAGAGGTaGTCTGAAAGGGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: VLQSNRFLIREISTFYQQRQEER*SEREQR
Trigger: TCTTTGTTCCCTTTCAGACCACCTCTCTTCCTGTCG...CTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186057.7
CDS-3UTR TCA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCATTTCCCTCCTGGGCCTaGTTAAATCTTTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: SNRFLIREISTFYQQCSAFPSWA*LNLWAF
Trigger: AAATGCCCAAAGATTTAATCAGGCCCAGGAGGGAAA...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp GTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGCCTGCTCTATGCACATaGCTTGATCCTTCACATTTC +
Preference number: 4 (lower is better)
Translates to: VLQSNRFLIREISTFYQQPALCT*LDPSHF
Trigger: GAAATGTGAAGGATCAAGTCATGTGCATAGAGCAGG...CTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCCCTGCTCTATGCACATaGCTTGATCCTTCACATTTC +
Preference number: 4 (lower is better)
Translates to: LQSNRFLIREISTFYQQCPALCT*LDPSHF
Trigger: GAAATGTGAAGGATCAAGTCATGTGCATAGAGCAGG...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp TTTCTTCCCACTCACATGAAGGATGCCCACTATAGTTTGATAGAGCATTGGATCTCACCTTCTCTGTTCTaGGAGGTTTTGCATTTAAAG +
Preference number: 4 (lower is better)
Translates to: FLPTHMKDAHYSLIEHWISPSLF*EVLHLK
Trigger: CTTTAAATGCAAAACCTCTCAGAACAGAGAAGGTGA...GATCCAATGCTCTATCAAACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp TTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAATGTGATGTCAGACCTCTCTTGGTaGCTGATGAAAACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: FLIREISTFYQQCSANVMSDLSW*LMKTAN
Trigger: GTTGGCAGTTTTCATCAGTCACCAAGAGAGGTCTGA...CATCACATTTGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp GATACTCATATTTGGCTAAGGATTCAAGAAGTCACTGCTTTCTCCAAGTTTATGCTCCATCGGTTCTGGTaGTTCCTTTGGTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: DTHIWLRIQEVTAFSKFMLHRFW*FLWSGI
Trigger: TATTCCAGACCAAAGGAAGCACCAGAACCGATGGAG...CATAAACTTGGAGAAAGCAGTGACTTCTTGAATCCTTAGCCAAATATGAGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR GCA 90 bp TTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAATGTGATGCTCCATCGGTTCTGGTaGTTCCTTTGGTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: FLIREISTFYQQCSANVMLHRFW*FLWSGI
Trigger: TATTCCAGACCAAAGGAAGCACCAGAACCGATGGAG...CATCACATTTGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp AGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCAGCTGTTCCTGTTTTTaGTCGCTCTTCGCCACACCA +
Preference number: 4 (lower is better)
Translates to: SKMHEVLQSNRFLIREISSCSCF*SLFATP
Trigger: TGGTGTGGCGAAGAGCGACCAAAAACAGGAACAGCT...GGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp AGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCAAGCTCCATCGGTTCTaGTGCTTCCTTTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SKMHEVLQSNRFLIREISKLHRF*CFLWSG
Trigger: TCCAGACCAAAGGAAGCACCAGAACCGATGGAGCTT...GGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp TTCACCTTCAGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGACTCATCAAACTCCTCTaGAGACATGGGAAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: FTFSKMHEVLQSNRFLIRLIKLL*RHGKQV
Trigger: AACCTGCTTCCCATGTCTCCAGAGGAGTTTGATGAG...TCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACTGAAGGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR GCA 90 bp GATACTCATATTTGGCTAAGGATTCAAGAAGTCACTGCTTTCTCCAAGTTTATGCCTGGAGATTACGCTTaGTTTTCCGTATGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: DTHIWLRIQEVTAFSKFMPGDYA*FSVCCA
Trigger: AGCACAACATACGGAAAAGCAAGCGTAATCTCCAGG...CATAAACTTGGAGAAAGCAGTGACTTCTTGAATCCTTAGCCAAATATGAGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp GTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGGTGCTTCCTTTGGTCTaGAATAATACTTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: VLQSNRFLIREISTFYQQVLPLV*NNTSQR
Trigger: CCTTTGGGAAGTATTATTCCAGACCAAAGGAAGCAC...CTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCGTGCTTCCTTTGGTCTaGAATAATACTTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LQSNRFLIREISTFYQQCVLPLV*NNTSQR
Trigger: CCTTTGGGAAGTATTATTCCAGACCAAAGGAAGCAC...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp CTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAAAAATTCTGGTGCTTCCTTTaGTCTGGAATAATACTTCCC +
Preference number: 4 (lower is better)
Translates to: LAPLMDVQRQFYSIHDQKFWCFL*SGIILP
Trigger: GGGAAGTATTATTCCAGACCAAAGGAAGCACCAGAA...TTTTTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR TCA 90 bp TTCACCTTCAGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAATTCTTCTAGGGTCTTaGTTTCCTGCTCTATGCACA +
Preference number: 4 (lower is better)
Translates to: FTFSKMHEVLQSNRFLIRILLGS*FPALCT
Trigger: TGTGCATAGAGCAGGAAATCAAGACCCTAGAAGAAT...TCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACTGAAGGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR TCA 90 bp TTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAATGTGATGATTCTTCTAGGGTCTTaGTTTCCTGCTCTATGCACA +
Preference number: 4 (lower is better)
Translates to: FLIREISTFYQQCSANVMILLGS*FPALCT
Trigger: TGTGCATAGAGCAGGAAATCAAGACCCTAGAAGAAT...CATCACATTTGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAATTAAAAACATCTTGTaGAGCAGCAGCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SNRFLIREISTFYQQCSAIKNIL*SSSCSC
Trigger: ACAGGAACAGCTGCTGCTCCACAAGATGTTTTTAAT...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR GCA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTTCCGTATGTTGTGCTaGAACAAGAAATTATTCTCC +
Preference number: 4 (lower is better)
Translates to: LQSNRFLIREISTFYQQCFRMLC*NKKLFS
Trigger: GGAGAATAATTTCTTGTTGCAGCACAACATACGGAA...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp TTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAATGTGATGTGTACGGGATCTTCTTaGAAGTTATCCTGGAGATTA +
Preference number: 4 (lower is better)
Translates to: FLIREISTFYQQCSANVMCTGSS*KLSWRL
Trigger: TAATCTCCAGGATAACTTCCAAGAAGATCCCGTACA...CATCACATTTGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CCA 90 bp AGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCGTGCTTCCTTTGGTCTaGAATAATACTTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SKMHEVLQSNRFLIREISVLPLV*NNTSQR
Trigger: CCTTTGGGAAGTATTATTCCAGACCAAAGGAAGCAC...GGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CCA 90 bp AGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCTTCTGGTGCTTCCTTTaGTCTGGAATAATACTTCCC +
Preference number: 4 (lower is better)
Translates to: SKMHEVLQSNRFLIREISFWCFL*SGIILP
Trigger: GGGAAGTATTATTCCAGACCAAAGGAAGCACCAGAA...GGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR TCA 90 bp AGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCTCTATGCACATGACTTaGTCCTTCACATTTCTGACT +
Preference number: 4 (lower is better)
Translates to: SKMHEVLQSNRFLIREISSMHMT*SFTFLT
Trigger: AGTCAGAAATGTGAAGGATCAAGTCATGTGCATAGA...GGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS GCA 90 bp ACCAGCTTTGCAGCTGATCCAGGCAGGCGTTGGGCGGTCCCCCGATaGAGGCGCTCTGCTGCCTTCGCTTCCACTCCACGAGCTCGTCAT +
Preference number: 5 (lower is better)
Translates to: TSFAADPGRRWAVPR*RRSAAFASTPRARH
Trigger: ATGACGAGCTCGTGGAGTGGAAGCGAAGGCAGCAGAGCGCCTGCATCGGGGGACCGCCCAACGCCTGCCTGGATCAGCTGCAAAGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS TCA 90 bp ATCTGCTGCAGGGTCTCTGCAACAATGGTGAACCAGCTTTGCAGCTaGTCCAGGCAGGCGTTGGGCGGTCCCCCGATGCAGGCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: ICCRVSATMVNQLCS*SRQALGGPPMQALC
Trigger: GCAGAGCGCCTGCATCGGGGGACCGCCCAACGCCTGCCTGGATCAGCTGCAAAGCTGGTTCACCATTGTTGCAGAGACCCTGCAGCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCCTGGCTGCTGGTCCTaGAGCAGAGCGCGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQPGCWS*SRARSR
Trigger: GCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAGG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp CATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCCCTGGCTGCTGGTCCTaGAGCAGAGCGCGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: HPGEGKCQCLPGQKHSSIPGCWS*SRARSR
Trigger: GCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAGG...GATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CAA 90 bp TGTGAAAGCTGGCCCAGAAGAACCAACCCACGACCAGAACCATCAGGCTGTGATCCTGGCTGCTGGTCCTaGAGCAGAGCGCGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: CESWPRRTNPRPEPSGCDPGCWS*SRARSR
Trigger: GCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAGG...ATCACAGCCTGATGGTTCTGGTCGTGGGTTGGTTCTTCTGGGCCAGCTTTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS CCA 90 bp GGCTGTACTGGTCGTCCAGCTGTGAGAGGAGGTCATGGAAGCGGATaGTCGCAAACGAGACATCATAGGCAGCGTGCTCCCAGTCTTGCT +
Preference number: 5 (lower is better)
Translates to: GCTGRPAVRGGHGSG*SQTRHHRQRAPSLA
Trigger: AGCAAGACTGGGAGCACGCTGCCTATGATGTCTCGTTTGCGACCATCCGCTTCCATGACCTCCTCTCACAGCTGGACGACCAGTACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000188681.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp ATAAGGCTGCTCCACAGGGTTCTACATGAAGGCTACATCCATTCACCCCCAGACCCTGGCTGCTGGTCCTaGAGCAGAGCGCGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: IRLLHRVLHEGYIHSPPDPGCWS*SRARSR
Trigger: GCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAGG...GTCTGGGGGTGAATGGATGTAGCCTTCATGTAGAACCCTGTGGAGCAGCCTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189336.2
CDS-3UTR CAA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCCTGGCTGCTGGTCCTaGAGCAGAGCGCGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRPGCWS*SRARSR
Trigger: GCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAGG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp AGGACTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTGGGCGCTGCCAGACTTCCGTaGGTGGATTCTTCCATGTTC +
Preference number: 5 (lower is better)
Translates to: RTVHTYRGSHLHSGCKVGAARLP*VDSSMF
Trigger: GAACATGGAAGAATCCACCAACGGAAGTCTGGCAGC...GCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp CAGACCATTACTAAAGTGACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCCCTGGCTGCTGGTCCTaGAGCAGAGCGCGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: QTITKVTVLLTLPQILALPGCWS*SRARSR
Trigger: GCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAGG...GAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTCACTTTAGTAATGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS TCA 90 bp CGTGCTCCCAGTCTTGCTTTTCCAGCCACTGGGCCAGGTACTGTCTaGTTTCCATGGGGAAACTGTCATCGTACAGCTGGTGGACCTGCT +
Preference number: 5 (lower is better)
Translates to: RAPSLAFPATGPGTV*FPWGNCHRTAGGPA
Trigger: AGCAGGTCCACCAGCTGTACGATGACAGTTTCCCCATGGAAATCAGACAGTACCTGGCCCAGTGGCTGGAAAAGCAAGACTGGGAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000188681.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS TCA 90 bp AGCTGGCTGACGTTGGAGATCACCACGACAGGAAGAGAGGTGGTCTaGAAGGGAACAAAGACCTCCAGGTCAATCACCAAGCCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SWLTLEITTTGREVV*KGTKTSRSITKPGW
Trigger: CCAGCCAGGCTTGGTGATTGACCTGGAGGTCTTTGTTCCCTTTCAGACCACCTCTCTTCCTGTCGTGGTGATCTCCAACGTCAGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186057.7
CDS-3UTR CAA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGAATGGTGAACCAGCTTaGCAGCTGATCCAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQNGEPA*QLIQAG
Trigger: GCCTGCCTGGATCAGCTGCAAAGCTGGTTCACCATT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp CGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCACCAACAGTCTCAGCTaGACAGTGAACTGTACCCCA +
Preference number: 5 (lower is better)
Translates to: RPSRRGEVPMSPGTETFLTNSLS*TVNCTP
Trigger: TGGGGTACAGTTCACTGTCAAGCTGAGACTGTTGGT...GAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS GCA 90 bp CTCCTCCAGCTTTTTAAGCTGCTGACGGATCTGCTGCAGGGTCTCTaGAACAATGGTGAACCAGCTTTGCAGCTGATCCAGGCAGGCGTT +
Preference number: 5 (lower is better)
Translates to: LLQLFKLLTDLLQGL*NNGEPALQLIQAGV
Trigger: AACGCCTGCCTGGATCAGCTGCAAAGCTGGTTCACCATTGTTGCAGAGACCCTGCAGCAGATCCGTCAGCAGCTTAAAAAGCTGGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp CCAGAGGCCCTGAGTTCAAATCCCAGCACCCACATGGCAGCTCAAAATTGCATCAATGGTGAACCAGCTTaGCAGCTGATCCAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: PEALSSNPSTHMAAQNCINGEPA*QLIQAG
Trigger: GCCTGCCTGGATCAGCTGCAAAGCTGGTTCACCATT...GATGCAATTTTGAGCTGCCATGTGGGTGCTGGGATTTGAACTCAGGGCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS-3UTR CAA 90 bp TCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCAAAATGGTGAACCAGCTTaGCAGCTGATCCAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: SRRGEVPMSPGTETFLHQNGEPA*QLIQAG
Trigger: GCCTGCCTGGATCAGCTGCAAAGCTGGTTCACCATT...TTGATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGGCTGCCAGACTTCCGTaGGTGGATTCTTCCATGTTC +
Preference number: 5 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQAARLP*VDSSMF
Trigger: GAACATGGAAGAATCCACCAACGGAAGTCTGGCAGC...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp TGTGAAAGCTGGCCCAGAAGAACCAACCCACGACCAGAACCATCAGGCTGTGATGCGCGTTCTCGCTCCTaGCTGATGAAGCCCATAATG +
Preference number: 5 (lower is better)
Translates to: CESWPRRTNPRPEPSGCDARSRS*LMKPIM
Trigger: CATTATGGGCTTCATCAGCAAGGAGCGAGAACGCGC...ATCACAGCCTGATGGTTCTGGTCGTGGGTTGGTTCTTCTGGGCCAGCTTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CAA 90 bp TCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCAAGCGCGTTCTCGCTCCTaGCTGATGAAGCCCATAATG +
Preference number: 5 (lower is better)
Translates to: SRRGEVPMSPGTETFLHQARSRS*LMKPIM
Trigger: CATTATGGGCTTCATCAGCAAGGAGCGAGAACGCGC...TTGATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CAA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAATGGTGAACCAGCTTaGCAGCTGATCCAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRNGEPA*QLIQAG
Trigger: GCCTGCCTGGATCAGCTGCAAAGCTGGTTCACCATT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp CATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCACCAACAGTCTCAGCTaGACAGTGAACTGTACCCCA +
Preference number: 5 (lower is better)
Translates to: HPGEGKCQCLPGQKHSSITNSLS*TVNCTP
Trigger: TGGGGTACAGTTCACTGTCAAGCTGAGACTGTTGGT...GATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTTTCTGTTCCTTCAGTaGCAGGTGTCGGAACTCAGC +
Preference number: 5 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQFLFLQ*QVSELS
Trigger: GCTGAGTTCCGACACCTGCAACTGAAGGAACAGAAA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp AATAATGCCCTCGGGATGAAGGACAGCCTCCCAGCTCCCAGAGTAGGTAAAAGAGCGCGTTCTCGCTCCTaGCTGATGAAGCCCATAATG +
Preference number: 5 (lower is better)
Translates to: NNALGMKDSLPAPRVGKRARSRS*LMKPIM
Trigger: CATTATGGGCTTCATCAGCAAGGAGCGAGAACGCGC...TCTTTTACCTACTCTGGGAGCTGGGAGGCTGTCCTTCATCCCGAGGGCATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
CDS-3UTR CAA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCGCGCGTTCTCGCTCCTaGCTGATGAAGCCCATAATG +
Preference number: 5 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRARSRS*LMKPIM
Trigger: CATTATGGGCTTCATCAGCAAGGAGCGAGAACGCGC...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS GCA 90 bp GGCCCCTCATTAGTTCTGTTCCCAGCGTTTTTCTGTTCCTTCAGTTaGAGGTGTCGGAACTCAGCTGCCAGACTTCCGTTGGTGGATTCT +
Preference number: 5 (lower is better)
Translates to: GPSLVLFPAFFCSFS*RCRNSAARLPLVDS
Trigger: AGAATCCACCAACGGAAGTCTGGCAGCTGAGTTCCGACACCTGCAACTGAAGGAACAGAAAAACGCTGGGAACAGAACTAATGAGGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CCA 90 bp CACCACGACAGGAAGAGAGGTGGTCTCCAGGTCAATCACCAAGCCTaGCTGGCACAACTGGGTTTCAAAGCTAAGAGAGTGAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: HHDRKRGGLQVNHQA*LAQLGFKAKRVKFF
Trigger: GAAGAACTTCACTCTCTTAGCTTTGAAACCCAGTTGTGCCAGCCAGGCTTGGTGATTGACCTGGAGACCACCTCTCTTCCTGTCGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp AGGACTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTGGGCTGCGTACCCAAGATGTaGAACTTCCGAAATCCTTTA +
Preference number: 5 (lower is better)
Translates to: RTVHTYRGSHLHSGCKVGCVPKM*NFRNPL
Trigger: TAAAGGATTTCGGAAGTTCAACATCTTGGGTACGCA...GCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCGCTGCCAGACTTCCGTaGGTGGATTCTTCCATGTTC +
Preference number: 5 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRAARLP*VDSSMF
Trigger: GAACATGGAAGAATCCACCAACGGAAGTCTGGCAGC...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp AGGACTGTGCACACTTACCGTGGTTCACACCTGCACTCGGGGTGTAAGGTGGGCTGGTCTTTGTCAATATaGGGGTACAGATACTTCAGG +
Preference number: 5 (lower is better)
Translates to: RTVHTYRGSHLHSGCKVGWSLSI*GYRYFR
Trigger: CCTGAAGTATCTGTACCCCAATATTGACAAAGACCA...GCCCACCTTACACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CAA 90 bp GGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAGAAATCAACTCAGTCTaGATGTATCCAGTTCGCTTA +
Preference number: 5 (lower is better)
Translates to: GRLPAIQERGSANVSRDREINSV*MYPVRL
Trigger: TAAGCGAACTGGATACATCAAGACTGAGTTGATTTC...TCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS CCA 90 bp TTGTGCTGCAACAAGAAATTATTCTCCAGAGAAAAGCGGCTGTACTaGTCGTCCAGCTGTGAGAGGAGGTCATGGAAGCGGATGGTCGCA +
Preference number: 5 (lower is better)
Translates to: LCCNKKLFSREKRLY*SSSCERRSWKRMVA
Trigger: TGCGACCATCCGCTTCCATGACCTCCTCTCACAGCTGGACGACCAGTACAGCCGCTTTTCTCTGGAGAATAATTTCTTGTTGCAGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000188681.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGAGCATTAAAAACATCTaGTGGAGCAGCAGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQSIKNI*WSSSCS
Trigger: GGAACAGCTGCTGCTCCACAAGATGTTTTTAATGCT...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp CATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCAGCATTAAAAACATCTaGTGGAGCAGCAGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: HPGEGKCQCLPGQKHSSISIKNI*WSSSCS
Trigger: GGAACAGCTGCTGCTCCACAAGATGTTTTTAATGCT...GATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCACCAACAGTCTCAGCTaGACAGTGAACTGTACCCCA +
Preference number: 5 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRTNSLS*TVNCTP
Trigger: TGGGGTACAGTTCACTGTCAAGCTGAGACTGTTGGT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp GGAAGACTTCCGGCCATCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGATTCTCGTTCACATCTTaGTCAAATGAGACTTTCACT +
Preference number: 5 (lower is better)
Translates to: GRLPAIQERGSANVSRDRFSFTS*SNETFT
Trigger: AGTGAAAGTCTCATTTGACAAAGATGTGAACGAGAA...TCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGATGGCCGGAAGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp AATAATGCCCTCGGGATGAAGGACAGCCTCCCAGCTCCCAGAGTAGGTAAAAGATTTCTGTTCCTTCAGTaGCAGGTGTCGGAACTCAGC +
Preference number: 5 (lower is better)
Translates to: NNALGMKDSLPAPRVGKRFLFLQ*QVSELS
Trigger: GCTGAGTTCCGACACCTGCAACTGAAGGAACAGAAA...TCTTTTACCTACTCTGGGAGCTGGGAGGCTGTCCTTCATCCCGAGGGCATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS-3UTR CAA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGGTTCTGGTGCTTCCTTaGGTCTGGAATAATACTTCC +
Preference number: 5 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQVLVLP*VWNNTS
Trigger: GGAAGTATTATTCCAGACCAAAGGAAGCACCAGAAC...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS TCA 90 bp GAAATTATTCTCCAGAGAAAAGCGGCTGTACTGGTCGTCCAGCTGTaGGAGGAGGTCATGGAAGCGGATGGTCGCAAACGAGACATCATA +
Preference number: 5 (lower is better)
Translates to: EIILQRKAAVLVVQL*EEVMEADGRKRDII
Trigger: TATGATGTCTCGTTTGCGACCATCCGCTTCCATGACCTCCTCTCACAGCTGGACGACCAGTACAGCCGCTTTTCTCTGGAGAATAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000188681.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS GCA 90 bp CTGATGAAGCCCATAATGCACCCATCATTCCAGAGGCACAGCAGGTaGTTCTTAATGAGCTCTAGGATGGTGTCAATCCAAGGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LMKPIMHPSFQRHSR*FLMSSRMVSIQGQK
Trigger: CTTCTGGCCTTGGATTGACACCATCCTAGAGCTCATTAAGAAGCACCTGCTGTGCCTCTGGAATGATGGGTGCATTATGGGCTTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CCA 90 bp GGTGGTCTGAAAGGGAACAAAGACCTCCAGGTCAATCACCAAGCCTaGCTGGCACAACTGGGTTTCAAAGCTAAGAGAGTGAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: GGLKGNKDLQVNHQA*LAQLGFKAKRVKFF
Trigger: GAAGAACTTCACTCTCTTAGCTTTGAAACCCAGTTGTGCCAGCCAGGCTTGGTGATTGACCTGGAGGTCTTTGTTCCCTTTCAGACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186057.7
CDS-3UTR CAA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGCTCTATGCACATGACTaGATCCTTCACATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQLYAHD*ILHISD
Trigger: GTCAGAAATGTGAAGGATCAAGTCATGTGCATAGAG...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTGCGTACCCAAGATGTaGAACTTCCGAAATCCTTTA +
Preference number: 5 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQCVPKM*NFRNPL
Trigger: TAAAGGATTTCGGAAGTTCAACATCTTGGGTACGCA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTGGTCTTTGTCAATATaGGGGTACAGATACTTCAGG +
Preference number: 5 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQWSLSI*GYRYFR
Trigger: CCTGAAGTATCTGTACCCCAATATTGACAAAGACCA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp TGTGAAAGCTGGCCCAGAAGAACCAACCCACGACCAGAACCATCAGGCTGTGATCTCTATGCACATGACTaGATCCTTCACATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: CESWPRRTNPRPEPSGCDLYAHD*ILHISD
Trigger: GTCAGAAATGTGAAGGATCAAGTCATGTGCATAGAG...ATCACAGCCTGATGGTTCTGGTCGTGGGTTGGTTCTTCTGGGCCAGCTTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCATTAAAAACATCTaGTGGAGCAGCAGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRSIKNI*WSSSCS
Trigger: GGAACAGCTGCTGCTCCACAAGATGTTTTTAATGCT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp TCCAGGAGAGGGGAAGTGCCAATGTCTCCCGGGACAGAAACATTCCTCCATCAATGCGTACCCAAGATGTaGAACTTCCGAAATCCTTTA +
Preference number: 5 (lower is better)
Translates to: SRRGEVPMSPGTETFLHQCVPKM*NFRNPL
Trigger: TAAAGGATTTCGGAAGTTCAACATCTTGGGTACGCA...TTGATGGAGGAATGTTTCTGTCCCGGGAGACATTGGCACTTCCCCTCTCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp TTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAATGTGATGCCTGGCTGCTGGTCCTaGAGCAGAGCGCGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: FLIREISTFYQQCSANVMPGCWS*SRARSR
Trigger: GCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAGG...CATCACATTTGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CAA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGGAAATCAACTCAGTCTaGATGTATCCAGTTCGCTTA +
Preference number: 5 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQEINSV*MYPVRL
Trigger: TAAGCGAACTGGATACATCAAGACTGAGTTGATTTC...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCCTCTATGCACATGACTaGATCCTTCACATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRLYAHD*ILHISD
Trigger: GTCAGAAATGTGAAGGATCAAGTCATGTGCATAGAG...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAATTCTTCTAGGGTCTaGATTTCCTGCTCTATGCAC +
Preference number: 5 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRNSSRV*ISCSMH
Trigger: GTGCATAGAGCAGGAAATCAAGACCCTAGAAGAATT...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp TTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCAGCCAGTTCTCGTTCACATCTTaGTCAAATGAGACTTTCACT +
Preference number: 5 (lower is better)
Translates to: LGKQAMSHEPVQSMDRSQFSFTS*SNETFT
Trigger: AGTGAAAGTCTCATTTGACAAAGATGTGAACGAGAA...CTGGCTGCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTGCGTACCCAAGATGTaGAACTTCCGAAATCCTTTA +
Preference number: 5 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRCVPKM*NFRNPL
Trigger: TAAAGGATTTCGGAAGTTCAACATCTTGGGTACGCA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTTTTCTGTTCCTTCAGTaGCAGGTGTCGGAACTCAGC +
Preference number: 5 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSFLFLQ*QVSELS
Trigger: GCTGAGTTCCGACACCTGCAACTGAAGGAACAGAAA...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp TTTCTTCCCACTCACATGAAGGATGCCCACTATAGTTTGATAGAGCATTGGATCGCGCGTTCTCGCTCCTaGCTGATGAAGCCCATAATG +
Preference number: 5 (lower is better)
Translates to: FLPTHMKDAHYSLIEHWIARSRS*LMKPIM
Trigger: CATTATGGGCTTCATCAGCAAGGAGCGAGAACGCGC...GATCCAATGCTCTATCAAACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CAA 90 bp TTTCCAGCTTTGTCTGATGCCTCCCTGAGGCAGACAGATGCCACAGGTTTGTTCTGGTCTTTGTCAATATaGGGGTACAGATACTTCAGG +
Preference number: 5 (lower is better)
Translates to: FPALSDASLRQTDATGLFWSLSI*GYRYFR
Trigger: CCTGAAGTATCTGTACCCCAATATTGACAAAGACCA...GAACAAACCTGTGGCATCTGTCTGCCTCAGGGAGGCATCAGACAAAGCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070968.14
ENSMUST00000189244.7
CDS-3UTR CAA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTGGTCTTTGTCAATATaGGGGTACAGATACTTCAGG +
Preference number: 5 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRWSLSI*GYRYFR
Trigger: CCTGAAGTATCTGTACCCCAATATTGACAAAGACCA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp TGTGAAAGCTGGCCCAGAAGAACCAACCCACGACCAGAACCATCAGGCTGTGATGAAATCAACTCAGTCTaGATGTATCCAGTTCGCTTA +
Preference number: 5 (lower is better)
Translates to: CESWPRRTNPRPEPSGCDEINSV*MYPVRL
Trigger: TAAGCGAACTGGATACATCAAGACTGAGTTGATTTC...ATCACAGCCTGATGGTTCTGGTCGTGGGTTGGTTCTTCTGGGCCAGCTTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CAA 90 bp AATTCGGGGCCCACTATCCGGGACATCTCATCAAACTCCTCTGGAGACATGGGAGAAATCAACTCAGTCTaGATGTATCCAGTTCGCTTA +
Preference number: 5 (lower is better)
Translates to: NSGPTIRDISSNSSGDMGEINSV*MYPVRL
Trigger: TAAGCGAACTGGATACATCAAGACTGAGTTGATTTC...TCCCATGTCTCCAGAGGAGTTTGATGAGATGTCCCGGATAGTGGGCCCCGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189336.2
CDS CCA 90 bp AGTTCGCTTAGGGTCGTCAAGCTCCATCGGTTCTGGTGCTTCCTTTaGTCTGGAATAATACTTCCCAAAGGCGTGGTCTTTGTCAATATT +
Preference number: 5 (lower is better)
Translates to: SSLRVVKLHRFWCFL*SGIILPKGVVFVNI
Trigger: AATATTGACAAAGACCACGCCTTTGGGAAGTATTATTCCAGACCAAAGGAAGCACCAGAACCGATGGAGCTTGACGACCCTAAGCGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp CTTCATTCCACAGTAGTCTCCAAGCAGTCAATGGAGTCCACTTTAAGCTCTGCCAGCATTAAAAACATCTaGTGGAGCAGCAGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: LHSTVVSKQSMESTLSSASIKNI*WSSSCS
Trigger: GGAACAGCTGCTGCTCCACAAGATGTTTTTAATGCT...GGCAGAGCTTAAAGTGGACTCCATTGACTGCTTGGAGACTACTGTGGAATGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070968.14
CDS CCA 90 bp TTGGTCTGGAATAATACTTCCCAAAGGCGTGGTCTTTGTCAATATTaGGGTACAGATACTTCAGGGGATTCTCTGGTATGTTCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: LVWNNTSQRRGLCQY*GTDTSGDSLVCSRQ
Trigger: CTGCCGAGAACATACCAGAGAATCCCCTGAAGTATCTGTACCCCAATATTGACAAAGACCACGCCTTTGGGAAGTATTATTCCAGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp GTTACATTGGGAAAGCAAGCCATGAGCCATGAGCCAGTGCAATCAATGGACCGCTTCTCGTTCACATCTTaGTCAAATGAGACTTTCACT +
Preference number: 5 (lower is better)
Translates to: VTLGKQAMSHEPVQSMDRFSFTS*SNETFT
Trigger: AGTGAAAGTCTCATTTGACAAAGATGTGAACGAGAA...GCGGTCCATTGATTGCACTGGCTCATGGCTCATGGCTTGCTTTCCCAATGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000186574.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATGCTGCCAGACTTCCGTaGGTGGATTCTTCCATGTTC +
Preference number: 5 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNAARLP*VDSSMF
Trigger: GAACATGGAAGAATCCACCAACGGAAGTCTGGCAGC...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp AAGCTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAAGCTGCCAGACTTCCGTaGGTGGATTCTTCCATGTTC +
Preference number: 5 (lower is better)
Translates to: KLAPLMDVQRQFYSIHDQAARLP*VDSSMF
Trigger: GAACATGGAAGAATCCACCAACGGAAGTCTGGCAGC...TTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp TTGAGGTCTATGCAGATAAGGCTGCTCCACAGGGTTCTACATGAAGGCTACATCTGGTCTTTGTCAATATaGGGGTACAGATACTTCAGG +
Preference number: 5 (lower is better)
Translates to: LRSMQIRLLHRVLHEGYIWSLSI*GYRYFR
Trigger: CCTGAAGTATCTGTACCCCAATATTGACAAAGACCA...GATGTAGCCTTCATGTAGAACCCTGTGGAGCAGCCTTATCTGCATAGACCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189336.2
CDS-3UTR CAA 90 bp CAGACCATTACTAAAGTGACCGTTCTCCTCACCTTGCCCCAAATACTCGCACTCGAAATCAACTCAGTCTaGATGTATCCAGTTCGCTTA +
Preference number: 5 (lower is better)
Translates to: QTITKVTVLLTLPQILALEINSV*MYPVRL
Trigger: TAAGCGAACTGGATACATCAAGACTGAGTTGATTTC...GAGTGCGAGTATTTGGGGCAAGGTGAGGAGAACGGTCACTTTAGTAATGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS GCA 90 bp TGGAAGTTATCCTGGAGATTACGCTTGCTTTTCCGTATGTTGTGCTaGAACAAGAAATTATTCTCCAGAGAAAAGCGGCTGTACTGGTCG +
Preference number: 5 (lower is better)
Translates to: WKLSWRLRLLFRMLC*NKKLFSREKRLYWS
Trigger: CGACCAGTACAGCCGCTTTTCTCTGGAGAATAATTTCTTGTTGCAGCACAACATACGGAAAAGCAAGCGTAATCTCCAGGATAACTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000188681.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp TTCACCTTCAGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAAATGGTGAACCAGCTTaGCAGCTGATCCAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: FTFSKMHEVLQSNRFLIRNGEPA*QLIQAG
Trigger: GCCTGCCTGGATCAGCTGCAAAGCTGGTTCACCATT...TCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACTGAAGGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS CCA 90 bp GTGGTCTTTGTCAATATTGGGGTACAGATACTTCAGGGGATTCTCTaGTATGTTCTCGGCAGCCATGACTTTGTAGTTGCGAATAATATC +
Preference number: 5 (lower is better)
Translates to: VVFVNIGVQILQGIL*YVLGSHDFVVANNI
Trigger: GATATTATTCGCAACTACAAAGTCATGGCTGCCGAGAACATACCAGAGAATCCCCTGAAGTATCTGTACCCCAATATTGACAAAGACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAACCAACAGTCTCAGCTaGACAGTGAACTGTACCCCA +
Preference number: 5 (lower is better)
Translates to: SNRFLIREISTFYQQCSATNSLS*TVNCTP
Trigger: TGGGGTACAGTTCACTGTCAAGCTGAGACTGTTGGT...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp AGTAAGGAGCACGGTTGTTTTCTTCCCACTCACATGAAGGATGCCCACTATAGTTTCTCGTTCACATCTTaGTCAAATGAGACTTTCACT +
Preference number: 5 (lower is better)
Translates to: SKEHGCFLPTHMKDAHYSFSFTS*SNETFT
Trigger: AGTGAAAGTCTCATTTGACAAAGATGTGAACGAGAA...ACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAAACAACCGTGCTCCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp TTTCTTCCCACTCACATGAAGGATGCCCACTATAGTTTGATAGAGCATTGGATCTGCGTACCCAAGATGTaGAACTTCCGAAATCCTTTA +
Preference number: 5 (lower is better)
Translates to: FLPTHMKDAHYSLIEHWICVPKM*NFRNPL
Trigger: TAAAGGATTTCGGAAGTTCAACATCTTGGGTACGCA...GATCCAATGCTCTATCAAACTATAGTGGGCATCCTTCATGTGAGTGGGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATCTCTATGCACATGACTaGATCCTTCACATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNLYAHD*ILHISD
Trigger: GTCAGAAATGTGAAGGATCAAGTCATGTGCATAGAG...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp AAGCTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAAAATTCTTCTAGGGTCTaGATTTCCTGCTCTATGCAC +
Preference number: 5 (lower is better)
Translates to: KLAPLMDVQRQFYSIHDQNSSRV*ISCSMH
Trigger: GTGCATAGAGCAGGAAATCAAGACCCTAGAAGAATT...TTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAGCATTAAAAACATCTaGTGGAGCAGCAGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: SNRFLIREISTFYQQCSASIKNI*WSSSCS
Trigger: GGAACAGCTGCTGCTCCACAAGATGTTTTTAATGCT...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp AGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCTTTCTGTTCCTTCAGTaGCAGGTGTCGGAACTCAGC +
Preference number: 5 (lower is better)
Translates to: SKMHEVLQSNRFLIREISFLFLQ*QVSELS
Trigger: GCTGAGTTCCGACACCTGCAACTGAAGGAACAGAAA...GGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp AAGCTGGCCCCCTTAATGGATGTGCAAAGACAATTTTATTCAATCCATGACCAATGGTCTTTGTCAATATaGGGGTACAGATACTTCAGG +
Preference number: 5 (lower is better)
Translates to: KLAPLMDVQRQFYSIHDQWSLSI*GYRYFR
Trigger: CCTGAAGTATCTGTACCCCAATATTGACAAAGACCA...TTGGTCATGGATTGAATAAAATTGTCTTTGCACATCCATTAAGGGGGCCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
CDS-3UTR CAA 90 bp AGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAGTTCTGGTGCTTCCTTaGGTCTGGAATAATACTTCC +
Preference number: 5 (lower is better)
Translates to: SNRFLIREISTFYQQCSAVLVLP*VWNNTS
Trigger: GGAAGTATTATTCCAGACCAAAGGAAGCACCAGAAC...TGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CAA 90 bp GTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGGTTCTGGTGCTTCCTTaGGTCTGGAATAATACTTCC +
Preference number: 5 (lower is better)
Translates to: VLQSNRFLIREISTFYQQVLVLP*VWNNTS
Trigger: GGAAGTATTATTCCAGACCAAAGGAAGCACCAGAAC...CTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CAA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCGTTCTGGTGCTTCCTTaGGTCTGGAATAATACTTCC +
Preference number: 5 (lower is better)
Translates to: LQSNRFLIREISTFYQQCVLVLP*VWNNTS
Trigger: GGAAGTATTATTCCAGACCAAAGGAAGCACCAGAAC...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS TCA 90 bp TTTTGGTCGCTCTTCGCCACACCATTGGCTTCACCTTCTCTGTTCTaGGAGGTTTTGCATTTAAAGTCATATTCATCTTGTAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: FWSLFATPLASPSLF*EVLHLKSYSSCNSS
Trigger: AGAAGAATTACAAGATGAATATGACTTTAAATGCAAAACCTCTCAGAACAGAGAAGGTGAAGCCAATGGTGTGGCGAAGAGCGACCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS-3UTR CAA 90 bp CTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCAATTCTTCTAGGGTCTaGATTTCCTGCTCTATGCAC +
Preference number: 5 (lower is better)
Translates to: LQSNRFLIREISTFYQQCNSSRV*ISCSMH
Trigger: GTGCATAGAGCAGGAAATCAAGACCCTAGAAGAATT...GCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp GTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGAATTCTTCTAGGGTCTaGATTTCCTGCTCTATGCAC +
Preference number: 5 (lower is better)
Translates to: VLQSNRFLIREISTFYQQNSSRV*ISCSMH
Trigger: GTGCATAGAGCAGGAAATCAAGACCCTAGAAGAATT...CTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp TTCACCTTCAGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGTTCTGGTGCTTCCTTaGGTCTGGAATAATACTTCC +
Preference number: 5 (lower is better)
Translates to: FTFSKMHEVLQSNRFLIRVLVLP*VWNNTS
Trigger: GGAAGTATTATTCCAGACCAAAGGAAGCACCAGAAC...TCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACTGAAGGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CAA 90 bp GATACTCATATTTGGCTAAGGATTCAAGAAGTCACTGCTTTCTCCAAGTTTATGCTCTATGCACATGACTaGATCCTTCACATTTCTGAC +
Preference number: 5 (lower is better)
Translates to: DTHIWLRIQEVTAFSKFMLYAHD*ILHISD
Trigger: GTCAGAAATGTGAAGGATCAAGTCATGTGCATAGAG...CATAAACTTGGAGAAAGCAGTGACTTCTTGAATCCTTAGCCAAATATGAGTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp ATAGGGAGTTCTTTAAAGTTATCTCACCAGGCATTGGTGGTGCACACCTTTAATTTCTCGTTCACATCTTaGTCAAATGAGACTTTCACT +
Preference number: 5 (lower is better)
Translates to: IGSSLKLSHQALVVHTFNFSFTS*SNETFT
Trigger: AGTGAAAGTCTCATTTGACAAAGATGTGAACGAGAA...ATTAAAGGTGTGCACCACCAATGCCTGGTGAGATAACTTTAAAGAACTCCCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
CDS-3UTR CAA 90 bp TTTCTAATTAGAGAAATATCCACTTTCTACCAGCAGTGCTCAGCAAATGTGATGTGGTCTTTGTCAATATaGGGGTACAGATACTTCAGG +
Preference number: 5 (lower is better)
Translates to: FLIREISTFYQQCSANVMWSLSI*GYRYFR
Trigger: CCTGAAGTATCTGTACCCCAATATTGACAAAGACCA...CATCACATTTGCTGAGCACTGCTGGTAGAAAGTGGATATTTCTCTAATTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CAA 90 bp AGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATATCCGTTCTGGTGCTTCCTTaGGTCTGGAATAATACTTCC +
Preference number: 5 (lower is better)
Translates to: SKMHEVLQSNRFLIREISVLVLP*VWNNTS
Trigger: GGAAGTATTATTCCAGACCAAAGGAAGCACCAGAAC...GGATATTTCTCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS-3UTR CAA 90 bp TTCACCTTCAGTAAGATGCATGAAGTCCTTCAGAGTAACAGGTTTCTAATTAGAGAAATCAACTCAGTCTaGATGTATCCAGTTCGCTTA +
Preference number: 5 (lower is better)
Translates to: FTFSKMHEVLQSNRFLIREINSV*MYPVRL
Trigger: TAAGCGAACTGGATACATCAAGACTGAGTTGATTTC...TCTAATTAGAAACCTGTTACTCTGAAGGACTTCATGCATCTTACTGAAGGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
CDS GCA 72 bp GCAGCTGATCCAGGCAGGCGTTGGGCGGTCCCCCGATaGAGGCGCTCTGCTGCCTTCGCTTCCACTCCACGA +
Preference number: 6 (lower is better)
Translates to: AADPGRRWAVPR*RRSAAFASTPR
Trigger: TCGTGGAGTGGAAGCGAAGGCAGCAGAGCGCCTGCATCGGGGGACCGCCCAACGCCTGCCTGGATCAGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CCA 72 bp CCCCAGTCTTCAAGACCAGGGGCCTCTGCGGGTGAGTaGGCATGCACGGCTGTCGTTCTACCACGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: PQSSRPGASAGE*ACTAVVLPRRS
Trigger: GCTCCTTCGTGGTAGAACGACAGCCGTGCATGCCCACTCACCCGCAGAGGCCCCTGGTCTTGAAGACTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CAA 90 bp CTGACGGATCTGCTGCAGGGTCTCTGCAACAATGGTGAACCAGCTTaGCAGCTGATCCAGGCAGGCGTTGGGCGGTCCCCCGATGCAGGC +
Preference number: 6 (lower is better)
Translates to: LTDLLQGLCNNGEPA*QLIQAGVGRSPDAG
Trigger: GCCTGCATCGGGGGACCGCCCAACGCCTGCCTGGATCAGCTGCAAAGCTGGTTCACCATTGTTGCAGAGACCCTGCAGCAGATCCGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS TCA 72 bp TCAGGGCCAGCATTAGGGCCTCCGACTCCGCCAGCCTaGGATGACAGATGCGCACCACCATGCTGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: SGPALGPPTPPA*DDRCAPPCCCL
Trigger: CAGACAGCAGCATGGTGGTGCGCATCTGTCATCTCAGGCTGGCGGAGTCGGAGGCCCTAATGCTGGCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189244.7
CDS CAA 72 bp CTGCTGCAGGGTCTCTGCAACAATGGTGAACCAGCTTaGCAGCTGATCCAGGCAGGCGTTGGGCGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: LLQGLCNNGEPA*QLIQAGVGRSP
Trigger: GGGGGACCGCCCAACGCCTGCCTGGATCAGCTGCAAAGCTGGTTCACCATTGTTGCAGAGACCCTGCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS GCA 72 bp TCTTCAAGACCAGGGGCCTCTGCGGGTGAGTGGGCATaGACGGCTGTCGTTCTACCACGAAGGAGCTCTGAA +
Preference number: 6 (lower is better)
Translates to: SSRPGASAGEWA*TAVVLPRRSSE
Trigger: TTCAGAGCTCCTTCGTGGTAGAACGACAGCCGTGCATGCCCACTCACCCGCAGAGGCCCCTGGTCTTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CCA 72 bp GGTCGTCCAGCTGTGAGAGGAGGTCATGGAAGCGGATaGTCGCAAACGAGACATCATAGGCAGCGTGCTCCC +
Preference number: 6 (lower is better)
Translates to: GRPAVRGGHGSG*SQTRHHRQRAP
Trigger: GGGAGCACGCTGCCTATGATGTCTCGTTTGCGACCATCCGCTTCCATGACCTCCTCTCACAGCTGGACGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000188681.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CCA 72 bp GGCTCCACGGCATGGAAGTCAGGTTCACCTCCGTTCTaGGACCGTTCCACCCATGTGAATGTGATGGCCCCT +
Preference number: 6 (lower is better)
Translates to: GSTAWKSGSPPF*DRSTHVNVMAP
Trigger: AGGGGCCATCACATTCACATGGGTGGAACGGTCCCAGAACGGAGGTGAACCTGACTTCCATGCCGTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS TCA 72 bp GCTGACGGATCTGCTGCAGGGTCTCTGCAACAATGGTaGACCAGCTTTGCAGCTGATCCAGGCAGGCGTTGG +
Preference number: 6 (lower is better)
Translates to: ADGSAAGSLQQW*TSFAADPGRRW
Trigger: CCAACGCCTGCCTGGATCAGCTGCAAAGCTGGTTCACCATTGTTGCAGAGACCCTGCAGCAGATCCGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS TCA 72 bp CTCCAGAGAAAAGCGGCTGTACTGGTCGTCCAGCTGTaGGAGGAGGTCATGGAAGCGGATGGTCGCAAACGA +
Preference number: 6 (lower is better)
Translates to: LQRKAAVLVVQL*EEVMEADGRKR
Trigger: TCGTTTGCGACCATCCGCTTCCATGACCTCCTCTCACAGCTGGACGACCAGTACAGCCGCTTTTCTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000188681.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CAA 72 bp CTGAATCTAAGCAGGAACGTCCCTGGCTGCTGGTCCTaGAGCAGAGCGCGTTCTCGCTCCTTGCTGATGAAG +
Preference number: 6 (lower is better)
Translates to: LNLSRNVPGCWS*SRARSRSLLMK
Trigger: CTTCATCAGCAAGGAGCGAGAACGCGCTCTGCTCAAGGACCAGCAGCCAGGGACGTTCCTGCTTAGATTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS TCA 72 bp GGCATGCACGGCTGTCGTTCTACCACGAAGGAGCTCTaGATGAGCTGCTGGAAGAGGAGGAAGGTTCGATCT +
Preference number: 6 (lower is better)
Translates to: GMHGCRSTTKEL*MSCWKRRKVRS
Trigger: AGATCGAACCTTCCTCCTCTTCCAGCAGCTCATTCAGAGCTCCTTCGTGGTAGAACGACAGCCGTGCATGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS TCA 72 bp TGCACGGCTGTCGTTCTACCACGAAGGAGCTCTGAATaGGCTGCTGGAAGAGGAGGAAGGTTCGATCTGACA +
Preference number: 6 (lower is better)
Translates to: CTAVVLPRRSSE*AAGRGGRFDLT
Trigger: TGTCAGATCGAACCTTCCTCCTCTTCCAGCAGCTCATTCAGAGCTCCTTCGTGGTAGAACGACAGCCGTGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CCA 72 bp AGGAAGAGAGGTGGTCTCCAGGTCAATCACCAAGCCTaGCTGGCACAACTGGGTTTCAAAGCTAAGAGAGTG +
Preference number: 6 (lower is better)
Translates to: RKRGGLQVNHQA*LAQLGFKAKRV
Trigger: CACTCTCTTAGCTTTGAAACCCAGTTGTGCCAGCCAGGCTTGGTGATTGACCTGGAGACCACCTCTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000070968.14
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CAA 90 bp AGGCCCCTCATTAGTTCTGTTCCCAGCGTTTTTCTGTTCCTTCAGTaGCAGGTGTCGGAACTCAGCTGCCAGACTTCCGTTGGTGGATTC +
Preference number: 6 (lower is better)
Translates to: RPLISSVPSVFLFLQ*QVSELSCQTSVGGF
Trigger: GAATCCACCAACGGAAGTCTGGCAGCTGAGTTCCGACACCTGCAACTGAAGGAACAGAAAAACGCTGGGAACAGAACTAATGAGGGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS TCA 72 bp ACGTTGGAGATCACCACGACAGGAAGAGAGGTGGTCTaGAAGGGAACAAAGACCTCCAGGTCAATCACCAAG +
Preference number: 6 (lower is better)
Translates to: TLEITTTGREVV*KGTKTSRSITK
Trigger: CTTGGTGATTGACCTGGAGGTCTTTGTTCCCTTTCAGACCACCTCTCTTCCTGTCGTGGTGATCTCCAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186057.7
CDS GCA 72 bp CTTTTTAAGCTGCTGACGGATCTGCTGCAGGGTCTCTaGAACAATGGTGAACCAGCTTTGCAGCTGATCCAG +
Preference number: 6 (lower is better)
Translates to: LFKLLTDLLQGL*NNGEPALQLIQ
Trigger: CTGGATCAGCTGCAAAGCTGGTTCACCATTGTTGCAGAGACCCTGCAGCAGATCCGTCAGCAGCTTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS GCA 72 bp AGTTCGCTTAGGGTCGTCAAGCTCCATCGGTTCTGGTaGTTCCTTTGGTCTGGAATAATACTTCCCAAAGGC +
Preference number: 6 (lower is better)
Translates to: SSLRVVKLHRFW*FLWSGIILPKG
Trigger: GCCTTTGGGAAGTATTATTCCAGACCAAAGGAAGCACCAGAACCGATGGAGCTTGACGACCCTAAGCGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CCA 72 bp AACAAGAAATTATTCTCCAGAGAAAAGCGGCTGTACTaGTCGTCCAGCTGTGAGAGGAGGTCATGGAAGCGG +
Preference number: 6 (lower is better)
Translates to: NKKLFSREKRLY*SSSCERRSWKR
Trigger: CCGCTTCCATGACCTCCTCTCACAGCTGGACGACCAGTACAGCCGCTTTTCTCTGGAGAATAATTTCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000188681.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS TCA 72 bp AATTTCTGTTCCAACTCCTCCAGCTTTTTAAGCTGCTaGCGGATCTGCTGCAGGGTCTCTGCAACAATGGTG +
Preference number: 6 (lower is better)
Translates to: NFCSNSSSFLSC*RICCRVSATMV
Trigger: CACCATTGTTGCAGAGACCCTGCAGCAGATCCGTCAGCAGCTTAAAAAGCTGGAGGAGTTGGAACAGAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS GCA 72 bp CCCATAATGCACCCATCATTCCAGAGGCACAGCAGGTaGTTCTTAATGAGCTCTAGGATGGTGTCAATCCAA +
Preference number: 6 (lower is better)
Translates to: PIMHPSFQRHSR*FLMSSRMVSIQ
Trigger: TTGGATTGACACCATCCTAGAGCTCATTAAGAAGCACCTGCTGTGCCTCTGGAATGATGGGTGCATTATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CCA 72 bp GCTGTTCCTGTTTTTGGTCGCTCTTCGCCACACCATTaGCTTCACCTTCTCTGTTCTGAGAGGTTTTGCATT +
Preference number: 6 (lower is better)
Translates to: AVPVFGRSSPHH*LHLLCSERFCI
Trigger: AATGCAAAACCTCTCAGAACAGAGAAGGTGAAGCCAATGGTGTGGCGAAGAGCGACCAAAAACAGGAACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CCA 72 bp AAAAACATCTTGTGGAGCAGCAGCTGTTCCTGTTTTTaGTCGCTCTTCGCCACACCATTGGCTTCACCTTCT +
Preference number: 6 (lower is better)
Translates to: KNILWSSSCSCF*SLFATPLASPS
Trigger: AGAAGGTGAAGCCAATGGTGTGGCGAAGAGCGACCAAAAACAGGAACAGCTGCTGCTCCACAAGATGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CCA 72 bp CGTCAAGCTCCATCGGTTCTGGTGCTTCCTTTGGTCTaGAATAATACTTCCCAAAGGCGTGGTCTTTGTCAA +
Preference number: 6 (lower is better)
Translates to: RQAPSVLVLPLV*NNTSQRRGLCQ
Trigger: TTGACAAAGACCACGCCTTTGGGAAGTATTATTCCAGACCAAAGGAAGCACCAGAACCGATGGAGCTTGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CCA 72 bp GTCAATATTGGGGTACAGATACTTCAGGGGATTCTCTaGTATGTTCTCGGCAGCCATGACTTTGTAGTTGCG +
Preference number: 6 (lower is better)
Translates to: VNIGVQILQGIL*YVLGSHDFVVA
Trigger: CGCAACTACAAAGTCATGGCTGCCGAGAACATACCAGAGAATCCCCTGAAGTATCTGTACCCCAATATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS TCA 72 bp TTCCACTCCACGAGCTCGTCATTAATCAGAGTGTTCTaGGTGAGCTCGATGGAATTCAGCAACTCTCTGATT +
Preference number: 6 (lower is better)
Translates to: FHSTSSSLIRVF*VSSMEFSNSLI
Trigger: AATCAGAGAGTTGCTGAATTCCATCGAGCTCACTCAGAACACTCTGATTAATGACGAGCTCGTGGAGTGGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CAA 72 bp GTTGTAGATGATCATGGACATCTGTACGGGATCTTCTaGGAAGTTATCCTGGAGATTACGCTTGCTTTTCCG +
Preference number: 6 (lower is better)
Translates to: VVDDHGHLYGIF*EVILEITLAFP
Trigger: CGGAAAAGCAAGCGTAATCTCCAGGATAACTTCCAAGAAGATCCCGTACAGATGTCCATGATCATCTACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000188681.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CAA 90 bp CTTCAGACAGTTGTAGATGATCATGGACATCTGTACGGGATCTTCTaGGAAGTTATCCTGGAGATTACGCTTGCTTTTCCGTATGTTGTG +
Preference number: 6 (lower is better)
Translates to: LQTVVDDHGHLYGIF*EVILEITLAFPYVV
Trigger: CACAACATACGGAAAAGCAAGCGTAATCTCCAGGATAACTTCCAAGAAGATCCCGTACAGATGTCCATGATCATCTACAACTGTCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000188681.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS GCA 72 bp CGGGATCTTCTTGGAAGTTATCCTGGAGATTACGCTTaGTTTTCCGTATGTTGTGCTGCAACAAGAAATTAT +
Preference number: 6 (lower is better)
Translates to: RDLLGSYPGDYA*FSVCCAATRNY
Trigger: ATAATTTCTTGTTGCAGCACAACATACGGAAAAGCAAGCGTAATCTCCAGGATAACTTCCAAGAAGATCCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000188681.7
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CCA 72 bp AATAATACTTCCCAAAGGCGTGGTCTTTGTCAATATTaGGGTACAGATACTTCAGGGGATTCTCTGGTATGT +
Preference number: 6 (lower is better)
Translates to: NNTSQRRGLCQY*GTDTSGDSLVC
Trigger: ACATACCAGAGAATCCCCTGAAGTATCTGTACCCCAATATTGACAAAGACCACGCCTTTGGGAAGTATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000189244.7
ENSMUST00000189336.2
ENSMUST00000189347.7
ENSMUST00000191435.7
CDS CAA 72 bp AAGTTATCCTGGAGATTACGCTTGCTTTTCCGTATGTaGTGCTGCAACAAGAAATTATTCTCCAGAGAAAAG +
Preference number: 6 (lower is better)
Translates to: KLSWRLRLLFRM*CCNKKLFSREK
Trigger: CTTTTCTCTGGAGAATAATTTCTTGTTGCAGCACAACATACGGAAAAGCAAGCGTAATCTCCAGGATAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000070968.14
ENSMUST00000186057.7
ENSMUST00000186574.7
ENSMUST00000186857.7
ENSMUST00000188681.7
ENSMUST00000189347.7
ENSMUST00000191435.7