Pregenerated sensors for STARD7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027367Ensembl transcript IDs: ENSMUST00000110374.2, ENSMUST00000110375.9, ENSMUST00000125049.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTCCCAGCAAATGGGCTAAGGCTACGGCAGAGGCCATGACACAGTaGGCACAGCCCATGAAAACAGAAAGGCCAGTTAAGATGAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: APSKWAKATAEAMTQ*AQPMKTERPVKMKA Trigger: AGCTTTCATCTTAACTGGCCTTTCTGTTTTCATGGGCTGTGCTCACTGTGTCATGGCCTCTGCCGTAGCCTTAGCCCATTTGCTGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR GCA 90 bp | AGAGGTTGTTCCAGAGTAGGTAAGCACGATACTGGATTTCACAACTaGTGGCCTGAGAACATGACAACTCCACAATGTCATGCTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: RGCSRVGKHDTGFHN*WPENMTTPQCHAPL Trigger: CAGAGGAGCATGACATTGTGGAGTTGTCATGTTCTCAGGCCAGCAGTTGTGAAATCCAGTATCGTGCTTACCTACTCTGGAACAACCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR GCA 90 bp | AGCCCAGGCAGGCCTCAAATTCATAGAGATTCATCCACCTGCCTCTaGTTCCTAAGTGCTAGAATTAAAGGTATGTGCCATCACACCCAA | + |
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Preference number: 1 (lower is better) Translates to: SPGRPQIHRDSSTCL*FLSARIKGMCHHTQ Trigger: TTGGGTGTGATGGCACATACCTTTAATTCTAGCACTTAGGAAGCAGAGGCAGGTGGATGAATCTCTATGAATTTGAGGCCTGCCTGGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
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| 3UTR CCA 90 bp | AGAACTGAAGGATATCCAGAGCATTGCATAACCAACAGTGGCATTTaGAATGTCAGCAAGGAAGCTTCTCGTAGGAGGCGGATAGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: RTEGYPEHCITNSGI*NVSKEASRRRRIGV Trigger: GACTCCTATCCGCCTCCTACGAGAAGCTTCCTTGCTGACATTCCAAATGCCACTGTTGGTTATGCAATGCTCTGGATATCCTTCAGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR CCA 90 bp | TGTTGGCCCATATGTCAGCTTACAGTTTTGAAAACTCTGAGGAAATaGCACAACCACCATCTACCACCTTTATCCTTCCAGGACAGCGCA | + |
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Preference number: 1 (lower is better) Translates to: CWPICQLTVLKTLRK*HNHHLPPLSFQDSA Trigger: TGCGCTGTCCTGGAAGGATAAAGGTGGTAGATGGTGGTTGTGCCATTTCCTCAGAGTTTTCAAAACTGTAAGCTGACATATGGGCCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR GCA 90 bp | ATGTATAGCCCAGGCAGGCCTCAAATTCATAGAGATTCATCCACCTaGCTCTGCTTCCTAAGTGCTAGAATTAAAGGTATGTGCCATCAC | + |
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Preference number: 1 (lower is better) Translates to: MYSPGRPQIHRDSST*LCFLSARIKGMCHH Trigger: GTGATGGCACATACCTTTAATTCTAGCACTTAGGAAGCAGAGGCAGGTGGATGAATCTCTATGAATTTGAGGCCTGCCTGGGCTATACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
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| 3UTR CCA 90 bp | CATCTACCACCTTTATCCTTCCAGGACAGCGCAGTCAATCTGCAGTaGGAAAATAGTGCCAAAACAAACAAGACTAAGGGAAGAGTTGTG | + |
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Preference number: 1 (lower is better) Translates to: HLPPLSFQDSAVNLQ*ENSAKTNKTKGRVV Trigger: CACAACTCTTCCCTTAGTCTTGTTTGTTTTGGCACTATTTTCCCACTGCAGATTGACTGCGCTGTCCTGGAAGGATAAAGGTGGTAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR GCA 90 bp | TATCCAAACTGTGTCTATTACTTCTATGTCAGCTCTGGAGAGAAATaGTTTACAAGACCAAGAGGTCACAAAAGCCCCATCCCTACCATA | + |
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Preference number: 1 (lower is better) Translates to: YPNCVYYFYVSSGEK*FTRPRGHKSPIPTI Trigger: TATGGTAGGGATGGGGCTTTTGTGACCTCTTGGTCTTGTAAAGCATTTCTCTCCAGAGCTGACATAGAAGTAATAGACACAGTTTGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR CCA 90 bp | GTTGTGATCTTATCCAAACTGTGTCTATTACTTCTATGTCAGCTCTaGAGAGAAATGCTTTACAAGACCAAGAGGTCACAAAAGCCCCAT | + |
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Preference number: 1 (lower is better) Translates to: VVILSKLCLLLLCQL*REMLYKTKRSQKPH Trigger: ATGGGGCTTTTGTGACCTCTTGGTCTTGTAAAGCATTTCTCTCCAGAGCTGACATAGAAGTAATAGACACAGTTTGGATAAGATCACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAGCAAGGAAGCTTCTCGTAGGAGGCGGATAGGAGTCATCTCCTTCTGGCCTGACTTGTCCCTGTCCTaGAGCAGAGCTGAAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: VSKEASRRRRIGVISFWPDLSLS*SRAEGA Trigger: TGCTCCTTCAGCTCTGCTGCAGGACAGGGACAAGTC...AGGCCAGAAGGAGATGACTCCTATCCGCCTCCTACGAGAAGCTTCCTTGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR GCA 90 bp | CACAACCACCATCTACCACCTTTATCCTTCCAGGACAGCGCAGTCAATCTGCAGGACTTGTCCCTGTCCTaGAGCAGAGCTGAAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: HNHHLPPLSFQDSAVNLQDLSLS*SRAEGA Trigger: TGCTCCTTCAGCTCTGCTGCAGGACAGGGACAAGTC...CTGCAGATTGACTGCGCTGTCCTGGAAGGATAAAGGTGGTAGATGGTGGTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR TCA 90 bp | CACAACCACCATCTACCACCTTTATCCTTCCAGGACAGCGCAGTCAATCTGCAGTCACAACTGCTGGCCTaGGAACATGACAACTCCACA | + |
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Preference number: 2 (lower is better) Translates to: HNHHLPPLSFQDSAVNLQSQLLA*EHDNST Trigger: TGTGGAGTTGTCATGTTCTCAGGCCAGCAGTTGTGA...CTGCAGATTGACTGCGCTGTCCTGGAAGGATAAAGGTGGTAGATGGTGGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR TCA 90 bp | AATGCCACTCTCTGCTCTGCCAACAACCGAAAAGACAGAAACACTGGGGAGTTAGAGGCCATGACACAGTaGGCACAGCCCATGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: NATLCSANNRKDRNTGELEAMTQ*AQPMKT Trigger: TGTTTTCATGGGCTGTGCTCACTGTGTCATGGCCTC...TAACTCCCCAGTGTTTCTGTCTTTTCGGTTGTTGGCAGAGCAGAGAGTGGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCCTGAGAACATGACAACTCCACAATGTCATGCTCCTCTGTTTGGTAAAGAGGGAGCAAGGCAGGGCTaGAAGTGCCTGTCTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: WPENMTTPQCHAPLFGKEGARQG*KCLSFL Trigger: AAGGAAAGACAGGCACTTCCAGCCCTGCCTTGCTCC...CTCTTTACCAAACAGAGGAGCATGACATTGTGGAGTTGTCATGTTCTCAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR TCA 90 bp | CAATGTCATGGTAGTCTGCAGGGGGAAGGATCCCTTGGTACAAACTTCATGTCTGCTGGCCTGAGAACATaGCAACTCCACAATGTCATG | + |
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Preference number: 2 (lower is better) Translates to: QCHGSLQGEGSLGTNFMSAGLRT*QLHNVM Trigger: CATGACATTGTGGAGTTGTCATGTTCTCAGGCCAGC...AGACATGAAGTTTGTACCAAGGGATCCTTCCCCCTGCAGACTACCATGACATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTGAGAACATGACAACTCCACAATGTCATGCTCCTCTGTTTGGTAAAGAGAGGCAGGGCTGGAAGTaGCTGTCTTTCCTTATCCCA | + |
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Preference number: 2 (lower is better) Translates to: WPENMTTPQCHAPLFGKERQGWK*LSFLIP Trigger: TGGGATAAGGAAAGACAGGCACTTCCAGCCCTGCCT...CTCTTTACCAAACAGAGGAGCATGACATTGTGGAGTTGTCATGTTCTCAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGCTCTGGAGAGAAATGCTTTACAAGACCAAGAGGTCACAAAAGCCCCATAGGCAGGGCTGGAAGTaGCTGTCTTTCCTTATCCCA | + |
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Preference number: 2 (lower is better) Translates to: CQLWREMLYKTKRSQKPHRQGWK*LSFLIP Trigger: TGGGATAAGGAAAGACAGGCACTTCCAGCCCTGCCT...ATGGGGCTTTTGTGACCTCTTGGTCTTGTAAAGCATTTCTCTCCAGAGCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR GCA 90 bp | CACAACCACCATCTACCACCTTTATCCTTCCAGGACAGCGCAGTCAATCTGCAGACTGGATTTCACAACTaGTGGCCTGAGAACATGACA | + |
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Preference number: 2 (lower is better) Translates to: HNHHLPPLSFQDSAVNLQTGFHN*WPENMT Trigger: TGTCATGTTCTCAGGCCAGCAGTTGTGAAATCCAGT...CTGCAGATTGACTGCGCTGTCCTGGAAGGATAAAGGTGGTAGATGGTGGTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGCTCTGGAGAGAAATGCTTTACAAGACCAAGAGGTCACAAAAGCCCCATAGAGGAGTTTGTCTCTaGTGCTCCCAGCAAATGGGC | + |
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Preference number: 2 (lower is better) Translates to: CQLWREMLYKTKRSQKPHRGVCL*CSQQMG Trigger: GCCCATTTGCTGGGAGCACCAGAGACAAACTCCTCT...ATGGGGCTTTTGTGACCTCTTGGTCTTGTAAAGCATTTCTCTCCAGAGCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCAGCTCTGGAGAGAAATGCTTTACAAGACCAAGAGGTCACAAAAGCCCCATTCACAACTGCTGGCCTaGGAACATGACAACTCCACA | + |
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Preference number: 2 (lower is better) Translates to: CQLWREMLYKTKRSQKPHSQLLA*EHDNST Trigger: TGTGGAGTTGTCATGTTCTCAGGCCAGCAGTTGTGA...ATGGGGCTTTTGTGACCTCTTGGTCTTGTAAAGCATTTCTCTCCAGAGCTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR TCA 90 bp | AATGCCACTCTCTGCTCTGCCAACAACCGAAAAGACAGAAACACTGGGGAGTTAAAAGGCCAGTTAAGATaGAAGCTGCCTCCACCAGAT | + |
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Preference number: 2 (lower is better) Translates to: NATLCSANNRKDRNTGELKGQLR*KLPPPD Trigger: ATCTGGTGGAGGCAGCTTTCATCTTAACTGGCCTTT...TAACTCCCCAGTGTTTCTGTCTTTTCGGTTGTTGGCAGAGCAGAGAGTGGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGAGTGAGCACAGCCCATaGAAACAGAAAGGCCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQSEHSP*KQKGQL Trigger: TAACTGGCCTTTCTGTTTTCATGGGCTGTGCTCACT...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGTGCACACTTCCACTGATCCTATCAAAACACTGATGACATCATTTAGGAAGCTACGGCAGAGGCCATaGCACAGTGAGCACAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: FVHTSTDPIKTLMTSFRKLRQRP*HSEHSP Trigger: TGGGCTGTGCTCACTGTGTCATGGCCTCTGCCGTAG...CTTCCTAAATGATGTCATCAGTGTTTTGATAGGATCAGTGGAAGTGTGCACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGCAGTGACCTACAGAACTaGAGGATATCCAGAGCATTG | + |
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Preference number: 2 (lower is better) Translates to: SQITKQRVNVTAQSLSPSSDLQN*RISRAL Trigger: CAATGCTCTGGATATCCTTCAGTTCTGTAGGTCACT...GCTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCAGCTCTGGAGAGAAATGCTTTACAAGACCAAGAGGTCACAAAAGCCCCATAGTGAGCACAGCCCATaGAAACAGAAAGGCCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: CQLWREMLYKTKRSQKPHSEHSP*KQKGQL Trigger: TAACTGGCCTTTCTGTTTTCATGGGCTGTGCTCACT...ATGGGGCTTTTGTGACCTCTTGGTCTTGTAAAGCATTTCTCTCCAGAGCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGCACCAACAGTGGCATTTaGAATGTCAGCAAGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: SQITKQRVNVTAQSLSPSTNSGI*NVSKEA Trigger: AGCTTCCTTGCTGACATTCCAAATGCCACTGTTGGT...GCTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR CCA 90 bp | CAATGTCATGGTAGTCTGCAGGGGGAAGGATCCCTTGGTACAAACTTCATGTCTACCAACAGTGGCATTTaGAATGTCAGCAAGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: QCHGSLQGEGSLGTNFMSTNSGI*NVSKEA Trigger: AGCTTCCTTGCTGACATTCCAAATGCCACTGTTGGT...AGACATGAAGTTTGTACCAAGGGATCCTTCCCCCTGCAGACTACCATGACATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGTTTCCTGTCAGGTCCTaGGAAGAAGGGAAAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQFPVRS*EEGKNA Trigger: AGCATTTTTCCCTTCTTCCCAGGACCTGACAGGAAA...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGGGGAGAACAATAGAACACACGTGATAGGGAAGTTGGCCAGGGTTACTGATTTCTATGTGGCACTTTaGGAGATCTCACCTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: RGENNRTHVIGKLARVTDFYVAL*EISPSP Trigger: AGGAGAAGGTGAGATCTCCCAAAGTGCCACATAGAA...ATCAGTAACCCTGGCCAACTTCCCTATCACGTGTGTTCTATTGTTCTCCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGCTCTGGAGAGAAATGCTTTACAAGACCAAGAGGTCACAAAAGCCCCATACTGGATTTCACAACTaGTGGCCTGAGAACATGACA | + |
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Preference number: 2 (lower is better) Translates to: CQLWREMLYKTKRSQKPHTGFHN*WPENMT Trigger: TGTCATGTTCTCAGGCCAGCAGTTGTGAAATCCAGT...ATGGGGCTTTTGTGACCTCTTGGTCTTGTAAAGCATTTCTCTCCAGAGCTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR GCA 90 bp | AATGCCACTCTCTGCTCTGCCAACAACCGAAAAGACAGAAACACTGGGGAGTTAAGCTCTGGAGAGAAATaGTTTACAAGACCAAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: NATLCSANNRKDRNTGELSSGEK*FTRPRG Trigger: ACCTCTTGGTCTTGTAAAGCATTTCTCTCCAGAGCT...TAACTCCCCAGTGTTTCTGTCTTTTCGGTTGTTGGCAGAGCAGAGAGTGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTTTGTGCACACTTCCACTGATCCTATCAAAACACTGATGACATCATTTAGGGGAGCAAGGCAGGGCTaGAAGTGCCTGTCTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: CFVHTSTDPIKTLMTSFRGARQG*KCLSFL Trigger: AAGGAAAGACAGGCACTTCCAGCCCTGCCTTGCTCC...CCTAAATGATGTCATCAGTGTTTTGATAGGATCAGTGGAAGTGTGCACAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGGCAGTCAATCTGCAGTaGGAAAATAGTGCCAAAACA | + |
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Preference number: 2 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQAVNLQ*ENSAKT Trigger: TGTTTTGGCACTATTTTCCCACTGCAGATTGACTGC...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGCTTGCATAACCAACAGTaGCATTTGGAATGTCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SQITKQRVNVTAQSLSPSLHNQQ*HLECQQ Trigger: TTGCTGACATTCCAAATGCCACTGTTGGTTATGCAA...GCTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGCTCTGGAGAGAAATGCTTTACAAGACCAAGAGGTCACAAAAGCCCCATGCAGTCAATCTGCAGTaGGAAAATAGTGCCAAAACA | + |
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Preference number: 2 (lower is better) Translates to: CQLWREMLYKTKRSQKPHAVNLQ*ENSAKT Trigger: TGTTTTGGCACTATTTTCCCACTGCAGATTGACTGC...ATGGGGCTTTTGTGACCTCTTGGTCTTGTAAAGCATTTCTCTCCAGAGCTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR CCA 90 bp | AATTTGAAAATGGAAGTATCCCAGGCGGTGGTGGCACATGCCTTTAATCCCAGCAAAGAAAGTTCTATGTaGCACTTTGGGAGATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: NLKMEVSQAVVAHAFNPSKESSM*HFGRSH Trigger: GTGAGATCTCCCAAAGTGCCACATAGAACTTTCTTT...GCTGGGATTAAAGGCATGTGCCACCACCGCCTGGGATACTTCCATTTTCAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTGAGAACATGACAACTCCACAATGTCATGCTCCTCTGTTTGGTAAAGAGAGTTCTAAATCCTCTTaGACTGACAGTTACAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: WPENMTTPQCHAPLFGKESSKSS*TDSYSR Trigger: TCTGCTGTAACTGTCAGTGCAAGAGGATTTAGAACT...CTCTTTACCAAACAGAGGAGCATGACATTGTGGAGTTGTCATGTTCTCAGGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTTGTGCACACTTCCACTGATCCTATCAAAACACTGATGACATCATTTAGGAATGTCATGGTAGTCTaGAGGGGGAAGGATCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: CFVHTSTDPIKTLMTSFRNVMVV*RGKDPL Trigger: CAAGGGATCCTTCCCCCTGCAGACTACCATGACATT...CCTAAATGATGTCATCAGTGTTTTGATAGGATCAGTGGAAGTGTGCACAAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGTTAACTGTACAGAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAACTGGGGCTTCTCAATaGCACTCTCTGCTCTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: QVNCTESNHKTKGKRNCSTGASQ*HSLLCQ Trigger: TTGGCAGAGCAGAGAGTGGCATTGAGAAGCCCCAGT...TGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTCTGTACAGTTAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGTTAACTGTACAGAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAAGAGGAGTTTGTCTCTaGTGCTCCCAGCAAATGGGC | + |
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Preference number: 2 (lower is better) Translates to: QVNCTESNHKTKGKRNCSRGVCL*CSQQMG Trigger: GCCCATTTGCTGGGAGCACCAGAGACAAACTCCTCT...TGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTCTGTACAGTTAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGTTAACTGTACAGAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGCTGGCCTGAGAACATaGCAACTCCACAATGTCATG | + |
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Preference number: 2 (lower is better) Translates to: QVNCTESNHKTKGKRNCSAGLRT*QLHNVM Trigger: CATGACATTGTGGAGTTGTCATGTTCTCAGGCCAGC...TGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTCTGTACAGTTAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTGTGCACACTTCCACTGATCCTATCAAAACACTGATGACATCATTTAGGCAACCACTCTCCAAGTaGCCTACAGAACTGAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: CFVHTSTDPIKTLMTSFRQPLSK*PTELKD Trigger: ATCCTTCAGTTCTGTAGGTCACTTGGAGAGTGGTTG...CCTAAATGATGTCATCAGTGTTTTGATAGGATCAGTGGAAGTGTGCACAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGTGCACACTTCCACTGATCCTATCAAAACACTGATGACATCATTTAGGAAGCAACCACTCTCCAAGTaGCCTACAGAACTGAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: FVHTSTDPIKTLMTSFRKQPLSK*PTELKD Trigger: ATCCTTCAGTTCTGTAGGTCACTTGGAGAGTGGTTG...CTTCCTAAATGATGTCATCAGTGTTTTGATAGGATCAGTGGAAGTGTGCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAATTACATTAAGCAAGGTAACAGACTCAGAAAGACAATGTCACATTCTCTTTAATCCCAGCACTTaGGAGGCAAAGGGAGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LEITLSKVTDSERQCHILFNPST*EAKGGG Trigger: TCCACCTCCCTTTGCCTCCCAAGTGCTGGGATTAAA...GAGAATGTGACATTGTCTTTCTGAGTCTGTTACCTTGCTTAATGTAATTTCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAAATTACATTAAGCAAGGTAACAGACTCAGAAAGACAATGTCACATTCTCATTATCCCAGGCGGTGGTaGCACATGCCTTTAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: GNYIKQGNRLRKTMSHSHYPRRW*HMPLIP Trigger: TGGGATTAAAGGCATGTGCCACCACCGCCTGGGATA...ATGAGAATGTGACATTGTCTTTCTGAGTCTGTTACCTTGCTTAATGTAATTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAGTTAACTGTACAGAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCATCCTTGGCACAGAACTaGATAGGCAACAGAAGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: QVNCTESNHKTKGKRNCSSLAQN*IGNRRL Trigger: TAACCTTCTGTTGCCTATTCAGTTCTGTGCCAAGGA...TGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTCTGTACAGTTAACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGGAAATTACATTAAGCAAGGTAACAGACTCAGAAAGACAATGTCACATTCTCTGCATATCTTATATATaGAGGTGTGAGCACAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: LEITLSKVTDSERQCHILCISYI*RCEHRH Trigger: ATGTCTGTGCTCACACCTTCATATATAAGATATGCA...GAGAATGTGACATTGTCTTTCTGAGTCTGTTACCTTGCTTAATGTAATTTCCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| 3UTR TCA 72 bp | ATCCCAGCACTTGGGAGGCAAAGGGAGGTGGATTTCTaGGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: IPALGRQREVDF*VRGQPGLQSEF Trigger: GAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTCCCTTTGCCTCCCAAGTGCTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| 3UTR TCA 72 bp | CCAGGGGCCAACCACTCTCCAAGTGACCTACAGAACTaGAGGATATCCAGAGCATTGCATAACCAACAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PGANHSPSDLQN*RISRALHNQQW Trigger: CCACTGTTGGTTATGCAATGCTCTGGATATCCTTCAGTTCTGTAGGTCACTTGGAGAGTGGTTGGCCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR TCA 72 bp | AAATGGGCTAAGGCTACGGCAGAGGCCATGACACAGTaGGCACAGCCCATGAAAACAGAAAGGCCAGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: KWAKATAEAMTQ*AQPMKTERPVK Trigger: CTTAACTGGCCTTTCTGTTTTCATGGGCTGTGCTCACTGTGTCATGGCCTCTGCCGTAGCCTTAGCCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR TCA 72 bp | CACTTAGTGAGAACCAGGGGCCAACCACTCTCCAAGTaGCCTACAGAACTGAAGGATATCCAGAGCATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HLVRTRGQPLSK*PTELKDIQSIA Trigger: TGCAATGCTCTGGATATCCTTCAGTTCTGTAGGTCACTTGGAGAGTGGTTGGCCCCTGGTTCTCACTAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR CCA 72 bp | GGATATCCAGAGCATTGCATAACCAACAGTGGCATTTaGAATGTCAGCAAGGAAGCTTCTCGTAGGAGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: GYPEHCITNSGI*NVSKEASRRRR Trigger: CCGCCTCCTACGAGAAGCTTCCTTGCTGACATTCCAAATGCCACTGTTGGTTATGCAATGCTCTGGATATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGCCACTCTCTGCTCTGCCAACAACCGAAAAGACAGAAACACTGGGGAGTTATTAGCTCAGCCAGAATaGTTCACACCACCACAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: NATLCSANNRKDRNTGELLAQPE*FTPPQD Trigger: GTCCTGTGGTGGTGTGAACAATTCTGGCTGAGCTAA...TAACTCCCCAGTGTTTCTGTCTTTTCGGTTGTTGGCAGAGCAGAGAGTGGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGGCAAGACTCCATCTGTaGGCCCATATGTCAGCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQARLHL*AHMSAY Trigger: GTAAGCTGACATATGGGCCAACAGATGGAGTCTTGC...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGCGCAAGACTCCATCTGTaGGCCCATATGTCAGCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SQITKQRVNVTAQSLSPSARLHL*AHMSAY Trigger: GTAAGCTGACATATGGGCCAACAGATGGAGTCTTGC...GCTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGAACCAACAGTGGCATTaGGAATGTCAGCAAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQNQQWH*ECQQGS Trigger: GCTTCCTTGCTGACATTCCAAATGCCACTGTTGGTT...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR GCA 72 bp | TCCAGAGTAGGTAAGCACGATACTGGATTTCACAACTaGTGGCCTGAGAACATGACAACTCCACAATGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SRVGKHDTGFHN*WPENMTTPQCH Trigger: ATGACATTGTGGAGTTGTCATGTTCTCAGGCCAGCAGTTGTGAAATCCAGTATCGTGCTTACCTACTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR GCA 72 bp | CCAGGCAGGCCTCAAATTCATAGAGATTCATCCACCTaGCTCTGCTTCCTAAGTGCTAGAATTAAAGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: PGRPQIHRDSST*LCFLSARIKGM Trigger: CATACCTTTAATTCTAGCACTTAGGAAGCAGAGGCAGGTGGATGAATCTCTATGAATTTGAGGCCTGCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| 3UTR CCA 72 bp | AGAGTAGGTAAGCACGATACTGGATTTCACAACTGCTaGCCTGAGAACATGACAACTCCACAATGTCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: RVGKHDTGFHNC*PENMTTPQCHA Trigger: AGCATGACATTGTGGAGTTGTCATGTTCTCAGGCCAGCAGTTGTGAAATCCAGTATCGTGCTTACCTACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR CCA 72 bp | CCTTTATCCTTCCAGGACAGCGCAGTCAATCTGCAGTaGGAAAATAGTGCCAAAACAAACAAGACTAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PLSFQDSAVNLQ*ENSAKTNKTKG Trigger: TCCCTTAGTCTTGTTTGTTTTGGCACTATTTTCCCACTGCAGATTGACTGCGCTGTCCTGGAAGGATAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR CCA 72 bp | CCCTACCATACTGGTATTGGGCAAGACTCCATCTGTTaGCCCATATGTCAGCTTACAGTTTTGAAAACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PYHTGIGQDSIC*PICQLTVLKTL Trigger: CAGAGTTTTCAAAACTGTAAGCTGACATATGGGCCAACAGATGGAGTCTTGCCCAATACCAGTATGGTAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGCCACTCTCTGCTCTGCCAACAACCGAAAAGACAGAAACACTGGGGAGTTATGTCAGCTTACAGTTTaGAAAACTCTGAGGAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: NATLCSANNRKDRNTGELCQLTV*KTLRKW Trigger: CCATTTCCTCAGAGTTTTCAAAACTGTAAGCTGACA...TAACTCCCCAGTGTTTCTGTCTTTTCGGTTGTTGGCAGAGCAGAGAGTGGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR GCA 72 bp | TGTGTCTATTACTTCTATGTCAGCTCTGGAGAGAAATaGTTTACAAGACCAAGAGGTCACAAAAGCCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: CVYYFYVSSGEK*FTRPRGHKSPI Trigger: GATGGGGCTTTTGTGACCTCTTGGTCTTGTAAAGCATTTCTCTCCAGAGCTGACATAGAAGTAATAGACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR GCA 72 bp | AGGCCTCAAATTCATAGAGATTCATCCACCTGCCTCTaGTTCCTAAGTGCTAGAATTAAAGGTATGTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RPQIHRDSSTCL*FLSARIKGMCH Trigger: ATGGCACATACCTTTAATTCTAGCACTTAGGAAGCAGAGGCAGGTGGATGAATCTCTATGAATTTGAGGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| 3UTR TCA 72 bp | TTAATTCCAGGAAAAGAGAGAGAAGGATGTGAAACTTaGTCCCTATTCACCATAAAGAAACCAGCAAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LIPGKEREGCET*SLFTIKKPARP Trigger: TGGCCTTGCTGGTTTCTTTATGGTGAATAGGGATCAAGTTTCACATCCTTCTCTCTCTTTTCCTGGAATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| 3UTR CCA 72 bp | TTATCCAAACTGTGTCTATTACTTCTATGTCAGCTCTaGAGAGAAATGCTTTACAAGACCAAGAGGTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: LSKLCLLLLCQL*REMLYKTKRSQ Trigger: TTGTGACCTCTTGGTCTTGTAAAGCATTTCTCTCCAGAGCTGACATAGAAGTAATAGACACAGTTTGGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR GCA 90 bp | CAATGTCATGGTAGTCTGCAGGGGGAAGGATCCCTTGGTACAAACTTCATGTCTAGCTGCGCGATCTGCTaGGCTCGCCGCACGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCHGSLQGEGSLGTNFMSSCAIC*ARRTRR Trigger: CCTGCGCGTGCGGCGAGCGCAGCAGATCGCGCAGCT...AGACATGAAGTTTGTACCAAGGGATCCTTCCCCCTGCAGACTACCATGACATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110375.9 |
||
| CDS-3UTR CCA 90 bp | CACAACCACCATCTACCACCTTTATCCTTCCAGGACAGCGCAGTCAATCTGCAGCGAAGCGGCACTGATTaGCCAGCGCGGACAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HNHHLPPLSFQDSAVNLQRSGTD*PARTAG Trigger: GCCTGCTGTCCGCGCTGGCCAATCAGTGCCGCTTCG...CTGCAGATTGACTGCGCTGTCCTGGAAGGATAAAGGTGGTAGATGGTGGTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110375.9 |
||
| CDS-3UTR TCA 90 bp | GTCAGCAAGGAAGCTTCTCGTAGGAGGCGGATAGGAGTCATCTCCTTCTGGCCTGGCGGCGCCACAGCTTaGAGTGTTTCTTGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VSKEASRRRRIGVISFWPGGATA*SVSCPS Trigger: TGATGGACAAGAAACACTTCAAGCTGTGGCGCCGCC...AGGCCAGAAGGAGATGACTCCTATCCGCCTCCTACGAGAAGCTTCCTTGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | CACAACCACCATCTACCACCTTTATCCTTCCAGGACAGCGCAGTCAATCTGCAGCAGGGGATGGAGCAGTaGCCTTGGCCTCACTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HNHHLPPLSFQDSAVNLQQGMEQ*PWPHCS Trigger: TGAGCAGTGAGGCCAAGGCCACTGCTCCATCCCCTG...CTGCAGATTGACTGCGCTGTCCTGGAAGGATAAAGGTGGTAGATGGTGGTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCCAGGGTTACTGATGGAGGAGATACACATGGAGAGGACGGGGAGAAGGAATTCATTCCCTCCTGCTaGGGACTTTGGTTCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LARVTDGGDTHGEDGEKEFIPSC*GLWFGR Trigger: CCTCCCGAACCAAAGTCCCCAGCAGGAGGGAATGAA...TTCCTTCTCCCCGTCCTCTCCATGTGTATCTCCTCCATCAGTAACCCTGGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| CDS-3UTR CCA 90 bp | CAATGTCATGGTAGTCTGCAGGGGGAAGGATCCCTTGGTACAAACTTCATGTCTCTTCCGCTCAGGGGATaGAGCAGTGGCCTTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QCHGSLQGEGSLGTNFMSLPLRG*SSGLGL Trigger: GAGGCCAAGGCCACTGCTCCATCCCCTGAGCGGAAG...AGACATGAAGTTTGTACCAAGGGATCCTTCCCCCTGCAGACTACCATGACATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | CACAACCACCATCTACCACCTTTATCCTTCCAGGACAGCGCAGTCAATCTGCAGGACCCTGACAAACTCTaGAGACTCTGGCACACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HNHHLPPLSFQDSAVNLQDPDKL*RLWHTG Trigger: CCCAGTGTGCCAGAGTCTCCAGAGTTTGTCAGGGTC...CTGCAGATTGACTGCGCTGTCCTGGAAGGATAAAGGTGGTAGATGGTGGTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR TCA 90 bp | GTCAGCAAGGAAGCTTCTCGTAGGAGGCGGATAGGAGTCATCTCCTTCTGGCCTCAATCACCTCTAGCTTaGTCACAAGGGCATCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VSKEASRRRRIGVISFWPQSPLA*SQGHPI Trigger: AATGGGATGCCCTTGTGATCAAGCTAGAGGTGATTG...AGGCCAGAAGGAGATGACTCCTATCCGCCTCCTACGAGAAGCTTCCTTGCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGAGAACATGACAACTCCACAATGTCATGCTCCTCTGTTTGGTAAAGAGGAGACTCTGGCACACTaGGGTGTTCCACCGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: WPENMTTPQCHAPLFGKEETLAH*GVPPHV Trigger: CACGTGCGGTGGAACACCCCAGTGTGCCAGAGTCTC...CTCTTTACCAAACAGAGGAGCATGACATTGTGGAGTTGTCATGTTCTCAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | CACAACCACCATCTACCACCTTTATCCTTCCAGGACAGCGCAGTCAATCTGCAGATGGAGCAGTGGCCTTaGCCTCACTGCTCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HNHHLPPLSFQDSAVNLQMEQWP*PHCSFP Trigger: TGGAAATGAGCAGTGAGGCCAAGGCCACTGCTCCAT...CTGCAGATTGACTGCGCTGTCCTGGAAGGATAAAGGTGGTAGATGGTGGTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | CACAACCACCATCTACCACCTTTATCCTTCCAGGACAGCGCAGTCAATCTGCAGACAAAGCACTGTGTGTaGGCACCATGGACACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HNHHLPPLSFQDSAVNLQTKHCV*APWTPV Trigger: GACAGGTGTCCATGGTGCCCACACACAGTGCTTTGT...CTGCAGATTGACTGCGCTGTCCTGGAAGGATAAAGGTGGTAGATGGTGGTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125049.2 |
||
| CDS-3UTR TCA 90 bp | AATGCCACTCTCTGCTCTGCCAACAACCGAAAAGACAGAAACACTGGGGAGTTAGGCGGCGCCACAGCTTaGAGTGTTTCTTGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NATLCSANNRKDRNTGELGGATA*SVSCPS Trigger: TGATGGACAAGAAACACTTCAAGCTGTGGCGCCGCC...TAACTCCCCAGTGTTTCTGTCTTTTCGGTTGTTGGCAGAGCAGAGAGTGGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | CAATGTCATGGTAGTCTGCAGGGGGAAGGATCCCTTGGTACAAACTTCATGTCTTGTGTGTGGGCACCATaGACACCTGTCAAAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QCHGSLQGEGSLGTNFMSCVWAP*TPVKGS Trigger: GCTGCCTTTGACAGGTGTCCATGGTGCCCACACACA...AGACATGAAGTTTGTACCAAGGGATCCTTCCCCCTGCAGACTACCATGACATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125049.2 |
||
| 3UTR CAA 72 bp | AGCAAGGTGAGGACAAGGCACTTAGCTCAGCCAGAATaGTTCACACCACCACAGGACTGTTACCAAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKVRTRHLAQPE*FTPPQDCYQEH Trigger: GTGCTCTTGGTAACAGTCCTGTGGTGGTGTGAACAATTCTGGCTGAGCTAAGTGCCTTGTCCTCACCTTGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR TCA 90 bp | GTCAGCAAGGAAGCTTCTCGTAGGAGGCGGATAGGAGTCATCTCCTTCTGGCCTAAATGGGTTACCCAATaGAGAACCTCAGAACCACTA | + |
|
Preference number: 4 (lower is better) Translates to: VSKEASRRRRIGVISFWPKWVTQ*RTSEPL Trigger: TAGTGGTTCTGAGGTTCTTCATTGGGTAACCCATTT...AGGCCAGAAGGAGATGACTCCTATCCGCCTCCTACGAGAAGCTTCCTTGCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGTGCAACTCCTCCTCCTaGATTCTCTCCTCGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQCNSSS*ILSSSH Trigger: ATGGGACGAGGAGAGAATCCAGGAGGAGGAGTTGCA...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | AGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGCTGCAACTCCTCCTCCTaGATTCTCTCCTCGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQITKQRVNVTAQSLSPSCNSSS*ILSSSH Trigger: ATGGGACGAGGAGAGAATCCAGGAGGAGGAGTTGCA...GCTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | AATGCCACTCTCTGCTCTGCCAACAACCGAAAAGACAGAAACACTGGGGAGTTAAAACTCTGGAGACTCTaGCACACTGGGGTGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NATLCSANNRKDRNTGELKLWRL*HTGVFH Trigger: GTGGAACACCCCAGTGTGCCAGAGTCTCCAGAGTTT...TAACTCCCCAGTGTTTCTGTCTTTTCGGTTGTTGGCAGAGCAGAGAGTGGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGAGAACATGACAACTCCACAATGTCATGCTCCTCTGTTTGGTAAAGAGGACCCTGACAAACTCTaGAGACTCTGGCACACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WPENMTTPQCHAPLFGKEDPDKL*RLWHTG Trigger: CCCAGTGTGCCAGAGTCTCCAGAGTTTGTCAGGGTC...CTCTTTACCAAACAGAGGAGCATGACATTGTGGAGTTGTCATGTTCTCAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR TCA 90 bp | CACAACCACCATCTACCACCTTTATCCTTCCAGGACAGCGCAGTCAATCTGCAGATCACATTGTTTTCCTaGTCCACACTATACCGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HNHHLPPLSFQDSAVNLQITLFS*STLYRR Trigger: TCGGCGGTATAGTGTGGATCAGGAAAACAATGTGAT...CTGCAGATTGACTGCGCTGTCCTGGAAGGATAAAGGTGGTAGATGGTGGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCCAGGGTTACTGATGGAGGAGATACACATGGAGAGGACGGGGAGAAGGAAGAAAATGAACTCACCTaGACATTGAAGAACTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LARVTDGGDTHGEDGEKEENELT*TLKNCR Trigger: CCGACAGTTCTTCAATGTTCAGGTGAGTTCATTTTC...TTCCTTCTCCCCGTCCTCTCCATGTGTATCTCCTCCATCAGTAACCCTGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTATTTGTTATACAACCCAGGCTTGCCTCTAACTCACAGCAAGTCTCCTGCTGCAACTCCTCCTCCTaGATTCTCTCCTCGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVFVIQPRLASNSQQVSCCNSSS*ILSSSH Trigger: ATGGGACGAGGAGAGAATCCAGGAGGAGGAGTTGCA...GCAGGAGACTTGCTGTGAGTTAGAGGCAAGCCTGGGTTGTATAACAAATACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGTCTTGGCTTTCAGAGTaGCCATGTGCAGCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQSWLSE*PCAASP Trigger: TGGAGAAGCTGCACATGGCCACTCTGAAAGCCAAGA...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTGCACACTTCCACTGATCCTATCAAAACACTGATGACATCATTTAGGAAGCTTCCGCTCAGGGGATaGAGCAGTGGCCTTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FVHTSTDPIKTLMTSFRKLPLRG*SSGLGL Trigger: GAGGCCAAGGCCACTGCTCCATCCCCTGAGCGGAAG...CTTCCTAAATGATGTCATCAGTGTTTTGATAGGATCAGTGGAAGTGTGCACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR TCA 90 bp | ACTAGTCTTGTATTTGTTATACAACCCAGGCTTGCCTCTAACTCACAGCAAGTCGGCGGCGCCACAGCTTaGAGTGTTTCTTGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TSLVFVIQPRLASNSQQVGGATA*SVSCPS Trigger: TGATGGACAAGAAACACTTCAAGCTGTGGCGCCGCC...GACTTGCTGTGAGTTAGAGGCAAGCCTGGGTTGTATAACAAATACAAGACTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| CDS-3UTR TCA 90 bp | AGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGCCAATCACCTCTAGCTTaGTCACAAGGGCATCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SQITKQRVNVTAQSLSPSQSPLA*SQGHPI Trigger: AATGGGATGCCCTTGTGATCAAGCTAGAGGTGATTG...GCTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGGGAGAACAATAGAACACACGTGATAGGGAAGTTGGCCAGGGTTACTGATAACTCACCTGAACATTaGAGAACTGTCGGGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGENNRTHVIGKLARVTDNSPEH*RTVGES Trigger: TGACTCCCCGACAGTTCTTCAATGTTCAGGTGAGTT...ATCAGTAACCCTGGCCAACTTCCCTATCACGTGTGTTCTATTGTTCTCCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCCAGGGTTACTGATGGAGGAGATACACATGGAGAGGACGGGGAGAAGGAAAACCTGGAGAGAAAATaGACTCACCTGAACATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LARVTDGGDTHGEDGEKENLERK*THLNIE Trigger: TTCAATGTTCAGGTGAGTTCATTTTCTCTCCAGGTT...TTCCTTCTCCCCGTCCTCTCCATGTGTATCTCCTCCATCAGTAACCCTGGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTATGTGGCACTTTGGGAGATCTCACCTTCTCCTCTCACTTTTGTTTCACTCTTTTCATTCCCTCCTaGTGGGGACTTTGGTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLCGTLGDLTFSSHFCFTLFIPS*WGLWFG Trigger: CCCGAACCAAAGTCCCCAGCAGGAGGGAATGAAAAG...AGTGAAACAAAAGTGAGAGGAGAAGGTGAGATCTCCCAAAGTGCCACATAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTTGTGCACACTTCCACTGATCCTATCAAAACACTGATGACATCATTTAGGGAGACTCTGGCACACTaGGGTGTTCCACCGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: CFVHTSTDPIKTLMTSFRETLAH*GVPPHV Trigger: CACGTGCGGTGGAACACCCCAGTGTGCCAGAGTCTC...CCTAAATGATGTCATCAGTGTTTTGATAGGATCAGTGGAAGTGTGCACAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGTACTCTGTATCCAGCTaGACATTGAAGAACTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQYSVSS*TLKNCR Trigger: CCGACAGTTCTTCAATGTTCAGCTGGATACAGAGTA...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGATCACATTGTTTTCCTaGTCCACACTATACCGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQITLFS*STLYRR Trigger: TCGGCGGTATAGTGTGGATCAGGAAAACAATGTGAT...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGTCATCAAACGACTTGTaGGGACGGATAACCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQSSNDL*GRITIW Trigger: CCAAATGGTTATCCGTCCTCACAAGTCGTTTGATGA...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR TCA 90 bp | AGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGCTCATCAAACGACTTGTaGGGACGGATAACCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQITKQRVNVTAQSLSPSSSNDL*GRITIW Trigger: CCAAATGGTTATCCGTCCTCACAAGTCGTTTGATGA...GCTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGGGAGAACAATAGAACACACGTGATAGGGAAGTTGGCCAGGGTTACTGATTCATTAATGGACCTCTaGAACTCCTCCTCCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RGENNRTHVIGKLARVTDSLMDL*NSSSWI Trigger: AATCCAGGAGGAGGAGTTGCAGAGGTCCATTAATGA...ATCAGTAACCCTGGCCAACTTCCCTATCACGTGTGTTCTATTGTTCTCCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGTCATTAATGGACCTCTaGAACTCCTCCTCCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQSLMDL*NSSSWI Trigger: AATCCAGGAGGAGGAGTTGCAGAGGTCCATTAATGA...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTACAGAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAAACTCTGGAGACTCTaGCACACTGGGGTGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVQSQITKQRVNVTAQSLKLWRL*HTGVFH Trigger: GTGGAACACCCCAGTGTGCCAGAGTCTCCAGAGTTT...CAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTCTGTACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | CAATGTCATGGTAGTCTGCAGGGGGAAGGATCCCTTGGTACAAACTTCATGTCTAGGGAACACTGTCTGTaGATTGTCACTGTATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QCHGSLQGEGSLGTNFMSREHCL*IVTVCQ Trigger: CTGACATACAGTGACAATCCACAGACAGTGTTCCCT...AGACATGAAGTTTGTACCAAGGGATCCTTCCCCCTGCAGACTACCATGACATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR TCA 90 bp | AATGCCACTCTCTGCTCTGCCAACAACCGAAAAGACAGAAACACTGGGGAGTTAAAATGGGTTACCCAATaGAGAACCTCAGAACCACTA | + |
|
Preference number: 4 (lower is better) Translates to: NATLCSANNRKDRNTGELKWVTQ*RTSEPL Trigger: TAGTGGTTCTGAGGTTCTTCATTGGGTAACCCATTT...TAACTCCCCAGTGTTTCTGTCTTTTCGGTTGTTGGCAGAGCAGAGAGTGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCTGAGAACATGACAACTCCACAATGTCATGCTCCTCTGTTTGGTAAAGAGTCATTAATGGACCTCTaGAACTCCTCCTCCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: WPENMTTPQCHAPLFGKESLMDL*NSSSWI Trigger: AATCCAGGAGGAGGAGTTGCAGAGGTCCATTAATGA...CTCTTTACCAAACAGAGGAGCATGACATTGTGGAGTTGTCATGTTCTCAGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | CAATGTCATGGTAGTCTGCAGGGGGAAGGATCCCTTGGTACAAACTTCATGTCTGAAAAGCTTGCCGTCTaGGAGAGGAAAACAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: QCHGSLQGEGSLGTNFMSEKLAV*ERKTNK Trigger: TTTGTTTGTTTTCCTCTCCCAGACGGCAAGCTTTTC...AGACATGAAGTTTGTACCAAGGGATCCTTCCCCCTGCAGACTACCATGACATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125049.2 |
||
| 3UTR CAA 72 bp | TCCCTACCATACTGGTATTGGGCAAGACTCCATCTGTaGGCCCATATGTCAGCTTACAGTTTTGAAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPYWYWARLHL*AHMSAYSFENS Trigger: AGAGTTTTCAAAACTGTAAGCTGACATATGGGCCAACAGATGGAGTCTTGCCCAATACCAGTATGGTAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | AATGCCACTCTCTGCTCTGCCAACAACCGAAAAGACAGAAACACTGGGGAGTTAATCACGAGAGTACATTaGATAAGGAAAATGGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NATLCSANNRKDRNTGELITRVH*IRKMGY Trigger: GTAACCCATTTTCCTTATCCAATGTACTCTCGTGAT...TAACTCCCCAGTGTTTCTGTCTTTTCGGTTGTTGGCAGAGCAGAGAGTGGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTGCACACTTCCACTGATCCTATCAAAACACTGATGACATCATTTAGGAAGTCTTGGCTTTCAGAGTaGCCATGTGCAGCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FVHTSTDPIKTLMTSFRKSWLSE*PCAASP Trigger: TGGAGAAGCTGCACATGGCCACTCTGAAAGCCAAGA...CTTCCTAAATGATGTCATCAGTGTTTTGATAGGATCAGTGGAAGTGTGCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTTAACTGTACAGAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAATGGAGCAGTGGCCTTaGCCTCACTGCTCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVNCTESNHKTKGKRNCSMEQWP*PHCSFP Trigger: TGGAAATGAGCAGTGAGGCCAAGGCCACTGCTCCAT...TGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTCTGTACAGTTAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGAGAACATGACAACTCCACAATGTCATGCTCCTCTGTTTGGTAAAGAGATCACGAGAGTACATTaGATAAGGAAAATGGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: WPENMTTPQCHAPLFGKEITRVH*IRKMGY Trigger: GTAACCCATTTTCCTTATCCAATGTACTCTCGTGAT...CTCTTTACCAAACAGAGGAGCATGACATTGTGGAGTTGTCATGTTCTCAGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTGCACACTTCCACTGATCCTATCAAAACACTGATGACATCATTTAGGAAGTACTCTGTATCCAGCTaGACATTGAAGAACTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FVHTSTDPIKTLMTSFRKYSVSS*TLKNCR Trigger: CCGACAGTTCTTCAATGTTCAGCTGGATACAGAGTA...CTTCCTAAATGATGTCATCAGTGTTTTGATAGGATCAGTGGAAGTGTGCACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| CDS-3UTR CCA 90 bp | TTTGTGCACACTTCCACTGATCCTATCAAAACACTGATGACATCATTTAGGAAGAGGGAACACTGTCTGTaGATTGTCACTGTATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FVHTSTDPIKTLMTSFRKREHCL*IVTVCQ Trigger: CTGACATACAGTGACAATCCACAGACAGTGTTCCCT...CTTCCTAAATGATGTCATCAGTGTTTTGATAGGATCAGTGGAAGTGTGCACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| CDS TCA 90 bp | ATCTGCTGCGCTCGCCGCACGCGCAGGCCCGTCACGAAGCGGCACTaGTTGGCCAGCGCGGACAGCAGGCCCCCGCCCCGCGCGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ICCARRTRRPVTKRH*LASADSRPPPRAPA Trigger: GGCGGGCGCGCGGGGCGGGGGCCTGCTGTCCGCGCTGGCCAATCAGTGCCGCTTCGTGACGGGCCTGCGCGTGCGGCGAGCGCAGCAGAT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110375.9 |
||
| CDS CCA 90 bp | AATCCGAGCAGGGCCACAGCTACCCTCATTCTTCCGCTCAGGGGATaGAGCAGTGGCCTTGGCCTCACTGCTCATTTCCAGAGGCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: NPSRATATLILPLRG*SSGLGLTAHFQRLS Trigger: GCTAAGCCTCTGGAAATGAGCAGTGAGGCCAAGGCCACTGCTCCATCCCCTGAGCGGAAGAATGAGGGTAGCTGTGGCCCTGCTCGGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| CDS-3UTR CAA 90 bp | GTCAGCAAGGAAGCTTCTCGTAGGAGGCGGATAGGAGTCATCTCCTTCTGGCCTGGGCGGCGCCACAGCTaGAAGTGTTTCTTGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: VSKEASRRRRIGVISFWPGRRHS*KCFLSI Trigger: GATGGACAAGAAACACTTCAAGCTGTGGCGCCGCCC...AGGCCAGAAGGAGATGACTCCTATCCGCCTCCTACGAGAAGCTTCCTTGCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CAA 90 bp | GTCAGCAAGGAAGCTTCTCGTAGGAGGCGGATAGGAGTCATCTCCTTCTGGCCTGATGGAGCAGTGGCCTaGGCCTCACTGCTCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSKEASRRRRIGVISFWPDGAVA*ASLLIS Trigger: GGAAATGAGCAGTGAGGCCAAGGCCACTGCTCCATC...AGGCCAGAAGGAGATGACTCCTATCCGCCTCCTACGAGAAGCTTCCTTGCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGGGGCGGCGCCACAGCTaGAAGTGTTTCTTGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQGRRHS*KCFLSI Trigger: GATGGACAAGAAACACTTCAAGCTGTGGCGCCGCCC...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CAA 90 bp | AATGCCACTCTCTGCTCTGCCAACAACCGAAAAGACAGAAACACTGGGGAGTTAGATGGAGCAGTGGCCTaGGCCTCACTGCTCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NATLCSANNRKDRNTGELDGAVA*ASLLIS Trigger: GGAAATGAGCAGTGAGGCCAAGGCCACTGCTCCATC...TAACTCCCCAGTGTTTCTGTCTTTTCGGTTGTTGGCAGAGCAGAGAGTGGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CAA 90 bp | GTCAGCAAGGAAGCTTCTCGTAGGAGGCGGATAGGAGTCATCTCCTTCTGGCCTAGGACGGATAACCATTaGGGATTCGTAAGATCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VSKEASRRRRIGVISFWPRTDNH*GFVRSD Trigger: GTCAGATCTTACGAATCCCAAATGGTTATCCGTCCT...AGGCCAGAAGGAGATGACTCCTATCCGCCTCCTACGAGAAGCTTCCTTGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS TCA 90 bp | GAAGCAGCAGAGCAAGGCAGGGACGACATGTACCAAGGAAGAGTGTaGAAAGCTTGCCGTCTGGGAGAGGAAAACAAACAAAATTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EAAEQGRDDMYQGRV*KACRLGEENKQNLA Trigger: GGCCAAATTTTGTTTGTTTTCCTCTCCCAGACGGCAAGCTTTTCACACTCTTCCTTGGTACATGTCGTCCCTGCCTTGCTCTGCTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125049.2 |
||
| CDS-3UTR CAA 90 bp | ACTAGTCTTGTATTTGTTATACAACCCAGGCTTGCCTCTAACTCACAGCAAGTCGGGCGGCGCCACAGCTaGAAGTGTTTCTTGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TSLVFVIQPRLASNSQQVGRRHS*KCFLSI Trigger: GATGGACAAGAAACACTTCAAGCTGTGGCGCCGCCC...GACTTGCTGTGAGTTAGAGGCAAGCCTGGGTTGTATAACAAATACAAGACTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| CDS-3UTR CAA 90 bp | AATGCCACTCTCTGCTCTGCCAACAACCGAAAAGACAGAAACACTGGGGAGTTATCAATCACCTCTAGCTaGATCACAAGGGCATCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NATLCSANNRKDRNTGELSITSS*ITRASH Trigger: ATGGGATGCCCTTGTGATCAAGCTAGAGGTGATTGA...TAACTCCCCAGTGTTTCTGTCTTTTCGGTTGTTGGCAGAGCAGAGAGTGGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGAGGACGGATAACCATTaGGGATTCGTAAGATCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQRTDNH*GFVRSD Trigger: GTCAGATCTTACGAATCCCAAATGGTTATCCGTCCT...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CAA 90 bp | AATGCCACTCTCTGCTCTGCCAACAACCGAAAAGACAGAAACACTGGGGAGTTATCCCAGGGTTCTTCCTaGTCTTTTGACTTTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: NATLCSANNRKDRNTGELSQGSS*SFDFSF Trigger: GAATGAAAAGTCAAAAGACAAGGAAGAACCCTGGGA...TAACTCCCCAGTGTTTCTGTCTTTTCGGTTGTTGGCAGAGCAGAGAGTGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTACAGAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGTCAATCACCTCTAGCTaGATCACAAGGGCATCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TVQSQITKQRVNVTAQSLSITSS*ITRASH Trigger: ATGGGATGCCCTTGTGATCAAGCTAGAGGTGATTGA...CAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTCTGTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTATGTGGCACTTTGGGAGATCTCACCTTCTCCTCTCACTTTTGTTTCACTGTTCTTCCTTGTCTTTaGACTTTTCATTCCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLCGTLGDLTFSSHFCFTVLPCL*TFHSLL Trigger: CAGGAGGGAATGAAAAGTCAAAAGACAAGGAAGAAC...AGTGAAACAAAAGTGAGAGGAGAAGGTGAGATCTCCCAAAGTGCCACATAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTATGTGGCACTTTGGGAGATCTCACCTTCTCCTCTCACTTTTGTTTCACTTCCCAGGGTTCTTCCTaGTCTTTTGACTTTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VLCGTLGDLTFSSHFCFTSQGSS*SFDFSF Trigger: GAATGAAAAGTCAAAAGACAAGGAAGAACCCTGGGA...AGTGAAACAAAAGTGAGAGGAGAAGGTGAGATCTCCCAAAGTGCCACATAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
||
| CDS-3UTR CAA 90 bp | CAATGTCATGGTAGTCTGCAGGGGGAAGGATCCCTTGGTACAAACTTCATGTCTAATCACGAGAGTACATaGGATAAGGAAAATGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QCHGSLQGEGSLGTNFMSNHEST*DKENGL Trigger: TAACCCATTTTCCTTATCCAATGTACTCTCGTGATT...AGACATGAAGTTTGTACCAAGGGATCCTTCCCCCTGCAGACTACCATGACATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAGCCCCAGAATCACGAGAGTACATaGGATAAGGAAAATGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ESNHKTKGKRNCSVPEPQNHEST*DKENGL Trigger: TAACCCATTTTCCTTATCCAATGTACTCTCGTGATT...CTGGGGCTCAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTACAGAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTCCCTGAACACTGTCTGTGGATaGTCACTGTATGTCAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVQSQITKQRVNVTAQSLNTVCG*SLYVSK Trigger: CTTACTGACATACAGTGACAATCCACAGACAGTGTT...CAGGGACTGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTCTGTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTGCACACTTCCACTGATCCTATCAAAACACTGATGACATCATTTAGGAAGTTGATCTCCATGTTCTaGGCTTTCAGAGTGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: FVHTSTDPIKTLMTSFRKLISMF*AFRVAM Trigger: CATGGCCACTCTGAAAGCCAAGAACATGGAGATCAA...CTTCCTAAATGATGTCATCAGTGTTTTGATAGGATCAGTGGAAGTGTGCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTTAACTGTACAGAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCATTGATCTCCATGTTCTaGGCTTTCAGAGTGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: QVNCTESNHKTKGKRNCSLISMF*AFRVAM Trigger: CATGGCCACTCTGAAAGCCAAGAACATGGAGATCAA...TGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTCTGTACAGTTAACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| CDS-3UTR CAA 90 bp | CAAGTTAACTGTACAGAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAAAGAGTGTGAAAAGCTaGCCGTCTGGGAGAGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: QVNCTESNHKTKGKRNCSKSVKS*PSGRGK Trigger: TTTTCCTCTCCCAGACGGCAAGCTTTTCACACTCTT...TGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTCTGTACAGTTAACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125049.2 |
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| CDS-3UTR CAA 90 bp | TTTGTGCACACTTCCACTGATCCTATCAAAACACTGATGACATCATTTAGGAAGGTTCTTCCTTGTCTTTaGACTTTTCATTCCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: FVHTSTDPIKTLMTSFRKVLPCL*TFHSLL Trigger: CAGGAGGGAATGAAAAGTCAAAAGACAAGGAAGAAC...CTTCCTAAATGATGTCATCAGTGTTTTGATAGGATCAGTGGAAGTGTGCACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| CDS-3UTR CAA 90 bp | TGTTTTGTGCACACTTCCACTGATCCTATCAAAACACTGATGACATCATTTAGGAACACTGTCTGTGGATaGTCACTGTATGTCAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: CFVHTSTDPIKTLMTSFRNTVCG*SLYVSK Trigger: CTTACTGACATACAGTGACAATCCACAGACAGTGTT...CCTAAATGATGTCATCAGTGTTTTGATAGGATCAGTGGAAGTGTGCACAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| CDS-3UTR CAA 90 bp | CAAGTTAACTGTACAGAGTCAAATCACAAAACAAAGGGTAAACGTAACTGCTCAGTTCTTCCTTGTCTTTaGACTTTTCATTCCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: QVNCTESNHKTKGKRNCSVLPCL*TFHSLL Trigger: CAGGAGGGAATGAAAAGTCAAAAGACAAGGAAGAAC...TGAGCAGTTACGTTTACCCTTTGTTTTGTGATTTGACTCTGTACAGTTAACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| CDS CCA 72 bp | GCCGCACGCGCAGGCCCGTCACGAAGCGGCACTGATTaGCCAGCGCGGACAGCAGGCCCCCGCCCCGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: AARAGPSRSGTD*PARTAGPRPAR Trigger: GCGCGCGGGGCGGGGGCCTGCTGTCCGCGCTGGCCAATCAGTGCCGCTTCGTGACGGGCCTGCGCGTGCGGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110375.9 |
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| CDS TCA 72 bp | GCTCGCCGCACGCGCAGGCCCGTCACGAAGCGGCACTaGTTGGCCAGCGCGGACAGCAGGCCCCCGCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: ARRTRRPVTKRH*LASADSRPPPR Trigger: GCGGGGCGGGGGCCTGCTGTCCGCGCTGGCCAATCAGTGCCGCTTCGTGACGGGCCTGCGCGTGCGGCGAGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110375.9 |
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| CDS CCA 72 bp | AGGGCCACAGCTACCCTCATTCTTCCGCTCAGGGGATaGAGCAGTGGCCTTGGCCTCACTGCTCATTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RATATLILPLRG*SSGLGLTAHFQ Trigger: CTGGAAATGAGCAGTGAGGCCAAGGCCACTGCTCCATCCCCTGAGCGGAAGAATGAGGGTAGCTGTGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| CDS CCA 72 bp | CATTTGGGATTCGTAAGATCTGACCCTGACAAACTCTaGAGACTCTGGCACACTGGGGTGTTCCACCGCACG | + |
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Preference number: 6 (lower is better) Translates to: HLGFVRSDPDKL*RLWHTGVFHRT Trigger: CGTGCGGTGGAACACCCCAGTGTGCCAGAGTCTCCAGAGTTTGTCAGGGTCAGATCTTACGAATCCCAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| CDS CAA 90 bp | AGGTGGGTGCCTGTAATTGGGCGGCGCCACAGCTTGAAGTGTTTCTaGTCCATCACCATTTCCCAGGGTTCTTCCTTGTCTTTTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: RWVPVIGRRHSLKCF*SITISQGSSLSFDF Trigger: AAAGTCAAAAGACAAGGAAGAACCCTGGGAAATGGTGATGGACAAGAAACACTTCAAGCTGTGGCGCCGCCCAATTACAGGCACCCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110374.2 ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| CDS CAA 90 bp | GTCAAAGCCATTCTCATCAAACGACTTGTGAGGACGGATAACCATTaGGGATTCGTAAGATCTGACCCTGACAAACTCTGGAGACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: VKAILIKRLVRTDNH*GFVRSDPDKLWRLW Trigger: CCAGAGTCTCCAGAGTTTGTCAGGGTCAGATCTTACGAATCCCAAATGGTTATCCGTCCTCACAAGTCGTTTGATGAGAATGGCTTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| CDS GCA 72 bp | TTGATCTCCATGTTCTTGGCTTTCAGAGTGGCCATGTaGAGCTTCTCCAAGAAATCTGGCATGCCACTAGAA | + |
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Preference number: 6 (lower is better) Translates to: LISMFLAFRVAM*SFSKKSGMPLE Trigger: TTCTAGTGGCATGCCAGATTTCTTGGAGAAGCTGCACATGGCCACTCTGAAAGCCAAGAACATGGAGATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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| CDS TCA 72 bp | TCCAAACCTGGAGAGAAAATGAACTCACCTGAACATTaGAGAACTGTCGGGGAGTCACATCTGTGTATGTTC | + |
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Preference number: 6 (lower is better) Translates to: SKPGEKMNSPEH*RTVGESHLCMF Trigger: GAACATACACAGATGTGACTCCCCGACAGTTCTTCAATGTTCAGGTGAGTTCATTTTCTCTCCAGGTTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110374.2 |
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| CDS CAA 72 bp | ATTCTCATCAAACGACTTGTGAGGACGGATAACCATTaGGGATTCGTAAGATCTGACCCTGACAAACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ILIKRLVRTDNH*GFVRSDPDKLW Trigger: CCAGAGTTTGTCAGGGTCAGATCTTACGAATCCCAAATGGTTATCCGTCCTCACAAGTCGTTTGATGAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110375.9 ENSMUST00000125049.2 |
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