Pregenerated sensors for STARD6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079608Ensembl transcript IDs: ENSMUST00000114959.9, ENSMUST00000164223.8, ENSMUST00000168249.9, ENSMUST00000174118.8, ENSMUST00000174667.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACGGTATCTCCTTCTTTAGGATCCGAATGCACAGCATGCTCAGATaGTCAAAGTGTATTAACGGCACATTATTTAATGTTATGTTAGCT | + |
|
Preference number: 1 (lower is better) Translates to: DGISFFRIRMHSMLR*SKCINGTLFNVMLA Trigger: AGCTAACATAACATTAAATAATGTGCCGTTAATACACTTTGACCATCTGAGCATGCTGTGCATTCGGATCCTAAAGAAGGAGATACCGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114959.9 |
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| 3UTR-3UTR GCA 90 bp | TGGTCCTGTTTTAGCTTCTTCACGGCAGGGATTTCAGGTGCTTACCATCACTGCTCTTTAGGATCCGAATaGACAGCATGCTCAGATGGT | + |
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Preference number: 2 (lower is better) Translates to: WSCFSFFTAGISGAYHHCSLGSE*TACSDG Trigger: ACCATCTGAGCATGCTGTGCATTCGGATCCTAAAGA...GCAGTGATGGTAAGCACCTGAAATCCCTGCCGTGAAGAAGCTAAAACAGGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114959.9 |
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| 3UTR CCA 72 bp | TCCTTCTTTAGGATCCGAATGCACAGCATGCTCAGATaGTCAAAGTGTATTAACGGCACATTATTTAATGTT | + |
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Preference number: 3 (lower is better) Translates to: SFFRIRMHSMLR*SKCINGTLFNV Trigger: AACATTAAATAATGTGCCGTTAATACACTTTGACCATCTGAGCATGCTGTGCATTCGGATCCTAAAGAAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114959.9 |
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| CDS-3UTR TCA 90 bp | TCCTGTTTTAGCTTCTTCACGGCAGGGATTTCAGGTGCTTACCATCACTGCCAGGTCTCTAGGGGAAATTaGGCCCATGGCAAAACTTTG | + |
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Preference number: 4 (lower is better) Translates to: SCFSFFTAGISGAYHHCQVSRGN*AHGKTL Trigger: CAAAGTTTTGCCATGGGCTCAATTTCCCCTAGAGAC...CTGGCAGTGATGGTAAGCACCTGAAATCCCTGCCGTGAAGAAGCTAAAACAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114959.9 |
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| CDS-3UTR TCA 90 bp | GACTTAGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCGTCTCTAGGGGAAATTaGGCCCATGGCAAAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DLGVLCRNKLHLLVGCAVVSRGN*AHGKTL Trigger: CAAAGTTTTGCCATGGGCTCAATTTCCCCTAGAGAC...GACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCTAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR TCA 90 bp | AGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCTGAAAGTTTTCCTTCAGAGGTaGACACACATAGCCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSTLQEQTPLTSRLCCLKVFLQR*THIARG Trigger: CCCTCTGGCTATGTGTGTTCACCTCTGAAGGAAAAC...TTTCAGACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR GCA 90 bp | GACTTAGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCCCTTCTTTCTTTTTGTaGACAGAGGAGTGCGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: DLGVLCRNKLHLLVGCAVPSFFL*TEECEL Trigger: CAGTTCGCACTCCTCTGTGCACAAAAAGAAAGAAGG...GACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCTAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CCA 90 bp | GGTCCTGTTTTAGCTTCTTCACGGCAGGGATTTCAGGTGCTTACCATCACTGCCCCTTTCATCTCTGTCTaGACAAAAATCACTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPVLASSRQGFQVLTITAPFISV*TKITSL Trigger: CAAGCTAGTGATTTTTGTCCAGACAGAGATGAAAGG...GGCAGTGATGGTAAGCACCTGAAATCCCTGCCGTGAAGAAGCTAAAACAGGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114959.9 |
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| CDS-3UTR TCA 90 bp | GACTTAGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCCTCTGTGATCATGTTTaGAGAGGAAGTCAGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLGVLCRNKLHLLVGCAVLCDHV*RGSQRD Trigger: ATCTCTCTGACTTCCTCTTCAAACATGATCACAGAG...GACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCTAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CCA 90 bp | GACTTAGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCCGGTATAGGTTTCCGTaGAATATTCTAGAGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DLGVLCRNKLHLLVGCAVRYRFP*NILEVL Trigger: CAAGACCTCTAGAATATTCCACGGAAACCTATACCG...GACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCTAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CCA 90 bp | TTGTGCTGGTCCTGTTTTAGCTTCTTCACGGCAGGGATTTCAGGTGCTTACCATCTTTGTGTAATGGTGTaGCATATGAGTGTGTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCWSCFSFFTAGISGAYHLCVMV*HMSVSE Trigger: TTCGGACACACTCATATGCCACACCATTACACAAAG...ATGGTAAGCACCTGAAATCCCTGCCGTGAAGAAGCTAAAACAGGACCAGCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114959.9 |
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| CDS-3UTR CCA 90 bp | GACTTAGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCCTTTGTGTAATGGTGTaGCATATGAGTGTGTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLGVLCRNKLHLLVGCAVLCVMV*HMSVSE Trigger: TTCGGACACACTCATATGCCACACCATTACACAAAG...GACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCTAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CCA 90 bp | TTGTGCTGGTCCTGTTTTAGCTTCTTCACGGCAGGGATTTCAGGTGCTTACCATAGTTGGAGCATATCCTaGGAAGTCCACACTTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCWSCFSFFTAGISGAYHSWSIS*EVHTFS Trigger: ACTAAAAGTGTGGACTTCCCAGGATATGCTCCAACT...ATGGTAAGCACCTGAAATCCCTGCCGTGAAGAAGCTAAAACAGGACCAGCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114959.9 |
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| CDS-3UTR TCA 90 bp | AGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCTGAAACTCTGTGATCATGTTTaGAGAGGAAGTCAGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSTLQEQTPLTSRLCCLKLCDHV*RGSQRD Trigger: ATCTCTCTGACTTCCTCTTCAAACATGATCACAGAG...TTTCAGACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CCA 90 bp | AGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCTGAAACGGTATAGGTTTCCGTaGAATATTCTAGAGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RSTLQEQTPLTSRLCCLKRYRFP*NILEVL Trigger: CAAGACCTCTAGAATATTCCACGGAAACCTATACCG...TTTCAGACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CCA 90 bp | TGTTTTAGCTTCTTCACGGCAGGGATTTCAGGTGCTTACCATCACTGCCAGATGCAAAAATCACTAGCTTaGAATAGGCTGGGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CFSFFTAGISGAYHHCQMQKSLA*NRLGFP Trigger: AGGAAAACCCAGCCTATTCCAAGCTAGTGATTTTTG...CATCTGGCAGTGATGGTAAGCACCTGAAATCCCTGCCGTGAAGAAGCTAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114959.9 |
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| CDS-3UTR CCA 90 bp | GACTTAGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCCAAAAATCACTAGCTTaGAATAGGCTGGGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLGVLCRNKLHLLVGCAVQKSLA*NRLGFP Trigger: AGGAAAACCCAGCCTATTCCAAGCTAGTGATTTTTG...GACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCTAAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CCA 90 bp | AGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCTGAAACCTTTCATCTCTGTCTaGACAAAAATCACTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RSTLQEQTPLTSRLCCLKPFISV*TKITSL Trigger: CAAGCTAGTGATTTTTGTCCAGACAGAGATGAAAGG...TTTCAGACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR GCA 90 bp | TGTTTTAGCTTCTTCACGGCAGGGATTTCAGGTGCTTACCATCACTGCCAGATGCTTTTCAATTACCGATaGAGGCAATTTTCCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFSFFTAGISGAYHHCQMLFNYR*RQFSFH Trigger: ATGAAAGGAAAATTGCCTGCATCGGTAATTGAAAAG...CATCTGGCAGTGATGGTAAGCACCTGAAATCCCTGCCGTGAAGAAGCTAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114959.9 |
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| CDS-3UTR GCA 90 bp | GACTTAGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCCTTTTCAATTACCGATaGAGGCAATTTTCCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLGVLCRNKLHLLVGCAVLFNYR*RQFSFH Trigger: ATGAAAGGAAAATTGCCTGCATCGGTAATTGAAAAG...GACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCTAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR GCA 90 bp | AGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCTGAAACTTTTCAATTACCGATaGAGGCAATTTTCCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSTLQEQTPLTSRLCCLKLFNYR*RQFSFH Trigger: ATGAAAGGAAAATTGCCTGCATCGGTAATTGAAAAG...TTTCAGACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CAA 90 bp | TGGTCCTGTTTTAGCTTCTTCACGGCAGGGATTTCAGGTGCTTACCATCACTGCACGCCATCTTTCACATaGAGGAGGAAGCTTACTAAG | + |
|
Preference number: 5 (lower is better) Translates to: WSCFSFFTAGISGAYHHCTPSFT*RRKLTK Trigger: CTTAGTAAGCTTCCTCCTCAATGTGAAAGATGGCGT...GCAGTGATGGTAAGCACCTGAAATCCCTGCCGTGAAGAAGCTAAAACAGGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114959.9 |
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| CDS-3UTR CAA 90 bp | TTGTGCTGGTCCTGTTTTAGCTTCTTCACGGCAGGGATTTCAGGTGCTTACCATGCCCATGGCAAAACTTaGTGTAATGGTGTGGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: LCWSCFSFFTAGISGAYHAHGKT*CNGVAY Trigger: ATATGCCACACCATTACACAAAGTTTTGCCATGGGC...ATGGTAAGCACCTGAAATCCCTGCCGTGAAGAAGCTAAAACAGGACCAGCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114959.9 |
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| CDS-3UTR CAA 90 bp | GACTTAGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCGCCCATGGCAAAACTTaGTGTAATGGTGTGGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: DLGVLCRNKLHLLVGCAVAHGKT*CNGVAY Trigger: ATATGCCACACCATTACACAAAGTTTTGCCATGGGC...GACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCTAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CAA 90 bp | GACTTAGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCGGATATAAGTCGAAGTaGGAGCATATCCTGGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: DLGVLCRNKLHLLVGCAVGYKSK*EHILGS Trigger: ACTTCCCAGGATATGCTCCAACTTCGACTTATATCC...GACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCTAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CAA 90 bp | CCCAGGCTAGTGTCATTGTGCTGGTCCTGTTTTAGCTTCTTCACGGCAGGGATTAATATTCTAGAGGTCTaGCTGGAAACAGTTACCTTT | + |
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Preference number: 5 (lower is better) Translates to: PRLVSLCWSCFSFFTAGINILEV*LETVTF Trigger: AAAGGTAACTGTTTCCAGCAAGACCTCTAGAATATT...AATCCCTGCCGTGAAGAAGCTAAAACAGGACCAGCACAATGACACTAGCCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114959.9 |
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| CDS-3UTR CAA 90 bp | AGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCTGAAAGCCCATGGCAAAACTTaGTGTAATGGTGTGGCATAT | + |
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Preference number: 5 (lower is better) Translates to: RSTLQEQTPLTSRLCCLKAHGKT*CNGVAY Trigger: ATATGCCACACCATTACACAAAGTTTTGCCATGGGC...TTTCAGACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CAA 90 bp | AGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCTGAAAGGATATAAGTCGAAGTaGGAGCATATCCTGGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: RSTLQEQTPLTSRLCCLKGYKSK*EHILGS Trigger: ACTTCCCAGGATATGCTCCAACTTCGACTTATATCC...TTTCAGACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CAA 90 bp | AGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCTGAAAACGCCATCTTTCACATaGAGGAGGAAGCTTACTAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSTLQEQTPLTSRLCCLKTPSFT*RRKLTK Trigger: CTTAGTAAGCTTCCTCCTCAATGTGAAAGATGGCGT...TTTCAGACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CAA 90 bp | AGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCTGAAATGTCCTTCTTTCTTTTaGTGCACAGAGGAGTGCGAA | + |
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Preference number: 5 (lower is better) Translates to: RSTLQEQTPLTSRLCCLKCPSFF*CTEECE Trigger: TTCGCACTCCTCTGTGCACAAAAAGAAAGAAGGACA...TTTCAGACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CAA 90 bp | GACTTAGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCAACTTGTTCAGCAGTTaGTTGGGCAATTGCCTTATA | + |
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Preference number: 5 (lower is better) Translates to: DLGVLCRNKLHLLVGCAVNLFSS*LGNCLI Trigger: TATAAGGCAATTGCCCAACAAACTGCTGAACAAGTT...GACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCTAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS CCA 90 bp | GGGATGATTAAAGCCACGGATATAAGTCGAAGTTGGAGCATATCCTaGGAAGTCCACACTTTTAGTACTGATAATGTCCACGTTCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: GMIKATDISRSWSIS*EVHTFSTDNVHVPF Trigger: GAAAGGAACGTGGACATTATCAGTACTAAAAGTGTGGACTTCCCAGGATATGCTCCAACTTCGACTTATATCCGTGGCTTTAATCATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000114959.9 ENSMUST00000164223.8 ENSMUST00000168249.9 ENSMUST00000174118.8 ENSMUST00000174667.2 |
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| CDS CCA 90 bp | CACATAGCCAGAGGGATGATTAAAGCCACGGATATAAGTCGAAGTTaGAGCATATCCTGGGAAGTCCACACTTTTAGTACTGATAATGTC | + |
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Preference number: 5 (lower is better) Translates to: HIARGMIKATDISRS*SISWEVHTFSTDNV Trigger: GACATTATCAGTACTAAAAGTGTGGACTTCCCAGGATATGCTCCAACTTCGACTTATATCCGTGGCTTTAATCATCCCTCTGGCTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000114959.9 ENSMUST00000164223.8 ENSMUST00000168249.9 ENSMUST00000174118.8 ENSMUST00000174667.2 |
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| CDS-3UTR CAA 90 bp | AGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCTGAAAAACTTGTTCAGCAGTTaGTTGGGCAATTGCCTTATA | + |
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Preference number: 5 (lower is better) Translates to: RSTLQEQTPLTSRLCCLKNLFSS*LGNCLI Trigger: TATAAGGCAATTGCCCAACAAACTGCTGAACAAGTT...TTTCAGACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CAA 90 bp | GACTTAGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCAATATTCTAGAGGTCTaGCTGGAAACAGTTACCTTT | + |
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Preference number: 5 (lower is better) Translates to: DLGVLCRNKLHLLVGCAVNILEV*LETVTF Trigger: AAAGGTAACTGTTTCCAGCAAGACCTCTAGAATATT...GACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCTAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS CCA 90 bp | TCTCTAGGGGAAATTGAGCCCATGGCAAAACTTTGTGTAATGGTGTaGCATATGAGTGTGTCCGAATCAATCTTGTGTATCACATTGAAC | + |
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Preference number: 5 (lower is better) Translates to: SLGEIEPMAKLCVMV*HMSVSESILCITLN Trigger: GTTCAATGTGATACACAAGATTGATTCGGACACACTCATATGCCACACCATTACACAAAGTTTTGCCATGGGCTCAATTTCCCCTAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114959.9 ENSMUST00000164223.8 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS-3UTR CAA 90 bp | AGGAGTACTCTGCAGGAACAAACTCCACTTACTAGTAGGCTGTGCTGTCTGAAAAATATTCTAGAGGTCTaGCTGGAAACAGTTACCTTT | + |
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Preference number: 5 (lower is better) Translates to: RSTLQEQTPLTSRLCCLKNILEV*LETVTF Trigger: AAAGGTAACTGTTTCCAGCAAGACCTCTAGAATATT...TTTCAGACAGCACAGCCTACTAGTAAGTGGAGTTTGTTCCTGCAGAGTACTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114959.9 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS GCA 72 bp | GCAGAATGTCCTTCTTTCTTTTTGTGCACAGAGGAGTaGGAACTGTGCCGGGCACGTATGGGTGGAATTCTG | + |
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Preference number: 6 (lower is better) Translates to: AECPSFFLCTEE*ELCRARMGGIL Trigger: CAGAATTCCACCCATACGTGCCCGGCACAGTTCGCACTCCTCTGTGCACAAAAAGAAAGAAGGACATTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114959.9 ENSMUST00000164223.8 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS CCA 72 bp | TCTGGGATTATTCCTTCAACGCGGTATAGGTTTCCGTaGAATATTCTAGAGGTCTTGCTGGAAACAGTTACC | + |
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Preference number: 6 (lower is better) Translates to: SGIIPSTRYRFP*NILEVLLETVT Trigger: GGTAACTGTTTCCAGCAAGACCTCTAGAATATTCCACGGAAACCTATACCGCGTTGAAGGAATAATCCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114959.9 ENSMUST00000164223.8 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS CAA 72 bp | GGTGGAATTCTGTACGTCTTTACGCCATCTTTCACATaGAGGAGGAAGCTTACTAAGTTGGAAGGCATAGAC | + |
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Preference number: 6 (lower is better) Translates to: GGILYVFTPSFT*RRKLTKLEGID Trigger: GTCTATGCCTTCCAACTTAGTAAGCTTCCTCCTCAATGTGAAAGATGGCGTAAAGACGTACAGAATTCCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114959.9 ENSMUST00000164223.8 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS CCA 72 bp | AAAGCCACGGATATAAGTCGAAGTTGGAGCATATCCTaGGAAGTCCACACTTTTAGTACTGATAATGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: KATDISRSWSIS*EVHTFSTDNVH Trigger: GTGGACATTATCAGTACTAAAAGTGTGGACTTCCCAGGATATGCTCCAACTTCGACTTATATCCGTGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000114959.9 ENSMUST00000164223.8 ENSMUST00000168249.9 ENSMUST00000174118.8 ENSMUST00000174667.2 |
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| CDS CCA 72 bp | AGAGGGATGATTAAAGCCACGGATATAAGTCGAAGTTaGAGCATATCCTGGGAAGTCCACACTTTTAGTACT | + |
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Preference number: 6 (lower is better) Translates to: RGMIKATDISRS*SISWEVHTFST Trigger: AGTACTAAAAGTGTGGACTTCCCAGGATATGCTCCAACTTCGACTTATATCCGTGGCTTTAATCATCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000114959.9 ENSMUST00000164223.8 ENSMUST00000168249.9 ENSMUST00000174118.8 ENSMUST00000174667.2 |
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| CDS CAA 90 bp | GCACGTATGGGTGGAATTCTGTACGTCTTTACGCCATCTTTCACATaGAGGAGGAAGCTTACTAAGTTGGAAGGCATAGACTTTTCAATT | + |
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Preference number: 6 (lower is better) Translates to: ARMGGILYVFTPSFT*RRKLTKLEGIDFSI Trigger: AATTGAAAAGTCTATGCCTTCCAACTTAGTAAGCTTCCTCCTCAATGTGAAAGATGGCGTAAAGACGTACAGAATTCCACCCATACGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114959.9 ENSMUST00000164223.8 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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| CDS CAA 72 bp | CATATGAGTGTGTCCGAATCAATCTTGTGTATCACATaGAACCCTTTCAATGATTTGTCCCATGAGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: HMSVSESILCIT*NPFNDLSHETL Trigger: CAGAGTCTCATGGGACAAATCATTGAAAGGGTTCAATGTGATACACAAGATTGATTCGGACACACTCATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114959.9 ENSMUST00000164223.8 ENSMUST00000168249.9 ENSMUST00000174118.8 |
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