RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STARD8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031216

Ensembl transcript IDs: ENSMUST00000036606.14, ENSMUST00000149999.8

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAATaGGCTATTTCACTTGTATCTATGGCCATGAGTGGCCAAAGGCTG +
Preference number: 1 (lower is better)
Translates to: FLLPLSALAWPVSWE*AISLVSMAMSGQRL
Trigger: CAGCCTTTGGCCACTCATGGCCATAGATACAAGTGAAATAGCTCATTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR GCA 90 bp CTCATATTCAAACTCAAAAGAACCCTAGCACCAAATAAGATGGCCTaGCTACTTGGTATGGCAGAGAGCCCAGGCTGTCCAAGGCTCTCC +
Preference number: 1 (lower is better)
Translates to: LIFKLKRTLAPNKMA*LLGMAESPGCPRLS
Trigger: GGAGAGCCTTGGACAGCCTGGGCTCTCTGCCATACCAAGTAGGCAGGCCATCTTATTTGGTGCTAGGGTTCTTTTGAGTTTGAATATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CCA 90 bp TTCCCCTGCTGGGCCTCCAGATACAGCAGCGTCTTCTTGGTCAGATaGACAGCAATGATCTTCTTGCCACTAACAAGATTCTCTTCGCTT +
Preference number: 1 (lower is better)
Translates to: FPCWASRYSSVFLVR*TAMIFLPLTRFSSL
Trigger: AAGCGAAGAGAATCTTGTTAGTGGCAAGAAGATCATTGCTGTCCATCTGACCAAGAAGACGCTGCTGTATCTGGAGGCCCAGCAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR TCA 90 bp ATCTCATTACAGATGGTTGTGAACCACCCTGCGATTGCTGGGAATTaGACTTTTAGGTCCTCTGGAAGAGCAGCCACTGCTCTTAACCAC +
Preference number: 1 (lower is better)
Translates to: ISLQMVVNHPAIAGN*TFRSSGRAATALNH
Trigger: GTGGTTAAGAGCAGTGGCTGCTCTTCCAGAGGACCTAAAAGTTCAATTCCCAGCAATCGCAGGGTGGTTCACAACCATCTGTAATGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CCA 90 bp AACATAACCACTAGATGGGATAGATCAGGCTGGTATCAGCCAGGATaGCTAAGGTACGCCCTTCTTTGTGTTTTTCTAGGGTGTCTACTC +
Preference number: 1 (lower is better)
Translates to: NITTRWDRSGWYQPG*LRYALLCVFLGCLL
Trigger: GAGTAGACACCCTAGAAAAACACAAAGAAGGGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCATCTAGTGGTTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR TCA 90 bp GCCAAAAGGACTGTTCTTATAGACCACCACTGTAGGCAAAAGGCATaGGGATACATTTGTATTTCTTGCTGCCACTGTCAGCTTTGGCCT +
Preference number: 1 (lower is better)
Translates to: AKRTVLIDHHCRQKA*GYICISCCHCQLWP
Trigger: AGGCCAAAGCTGACAGTGGCAGCAAGAAATACAAATGTATCCTCATGCCTTTTGCCTACAGTGGTGGTCTATAAGAACAGTCCTTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CCA 90 bp TGCTTACCCGATCTGGTGTTCCAGACCTGTATTCAGGATCAATGTTaGCCCCAAAGGCAGGATCAGACCTCATATTCAAACTCAAAAGAA +
Preference number: 1 (lower is better)
Translates to: CLPDLVFQTCIQDQC*PQRQDQTSYSNSKE
Trigger: TTCTTTTGAGTTTGAATATGAGGTCTGATCCTGCCTTTGGGGCCAACATTGATCCTGAATACAGGTCTGGAACACCAGATCGGGTAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CCA 90 bp CACTGTCAATCTTCAGAAAGTTCAGCATCATGTTCACATATAAAATaGATTGTGGTGGTCATTGTGTCCCCCGTGCTTACCCGATCTGGT +
Preference number: 1 (lower is better)
Translates to: HCQSSESSASCSHIK*IVVVIVSPVLTRSG
Trigger: ACCAGATCGGGTAAGCACGGGGGACACAATGACCACCACAATCCATTTTATATGTGAACATGATGCTGAACTTTCTGAAGATTGACAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CCA 90 bp ACAGTATTTATAGGCACAGACAAAACAGGATTAACATCACAACGATaGCTACAAACCACCACAATCCAGTTTACTCAGCCAAAGACAAAG +
Preference number: 1 (lower is better)
Translates to: TVFIGTDKTGLTSQR*LQTTTIQFTQPKTK
Trigger: CTTTGTCTTTGGCTGAGTAAACTGGATTGTGGTGGTTTGTAGCCATCGTTGTGATGTTAATCCTGTTTTGTCTGTGCCTATAAATACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR-3UTR GCA 90 bp GCTTTATTATTCTGCAGAGGGAACTGCTGCGGCCTGCCCTTCACCTCTCCTCTCTCCACCTTCTTCCCCTaGTGGGCCTCCAGATACAGC +
Preference number: 2 (lower is better)
Translates to: ALLFCRGNCCGLPFTSPLSTFFP*WASRYS
Trigger: GCTGTATCTGGAGGCCCAGCAGGGGAAGAAGGTGGA...GAGAGGAGAGGTGAAGGGCAGGCCGCAGCAGTTCCCTCTGCAGAATAATAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR-3UTR CCA 90 bp AGGGCATCAGATCTCATTACAGATGGTTGTGAACCACCCTGCGATTGCTGGGAAAAGAGGATAGGTAGCTaGGCCACCGAGGCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: RASDLITDGCEPPCDCWEKRIGS*ATEAWL
Trigger: CAGCCAGGCCTCGGTGGCCCAGCTACCTATCCTCTT...TTCCCAGCAATCGCAGGGTGGTTCACAACCATCTGTAATGAGATCTGATGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR-3UTR CCA 90 bp CCCCTGCTGGGCCTCCAGATACAGCAGCGTCTTCTTGGTCAGATGGACAGCAATTCCCACTCATTTCTTTaGTGGCAGACACCTGGCAAT +
Preference number: 2 (lower is better)
Translates to: PLLGLQIQQRLLGQMDSNSHSFL*WQTPGN
Trigger: ATTGCCAGGTGTCTGCCACCAAAGAAATGAGTGGGA...ATTGCTGTCCATCTGACCAAGAAGACGCTGCTGTATCTGGAGGCCCAGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR-3UTR CCA 90 bp TGGGTGGAGGTAGGATACCTACGCCCTCTTCTCTTGTGTGTGTGCAGAGTAGCACACTCATTTCTTTGGTaGCAGACACCTGGCAATGTC +
Preference number: 2 (lower is better)
Translates to: WVEVGYLRPLLLCVCRVAHSFLW*QTPGNV
Trigger: GACATTGCCAGGTGTCTGCCACCAAAGAAATGAGTG...TGCTACTCTGCACACACACAAGAGAAGAGGGCGTAGGTATCCTACCTCCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR-3UTR CCA 90 bp AACATCACAACGATGGCTACAAACCACCACAATCCAGTTTACTCAGCCAAAGACACCTTCTTCCCCTGCTaGGCCTCCAGATACAGCAGC +
Preference number: 2 (lower is better)
Translates to: NITTMATNHHNPVYSAKDTFFPC*ASRYSS
Trigger: GCTGCTGTATCTGGAGGCCCAGCAGGGGAAGAAGGT...GTCTTTGGCTGAGTAAACTGGATTGTGGTGGTTTGTAGCCATCGTTGTGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR-3UTR CCA 90 bp AGGGCATCAGATCTCATTACAGATGGTTGTGAACCACCCTGCGATTGCTGGGAAGGGAGGATGGTTCATTaGTTTCTTGGGCTTGAGGAA +
Preference number: 2 (lower is better)
Translates to: RASDLITDGCEPPCDCWEGRMVH*FLGLEE
Trigger: TTCCTCAAGCCCAAGAAACCAATGAACCATCCTCCC...TTCCCAGCAATCGCAGGGTGGTTCACAACCATCTGTAATGAGATCTGATGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR-3UTR CCA 90 bp GCCACTGCTCTTAACCACTATGCCACCTCTCCAGCCAAAAGGACTGTTCTTATACAAAGTAGGGGAGGATaGTTCATTGGTTTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: ATALNHYATSPAKRTVLIQSRGG*FIGFLG
Trigger: GCCCAAGAAACCAATGAACCATCCTCCCCTACTTTG...TATAAGAACAGTCCTTTTGGCTGGAGAGGTGGCATAGTGGTTAAGAGCAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CAA 90 bp GTGCTTACCCGATCTGGTGTTCCAGACCTGTATTCAGGATCAATGTaGGCCCCAAAGGCAGGATCAGACCTCATATTCAAACTCAAAAGA +
Preference number: 2 (lower is better)
Translates to: VLTRSGVPDLYSGSM*APKAGSDLIFKLKR
Trigger: TCTTTTGAGTTTGAATATGAGGTCTGATCCTGCCTTTGGGGCCAACATTGATCCTGAATACAGGTCTGGAACACCAGATCGGGTAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR-3UTR GCA 90 bp AGGGCATCAGATCTCATTACAGATGGTTGTGAACCACCCTGCGATTGCTGGGAAATTTGTATTTCTTGCTaGCACTGTCAGCTTTGGCCT +
Preference number: 2 (lower is better)
Translates to: RASDLITDGCEPPCDCWEICISC*HCQLWP
Trigger: AGGCCAAAGCTGACAGTGGCAGCAAGAAATACAAAT...TTCCCAGCAATCGCAGGGTGGTTCACAACCATCTGTAATGAGATCTGATGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CAA 90 bp CCACCACAATCCAGTTTACTCAGCCAAAGACAAAGAAAGCACCACTaGGCCTCTGAATGGCTGCTCGGTTTCTATCTGAACAAACATAAC +
Preference number: 2 (lower is better)
Translates to: PPQSSLLSQRQRKHH*ASEWLLGFYLNKHN
Trigger: GTTATGTTTGTTCAGATAGAAACCGAGCAGCCATTCAGAGGCCAAGTGGTGCTTTCTTTGTCTTTGGCTGAGTAAACTGGATTGTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR GCA 72 bp AGCCCAGGCTGTCCAAGGCTCTCCACCTTCTTCCCCTaGTGGGCCTCCAGATACAGCAGCGTCTTCTTGGTC +
Preference number: 3 (lower is better)
Translates to: SPGCPRLSTFFP*WASRYSSVFLV
Trigger: GACCAAGAAGACGCTGCTGTATCTGGAGGCCCAGCAGGGGAAGAAGGTGGAGAGCCTTGGACAGCCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR-3UTR CAA 90 bp CCCCTGCTGGGCCTCCAGATACAGCAGCGTCTTCTTGGTCAGATGGACAGCAATCTACGCCCTCTTCTCTaGTGTGTGTGCAGAGTAGCA +
Preference number: 3 (lower is better)
Translates to: PLLGLQIQQRLLGQMDSNLRPLL*CVCRVA
Trigger: TGCTACTCTGCACACACACAAGAGAAGAGGGCGTAG...ATTGCTGTCCATCTGACCAAGAAGACGCTGCTGTATCTGGAGGCCCAGCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR-3UTR CAA 90 bp GCTTTATTATTCTGCAGAGGGAACTGCTGCGGCCTGCCCTTCACCTCTCCTCTCTACAGCAGCGTCTTCTaGGTCAGATGGACAGCAATG +
Preference number: 3 (lower is better)
Translates to: ALLFCRGNCCGLPFTSPLYSSVF*VRWTAM
Trigger: CATTGCTGTCCATCTGACCAAGAAGACGCTGCTGTA...GAGAGGAGAGGTGAAGGGCAGGCCGCAGCAGTTCCCTCTGCAGAATAATAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR GCA 72 bp TCCAGTCCTGCTTTATTATTCTGCAGAGGGAACTGCTaGGGCCTGCCCTTCACCTCTCCTCTCTCGTTAGAA +
Preference number: 3 (lower is better)
Translates to: SSPALLFCRGNC*GLPFTSPLSLE
Trigger: TTCTAACGAGAGAGGAGAGGTGAAGGGCAGGCCGCAGCAGTTCCCTCTGCAGAATAATAAAGCAGGACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR TCA 72 bp CCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAATaGGCTATTTCACTTGTATCTATGGCCATGAGTGGC +
Preference number: 3 (lower is better)
Translates to: PLSALAWPVSWE*AISLVSMAMSG
Trigger: GCCACTCATGGCCATAGATACAAGTGAAATAGCTCATTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR-3UTR CAA 90 bp GCCACTGCTCTTAACCACTATGCCACCTCTCCAGCCAAAAGGACTGTTCTTATATTCCCACTCATTTCTTaGGTGGCAGACACCTGGCAA +
Preference number: 3 (lower is better)
Translates to: ATALNHYATSPAKRTVLIFPLIS*VADTWQ
Trigger: TTGCCAGGTGTCTGCCACCAAAGAAATGAGTGGGAA...TATAAGAACAGTCCTTTTGGCTGGAGAGGTGGCATAGTGGTTAAGAGCAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CCA 72 bp TGGGCCTCCAGATACAGCAGCGTCTTCTTGGTCAGATaGACAGCAATGATCTTCTTGCCACTAACAAGATTC +
Preference number: 3 (lower is better)
Translates to: WASRYSSVFLVR*TAMIFLPLTRF
Trigger: GAATCTTGTTAGTGGCAAGAAGATCATTGCTGTCCATCTGACCAAGAAGACGCTGCTGTATCTGGAGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR-3UTR CAA 90 bp TGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCCTTCTTTGTACAGCAATGATCTTCTaGCCACTAACAAGATTCTCT +
Preference number: 3 (lower is better)
Translates to: WDRSGWYQPGWLRYALLCTAMIF*PLTRFS
Trigger: AGAGAATCTTGTTAGTGGCAAGAAGATCATTGCTGT...ACAAAGAAGGGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR TCA 72 bp ACCACTTGGCCTCTGAATGGCTGCTCGGTTTCTATCTaGACAAACATAACCACTAGATGGGATAGATCAGGC +
Preference number: 3 (lower is better)
Translates to: TTWPLNGCSVSI*TNITTRWDRSG
Trigger: GCCTGATCTATCCCATCTAGTGGTTATGTTTGTTCAGATAGAAACCGAGCAGCCATTCAGAGGCCAAGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CCA 72 bp GATCTGGTGTTCCAGACCTGTATTCAGGATCAATGTTaGCCCCAAAGGCAGGATCAGACCTCATATTCAAAC +
Preference number: 3 (lower is better)
Translates to: DLVFQTCIQDQC*PQRQDQTSYSN
Trigger: GTTTGAATATGAGGTCTGATCCTGCCTTTGGGGCCAACATTGATCCTGAATACAGGTCTGGAACACCAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CCA 72 bp AGCCAAAGACAAAGAAAGCACCACTTGGCCTCTGAATaGCTGCTCGGTTTCTATCTGAACAAACATAACCAC +
Preference number: 3 (lower is better)
Translates to: SQRQRKHHLASE*LLGFYLNKHNH
Trigger: GTGGTTATGTTTGTTCAGATAGAAACCGAGCAGCCATTCAGAGGCCAAGTGGTGCTTTCTTTGTCTTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR TCA 72 bp ACAGAAGAGGGCATCAGATCTCATTACAGATGGTTGTaGACCACCCTGCGATTGCTGGGAATTGAACTTTTA +
Preference number: 3 (lower is better)
Translates to: TEEGIRSHYRWL*TTLRLLGIELL
Trigger: TAAAAGTTCAATTCCCAGCAATCGCAGGGTGGTTCACAACCATCTGTAATGAGATCTGATGCCCTCTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CCA 72 bp TCTTCAGAAAGTTCAGCATCATGTTCACATATAAAATaGATTGTGGTGGTCATTGTGTCCCCCGTGCTTACC +
Preference number: 3 (lower is better)
Translates to: SSESSASCSHIK*IVVVIVSPVLT
Trigger: GGTAAGCACGGGGGACACAATGACCACCACAATCCATTTTATATGTGAACATGATGCTGAACTTTCTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp ACCACTAGATGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCCGAGGCCCCGACACCTaGGTCACGACGTTCACGGGG +
Preference number: 4 (lower is better)
Translates to: TTRWDRSGWYQPGWLRYARGPDT*VTTFTG
Trigger: CCCCGTGAACGTCGTGACTCAGGTGTCGGGGCCTCG...GGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCATCTAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp CCCCTGCTGGGCCTCCAGATACAGCAGCGTCTTCTTGGTCAGATGGACAGCAATTCAGCGCGGCAAATATaGGTGAGGCGAGAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PLLGLQIQQRLLGQMDSNSARQI*VRRERP
Trigger: GGGCCGCTCTCGCCTCACTCATATTTGCCGCGCTGA...ATTGCTGTCCATCTGACCAAGAAGACGCTGCTGTATCTGGAGGCCCAGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp CTGCCTACTTGGTATGGCAGAGAGCCCAGGCTGTCCAAGGCTCTCCACCTTCTTCAAGCCAGCTCTGTGTaGTGGGGCCCCGGCACATTG +
Preference number: 4 (lower is better)
Translates to: LPTWYGREPRLSKALHLLQASSV*WGPGTL
Trigger: CAATGTGCCGGGGCCCCAGCACACAGAGCTGGCTTG...AAGAAGGTGGAGAGCCTTGGACAGCCTGGGCTCTCTGCCATACCAAGTAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TGGGTGGAGGTAGGATACCTACGCCCTCTTCTCTTGTGTGTGTGCAGAGTAGCATGGCATGGCTGCCTGTaGAACCACAGGAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: WVEVGYLRPLLLCVCRVAWHGCL*NHRSPG
Trigger: GCCGGGGCTCCTGTGGTTCCACAGGCAGCCATGCCA...TGCTACTCTGCACACACACAAGAGAAGAGGGCGTAGGTATCCTACCTCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp ACCACTAGATGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCTCTCACTCAGGTCCCTaGGGCCTGGCCGGCCAACCA +
Preference number: 4 (lower is better)
Translates to: TTRWDRSGWYQPGWLRYASHSGP*GLAGQP
Trigger: TGGTTGGCCGGCCAGGCCCCAGGGACCTGAGTGAGA...GGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCATCTAGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp ACCACTAGATGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCATCCTGGGCCTGAGCTaGAGCCTCAGCCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TTRWDRSGWYQPGWLRYAILGLS*SLSLSL
Trigger: CAGGCTGAGGCTGAGGCTCCAGCTCAGGCCCAGGAT...GGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCATCTAGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp GCTTTATTATTCTGCAGAGGGAACTGCTGCGGCCTGCCCTTCACCTCTCCTCTCATGCAGCACCACGGCTaGAGGGGCAGCCACTTCTGT +
Preference number: 4 (lower is better)
Translates to: ALLFCRGNCCGLPFTSPLMQHHG*RGSHFC
Trigger: ACAGAAGTGGCTGCCCCTCCAGCCGTGGTGCTGCAT...GAGAGGAGAGGTGAAGGGCAGGCCGCAGCAGTTCCCTCTGCAGAATAATAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp ACCACTAGATGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCCGCCTGCGTATAGGCTaGGGATGCCGGAATGTGGCT +
Preference number: 4 (lower is better)
Translates to: TTRWDRSGWYQPGWLRYARLRIG*GCRNVA
Trigger: AGCCACATTCCGGCATCCTCAGCCTATACGCAGGCG...GGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCATCTAGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp GCTTTATTATTCTGCAGAGGGAACTGCTGCGGCCTGCCCTTCACCTCTCCTCTCTCAGGATCCAGGGACTaGGAGACAAGGAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: ALLFCRGNCCGLPFTSPLSGSRD*ETRRHP
Trigger: TGGGTGCCTCCTTGTCTCTCAGTCCCTGGATCCTGA...GAGAGGAGAGGTGAAGGGCAGGCCGCAGCAGTTCCCTCTGCAGAATAATAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp CTCTTGTGTGTGTGCAGAGTAGCATTAGGATACAAGAGGATAGGTAGCTGGGCCCAGGAGGCTAGGGCTTaGTGGGGCCAGCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLCVCRVALGYKRIGSWAQEARA*WGQQGR
Trigger: TCTGCCCTGCTGGCCCCACCAAGCCCTAGCCTCCTG...GGCCCAGCTACCTATCCTCTTGTATCCTAATGCTACTCTGCACACACACAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp CATTTGTATTTCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAAAGGGCTTCCAGCACCTaGGCCCGCAGGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: HLYFLLPLSALAWPVSWERASST*ARRRSS
Trigger: TGAGGACCTCCTGCGGGCCCAGGTGCTGGAAGCCCT...TTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGAAATACAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp AGGGCATCAGATCTCATTACAGATGGTTGTGAACCACCCTGCGATTGCTGGGAAGCTTGCTGGATGCTCTaGGGCAGAGGCTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RASDLITDGCEPPCDCWEACWML*GRGWPV
Trigger: CACAGGCCAGCCTCTGCCTCAGAGCATCCAGCAAGC...TTCCCAGCAATCGCAGGGTGGTTCACAACCATCTGTAATGAGATCTGATGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp GCTTTATTATTCTGCAGAGGGAACTGCTGCGGCCTGCCCTTCACCTCTCCTCTCGCAAGTTGTCGTAAGTaGTGGCATGGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ALLFCRGNCCGLPFTSPLASCRK*WHGCLW
Trigger: CCACAGGCAGCCATGCCAGCACTTACGACAACTTGC...GAGAGGAGAGGTGAAGGGCAGGCCGCAGCAGTTCCCTCTGCAGAATAATAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp CCCCTGCTGGGCCTCCAGATACAGCAGCGTCTTCTTGGTCAGATGGACAGCAATGGACTAAGGAAGGGTTaGTTACTTGGGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: PLLGLQIQQRLLGQMDSNGLRKG*LLGLGT
Trigger: TGTCCCCAGCCCAAGTAACCAACCCTTCCTTAGTCC...ATTGCTGTCCATCTGACCAAGAAGACGCTGCTGTATCTGGAGGCCCAGCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp GCTTTATTATTCTGCAGAGGGAACTGCTGCGGCCTGCCCTTCACCTCTCCTCTCCCTCCACAGACAGGCTaGAGGCAGAAATTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALLFCRGNCCGLPFTSPLPPQTG*RQKLAL
Trigger: CAGAGCCAATTTCTGCCTCCAGCCTGTCTGTGGAGG...GAGAGGAGAGGTGAAGGGCAGGCCGCAGCAGTTCCCTCTGCAGAATAATAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp CTGCCTACTTGGTATGGCAGAGAGCCCAGGCTGTCCAAGGCTCTCCACCTTCTTTTGAGGCTAGGTCGGTaGGAATTCTGGAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LPTWYGREPRLSKALHLLLRLGR*EFWKLC
Trigger: GCACAGCTTCCAGAATTCCCACCGACCTAGCCTCAA...AAGAAGGTGGAGAGCCTTGGACAGCCTGGGCTCTCTGCCATACCAAGTAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp GCCACTGCTCTTAACCACTATGCCACCTCTCCAGCCAAAAGGACTGTTCTTATACAGGGAGCAGCAAGGTaGCAGCTTGCGCCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ATALNHYATSPAKRTVLIQGAAR*QLAPLP
Trigger: TGGCAGCGGCGCAAGCTGCCACCTTGCTGCTCCCTG...TATAAGAACAGTCCTTTTGGCTGGAGAGGTGGCATAGTGGTTAAGAGCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TCAGCATCATGTTCACATATAAAATGGATTGTGGTGGTCATTGTGTCCCCCGTGCTCACCCCAGCCGCCTaGGCCTGCCTCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SASCSHIKWIVVVIVSPVLTPAA*ACLSSA
Trigger: GGCTGAGCTGAGGCAGGCCCAGGCGGCTGGGGTGAG...CACGGGGGACACAATGACCACCACAATCCATTTTATATGTGAACATGATGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp TGGGTGGAGGTAGGATACCTACGCCCTCTTCTCTTGTGTGTGTGCAGAGTAGCAGGGCAGAAGAGCCCATaGGAGACCCACACTTGCTTT +
Preference number: 4 (lower is better)
Translates to: WVEVGYLRPLLLCVCRVAGQKSP*ETHTCF
Trigger: AAAGCAAGTGTGGGTCTCTCATGGGCTCTTCTGCCC...TGCTACTCTGCACACACACAAGAGAAGAGGGCGTAGGTATCCTACCTCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp CTGCCTACTTGGTATGGCAGAGAGCCCAGGCTGTCCAAGGCTCTCCACCTTCTTGCAAGTGCGGAAAGATaGAGCTTTGGTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LPTWYGREPRLSKALHLLASAER*SFGGLF
Trigger: GAAAAGGCCACCAAAGCTTCATCTTTCCGCACTTGC...AAGAAGGTGGAGAGCCTTGGACAGCCTGGGCTCTCTGCCATACCAAGTAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp CTCTTGTGTGTGTGCAGAGTAGCATTAGGATACAAGAGGATAGGTAGCTGGGCCGCCCCAGCACCTACTTaGCTGCCAATCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LLCVCRVALGYKRIGSWAAPAPT*LPICQV
Trigger: CACCTGGCAGATTGGCAGTCAAGTAGGTGCTGGGGC...GGCCCAGCTACCTATCCTCTTGTATCCTAATGCTACTCTGCACACACACAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp TGGGTGGAGGTAGGATACCTACGCCCTCTTCTCTTGTGTGTGTGCAGAGTAGCAGCTCTTGATCCTGGGTaGGGAGCTGTCCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: WVEVGYLRPLLLCVCRVAALDPG*GAVLLG
Trigger: TCCAAGAAGGACAGCTCCTCACCCAGGATCAAGAGC...TGCTACTCTGCACACACACAAGAGAAGAGGGCGTAGGTATCCTACCTCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp AGGGCATCAGATCTCATTACAGATGGTTGTGAACCACCCTGCGATTGCTGGGAACAGGAGAACGGCCCCTaGGGTCAGCGCGGCAAATAT +
Preference number: 4 (lower is better)
Translates to: RASDLITDGCEPPCDCWEQENGP*GQRGKY
Trigger: ATATTTGCCGCGCTGACCTCAGGGGCCGTTCTCCTG...TTCCCAGCAATCGCAGGGTGGTTCACAACCATCTGTAATGAGATCTGATGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp TGGGTGGAGGTAGGATACCTACGCCCTCTTCTCTTGTGTGTGTGCAGAGTAGCACCACACTTGCTTTCCTaGTCAAAGGCCCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WVEVGYLRPLLLCVCRVAPHLLS*SKAQWL
Trigger: CAGCCACTGGGCCTTTGAGCAGGAAAGCAAGTGTGG...TGCTACTCTGCACACACACAAGAGAAGAGGGCGTAGGTATCCTACCTCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp ACCACTAGATGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCCGAAAGATGCCCACCTaGTCTAGGCACTGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: TTRWDRSGWYQPGWLRYARKMPT*SRHWLR
Trigger: ACGAAGCCAGTGCCTAGACCAGGTGGGCATCTTTCG...GGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCATCTAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp GCTTTATTATTCTGCAGAGGGAACTGCTGCGGCCTGCCCTTCACCTCTCCTCTCGGGCAGCCACTTCTGTaGATGCCTTCCACATTCGAA +
Preference number: 4 (lower is better)
Translates to: ALLFCRGNCCGLPFTSPLGQPLL*MPSTFE
Trigger: TTCGAATGTGGAAGGCATCCACAGAAGTGGCTGCCC...GAGAGGAGAGGTGAAGGGCAGGCCGCAGCAGTTCCCTCTGCAGAATAATAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp CATTTGTATTTCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAAGCCTCCCAGGCTTTCTaGGTCTCACCATCTCTGACC +
Preference number: 4 (lower is better)
Translates to: HLYFLLPLSALAWPVSWEASQAF*VSPSLT
Trigger: GGTCAGAGATGGTGAGACTCAGAAAGCCTGGGAGGC...TTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGAAATACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp TCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCCTGGGCCAGGAGGGCTaGGCTCAGCTGCGCTGTATG +
Preference number: 4 (lower is better)
Translates to: SLKASQFIFPLISLVADTLGQEG*AQLRCM
Trigger: CATACAGCGCAGCTGAGCTCAGCCCTCCTGGCCCAG...GGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp TGGGTGGAGGTAGGATACCTACGCCCTCTTCTCTTGTGTGTGTGCAGAGTAGCAGTGCCATGCTGTCAGTaGCATAGTGGTACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: WVEVGYLRPLLLCVCRVAVPCCQ*HSGTAP
Trigger: TGGAGCTGTACCACTATGTCACTGACAGCATGGCAC...TGCTACTCTGCACACACACAAGAGAAGAGGGCGTAGGTATCCTACCTCCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp CATTTGTATTTCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAAAAGTGCTGGCATGGCTaGCTGTGGAACCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: HLYFLLPLSALAWPVSWEKCWHG*LWNHRS
Trigger: GCTCCTGTGGTTCCACAGGCAGCCATGCCAGCACTT...TTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGAAATACAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp CATTTGTATTTCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAACACAGCTCTACCCGTTaGTGTAGCCCCCACACATGC +
Preference number: 4 (lower is better)
Translates to: HLYFLLPLSALAWPVSWEHSSTR*CSPHTC
Trigger: GCATGTGTGGGGGCTACAGCAACGGGTAGAGCTGTG...TTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGAAATACAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp CGATTGCTGGGAATTGAACTTTTAGGTCCTCTGGAAGAGCAGCCACTGCTCTTACGGGGTACTGATGCTTaGAGTCCTGCAGGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: RLLGIELLGPLEEQPLLLRGTDA*SPAGAS
Trigger: AGACGCCCCTGCAGGACTGCAAGCATCAGTACCCCG...TAAGAGCAGTGGCTGCTCTTCCAGAGGACCTAAAAGTTCAATTCCCAGCAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp AGGGCATCAGATCTCATTACAGATGGTTGTGAACCACCCTGCGATTGCTGGGAAGTGGAAGATGGAAGGTaGCAGGCACACCGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: RASDLITDGCEPPCDCWEVEDGR*QAHRQV
Trigger: AACCTGGCGGTGTGCCTGGCACCTTCCATCTTCCAC...TTCCCAGCAATCGCAGGGTGGTTCACAACCATCTGTAATGAGATCTGATGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAATGAGCTATTTACGAAGTTTCCTGCATaGTCTGGTAAGCGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SCCHCQLWPGLCHGNELFTKFPA*SGKRGP
Trigger: GGGGCCTCGCTTACCAGACCATGCAGGAAACTTCGT...AAATAGCTCATTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp CTGCCTACTTGGTATGGCAGAGAGCCCAGGCTGTCCAAGGCTCTCCACCTTCTTATGTCCTGGGGCACCTaGAAAAGTTTCTTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LPTWYGREPRLSKALHLLMSWGT*KSFLQS
Trigger: TGACTGCAAGAAACTTTTCCAGGTGCCCCAGGACAT...AAGAAGGTGGAGAGCCTTGGACAGCCTGGGCTCTCTGCCATACCAAGTAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TCAGCATCATGTTCACATATAAAATGGATTGTGGTGGTCATTGTGTCCCCCGTGGCCAGCTCTGTGTGCTaGGGCCCCGGCACATTGGTC +
Preference number: 4 (lower is better)
Translates to: SASCSHIKWIVVVIVSPVASSVC*GPGTLV
Trigger: GACCAATGTGCCGGGGCCCCAGCACACAGAGCTGGC...CACGGGGGACACAATGACCACCACAATCCATTTTATATGTGAACATGATGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CAA 72 bp TTCCCCTGCTGGGCCTCCAGATACAGCAGCGTCTTCTaGGTCAGATGGACAGCAATGATCTTCTTGCCACTA +
Preference number: 4 (lower is better)
Translates to: FPCWASRYSSVF*VRWTAMIFLPL
Trigger: TAGTGGCAAGAAGATCATTGCTGTCCATCTGACCAAGAAGACGCTGCTGTATCTGGAGGCCCAGCAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp TCAGCATCATGTTCACATATAAAATGGATTGTGGTGGTCATTGTGTCCCCCGTGCCTGTGCGCTGCACATaGATGAGGGGTGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: SASCSHIKWIVVVIVSPVPVRCT*MRGGTP
Trigger: TGGGGTGCCACCCCTCATTCATGTGCAGCGCACAGG...CACGGGGGACACAATGACCACCACAATCCATTTTATATGTGAACATGATGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp ACCACTAGATGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCTCTGAATCCTGGACTTaGCCCCAGACTTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: TTRWDRSGWYQPGWLRYASESWT*PQTCER
Trigger: TCTTTCGCAAGTCTGGGGTCAAGTCCAGGATTCAGA...GGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCATCTAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp TGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCCTTCTTTGTGGAAGCCACGGCAAGTaGGGAAAGATGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: WDRSGWYQPGWLRYALLCGSHGK*GKMKLW
Trigger: CCAAAGCTTCATCTTTCCGCACTTGCCGTGGCTTCC...ACAAAGAAGGGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp ACCACTAGATGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCTGTAGCCCCCACACATaGTCCAGGATGTCATCTAGA +
Preference number: 4 (lower is better)
Translates to: TTRWDRSGWYQPGWLRYACSPHT*SRMSSR
Trigger: TCTAGATGACATCCTGGAGCATGTGTGGGGGCTACA...GGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCATCTAGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp AAACTCAAAAGAACCCTAGCACCAAATAAGATGGCCTGCCTACTTGGTATGGCAGGCAGCTTGCGCCGCTaGCAGCCACTGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: KLKRTLAPNKMACLLGMAGSLRR*QPLFFG
Trigger: CCCAAAGAACAGTGGCTGGCAGCGGCGCAAGCTGCC...TGCCATACCAAGTAGGCAGGCCATCTTATTTGGTGCTAGGGTTCTTTTGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp GTCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACAGCAAGGTGGCAGCTTaGGCCGCTGCCAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: VSKGFSVHIPTHFFGGRHSKVAA*AAASHC
Trigger: ACAGTGGCTGGCAGCGGCGCAAGCTGCCACCTTGCT...GTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp TGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCCTTCTTTGTTATGAACCACATAGCTaGACCACCATGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WDRSGWYQPGWLRYALLCYEPHS*TTMSWG
Trigger: GCCCCAGGACATGGTGGTGCAGCTATGTGGTTCATA...ACAAAGAAGGGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp AAACTCAAAAGAACCCTAGCACCAAATAAGATGGCCTGCCTACTTGGTATGGCAGAGGCTAGGGCTTGGTaGGGCCAGCAGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: KLKRTLAPNKMACLLGMAEARAW*GQQGRR
Trigger: TCTTCTGCCCTGCTGGCCCCACCAAGCCCTAGCCTC...TGCCATACCAAGTAGGCAGGCCATCTTATTTGGTGCTAGGGTTCTTTTGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp GCTTTATTATTCTGCAGAGGGAACTGCTGCGGCCTGCCCTTCACCTCTCCTCTCAAGATGAAGCTTTGGTaGCCTTTTCCGAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: ALLFCRGNCCGLPFTSPLKMKLW*PFPRWQ
Trigger: TTGCCACCTCGGAAAAGGCCACCAAAGCTTCATCTT...GAGAGGAGAGGTGAAGGGCAGGCCGCAGCAGTTCCCTCTGCAGAATAATAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp CTCTTGTGTGTGTGCAGAGTAGCATTAGGATACAAGAGGATAGGTAGCTGGGCCTCCAGGCCTCAGGTCTaGGTACATGGTCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: LLCVCRVALGYKRIGSWASRPQV*VHGLRP
Trigger: TGGTCTCAGACCATGTACCCAGACCTGAGGCCTGGA...GGCCCAGCTACCTATCCTCTTGTATCCTAATGCTACTCTGCACACACACAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAATGAGCTATTTACTTCCTCCTTGACTTaGGTTGGGAACCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SCCHCQLWPGLCHGNELFTSSLT*VGNPLW
Trigger: CCACAGAGGGTTCCCAACCCAAGTCAAGGAGGAAGT...AAATAGCTCATTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp CTGCCTACTTGGTATGGCAGAGAGCCCAGGCTGTCCAAGGCTCTCCACCTTCTTCATCAGCCTCATTCATaGAGTTGCCACTACTGTCAA +
Preference number: 4 (lower is better)
Translates to: LPTWYGREPRLSKALHLLHQPHS*SCHYCQ
Trigger: TTGACAGTAGTGGCAACTCCATGAATGAGGCTGATG...AAGAAGGTGGAGAGCCTTGGACAGCCTGGGCTCTCTGCCATACCAAGTAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp ACCACTAGATGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCATGTGTGATAGGCCTTaGGTGGCAGCCATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: TTRWDRSGWYQPGWLRYAMCDRP*VAAMFS
Trigger: TGAGAACATGGCTGCCACCCAAGGCCTATCACACAT...GGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCATCTAGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp CATTTGTATTTCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAAGGTTCCATGAGGTACTaGGAAGTGAGCATGAGGGCG +
Preference number: 4 (lower is better)
Translates to: HLYFLLPLSALAWPVSWEGSMRY*EVSMRA
Trigger: CGCCCTCATGCTCACTTCCCAGTACCTCATGGAACC...TTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGAAATACAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp AACATCACAACGATGGCTACAAACCACCACAATCCAGTTTACTCAGCCAAAGACTCAAGATCCTGGGCCTaGGCTGGAGCCTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: NITTMATNHHNPVYSAKDSRSWA*AGASAS
Trigger: TGAGGCTGAGGCTCCAGCTCAGGCCCAGGATCTTGA...GTCTTTGGCTGAGTAAACTGGATTGTGGTGGTTTGTAGCCATCGTTGTGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp TGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCCTTCTTTGTCTGCTAATGGTGCATTaGTCCTCCTCTTCTGAGTCG +
Preference number: 4 (lower is better)
Translates to: WDRSGWYQPGWLRYALLCLLMVH*SSSSES
Trigger: CGACTCAGAAGAGGAGGAGCAATGCACCATTAGCAG...ACAAAGAAGGGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp GCTTTATTATTCTGCAGAGGGAACTGCTGCGGCCTGCCCTTCACCTCTCCTCTCGAATTCTGGAAGCTGTaGCAACGAAGTTTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: ALLFCRGNCCGLPFTSPLEFWKL*QRSFLH
Trigger: ATGCAGGAAACTTCGTTGGCACAGCTTCCAGAATTC...GAGAGGAGAGGTGAAGGGCAGGCCGCAGCAGTTCCCTCTGCAGAATAATAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp GCTTTATTATTCTGCAGAGGGAACTGCTGCGGCCTGCCCTTCACCTCTCCTCTCTCCATGGCACACAAGTaGCCAAAGACTTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: ALLFCRGNCCGLPFTSPLSMAHK*PKTLLY
Trigger: GTACAACAAAGTCTTTGGGCACTTGTGTGCCATGGA...GAGAGGAGAGGTGAAGGGCAGGCCGCAGCAGTTCCCTCTGCAGAATAATAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TGGGTGGAGGTAGGATACCTACGCCCTCTTCTCTTGTGTGTGTGCAGAGTAGCATTCTTTACTTTGTCTTaGGAACCCTCCTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: WVEVGYLRPLLLCVCRVAFFTLS*EPSWPW
Trigger: CCAAGGCCAGGAGGGTTCCCAAGACAAAGTAAAGAA...TGCTACTCTGCACACACACAAGAGAAGAGGGCGTAGGTATCCTACCTCCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp GTCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACGAGGATGCCGGAATGTaGCTACAGGCCAAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: VSKGFSVHIPTHFFGGRHEDAGM*LQAKPP
Trigger: GGGAGGCTTGGCCTGTAGCCACATTCCGGCATCCTC...GTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCACGAGGGAACGTGCCTaGCTTATGGTCCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SLKASQFIFPLISLVADTTRERA*LMVPRH
Trigger: GTGCCTGGGGACCATAAGCCAGGCACGTTCCCTCGT...GGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp AGGGCATCAGATCTCATTACAGATGGTTGTGAACCACCCTGCGATTGCTGGGAACCGCTGTGTCAGAAATaGAATGCCCTTCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: RASDLITDGCEPPCDCWEPLCQK*NALPPQ
Trigger: CTGTGGAGGAAGGGCATTCCATTTCTGACACAGCGG...TTCCCAGCAATCGCAGGGTGGTTCACAACCATCTGTAATGAGATCTGATGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCCTTCTTTGTTTGGAGACATTGAGGTaGAAGATGGAAGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: WDRSGWYQPGWLRYALLCLETLR*KMEGAR
Trigger: CCTGGCACCTTCCATCTTCCACCTCAATGTCTCCAA...ACAAAGAAGGGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp CTCTTGTGTGTGTGCAGAGTAGCATTAGGATACAAGAGGATAGGTAGCTGGGCCGTGATAGGCCTTGGGTaGCAGCCATGTTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: LLCVCRVALGYKRIGSWAVIGLG*QPCSHS
Trigger: TGAGTGAGAACATGGCTGCCACCCAAGGCCTATCAC...GGCCCAGCTACCTATCCTCTTGTATCCTAATGCTACTCTGCACACACACAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CAA 72 bp AGGTGGGTGGAGGTAGGATACCTACGCCCTCTTCTCTaGTGTGTGTGCAGAGTAGCATTAGGATACAAGAGG +
Preference number: 4 (lower is better)
Translates to: RWVEVGYLRPLL*CVCRVALGYKR
Trigger: CCTCTTGTATCCTAATGCTACTCTGCACACACACAAGAGAAGAGGGCGTAGGTATCCTACCTCCACCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp AGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCTGGCAATCCTGTGAAATCCAGCTaGGAGGAAGCCACGGCAAGT +
Preference number: 4 (lower is better)
Translates to: RLLSSYSHSFLWWQTPGNPVKSS*EEATAS
Trigger: ACTTGCCGTGGCTTCCTCTCAGCTGGATTTCACAGG...ATTGCCAGGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp GCCACTGCTCTTAACCACTATGCCACCTCTCCAGCCAAAAGGACTGTTCTTATATGCCAATCTGCCAGGTaGCGACCTTCATCTGGACAA +
Preference number: 4 (lower is better)
Translates to: ATALNHYATSPAKRTVLICQSAR*RPSSGQ
Trigger: TTGTCCAGATGAAGGTCGTCACCTGGCAGATTGGCA...TATAAGAACAGTCCTTTTGGCTGGAGAGGTGGCATAGTGGTTAAGAGCAGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp AGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCTGGCAATTCTGGGTACATGGTCTaGGACCACAGCTCTACCCGT +
Preference number: 4 (lower is better)
Translates to: RLLSSYSHSFLWWQTPGNSGYMV*DHSSTR
Trigger: ACGGGTAGAGCTGTGGTCTCAGACCATGTACCCAGA...ATTGCCAGGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp CGATTGCTGGGAATTGAACTTTTAGGTCCTCTGGAAGAGCAGCCACTGCTCTTACCTTGTGAAGCAAGTTaGTCTGGCCTGCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: RLLGIELLGPLEEQPLLLPCEAS*SGLQTA
Trigger: GGCAGTTTGCAGGCCAGATCAACTTGCTTCACAAGG...TAAGAGCAGTGGCTGCTCTTCCAGAGGACCTAAAAGTTCAATTCCCAGCAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp TCAGCATCATGTTCACATATAAAATGGATTGTGGTGGTCATTGTGTCCCCCGTGGGCTGCGTTTGCTCTTaGTCCTGGGTGAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SASCSHIKWIVVVIVSPVGCVCS*SWVRSC
Trigger: ACAGCTCCTCACCCAGGATCAAGAGCAAACGCAGCC...CACGGGGGACACAATGACCACCACAATCCATTTTATATGTGAACATGATGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp ACCACTAGATGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCCTCAGAGATTCAAGGTaGTTGAGGAAGCTTCGAGAA +
Preference number: 4 (lower is better)
Translates to: TTRWDRSGWYQPGWLRYALRDSR*LRKLRE
Trigger: TTCTCGAAGCTTCCTCAAGCACCTTGAATCTCTGAG...GGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCATCTAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp TGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCCTTCTTTGTGGCAGAAATTGGCTCTaGAGTCGAGTTAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: WDRSGWYQPGWLRYALLCGRNWL*SRVSFL
Trigger: CAAGAAGCTAACTCGACTGCAGAGCCAATTTCTGCC...ACAAAGAAGGGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp CATTTGTATTTCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAAAGACCTAACAAGGGCTaGTCTGCTGACTCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: HLYFLLPLSALAWPVSWERPNKG*SADSGE
Trigger: TTCACCAGAGTCAGCAGACCAGCCCTTGTTAGGTCT...TTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGAAATACAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAATGAGCTATTTCCAGCCACTGTTCTTTaGGGAGGAGCTGATAGATTT +
Preference number: 4 (lower is better)
Translates to: SCCHCQLWPGLCHGNELFPATVL*GGADRF
Trigger: AAATCTATCAGCTCCTCCCCAAAGAACAGTGGCTGG...AAATAGCTCATTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp GTCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACAAGCGGGTGCCCATCTaGTGCCTTCCTACAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VSKGFSVHIPTHFFGGRHKRVPI*CLPTSQ
Trigger: CTGGCTTGTAGGAAGGCACCAGATGGGCACCCGCTT...GTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp CGATTGCTGGGAATTGAACTTTTAGGTCCTCTGGAAGAGCAGCCACTGCTCTTACTGCAAACTGCCTGTTaGTCTCCAGTGACTCTGAGT +
Preference number: 4 (lower is better)
Translates to: RLLGIELLGPLEEQPLLLLQTAC*SPVTLS
Trigger: ACTCAGAGTCACTGGAGATCAACAGGCAGTTTGCAG...TAAGAGCAGTGGCTGCTCTTCCAGAGGACCTAAAAGTTCAATTCCCAGCAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp AAACTCAAAAGAACCCTAGCACCAAATAAGATGGCCTGCCTACTTGGTATGGCAAGTGAGCCGCAGCAGTaGGCCCTTGTGAAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: KLKRTLAPNKMACLLGMASEPQQ*ALVKQV
Trigger: AACTTGCTTCACAAGGGCTCACTGCTGCGGCTCACT...TGCCATACCAAGTAGGCAGGCCATCTTATTTGGTGCTAGGGTTCTTTTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp GTCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACTGCGCTGCACATGAATaGGGGGTGGCACCCCAAATA +
Preference number: 4 (lower is better)
Translates to: VSKGFSVHIPTHFFGGRHCAAHE*GVAPQI
Trigger: TATTTGGGGTGCCACCCCTCATTCATGTGCAGCGCA...GTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp AGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCTGGCAATAAATCACGGCAAGGATaGGGTGCCATGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: RLLSSYSHSFLWWQTPGNKSRQG*GAMLSV
Trigger: CACTGACAGCATGGCACCTCATCCTTGCCGTGATTT...ATTGCCAGGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp AGGGCATCAGATCTCATTACAGATGGTTGTGAACCACCCTGCGATTGCTGGGAAAGAGTCTCGGATCTTTaGCACTTCCATGGCACACAA +
Preference number: 4 (lower is better)
Translates to: RASDLITDGCEPPCDCWERVSDL*HFHGTQ
Trigger: TTGTGTGCCATGGAAGTGGCAAAGATCCGAGACTCT...TTCCCAGCAATCGCAGGGTGGTTCACAACCATCTGTAATGAGATCTGATGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp AGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCTGGCAATTGCTCAAAGGCCCAGTaGCTGCTAATGGTGCATTGC +
Preference number: 4 (lower is better)
Translates to: RLLSSYSHSFLWWQTPGNCSKAQ*LLMVHC
Trigger: GCAATGCACCATTAGCAGCCACTGGGCCTTTGAGCA...ATTGCCAGGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp GCCACTGCTCTTAACCACTATGCCACCTCTCCAGCCAAAAGGACTGTTCTTATAGACAAAGGCTCTCAATaGACAGAGAACGAGGGAACG +
Preference number: 4 (lower is better)
Translates to: ATALNHYATSPAKRTVLIDKGSQ*TENEGT
Trigger: CGTTCCCTCGTTCTCTGTCCATTGAGAGCCTTTGTC...TATAAGAACAGTCCTTTTGGCTGGAGAGGTGGCATAGTGGTTAAGAGCAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp AGGGCATCAGATCTCATTACAGATGGTTGTGAACCACCCTGCGATTGCTGGGAAGTGTCCCCGGTAGTCTaGGGTCTTGTTTCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: RASDLITDGCEPPCDCWEVSPVV*GLVSFH
Trigger: ATGAAAAGAAACAAGACCCCAGACTACCGGGGACAC...TTCCCAGCAATCGCAGGGTGGTTCACAACCATCTGTAATGAGATCTGATGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TCAGCATCATGTTCACATATAAAATGGATTGTGGTGGTCATTGTGTCCCCCGTGTTGCCAGCTGTCATCTaGTTTTCCTCGGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: SASCSHIKWIVVVIVSPVLPAVI*FSSAEA
Trigger: CGCCTCTGCCGAGGAAAACCAGATGACAGCTGGCAA...CACGGGGGACACAATGACCACCACAATCCATTTTATATGTGAACATGATGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CAA 72 bp CAAAGTAGGGGAGGATGGTTCATTGGTTTCTTGGGCTaGAGGAAGAAAGGTCCTCTAACCTCAGATCCCAAG +
Preference number: 4 (lower is better)
Translates to: QSRGGWFIGFLG*RKKGPLTSDPK
Trigger: CTTGGGATCTGAGGTTAGAGGACCTTTCTTCCTCAAGCCCAAGAAACCAATGAACCATCCTCCCCTACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CAA 72 bp CTGGTATCAGCCAGGATGGCTAAGGTACGCCCTTCTTaGTGTTTTTCTAGGGTGTCTACTCTAGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: LVSARMAKVRPS*CFSRVSTLGMD
Trigger: GTCCATTCCTAGAGTAGACACCCTAGAAAAACACAAAGAAGGGCGTACCTTAGCCATCCTGGCTGATACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp TCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCTTGCTCCTCCTCTTCTaGGTCGTCATCCTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SLKASQFIFPLISLVADTLLLLF*VVILLA
Trigger: TGCAAGCAGGATGACGACTCAGAAGAGGAGGAGCAA...GGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp TGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCCTTCTTTGTGAGATTCAAGGTGCTTaGGGAAGCTTCGAGAATAAT +
Preference number: 4 (lower is better)
Translates to: WDRSGWYQPGWLRYALLCEIQGA*GSFENN
Trigger: ATTATTCTCGAAGCTTCCTCAAGCACCTTGAATCTC...ACAAAGAAGGGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp AACATCACAACGATGGCTACAAACCACCACAATCCAGTTTACTCAGCCAAAGACCTGTTCTTGGCCCTGTaGAATCCAGCTGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: NITTMATNHHNPVYSAKDLFLAL*NPAERK
Trigger: CTTCCTCTCAGCTGGATTTCACAGGGCCAAGAACAG...GTCTTTGGCTGAGTAAACTGGATTGTGGTGGTTTGTAGCCATCGTTGTGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp GTCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACAGCAGTGAGCCCTTGTaGAGCAAGTTGATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VSKGFSVHIPTHFFGGRHSSEPL*SKLIWP
Trigger: AGGCCAGATCAACTTGCTTCACAAGGGCTCACTGCT...GTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp TCAGCATCATGTTCACATATAAAATGGATTGTGGTGGTCATTGTGTCCCCCGTGATTTGGCGTAGGCTCTaGATCCTGGACTTGACCCCA +
Preference number: 4 (lower is better)
Translates to: SASCSHIKWIVVVIVSPVIWRRL*ILDLTP
Trigger: TGGGGTCAAGTCCAGGATTCAGAGCCTACGCCAAAT...CACGGGGGACACAATGACCACCACAATCCATTTTATATGTGAACATGATGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR TCA 90 bp CATTTGTATTTCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAAGTTTCTTGCAGTCACTaGTCATGTGTGATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: HLYFLLPLSALAWPVSWEVSCSH*SCVIGL
Trigger: AAGGCCTATCACACATGATCAGTGACTGCAAGAAAC...TTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGAAATACAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TCAGCATCATGTTCACATATAAAATGGATTGTGGTGGTCATTGTGTCCCCCGTGAGTTGTCGTAAGTGCTaGCATGGCTGCCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: SASCSHIKWIVVVIVSPVSCRKC*HGCLWN
Trigger: GTTCCACAGGCAGCCATGCCAGCACTTACGACAACT...CACGGGGGACACAATGACCACCACAATCCATTTTATATGTGAACATGATGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp AACATCACAACGATGGCTACAAACCACCACAATCCAGTTTACTCAGCCAAAGACGCTAGATCTTCATCCTaGCCTTCCACCTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: NITTMATNHHNPVYSAKDARSSS*PSTSTV
Trigger: CACAGTGGAGGTGGAAGGCCAGGATGAAGATCTAGC...GTCTTTGGCTGAGTAAACTGGATTGTGGTGGTTTGTAGCCATCGTTGTGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp CGATTGCTGGGAATTGAACTTTTAGGTCCTCTGGAAGAGCAGCCACTGCTCTTATGGTTCGACCACATTTaGGGCCTGATCCAGAACAAT +
Preference number: 4 (lower is better)
Translates to: RLLGIELLGPLEEQPLLLWFDHI*GLIQNN
Trigger: ATTGTTCTGGATCAGGCCCCAAATGTGGTCGAACCA...TAAGAGCAGTGGCTGCTCTTCCAGAGGACCTAAAAGTTCAATTCCCAGCAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCACCCAGGCCTGTTTGTaGGGTACAGTGTACTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLKASQFIFPLISLVADTTQACL*GTVYFS
Trigger: GGAGAAGTACACTGTACCCCACAAACAGGCCTGGGT...GGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp GTCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACTGCACCACCATGTCCTaGGGCACCTGGAAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: VSKGFSVHIPTHFFGGRHCTTMS*GTWKSF
Trigger: GAAACTTTTCCAGGTGCCCCAGGACATGGTGGTGCA...GTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCCTGTATAGGCTCAGCTaGGTACAGCTCAGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: SLKASQFIFPLISLVADTLYRLS*VQLRQV
Trigger: AACTTGCCTGAGCTGTACCCAGCTGAGCCTATACAG...GGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp AACATCACAACGATGGCTACAAACCACCACAATCCAGTTTACTCAGCCAAAGACTCAGGTCTGGGTACATaGTCTGAGACCACAGCTCTA +
Preference number: 4 (lower is better)
Translates to: NITTMATNHHNPVYSAKDSGLGT*SETTAL
Trigger: TAGAGCTGTGGTCTCAGACCATGTACCCAGACCTGA...GTCTTTGGCTGAGTAAACTGGATTGTGGTGGTTTGTAGCCATCGTTGTGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp AAACTCAAAAGAACCCTAGCACCAAATAAGATGGCCTGCCTACTTGGTATGGCACTTCCACCTCCACTGTaGCTACTTCCACTGATGAAG +
Preference number: 4 (lower is better)
Translates to: KLKRTLAPNKMACLLGMALPPPL*LLPLMK
Trigger: CTTCATCAGTGGAAGTAGCCACAGTGGAGGTGGAAG...TGCCATACCAAGTAGGCAGGCCATCTTATTTGGTGCTAGGGTTCTTTTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CAA 72 bp CGATCTGGTGTTCCAGACCTGTATTCAGGATCAATGTaGGCCCCAAAGGCAGGATCAGACCTCATATTCAAA +
Preference number: 4 (lower is better)
Translates to: RSGVPDLYSGSM*APKAGSDLIFK
Trigger: TTTGAATATGAGGTCTGATCCTGCCTTTGGGGCCAACATTGATCCTGAATACAGGTCTGGAACACCAGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp TCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCCCTCATTCATGGAGTTaGCACTACTGTCAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SLKASQFIFPLISLVADTPHSWS*HYCQAH
Trigger: GTGAGCTTGACAGTAGTGGCAACTCCATGAATGAGG...GGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp TCAGCATCATGTTCACATATAAAATGGATTGTGGTGGTCATTGTGTCCCCCGTGCAAGTTGATCTGGCCTaGAAACTGCCTGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: SASCSHIKWIVVVIVSPVQVDLA*KLPVDL
Trigger: GAGATCAACAGGCAGTTTGCAGGCCAGATCAACTTG...CACGGGGGACACAATGACCACCACAATCCATTTTATATGTGAACATGATGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CCA 90 bp TCAGCATCATGTTCACATATAAAATGGATTGTGGTGGTCATTGTGTCCCCCGTGGTGACGACCTTCATCTaGACAAAGGCTCTCAATGGA +
Preference number: 4 (lower is better)
Translates to: SASCSHIKWIVVVIVSPVVTTFI*TKALNG
Trigger: TCCATTGAGAGCCTTTGTCCAGATGAAGGTCGTCAC...CACGGGGGACACAATGACCACCACAATCCATTTTATATGTGAACATGATGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
3UTR CAA 72 bp AGCGTCTTCTTGGTCAGATGGACAGCAATGATCTTCTaGCCACTAACAAGATTCTCTTCGCTTGTGAGATCA +
Preference number: 4 (lower is better)
Translates to: SVFLVRWTAMIF*PLTRFSSLVRS
Trigger: TGATCTCACAAGCGAAGAGAATCTTGTTAGTGGCAAGAAGATCATTGCTGTCCATCTGACCAAGAAGACGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR GCA 90 bp TCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCAGGTCTCTGAAATACTaGTTCAGTAAATCAGCCACA +
Preference number: 4 (lower is better)
Translates to: SLKASQFIFPLISLVADTRSLKY*FSKSAT
Trigger: TGTGGCTGATTTACTGAAGCAGTATTTCAGAGACCT...GGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 90 bp CGCAGGAGGTCCTCATCCCACAAGGCCCGCTCCCGAAGGACACGATaGAGCACCACGGCTGGAGGGGCAGCCACTTCTGTGGATGCCTTC +
Preference number: 5 (lower is better)
Translates to: RRRSSSHKARSRRTR*STTAGGAATSVDAF
Trigger: GAAGGCATCCACAGAAGTGGCTGCCCCTCCAGCCGTGGTGCTGCATCGTGTCCTTCGGGAGCGGGCCTTGTGGGATGAGGACCTCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 90 bp CAGCTGGGTACAGCTCAGGCAAGTTGTCGTAAGTGCTGGCATGGCTaGCTGTGGAACCACAGGAGCCCCGGCGCCCTTCATAGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: QLGTAQASCRKCWHG*LWNHRSPGALHSPS
Trigger: GCTGGGGCTATGAAGGGCGCCGGGGCTCCTGTGGTTCCACAGGCAGCCATGCCAGCACTTACGACAACTTGCCTGAGCTGTACCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 90 bp CGAAGCGGGTGCCCATCTGGTGCCTTCCTACAAGCCAGCTCTGTGTaGTGGGGCCCCGGCACATTGGTCCAGCCCTTGAAGCGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: RSGCPSGAFLQASSV*WGPGTLVQPLKRSA
Trigger: TGCAGAACGCTTCAAGGGCTGGACCAATGTGCCGGGGCCCCAGCACACAGAGCTGGCTTGTAGGAAGGCACCAGATGGGCACCCGCTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 90 bp AGCGGGTGCCCATCTGGTGCCTTCCTACAAGCCAGCTCTGTGTGCTaGGGCCCCGGCACATTGGTCCAGCCCTTGAAGCGTTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SGCPSGAFLQASSVC*GPGTLVQPLKRSAA
Trigger: TGCTGCAGAACGCTTCAAGGGCTGGACCAATGTGCCGGGGCCCCAGCACACAGAGCTGGCTTGTAGGAAGGCACCAGATGGGCACCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 90 bp ATCCCACAAGGCCCGCTCCCGAAGGACACGATGCAGCACCACGGCTaGAGGGGCAGCCACTTCTGTGGATGCCTTCCACATTCGAAGCGG +
Preference number: 5 (lower is better)
Translates to: IPQGPLPKDTMQHHG*RGSHFCGCLPHSKR
Trigger: CCGCTTCGAATGTGGAAGGCATCCACAGAAGTGGCTGCCCCTCCAGCCGTGGTGCTGCATCGTGTCCTTCGGGAGCGGGCCTTGTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 90 bp GGTACAGCTCAGGCAAGTTGTCGTAAGTGCTGGCATGGCTGCCTGTaGAACCACAGGAGCCCCGGCGCCCTTCATAGCCCCAGCACCTAC +
Preference number: 5 (lower is better)
Translates to: GTAQASCRKCWHGCL*NHRSPGALHSPSTY
Trigger: GTAGGTGCTGGGGCTATGAAGGGCGCCGGGGCTCCTGTGGTTCCACAGGCAGCCATGCCAGCACTTACGACAACTTGCCTGAGCTGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 90 bp GAAGGACACGATGCAGCACCACGGCTGGAGGGGCAGCCACTTCTGTaGATGCCTTCCACATTCGAAGCGGGTGCCCATCTGGTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: EGHDAAPRLEGQPLL*MPSTFEAGAHLVPS
Trigger: GGAAGGCACCAGATGGGCACCCGCTTCGAATGTGGAAGGCATCCACAGAAGTGGCTGCCCCTCCAGCCGTGGTGCTGCATCGTGTCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 90 bp TGTGTGCTGGGGCCCCGGCACATTGGTCCAGCCCTTGAAGCGTTCTaGAGCATCCCGAAGCAGCTCCTGCACACTCTCCTCCATGTAAAG +
Preference number: 5 (lower is better)
Translates to: CVLGPRHIGPALEAF*SIPKQLLHTLLHVK
Trigger: CTTTACATGGAGGAGAGTGTGCAGGAGCTGCTTCGGGATGCTGCAGAACGCTTCAAGGGCTGGACCAATGTGCCGGGGCCCCAGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp TGGGTGGAGGTAGGATACCTACGCCCTCTTCTCTTGTGTGTGTGCAGAGTAGCACAGCAAGGTGGCAGCTaGCGCCGCTGCCAGCCACTG +
Preference number: 5 (lower is better)
Translates to: WVEVGYLRPLLLCVCRVAQQGGS*RRCQPL
Trigger: CAGTGGCTGGCAGCGGCGCAAGCTGCCACCTTGCTG...TGCTACTCTGCACACACACAAGAGAAGAGGGCGTAGGTATCCTACCTCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 90 bp AGGAAGGGTTGGTTACTTGGGCTGGGGACAAGACCTAACAAGGGCTaGTCTGCTGACTCTGGTGAAAGGCTCGCGGAGATGGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: RKGWLLGLGTRPNKG*SADSGERLAEMAGR
Trigger: CCTGCCAGCCATCTCCGCGAGCCTTTCACCAGAGTCAGCAGACCAGCCCTTGTTAGGTCTTGTCCCCAGCCCAAGTAACCAACCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp ACCACTAGATGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCTGGGGCCCCGGCACATaGGTCCAGCCCTTGAAGCGT +
Preference number: 5 (lower is better)
Translates to: TTRWDRSGWYQPGWLRYAWGPGT*VQPLKR
Trigger: ACGCTTCAAGGGCTGGACCAATGTGCCGGGGCCCCA...GGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCATCTAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 90 bp CTCTTGATCCTGGGTGAGGAGCTGTCCTTCTTGGAGACATTGAGGTaGAAGATGGAAGGTGCCAGGCACACCGCCAGGTTGCCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: LLILGEELSFLETLR*KMEGARHTARLPAV
Trigger: GACAGCTGGCAACCTGGCGGTGTGCCTGGCACCTTCCATCTTCCACCTCAATGTCTCCAAGAAGGACAGCTCCTCACCCAGGATCAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 90 bp CACGGCAAGTGCGGAAAGATGAAGCTTTGGTGGCCTTTTCCGAGGTaGCAAGGCATTGCTCGGGTTCTGTCTGCCGGCTGTCACCCTTTT +
Preference number: 5 (lower is better)
Translates to: HGKCGKMKLWWPFPR*QGIARVLSAGCHPF
Trigger: AAAAGGGTGACAGCCGGCAGACAGAACCCGAGCAATGCCTTGCCACCTCGGAAAAGGCCACCAAAGCTTCATCTTTCCGCACTTGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 90 bp ATCTGGACAAAGGCTCTCAATGGACAGAGAACGAGGGAACGTGCCTaGCTTATGGTCCCCAGGCACATGCACCAGATAGTCACGCCTGCG +
Preference number: 5 (lower is better)
Translates to: IWTKALNGQRTRERA*LMVPRHMHQIVTPA
Trigger: CGCAGGCGTGACTATCTGGTGCATGTGCCTGGGGACCATAAGCCAGGCACGTTCCCTCGTTCTCTGTCCATTGAGAGCCTTTGTCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 90 bp AAGATCCTGGGCCTGAGCTGGAGCCTCAGCCTCAGCCTGTACCAATaGTTCGACCACATTTGGGGCCTGATCCAGAACAATCAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: KILGLSWSLSLSLYQ*FDHIWGLIQNNQWD
Trigger: GTCCCACTGATTGTTCTGGATCAGGCCCCAAATGTGGTCGAACCATTGGTACAGGCTGAGGCTGAGGCTCCAGCTCAGGCCCAGGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 90 bp CCATCTCTGACCCTGGCTGAAGTGGTGACCCTGTTCTTGGCCCTGTaGAATCCAGCTGAGAGGAAGCCACGGCAAGTGCGGAAAGATGAA +
Preference number: 5 (lower is better)
Translates to: PSLTLAEVVTLFLAL*NPAERKPRQVRKDE
Trigger: TTCATCTTTCCGCACTTGCCGTGGCTTCCTCTCAGCTGGATTTCACAGGGCCAAGAACAGGGTCACCACTTCAGCCAGGGTCAGAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 90 bp CCACATTTGGGGCCTGATCCAGAACAATCAGTGGGACTTCCTCCTTaGCTTGGGTTGGGAACCCTCTGTGGGCTTGAGACTCTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: PHLGPDPEQSVGLPP*LGLGTLCGLETLPE
Trigger: CTCAGGCAGAGTCTCAAGCCCACAGAGGGTTCCCAACCCAAGTCAAGGAGGAAGTCCCACTGATTGTTCTGGATCAGGCCCCAAATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 90 bp ATTGGCTCTGCAGTCGAGTTAGCTTCTTGCTCAAGATCCTGGGCCTaGGCTGGAGCCTCAGCCTCAGCCTGTACCAATGGTTCGACCACA +
Preference number: 5 (lower is better)
Translates to: IGSAVELASCSRSWA*AGASASACTNGSTT
Trigger: TGTGGTCGAACCATTGGTACAGGCTGAGGCTGAGGCTCCAGCTCAGGCCCAGGATCTTGAGCAAGAAGCTAACTCGACTGCAGAGCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 90 bp CGGAAAGATGAAGCTTTGGTGGCCTTTTCCGAGGTGGCAAGGCATTaGTCGGGTTCTGTCTGCCGGCTGTCACCCTTTTCTTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RKDEALVAFSEVARH*SGSVCRLSPFSFLL
Trigger: GAGGAGGAAAGAAAAGGGTGACAGCCGGCAGACAGAACCCGAGCAATGCCTTGCCACCTCGGAAAAGGCCACCAAAGCTTCATCTTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 90 bp CTTCATCTGGACAAAGGCTCTCAATGGACAGAGAACGAGGGAACGTaGCTGGCTTATGGTCCCCAGGCACATGCACCAGATAGTCACGCC +
Preference number: 5 (lower is better)
Translates to: LHLDKGSQWTENEGT*LAYGPQAHAPDSHA
Trigger: GGCGTGACTATCTGGTGCATGTGCCTGGGGACCATAAGCCAGGCACGTTCCCTCGTTCTCTGTCCATTGAGAGCCTTTGTCCAGATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 90 bp GCAGTCCTGCAGGGGCGTCTGCAGCATCAGCCTCATTCATGGAGTTaGCACTACTGTCAAGCTCACTGGAGGAAACCGCTGTGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: AVLQGRLQHQPHSWS*HYCQAHWRKPLCQK
Trigger: TTTCTGACACAGCGGTTTCCTCCAGTGAGCTTGACAGTAGTGGCAACTCCATGAATGAGGCTGATGCTGCAGACGCCCCTGCAGGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 90 bp CGAGCGCCACATCCTGAGCACCACAAAATCACGGCAAGGATGAGGTaGCATGCTGTCAGTGACATAGTGGTACAGCTCCACACCTGGCAT +
Preference number: 5 (lower is better)
Translates to: RAPHPEHHKITARMR*HAVSDIVVQLHTWH
Trigger: ATGCCAGGTGTGGAGCTGTACCACTATGTCACTGACAGCATGGCACCTCATCCTTGCCGTGATTTTGTGGTGCTCAGGATGTGGCGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp CTGCCTACTTGGTATGGCAGAGAGCCCAGGCTGTCCAAGGCTCTCCACCTTCTTGAGGAGCTGTCCTTCTaGGAGACATTGAGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LPTWYGREPRLSKALHLLEELSF*ETLRWK
Trigger: CTTCCACCTCAATGTCTCCAAGAAGGACAGCTCCTC...AAGAAGGTGGAGAGCCTTGGACAGCCTGGGCTCTCTGCCATACCAAGTAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 90 bp GTGGGGTACAGTGTACTTCTCCATGAAGCCAGTGAGCCGCAGCAGTaGGCCCTTGTGAAGCAAGTTGATCTGGCCTGCAAACTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: VGYSVLLHEASEPQQ*ALVKQVDLACKLPV
Trigger: AACAGGCAGTTTGCAGGCCAGATCAACTTGCTTCACAAGGGCTCACTGCTGCGGCTCACTGGCTTCATGGAGAAGTACACTGTACCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 90 bp CTACTGTCAAGCTCACTGGAGGAAACCGCTGTGTCAGAAATGGAATaGCCTTCCTCCACAGACAGGCTGGAGGCAGAAATTGGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: LLSSSLEETAVSEME*PSSTDRLEAEIGSA
Trigger: TGCAGAGCCAATTTCTGCCTCCAGCCTGTCTGTGGAGGAAGGGCATTCCATTTCTGACACAGCGGTTTCCTCCAGTGAGCTTGACAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 90 bp GTTGGGAAAGAGTCTCGGATCTTTGCCACTTCCATGGCACACAAGTaGCCAAAGACTTTGTTGTACCAGTCAGGAGAACGGCCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: VGKESRIFATSMAHK*PKTLLYQSGERPLR
Trigger: CCTCAGGGGCCGTTCTCCTGACTGGTACAACAAAGTCTTTGGGCACTTGTGTGCCATGGAAGTGGCAAAGATCCGAGACTCTTTCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 90 bp TTCCGGGCCAGCTGCCTGAAGGGTTGGGAAAGAGTCTCGGATCTTTaGCACTTCCATGGCACACAAGTGCCCAAAGACTTTGTTGTACCA +
Preference number: 5 (lower is better)
Translates to: FRASCLKGWERVSDL*HFHGTQVPKDFVVP
Trigger: TGGTACAACAAAGTCTTTGGGCACTTGTGTGCCATGGAAGTGGCAAAGATCCGAGACTCTTTCCCAACCCTTCAGGCAGCTGGCCCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 90 bp AGAAATGGAATGCCCTTCCTCCACAGACAGGCTGGAGGCAGAAATTaGCTCTGCAGTCGAGTTAGCTTCTTGCTCAAGATCCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: RNGMPFLHRQAGGRN*LCSRVSFLLKILGL
Trigger: CAGGCCCAGGATCTTGAGCAAGAAGCTAACTCGACTGCAGAGCCAATTTCTGCCTCCAGCCTGTCTGTGGAGGAAGGGCATTCCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 90 bp TGCCACTACTGTCAAGCTCACTGGAGGAAACCGCTGTGTCAGAAATaGAATGCCCTTCCTCCACAGACAGGCTGGAGGCAGAAATTGGCT +
Preference number: 5 (lower is better)
Translates to: CHYCQAHWRKPLCQK*NALPPQTGWRQKLA
Trigger: AGCCAATTTCTGCCTCCAGCCTGTCTGTGGAGGAAGGGCATTCCATTTCTGACACAGCGGTTTCCTCCAGTGAGCTTGACAGTAGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp TCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAATGAGCTATTTGACTTCCTCCTTGACTaGGGTTGGGAACCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SCCHCQLWPGLCHGNELFDFLLD*GWEPSV
Trigger: CACAGAGGGTTCCCAACCCAAGTCAAGGAGGAAGTC...AAATAGCTCATTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp ACCACTAGATGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCCATACCCAGGCCTGTTaGTGGGGTACAGTGTACTTC +
Preference number: 5 (lower is better)
Translates to: TTRWDRSGWYQPGWLRYAHTQAC*WGTVYF
Trigger: GAAGTACACTGTACCCCACAAACAGGCCTGGGTATG...GGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCATCTAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp CATTTGTATTTCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAAGACTTGACCCCAGACTaGCGAAAGATGCCCACCTGG +
Preference number: 5 (lower is better)
Translates to: HLYFLLPLSALAWPVSWEDLTPD*RKMPTW
Trigger: CCAGGTGGGCATCTTTCGCAAGTCTGGGGTCAAGTC...TTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGAAATACAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp GCCACTGCTCTTAACCACTATGCCACCTCTCCAGCCAAAAGGACTGTTCTTATAAGACTCTGGCACGGGTaGCTCAGGATCCAGGGACTG +
Preference number: 5 (lower is better)
Translates to: ATALNHYATSPAKRTVLIRLWHG*LRIQGL
Trigger: CAGTCCCTGGATCCTGAGCAACCCGTGCCAGAGTCT...TATAAGAACAGTCCTTTTGGCTGGAGAGGTGGCATAGTGGTTAAGAGCAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp TCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAATGAGCTATTTCAGCTGCCTGAAGGGTaGGGAAAGAGTCTCGGATCT +
Preference number: 5 (lower is better)
Translates to: SCCHCQLWPGLCHGNELFQLPEG*GKSLGS
Trigger: AGATCCGAGACTCTTTCCCAACCCTTCAGGCAGCTG...AAATAGCTCATTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 90 bp CAGCATCAGCCTCATTCATGGAGTTGCCACTACTGTCAAGCTCACTaGAGGAAACCGCTGTGTCAGAAATGGAATGCCCTTCCTCCACAG +
Preference number: 5 (lower is better)
Translates to: QHQPHSWSCHYCQAH*RKPLCQKWNALPPQ
Trigger: CTGTGGAGGAAGGGCATTCCATTTCTGACACAGCGGTTTCCTCCAGTGAGCTTGACAGTAGTGGCAACTCCATGAATGAGGCTGATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp ACCACTAGATGGGATAGATCAGGCTGGTATCAGCCAGGATGGCTAAGGTACGCCATGGTTCGACCACATTaGGGGCCTGATCCAGAACAA +
Preference number: 5 (lower is better)
Translates to: TTRWDRSGWYQPGWLRYAMVRPH*GPDPEQ
Trigger: TTGTTCTGGATCAGGCCCCAAATGTGGTCGAACCAT...GGCGTACCTTAGCCATCCTGGCTGATACCAGCCTGATCTATCCCATCTAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp CTCTTGTGTGTGTGCAGAGTAGCATTAGGATACAAGAGGATAGGTAGCTGGGCCTCCAGTGACTCTGAGTaGAGGCTAGGTCGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LLCVCRVALGYKRIGSWASSDSE*RLGRWE
Trigger: TTCCCACCGACCTAGCCTCAACTCAGAGTCACTGGA...GGCCCAGCTACCTATCCTCTTGTATCCTAATGCTACTCTGCACACACACAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp TGGGTGGAGGTAGGATACCTACGCCCTCTTCTCTTGTGTGTGTGCAGAGTAGCATGCCCAAAGACTTTGTaGTACCAGTCAGGAGAACGG +
Preference number: 5 (lower is better)
Translates to: WVEVGYLRPLLLCVCRVACPKTL*YQSGER
Trigger: CCGTTCTCCTGACTGGTACAACAAAGTCTTTGGGCA...TGCTACTCTGCACACACACAAGAGAAGAGGGCGTAGGTATCCTACCTCCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 90 bp CTGCCTGAAGGGTTGGGAAAGAGTCTCGGATCTTTGCCACTTCCATaGCACACAAGTGCCCAAAGACTTTGTTGTACCAGTCAGGAGAAC +
Preference number: 5 (lower is better)
Translates to: LPEGLGKSLGSLPLP*HTSAQRLCCTSQEN
Trigger: GTTCTCCTGACTGGTACAACAAAGTCTTTGGGCACTTGTGTGCCATGGAAGTGGCAAAGATCCGAGACTCTTTCCCAACCCTTCAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp CTCTTGTGTGTGTGCAGAGTAGCATTAGGATACAAGAGGATAGGTAGCTGGGCCCGGAAAGATGAAGCTTaGGTGGCCTTTTCCGAGGTG +
Preference number: 5 (lower is better)
Translates to: LLCVCRVALGYKRIGSWARKDEA*VAFSEV
Trigger: CACCTCGGAAAAGGCCACCAAAGCTTCATCTTTCCG...GGCCCAGCTACCTATCCTCTTGTATCCTAATGCTACTCTGCACACACACAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp GCCACTGCTCTTAACCACTATGCCACCTCTCCAGCCAAAAGGACTGTTCTTATAAGTGGGACTTCCTCCTaGACTTGGGTTGGGAACCCT +
Preference number: 5 (lower is better)
Translates to: ATALNHYATSPAKRTVLISGTSS*TWVGNP
Trigger: AGGGTTCCCAACCCAAGTCAAGGAGGAAGTCCCACT...TATAAGAACAGTCCTTTTGGCTGGAGAGGTGGCATAGTGGTTAAGAGCAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp CATTTGTATTTCTTGCTGCCACTGTCAGCTTTGGCCTGGCCTGTGTCATGGGAAAGTCGAGTTAGCTTCTaGCTCAAGATCCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: HLYFLLPLSALAWPVSWESRVSF*LKILGL
Trigger: CAGGCCCAGGATCTTGAGCAAGAAGCTAACTCGACT...TTCCCATGACACAGGCCAGGCCAAAGCTGACAGTGGCAGCAAGAAATACAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp AGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCTGGCAATCCAACCAGGCTGCGTTaGCTCTTGATCCTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: RLLSSYSHSFLWWQTPGNPTRLR*LLILGE
Trigger: CTCACCCAGGATCAAGAGCAAACGCAGCCTGGTTGG...ATTGCCAGGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp TCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCAGCCCCAGCACCTACTaGACTGCCAATCTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: SLKASQFIFPLISLVADTSPSTY*TANLPG
Trigger: ACCTGGCAGATTGGCAGTCAAGTAGGTGCTGGGGCT...GGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp AACATCACAACGATGGCTACAAACCACCACAATCCAGTTTACTCAGCCAAAGACAGGCACACCGCCAGGTaGCCAGCTGTCATCTGGTTT +
Preference number: 5 (lower is better)
Translates to: NITTMATNHHNPVYSAKDRHTAR*PAVIWF
Trigger: AAACCAGATGACAGCTGGCAACCTGGCGGTGTGCCT...GTCTTTGGCTGAGTAAACTGGATTGTGGTGGTTTGTAGCCATCGTTGTGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp AAACTCAAAAGAACCCTAGCACCAAATAAGATGGCCTGCCTACTTGGTATGGCAAGGCTGCGTTTGCTCTaGATCCTGGGTGAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KLKRTLAPNKMACLLGMARLRLL*ILGEEL
Trigger: CAGCTCCTCACCCAGGATCAAGAGCAAACGCAGCCT...TGCCATACCAAGTAGGCAGGCCATCTTATTTGGTGCTAGGGTTCTTTTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp GTCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACGGAAGGGTTGGTTACTaGGGCTGGGGACAAGACCTA +
Preference number: 5 (lower is better)
Translates to: VSKGFSVHIPTHFFGGRHGRVGY*GWGQDL
Trigger: TAGGTCTTGTCCCCAGCCCAAGTAACCAACCCTTCC...GTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp CGATTGCTGGGAATTGAACTTTTAGGTCCTCTGGAAGAGCAGCCACTGCTCTTACTTCTTTACTTTGTCTaGGGAACCCTCCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: RLLGIELLGPLEEQPLLLLLYFV*GTLLAL
Trigger: CAAGGCCAGGAGGGTTCCCAAGACAAAGTAAAGAAG...TAAGAGCAGTGGCTGCTCTTCCAGAGGACCTAAAAGTTCAATTCCCAGCAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp AAACTCAAAAGAACCCTAGCACCAAATAAGATGGCCTGCCTACTTGGTATGGCACCTGCAAACTGCCTGTaGATCTCCAGTGACTCTGAG +
Preference number: 5 (lower is better)
Translates to: KLKRTLAPNKMACLLGMAPANCL*ISSDSE
Trigger: CTCAGAGTCACTGGAGATCAACAGGCAGTTTGCAGG...TGCCATACCAAGTAGGCAGGCCATCTTATTTGGTGCTAGGGTTCTTTTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp TCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACCGCCTCATTCATGGAGTaGCCACTACTGTCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: SLKASQFIFPLISLVADTASFME*PLLSSS
Trigger: TGAGCTTGACAGTAGTGGCAACTCCATGAATGAGGC...GGTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp TCAGCATCATGTTCACATATAAAATGGATTGTGGTGGTCATTGTGTCCCCCGTGAAGAGTCTCGGATCTTaGCCACTTCCATGGCACACA +
Preference number: 5 (lower is better)
Translates to: SASCSHIKWIVVVIVSPVKSLGS*PLPWHT
Trigger: TGTGTGCCATGGAAGTGGCAAAGATCCGAGACTCTT...CACGGGGGACACAATGACCACCACAATCCATTTTATATGTGAACATGATGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS-3UTR CAA 90 bp GTCTCTAAAGGCTTCTCAGTTCATATTCCCACTCATTTCTTTGGTGGCAGACACTTTCTTTTCATAAACTaGGGCATTGACCATACCCAG +
Preference number: 5 (lower is better)
Translates to: VSKGFSVHIPTHFFGGRHFLFIN*GIDHTQ
Trigger: CTGGGTATGGTCAATGCCCAAGTTTATGAAAAGAAA...GTGTCTGCCACCAAAGAAATGAGTGGGAATATGAACTGAGAAGCCTTTAGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 72 bp GGCAGCGCTAAGCTCAGTGAGGACGCTTTCGCAGCTTaGGGTCCCCAGGAGGCTAGGGCTTGGTGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: GSAKLSEDAFAA*GPQEARAWWGQ
Trigger: CTGGCCCCACCAAGCCCTAGCCTCCTGGGGACCTCAAGCTGCGAAAGCGTCCTCACTGAGCTTAGCGCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 72 bp TCAGGAGAACGGCCCCTGAGGTCAGCGCGGCAAATATaGGTGAGGCGAGAGCGGCCCAGGCCACAGGGTTCC +
Preference number: 6 (lower is better)
Translates to: SGERPLRSARQI*VRRERPRPQGS
Trigger: GGAACCCTGTGGCCTGGGCCGCTCTCGCCTCACTCATATTTGCCGCGCTGACCTCAGGGGCCGTTCTCCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 72 bp TCCTCATCCCACAAGGCCCGCTCCCGAAGGACACGATaGAGCACCACGGCTGGAGGGGCAGCCACTTCTGTG +
Preference number: 6 (lower is better)
Translates to: SSSHKARSRRTR*STTAGGAATSV
Trigger: CACAGAAGTGGCTGCCCCTCCAGCCGTGGTGCTGCATCGTGTCCTTCGGGAGCGGGCCTTGTGGGATGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 72 bp GGGCCCCGGCACATTGGTCCAGCCCTTGAAGCGTTCTaGAGCATCCCGAAGCAGCTCCTGCACACTCTCCTC +
Preference number: 6 (lower is better)
Translates to: GPRHIGPALEAF*SIPKQLLHTLL
Trigger: GAGGAGAGTGTGCAGGAGCTGCTTCGGGATGCTGCAGAACGCTTCAAGGGCTGGACCAATGTGCCGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp CAGGCAAGTTGTCGTAAGTGCTGGCATGGCTGCCTGTaGAACCACAGGAGCCCCGGCGCCCTTCATAGCCCC +
Preference number: 6 (lower is better)
Translates to: QASCRKCWHGCL*NHRSPGALHSP
Trigger: GGGGCTATGAAGGGCGCCGGGGCTCCTGTGGTTCCACAGGCAGCCATGCCAGCACTTACGACAACTTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp GGTGGCAGCCATGTTCTCACTCAGGTCCCTGGGGCCTaGCCGGCCAACCAGGCTGCGTTTGCTCTTGATCCT +
Preference number: 6 (lower is better)
Translates to: GGSHVLTQVPGA*PANQAAFALDP
Trigger: AGGATCAAGAGCAAACGCAGCCTGGTTGGCCGGCCAGGCCCCAGGGACCTGAGTGAGAACATGGCTGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 72 bp TCTGTGTGCTGGGGCCCCGGCACATTGGTCCAGCCCTaGAAGCGTTCTGCAGCATCCCGAAGCAGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SVCWGPGTLVQP*KRSAASRSSSC
Trigger: GCAGGAGCTGCTTCGGGATGCTGCAGAACGCTTCAAGGGCTGGACCAATGTGCCGGGGCCCCAGCACACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 90 bp CAAGCCAGCTCTGTGTGCTGGGGCCCCGGCACATTGGTCCAGCCCTaGAAGCGTTCTGCAGCATCCCGAAGCAGCTCCTGCACACTCTCC +
Preference number: 6 (lower is better)
Translates to: QASSVCWGPGTLVQP*KRSAASRSSSCTLS
Trigger: GGAGAGTGTGCAGGAGCTGCTTCGGGATGCTGCAGAACGCTTCAAGGGCTGGACCAATGTGCCGGGGCCCCAGCACACAGAGCTGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 72 bp GGAGCCCCGGCGCCCTTCATAGCCCCAGCACCTACTTaGCTGCCAATCTGCCAGGTGACGACCTTCATCTGG +
Preference number: 6 (lower is better)
Translates to: GAPAPFIAPAPT*LPICQVTTFIW
Trigger: CCAGATGAAGGTCGTCACCTGGCAGATTGGCAGTCAAGTAGGTGCTGGGGCTATGAAGGGCGCCGGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 72 bp TGCCCATCTGGTGCCTTCCTACAAGCCAGCTCTGTGTaGTGGGGCCCCGGCACATTGGTCCAGCCCTTGAAG +
Preference number: 6 (lower is better)
Translates to: CPSGAFLQASSV*WGPGTLVQPLK
Trigger: CTTCAAGGGCTGGACCAATGTGCCGGGGCCCCAGCACACAGAGCTGGCTTGTAGGAAGGCACCAGATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp CAGCTGGGTACAGCTCAGGCAAGTTGTCGTAAGTGCTaGCATGGCTGCCTGTGGAACCACAGGAGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: QLGTAQASCRKC*HGCLWNHRSPG
Trigger: GCCGGGGCTCCTGTGGTTCCACAGGCAGCCATGCCAGCACTTACGACAACTTGCCTGAGCTGTACCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp CCATCTGGTGCCTTCCTACAAGCCAGCTCTGTGTGCTaGGGCCCCGGCACATTGGTCCAGCCCTTGAAGCGT +
Preference number: 6 (lower is better)
Translates to: PSGAFLQASSVC*GPGTLVQPLKR
Trigger: ACGCTTCAAGGGCTGGACCAATGTGCCGGGGCCCCAGCACACAGAGCTGGCTTGTAGGAAGGCACCAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp GATGCAGCACCACGGCTGGAGGGGCAGCCACTTCTGTaGATGCCTTCCACATTCGAAGCGGGTGCCCATCTG +
Preference number: 6 (lower is better)
Translates to: DAAPRLEGQPLL*MPSTFEAGAHL
Trigger: CAGATGGGCACCCGCTTCGAATGTGGAAGGCATCCACAGAAGTGGCTGCCCCTCCAGCCGTGGTGCTGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 72 bp CTACAAGCCAGCTCTGTGTGCTGGGGCCCCGGCACATaGGTCCAGCCCTTGAAGCGTTCTGCAGCATCCCGA +
Preference number: 6 (lower is better)
Translates to: LQASSVCWGPGT*VQPLKRSAASR
Trigger: TCGGGATGCTGCAGAACGCTTCAAGGGCTGGACCAATGTGCCGGGGCCCCAGCACACAGAGCTGGCTTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 72 bp ACAGCTCAGGCAAGTTGTCGTAAGTGCTGGCATGGCTaGCTGTGGAACCACAGGAGCCCCGGCGCCCTTCAT +
Preference number: 6 (lower is better)
Translates to: TAQASCRKCWHG*LWNHRSPGALH
Trigger: ATGAAGGGCGCCGGGGCTCCTGTGGTTCCACAGGCAGCCATGCCAGCACTTACGACAACTTGCCTGAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 72 bp GCTCAGCTGGGTACAGCTCAGGCAAGTTGTCGTAAGTaGTGGCATGGCTGCCTGTGGAACCACAGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: AQLGTAQASCRK*WHGCLWNHRSP
Trigger: GGGGCTCCTGTGGTTCCACAGGCAGCCATGCCAGCACTTACGACAACTTGCCTGAGCTGTACCCAGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp GCAGCACTTCTCGGTTCTCATCAGGGAGCAGCAAGGTaGCAGCTTGCGCCGCTGCCAGCCACTGTTCTTTGG +
Preference number: 6 (lower is better)
Translates to: AALLGSHQGAAR*QLAPLPATVLW
Trigger: CCAAAGAACAGTGGCTGGCAGCGGCGCAAGCTGCCACCTTGCTGCTCCCTGATGAGAACCGAGAAGTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 90 bp TTCTCACTCAGGTCCCTGGGGCCTGGCCGGCCAACCAGGCTGCGTTaGCTCTTGATCCTGGGTGAGGAGCTGTCCTTCTTGGAGACATTG +
Preference number: 6 (lower is better)
Translates to: FSLRSLGPGRPTRLR*LLILGEELSFLETL
Trigger: CAATGTCTCCAAGAAGGACAGCTCCTCACCCAGGATCAAGAGCAAACGCAGCCTGGTTGGCCGGCCAGGCCCCAGGGACCTGAGTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 72 bp ACCCTGGCTGAAGTGGTGACCCTGTTCTTGGCCCTGTaGAATCCAGCTGAGAGGAAGCCACGGCAAGTGCGG +
Preference number: 6 (lower is better)
Translates to: TLAEVVTLFLAL*NPAERKPRQVR
Trigger: CCGCACTTGCCGTGGCTTCCTCTCAGCTGGATTTCACAGGGCCAAGAACAGGGTCACCACTTCAGCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 72 bp ACACCTGAGTCACGACGTTCACGGGGTACTGATGCTTaGAGTCCTGCAGGGGCGTCTGCAGCATCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: TPESRRSRGTDA*SPAGASAASAS
Trigger: TGAGGCTGATGCTGCAGACGCCCCTGCAGGACTGCAAGCATCAGTACCCCGTGAACGTCGTGACTCAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 90 bp ACCAGGCTGCGTTTGCTCTTGATCCTGGGTGAGGAGCTGTCCTTCTaGGAGACATTGAGGTGGAAGATGGAAGGTGCCAGGCACACCGCC +
Preference number: 6 (lower is better)
Translates to: TRLRLLLILGEELSF*ETLRWKMEGARHTA
Trigger: GGCGGTGTGCCTGGCACCTTCCATCTTCCACCTCAATGTCTCCAAGAAGGACAGCTCCTCACCCAGGATCAAGAGCAAACGCAGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 72 bp CGGAATGTGGCTACAGGCCAAGCCTCCCAGGCTTTCTaGGTCTCACCATCTCTGACCCTGGCTGAAGTGGTG +
Preference number: 6 (lower is better)
Translates to: RNVATGQASQAF*VSPSLTLAEVV
Trigger: CACCACTTCAGCCAGGGTCAGAGATGGTGAGACTCAGAAAGCCTGGGAGGCTTGGCCTGTAGCCACATTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 72 bp GCCACTTCTGTGGATGCCTTCCACATTCGAAGCGGGTaGCCATCTGGTGCCTTCCTACAAGCCAGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: ATSVDAFHIRSG*PSGAFLQASSV
Trigger: CACAGAGCTGGCTTGTAGGAAGGCACCAGATGGGCACCCGCTTCGAATGTGGAAGGCATCCACAGAAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 72 bp GCAGTCGAGTTAGCTTCTTGCTCAAGATCCTGGGCCTaGGCTGGAGCCTCAGCCTCAGCCTGTACCAATGGT +
Preference number: 6 (lower is better)
Translates to: AVELASCSRSWA*AGASASACTNG
Trigger: ACCATTGGTACAGGCTGAGGCTGAGGCTCCAGCTCAGGCCCAGGATCTTGAGCAAGAAGCTAACTCGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 72 bp CAGGGGCGTCTGCAGCATCAGCCTCATTCATGGAGTTaGCACTACTGTCAAGCTCACTGGAGGAAACCGCTG +
Preference number: 6 (lower is better)
Translates to: QGRLQHQPHSWS*HYCQAHWRKPL
Trigger: CAGCGGTTTCCTCCAGTGAGCTTGACAGTAGTGGCAACTCCATGAATGAGGCTGATGCTGCAGACGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp GGAAGCCACGGCAAGTGCGGAAAGATGAAGCTTTGGTaGCCTTTTCCGAGGTGGCAAGGCATTGCTCGGGTT +
Preference number: 6 (lower is better)
Translates to: GSHGKCGKMKLW*PFPRWQGIARV
Trigger: AACCCGAGCAATGCCTTGCCACCTCGGAAAAGGCCACCAAAGCTTCATCTTTCCGCACTTGCCGTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp CTCCTCCTCTTCCTCCTTATCTCCAGGCCTCAGGTCTaGGTACATGGTCTGAGACCACAGCTCTACCCGTTG +
Preference number: 6 (lower is better)
Translates to: LLLFLLISRPQV*VHGLRPQLYPL
Trigger: CAACGGGTAGAGCTGTGGTCTCAGACCATGTACCCAGACCTGAGGCCTGGAGATAAGGAGGAAGAGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp GGCCTGAGCTGGAGCCTCAGCCTCAGCCTGTACCAATaGTTCGACCACATTTGGGGCCTGATCCAGAACAAT +
Preference number: 6 (lower is better)
Translates to: GLSWSLSLSLYQ*FDHIWGLIQNN
Trigger: ATTGTTCTGGATCAGGCCCCAAATGTGGTCGAACCATTGGTACAGGCTGAGGCTGAGGCTCCAGCTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp CGAGTTAGCTTCTTGCTCAAGATCCTGGGCCTGAGCTaGAGCCTCAGCCTCAGCCTGTACCAATGGTTCGAC +
Preference number: 6 (lower is better)
Translates to: RVSFLLKILGLS*SLSLSLYQWFD
Trigger: GTCGAACCATTGGTACAGGCTGAGGCTGAGGCTCCAGCTCAGGCCCAGGATCTTGAGCAAGAAGCTAACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 72 bp GGAGGCAGAAATTGGCTCTGCAGTCGAGTTAGCTTCTaGCTCAAGATCCTGGGCCTGAGCTGGAGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: GGRNWLCSRVSF*LKILGLSWSLS
Trigger: GCTGAGGCTCCAGCTCAGGCCCAGGATCTTGAGCAAGAAGCTAACTCGACTGCAGAGCCAATTTCTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 72 bp GCAGGGGCGTCTGCAGCATCAGCCTCATTCATGGAGTaGCCACTACTGTCAAGCTCACTGGAGGAAACCGCT +
Preference number: 6 (lower is better)
Translates to: AGASAASASFME*PLLSSSLEETA
Trigger: AGCGGTTTCCTCCAGTGAGCTTGACAGTAGTGGCAACTCCATGAATGAGGCTGATGCTGCAGACGCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 72 bp GCCACTTCCATGGCACACAAGTGCCCAAAGACTTTGTaGTACCAGTCAGGAGAACGGCCCCTGAGGTCAGCG +
Preference number: 6 (lower is better)
Translates to: ATSMAHKCPKTL*YQSGERPLRSA
Trigger: CGCTGACCTCAGGGGCCGTTCTCCTGACTGGTACAACAAAGTCTTTGGGCACTTGTGTGCCATGGAAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 90 bp TGCAGTCCTGCAGGGGCGTCTGCAGCATCAGCCTCATTCATGGAGTaGCCACTACTGTCAAGCTCACTGGAGGAAACCGCTGTGTCAGAA +
Preference number: 6 (lower is better)
Translates to: CSPAGASAASASFME*PLLSSSLEETAVSE
Trigger: TTCTGACACAGCGGTTTCCTCCAGTGAGCTTGACAGTAGTGGCAACTCCATGAATGAGGCTGATGCTGCAGACGCCCCTGCAGGACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 90 bp TCTCGGATCTTTGCCACTTCCATGGCACACAAGTGCCCAAAGACTTaGTTGTACCAGTCAGGAGAACGGCCCCTGAGGTCAGCGCGGCAA +
Preference number: 6 (lower is better)
Translates to: SRIFATSMAHKCPKT*LYQSGERPLRSARQ
Trigger: TTGCCGCGCTGACCTCAGGGGCCGTTCTCCTGACTGGTACAACAAAGTCTTTGGGCACTTGTGTGCCATGGAAGTGGCAAAGATCCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 72 bp CCAGGCTTTCTGAGTCTCACCATCTCTGACCCTGGCTaGAGTGGTGACCCTGTTCTTGGCCCTGTGAAATCC +
Preference number: 6 (lower is better)
Translates to: PGFLSLTISDPG*SGDPVLGPVKS
Trigger: GGATTTCACAGGGCCAAGAACAGGGTCACCACTTCAGCCAGGGTCAGAGATGGTGAGACTCAGAAAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 72 bp GGGCCTGATCCAGAACAATCAGTGGGACTTCCTCCTTaGCTTGGGTTGGGAACCCTCTGTGGGCTTGAGACT +
Preference number: 6 (lower is better)
Translates to: GPDPEQSVGLPP*LGLGTLCGLET
Trigger: AGTCTCAAGCCCACAGAGGGTTCCCAACCCAAGTCAAGGAGGAAGTCCCACTGATTGTTCTGGATCAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 72 bp GACAAAGGCTCTCAATGGACAGAGAACGAGGGAACGTaGCTGGCTTATGGTCCCCAGGCACATGCACCAGAT +
Preference number: 6 (lower is better)
Translates to: DKGSQWTENEGT*LAYGPQAHAPD
Trigger: ATCTGGTGCATGTGCCTGGGGACCATAAGCCAGGCACGTTCCCTCGTTCTCTGTCCATTGAGAGCCTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp TGTCAAGCTCACTGGAGGAAACCGCTGTGTCAGAAATaGAATGCCCTTCCTCCACAGACAGGCTGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: CQAHWRKPLCQK*NALPPQTGWRQ
Trigger: CTGCCTCCAGCCTGTCTGTGGAGGAAGGGCATTCCATTTCTGACACAGCGGTTTCCTCCAGTGAGCTTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp CCAGACTTGCGAAAGATGCCCACCTGGTCTAGGCACTaGCTTCGTAGGTATCGCATAGCTTGCTGGATGCTC +
Preference number: 6 (lower is better)
Translates to: PDLRKMPTWSRH*LRRYRIACWML
Trigger: GAGCATCCAGCAAGCTATGCGATACCTACGAAGCCAGTGCCTAGACCAGGTGGGCATCTTTCGCAAGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp TCAGAGCTTTGTTTCCGGGCCAGCTGCCTGAAGGGTTaGGAAAGAGTCTCGGATCTTTGCCACTTCCATGGC +
Preference number: 6 (lower is better)
Translates to: SELCFRASCLKG*ERVSDLCHFHG
Trigger: GCCATGGAAGTGGCAAAGATCCGAGACTCTTTCCCAACCCTTCAGGCAGCTGGCCCGGAAACAAAGCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 90 bp CGGATCTTTGCCACTTCCATGGCACACAAGTGCCCAAAGACTTTGTaGTACCAGTCAGGAGAACGGCCCCTGAGGTCAGCGCGGCAAATA +
Preference number: 6 (lower is better)
Translates to: RIFATSMAHKCPKTL*YQSGERPLRSARQI
Trigger: TATTTGCCGCGCTGACCTCAGGGGCCGTTCTCCTGACTGGTACAACAAAGTCTTTGGGCACTTGTGTGCCATGGAAGTGGCAAAGATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 72 bp CAAAATCACGGCAAGGATGAGGTGCCATGCTGTCAGTaGCATAGTGGTACAGCTCCACACCTGGCATCAGGG +
Preference number: 6 (lower is better)
Translates to: QNHGKDEVPCCQ*HSGTAPHLASG
Trigger: CCCTGATGCCAGGTGTGGAGCTGTACCACTATGTCACTGACAGCATGGCACCTCATCCTTGCCGTGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 72 bp TTTTCCGAGGTGGCAAGGCATTGCTCGGGTTCTGTCTaGCGGCTGTCACCCTTTTCTTTCCTCCTCAGAGAT +
Preference number: 6 (lower is better)
Translates to: FSEVARHCSGSV*RLSPFSFLLRD
Trigger: ATCTCTGAGGAGGAAAGAAAAGGGTGACAGCCGGCAGACAGAACCCGAGCAATGCCTTGCCACCTCGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp CCAGGTGACGACCTTCATCTGGACAAAGGCTCTCAATaGACAGAGAACGAGGGAACGTGCCTGGCTTATGGT +
Preference number: 6 (lower is better)
Translates to: PGDDLHLDKGSQ*TENEGTCLAYG
Trigger: ACCATAAGCCAGGCACGTTCCCTCGTTCTCTGTCCATTGAGAGCCTTTGTCCAGATGAAGGTCGTCACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp CTCAGCCTCAGCCTGTACCAATGGTTCGACCACATTTaGGGCCTGATCCAGAACAATCAGTGGGACTTCCTC +
Preference number: 6 (lower is better)
Translates to: LSLSLYQWFDHI*GLIQNNQWDFL
Trigger: GAGGAAGTCCCACTGATTGTTCTGGATCAGGCCCCAAATGTGGTCGAACCATTGGTACAGGCTGAGGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp AGTTTCTTGCAGTCACTGATCATGTGTGATAGGCCTTaGGTGGCAGCCATGTTCTCACTCAGGTCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: SFLQSLIMCDRP*VAAMFSLRSLG
Trigger: CCCCAGGGACCTGAGTGAGAACATGGCTGCCACCCAAGGCCTATCACACATGATCAGTGACTGCAAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 72 bp CTGATCCAGAACAATCAGTGGGACTTCCTCCTTGACTaGGGTTGGGAACCCTCTGTGGGCTTGAGACTCTGC +
Preference number: 6 (lower is better)
Translates to: LIQNNQWDFLLD*GWEPSVGLRLC
Trigger: GCAGAGTCTCAAGCCCACAGAGGGTTCCCAACCCAAGTCAAGGAGGAAGTCCCACTGATTGTTCTGGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 72 bp CCTCAGCCTCAGCCTGTACCAATGGTTCGACCACATTaGGGGCCTGATCCAGAACAATCAGTGGGACTTCCT +
Preference number: 6 (lower is better)
Translates to: PQPQPVPMVRPH*GPDPEQSVGLP
Trigger: AGGAAGTCCCACTGATTGTTCTGGATCAGGCCCCAAATGTGGTCGAACCATTGGTACAGGCTGAGGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 72 bp CCTGCAAACTGCCTGTTGATCTCCAGTGACTCTGAGTaGAGGCTAGGTCGGTGGGAATTCTGGAAGCTGTGC +
Preference number: 6 (lower is better)
Translates to: PANCLLISSDSE*RLGRWEFWKLC
Trigger: GCACAGCTTCCAGAATTCCCACCGACCTAGCCTCAACTCAGAGTCACTGGAGATCAACAGGCAGTTTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 90 bp TTTCCGGGCCAGCTGCCTGAAGGGTTGGGAAAGAGTCTCGGATCTTaGCCACTTCCATGGCACACAAGTGCCCAAAGACTTTGTTGTACC +
Preference number: 6 (lower is better)
Translates to: FPGQLPEGLGKSLGS*PLPWHTSAQRLCCT
Trigger: GGTACAACAAAGTCTTTGGGCACTTGTGTGCCATGGAAGTGGCAAAGATCCGAGACTCTTTCCCAACCCTTCAGGCAGCTGGCCCGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 72 bp AGCTCACTGGAGGAAACCGCTGTGTCAGAAATGGAATaGCCTTCCTCCACAGACAGGCTGGAGGCAGAAATT +
Preference number: 6 (lower is better)
Translates to: SSLEETAVSEME*PSSTDRLEAEI
Trigger: AATTTCTGCCTCCAGCCTGTCTGTGGAGGAAGGGCATTCCATTTCTGACACAGCGGTTTCCTCCAGTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CCA 72 bp ATGCCCTTCCTCCACAGACAGGCTGGAGGCAGAAATTaGCTCTGCAGTCGAGTTAGCTTCTTGCTCAAGATC +
Preference number: 6 (lower is better)
Translates to: MPFLHRQAGGRN*LCSRVSFLLKI
Trigger: GATCTTGAGCAAGAAGCTAACTCGACTGCAGAGCCAATTTCTGCCTCCAGCCTGTCTGTGGAGGAAGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 72 bp TTTGCCACTTCCATGGCACACAAGTGCCCAAAGACTTaGTTGTACCAGTCAGGAGAACGGCCCCTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: FATSMAHKCPKT*LYQSGERPLRS
Trigger: TGACCTCAGGGGCCGTTCTCCTGACTGGTACAACAAAGTCTTTGGGCACTTGTGTGCCATGGAAGTGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 72 bp CAGCTGCCTGAAGGGTTGGGAAAGAGTCTCGGATCTTaGCCACTTCCATGGCACACAAGTGCCCAAAGACTT +
Preference number: 6 (lower is better)
Translates to: QLPEGLGKSLGS*PLPWHTSAQRL
Trigger: AAGTCTTTGGGCACTTGTGTGCCATGGAAGTGGCAAAGATCCGAGACTCTTTCCCAACCCTTCAGGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 90 bp TTGATCTGGCCTGCAAACTGCCTGTTGATCTCCAGTGACTCTGAGTaGAGGCTAGGTCGGTGGGAATTCTGGAAGCTGTGCCAACGAAGT +
Preference number: 6 (lower is better)
Translates to: LIWPANCLLISSDSE*RLGRWEFWKLCQRS
Trigger: ACTTCGTTGGCACAGCTTCCAGAATTCCCACCGACCTAGCCTCAACTCAGAGTCACTGGAGATCAACAGGCAGTTTGCAGGCCAGATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS GCA 72 bp GAGTCTCGGATCTTTGCCACTTCCATGGCACACAAGTaGCCAAAGACTTTGTTGTACCAGTCAGGAGAACGG +
Preference number: 6 (lower is better)
Translates to: ESRIFATSMAHK*PKTLLYQSGER
Trigger: CCGTTCTCCTGACTGGTACAACAAAGTCTTTGGGCACTTGTGTGCCATGGAAGTGGCAAAGATCCGAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS TCA 72 bp CCAGTGGCTGCTAATGGTGCATTGCTCCTCCTCTTCTaGGTCGTCATCCTGCTTGCATTGAAAATGAACCTC +
Preference number: 6 (lower is better)
Translates to: PVAANGALLLLF*VVILLALKMNL
Trigger: GAGGTTCATTTTCAATGCAAGCAGGATGACGACTCAGAAGAGGAGGAGCAATGCACCATTAGCAGCCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036606.14
ENSMUST00000149999.8
CDS CCA 72 bp CCTCATTCATGGAGTTGCCACTACTGTCAAGCTCACTaGAGGAAACCGCTGTGTCAGAAATGGAATGCCCTT +
Preference number: 6 (lower is better)
Translates to: PHSWSCHYCQAH*RKPLCQKWNAL
Trigger: AAGGGCATTCCATTTCTGACACAGCGGTTTCCTCCAGTGAGCTTGACAGTAGTGGCAACTCCATGAATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14
CDS CAA 72 bp TTCATAAACTTGGGCATTGACCATACCCAGGCCTGTTaGTGGGGTACAGTGTACTTCTCCATGAAGCCAGTG +
Preference number: 6 (lower is better)
Translates to: FINLGIDHTQAC*WGTVYFSMKPV
Trigger: CACTGGCTTCATGGAGAAGTACACTGTACCCCACAAACAGGCCTGGGTATGGTCAATGCCCAAGTTTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036606.14