Pregenerated sensors for STARD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046027Ensembl transcript IDs: ENSMUST00000075418.15, ENSMUST00000117410.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACCAGGTCTCAAGATGCCAAGTCAGCGGGCACGGAGCTTCCCCCTaGCCAGGACCCAGTCCTGCGAGACAAAGCTGTTGGATGAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: DQVSRCQVSGHGASP*PGPSPARQSCWMKR Trigger: CCTTTTCATCCAACAGCTTTGTCTCGCAGGACTGGGTCCTGGTCAGGGGGAAGCTCCGTGCCCGCTGACTTGGCATCTTGAGACCTGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR GCA 90 bp | CCAAGTCAGCGGGCACGGAGCTTCCCCCTGACCAGGACCCAGTCCTaGGAGACAAAGCTGTTGGATGAAAAGGCCAGTAAGCTTTACTCC | + |
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Preference number: 1 (lower is better) Translates to: PSQRARSFPLTRTQS*ETKLLDEKASKLYS Trigger: GGAGTAAAGCTTACTGGCCTTTTCATCCAACAGCTTTGTCTCGCAGGACTGGGTCCTGGTCAGGGGGAAGCTCCGTGCCCGCTGACTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR GCA 90 bp | TGTCCACAACCTTCCCTAACTCCTCAGAGGTCAGGGACCCAGGTTTaGCTGAGTCTCCTCCCCCAGGTCAGCGACCCAGCACAAAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: CPQPSLTPQRSGTQV*LSLLPQVSDPAQKL Trigger: AAGCTTTTGTGCTGGGTCGCTGACCTGGGGGAGGAGACTCAGGCAAACCTGGGTCCCTGACCTCTGAGGAGTTAGGGAAGGTTGTGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR GCA 90 bp | AAAGCCAGCTTGGTTTCGGCAGAGCTTGAAAGGTCTGAGGAATCGTaGCCCAGACCCCAGAAGACCCCCGGAAGTAGCCTCAGCCATTCA | + |
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Preference number: 1 (lower is better) Translates to: KASLVSAELERSEES*PRPQKTPGSSLSHS Trigger: TGAATGGCTGAGGCTACTTCCGGGGGTCTTCTGGGGTCTGGGGCACGATTCCTCAGACCTTTCAAGCTCTGCCGAAACCAAGCTGGCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR CCA 90 bp | TCTTGCCTCACCATGATGACTGAGGGCACAGTGAGGTACATGCCATaGGGCTCACCTCCCCAGAGTCTAGCATGCACACAGGAACTGCTG | + |
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Preference number: 1 (lower is better) Translates to: SCLTMMTEGTVRYMP*GSPPQSLACTQELL Trigger: CAGCAGTTCCTGTGTGCATGCTAGACTCTGGGGAGGTGAGCCCCATGGCATGTACCTCACTGTGCCCTCAGTCATCATGGTGAGGCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
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| 3UTR GCA 90 bp | CAGATCACCTGCATCCCCAAGGAGAGGGTGTCTCCAAAGTCACCTTaGAACAACAGCTCAGCTGCAGAGGGTTTTGGTGAAGCCATGGCC | + |
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Preference number: 1 (lower is better) Translates to: QITCIPKERVSPKSP*NNSSAAEGFGEAMA Trigger: GGCCATGGCTTCACCAAAACCCTCTGCAGCTGAGCTGTTGTTGCAAGGTGACTTTGGAGACACCCTCTCCTTGGGGATGCAGGTGATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR CCA 90 bp | CACCTTGCAACAACAGCTCAGCTGCAGAGGGTTTTGGTGAAGCCATaGCCTCTGACACAGGGTTCTCTCTCAAGTGAGTGTCTGTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: HLATTAQLQRVLVKP*PLTQGSLSSECLCP Trigger: AGGGCACAGACACTCACTTGAGAGAGAACCCTGTGTCAGAGGCCATGGCTTCACCAAAACCCTCTGCAGCTGAGCTGTTGTTGCAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR TCA 90 bp | AAAACTTTGGCTCCTCACAATTGCCAGACAGAGGAGTCCAGAGACTaGGCCTGCAGCCCAGCTCTGGGGAGACCACCAAATTTCCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: KTLAPHNCQTEESRD*ACSPALGRPPNFQE Trigger: TTCCTGGAAATTTGGTGGTCTCCCCAGAGCTGGGCTGCAGGCTCAGTCTCTGGACTCCTCTGTCTGGCAATTGTGAGGAGCCAAAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR GCA 90 bp | TCCATCAGCAGCCAGCTATCATCTGCTGTCATGAAATCCCTGCTGTaGCTTCCATCTTCAGTCTCTTGTGGCCAGATCACCTGCATCCCC | + |
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Preference number: 1 (lower is better) Translates to: SISSQLSSAVMKSLL*LPSSVSCGQITCIP Trigger: GGGGATGCAGGTGATCTGGCCACAAGAGACTGAAGATGGAAGGCACAGCAGGGATTTCATGACAGCAGATGATAGCTGGCTGCTGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR TCA 90 bp | GTTTTTCACACCGTGTTATCTCTGCTTGTGAAAGCCTTTCAGAGCTaGGAGAATATTCAGAAGGTCTCACAGAGCCCGGGGAAACCGAGG | + |
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Preference number: 1 (lower is better) Translates to: VFHTVLSLLVKAFQS*ENIQKVSQSPGKPR Trigger: CCTCGGTTTCCCCGGGCTCTGTGAGACCTTCTGAATATTCTCTCAGCTCTGAAAGGCTTTCACAAGCAGAGATAACACGGTGTGAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR GCA 90 bp | AAAAGCATATCCAGAAAGGGAACACAGGAGTCTGGGAACTCCAGATaGCAGAGGAAGCAGGACTTAGCGACCACAATGGATGATGATTCT | + |
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Preference number: 1 (lower is better) Translates to: KSISRKGTQESGNSR*QRKQDLATTMDDDS Trigger: AGAATCATCATCCATTGTGGTCGCTAAGTCCTGCTTCCTCTGGCATCTGGAGTTCCCAGACTCCTGTGTTCCCTTTCTGGATATGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
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| 3UTR TCA 90 bp | GGGTTAGAATTTCCGACTGCATCAAAAACTTATTTAGCCCCATCATaGGTGAGAACCATAGCCATACACCACTACAGCCCAACACCAGCC | + |
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Preference number: 1 (lower is better) Translates to: GLEFPTASKTYLAPS*VRTIAIHHYSPTPA Trigger: GGCTGGTGTTGGGCTGTAGTGGTGTATGGCTATGGTTCTCACTCATGATGGGGCTAAATAAGTTTTTGATGCAGTCGGAAATTCTAACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR CCA 90 bp | CAGGCACGGATGGACTATAGCTTTGATATCACTGCTGAAGACCCTTaGGTTAGAATTTCCGACTGCATCAAAAACTTATTTAGCCCCATC | + |
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Preference number: 1 (lower is better) Translates to: QARMDYSFDITAEDP*VRISDCIKNLFSPI Trigger: GATGGGGCTAAATAAGTTTTTGATGCAGTCGGAAATTCTAACCCAAGGGTCTTCAGCAGTGATATCAAAGCTATAGTCCATCCGTGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR GCA 90 bp | AGCTTTGATATCACTGCTGAAGACCCTTGGGTTAGAATTTCCGACTaGATCAAAAACTTATTTAGCCCCATCATGAGTGAGAACCATAGC | + |
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Preference number: 1 (lower is better) Translates to: SFDITAEDPWVRISD*IKNLFSPIMSENHS Trigger: GCTATGGTTCTCACTCATGATGGGGCTAAATAAGTTTTTGATGCAGTCGGAAATTCTAACCCAAGGGTCTTCAGCAGTGATATCAAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR GCA 90 bp | GTGTGTGTGCATGCAGATCTGTGTGCATGTGTGTATGTACACATGTaGACTGGAGTTCTGTCTTCCATGTTAAGAAGTAGTTTACATAAT | + |
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Preference number: 1 (lower is better) Translates to: VCVHADLCACVYVHM*TGVLSSMLRSSLHN Trigger: ATTATGTAAACTACTTCTTAACATGGAAGACAGAACTCCAGTGCACATGTGTACATACACACATGCACACAGATCTGCATGCACACACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR CAA 90 bp | ATGTCCACAACCTTCCCTAACTCCTCAGAGGTCAGGGACCCAGGTTaGCCTGAGTCTCCTCCCCCAGGTCAGCGACCCAGCACAAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: MSTTFPNSSEVRDPG*PESPPPGQRPSTKA Trigger: AGCTTTTGTGCTGGGTCGCTGACCTGGGGGAGGAGACTCAGGCAAACCTGGGTCCCTGACCTCTGAGGAGTTAGGGAAGGTTGTGGACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTGCATCCCCAAGGAGAGGGTGTCTCCAAAGTCACCTTGCAACAACAGCTCTTAAGGAGCTCTGGGTaGGGCCAGGGAATGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: HLHPQGEGVSKVTLQQQLLRSSG*GQGMLP Trigger: GGGGAGCATTCCCTGGCCTCACCCAGAGCTCCTTAA...GAGCTGTTGTTGCAAGGTGACTTTGGAGACACCCTCTCCTTGGGGATGCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTCTCAAGATGCCAAGTCAGCGGGCACGGAGCTTCCCCCTGACCAGGACCCACAGCCAGCTATCATCTaGTGTCATGAAATCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: RSQDAKSAGTELPPDQDPQPAII*CHEIPA Trigger: AGCAGGGATTTCATGACAGCAGATGATAGCTGGCTG...TGGGTCCTGGTCAGGGGGAAGCTCCGTGCCCGCTGACTTGGCATCTTGAGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR CAA 90 bp | CGGAGCTTCCCCCTGACCAGGACCCAGTCCTGCGAGACAAAGCTGTaGGATGAAAAGGCCAGTAAGCTTTACTCCATCAGCAGCCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: RSFPLTRTQSCETKL*DEKASKLYSISSQL Trigger: TAGCTGGCTGCTGATGGAGTAAAGCTTACTGGCCTTTTCATCCAACAGCTTTGTCTCGCAGGACTGGGTCCTGGTCAGGGGGAAGCTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR GCA 90 bp | CCACTACAGCCCAACACCAGCCTTGGTGAAGAGGATGGGACACAGGGCTGTCCATTGGCTCCTCACAATTaGCAGACAGAGGAGTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: PLQPNTSLGEEDGTQGCPLAPHN*QTEESR Trigger: TCTGGACTCCTCTGTCTGGCAATTGTGAGGAGCCAA...TGGACAGCCCTGTGTCCCATCCTCTTCACCAAGGCTGGTGTTGGGCTGTAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGGGTGTCTCCAAAGTCACCTTGCAACAACAGCTCAGCTGCAGAGGGTTTCTAGGAGCAGAGTCCTaGCTTGTACAGCTGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: GEGVSKVTLQQQLSCRGFLGAES*LVQLPP Trigger: GGGAGGCAGCTGTACAAGCCAGGACTCTGCTCCTAG...AAACCCTCTGCAGCTGAGCTGTTGTTGCAAGGTGACTTTGGAGACACCCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR CAA 90 bp | TTGCCTGAGTCTCCTCCCCCAGGTCAGCGACCCAGCACAAAAGCTTaGTCTCCAGACCCTCTCTTGAGACTGTTGACTACACAATCCGAG | + |
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Preference number: 2 (lower is better) Translates to: LPESPPPGQRPSTKA*SPDPLLRLLTTQSE Trigger: CTCGGATTGTGTAGTCAACAGTCTCAAGAGAGGGTCTGGAGACAAAGCTTTTGTGCTGGGTCGCTGACCTGGGGGAGGAGACTCAGGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGATGGCAGCACTGTGAAGAAGGGGCCTCCAGTAGCCCCAAAGCCAGCTTGGAGTAAGAATCTGTCTTaGTCTTCACATGGGCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: ADGSTVKKGPPVAPKPAWSKNLS*SSHGPR Trigger: CCTAGGCCCATGTGAAGATCAAGACAGATTCTTACT...CCAAGCTGGCTTTGGGGCTACTGGAGGCCCCTTCTTCACAGTGCTGCCATCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTTACAAGTCAGCAGATGGCAGCACTGTGAAGAAGGGGCCTCCAGTAGCCCCCTGCAGGGCTGGGTCTaGGTTTTCCCTCTTGAATCA | + |
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Preference number: 2 (lower is better) Translates to: SLQVSRWQHCEEGASSSPLQGWV*VFPLES Trigger: TGATTCAAGAGGGAAAACCCAGACCCAGCCCTGCAG...GGGGCTACTGGAGGCCCCTTCTTCACAGTGCTGCCATCTGCTGACTTGTAAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATACTTGCACAGCATAGCAGACATTCTTCCCTCCTTCCTAATGGCAGCAAAGGACTTGCCCTGGCCTaGCAGGCCTATGTGTGCACC | + |
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Preference number: 2 (lower is better) Translates to: CILAQHSRHSSLLPNGSKGLALA*QAYVCT Trigger: GGTGCACACATAGGCCTGGCAGGCCAGGGCAAGTCC...TTTGCTGCCATTAGGAAGGAGGGAAGAATGTCTGCTATGCTGTGCAAGTATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTGTAATTCCAGACCTGGGGAAGCAGAAAGATACTGGTCCCTGGAATTGTGGCCATAGAGGGACTTaGCCTGGCCTGCCAGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: QSVIPDLGKQKDTGPWNCGHRGT*PGLPGL Trigger: TAGGCCTGGCAGGCCAGGGCAAGTCCCTCTATGGCC...ACAATTCCAGGGACCAGTATCTTTCTGCTTCCCCAGGTCTGGAATTACACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGTTTGGCTTTGTTTCTGCCCACCAGAGACTCCAGCATCCCCAGGAAAACCATCTTAAGGAGCTCTaGGTGAGGCCAGGGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: LRFGFVSAHQRLQHPQENHLKEL*VRPGNA Trigger: AGCATTCCCTGGCCTCACCCAGAGCTCCTTAAGATG...GTTTTCCTGGGGATGCTGGAGTCTCTGGTGGGCAGAAACAAAGCCAAACCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTGTCTCCAAAGTCACCTTGCAACAACAGCTCAGCTGCAGAGGGTTTTGGTGATAGCCGACCTTGGCTaGGATGAGAAGTGGGGGATA | + |
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Preference number: 2 (lower is better) Translates to: GCLQSHLATTAQLQRVLVIADLG*DEKWGI Trigger: TATCCCCCACTTCTCATCCCAGCCAAGGTCGGCTAT...CACCAAAACCCTCTGCAGCTGAGCTGTTGTTGCAAGGTGACTTTGGAGACACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR CAA 90 bp | ATCTGCTGTCATGAAATCCCTGCTGTGCCTTCCATCTTCAGTCTCTaGTGGCCAGATCACCTGCATCCCCAAGGAGAGGGTGTCTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: ICCHEIPAVPSIFSL*WPDHLHPQGEGVSK Trigger: TTTGGAGACACCCTCTCCTTGGGGATGCAGGTGATCTGGCCACAAGAGACTGAAGATGGAAGGCACAGCAGGGATTTCATGACAGCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR TCA 90 bp | ATCAGCATCCAAACCCCAGGCAACAGGGCAGCAGCAAGAAAACCTGACAGATCTCTCTTCCGTGTCCTTTaGGGCTCAACAGCTGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: ISIQTPGNRAAARKPDRSLFRVL*GSTAGV Trigger: AACTCCAGCTGTTGAGCCTCAAAGGACACGGAAGAG...AGATCTGTCAGGTTTTCTTGCTGCTGCCCTGTTGCCTGGGGTTTGGATGCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
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| 3UTR-3UTR TCA 90 bp | CACCTGCATCCCCAAGGAGAGGGTGTCTCCAAAGTCACCTTGCAACAACAGCTCGATACAGGAGGCGAATaGAAAGTCCACCTTCATCTT | + |
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Preference number: 2 (lower is better) Translates to: HLHPQGEGVSKVTLQQQLDTGGE*KVHLHL Trigger: AAGATGAAGGTGGACTTTTCATTCGCCTCCTGTATC...GAGCTGTTGTTGCAAGGTGACTTTGGAGACACCCTCTCCTTGGGGATGCAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGAGAATCAGCTCCTTTGAAAACTTTGGCTCCTCACAATTGCCAGACAGAGTGTCTGTGCCCTGCTTaGTCTCCACTGCCCCCATTT | + |
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Preference number: 2 (lower is better) Translates to: GRESAPLKTLAPHNCQTECLCPA*SPLPPF Trigger: AAATGGGGGCAGTGGAGATCAAGCAGGGCACAGACA...CTCTGTCTGGCAATTGTGAGGAGCCAAAGTTTTCAAAGGAGCTGATTCTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR GCA 90 bp | GAATGGCAGACCTTGTGGTCAGTGTCAGATACAATAGGCGTGCATACTTGCACAAGGAACTGCTGGCCCTaGCTAGAGTCACTCATAGGG | + |
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Preference number: 2 (lower is better) Translates to: EWQTLWSVSDTIGVHTCTRNCWP*LESLIG Trigger: CCCTATGAGTGACTCTAGGCAGGGCCAGCAGTTCCT...TGTGCAAGTATGCACGCCTATTGTATCTGACACTGACCACAAGGTCTGCCATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
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| 3UTR-3UTR GCA 90 bp | TGCATACTTGCACAGCATAGCAGACATTCTTCCCTCCTTCCTAATGGCAGCAAACCCCAGAGTCTAGCATaGACACAGGAACTGCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: CILAQHSRHSSLLPNGSKPQSLA*TQELLA Trigger: GGCCAGCAGTTCCTGTGTGCATGCTAGACTCTGGGG...TTTGCTGCCATTAGGAAGGAGGGAAGAATGTCTGCTATGCTGTGCAAGTATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
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| 3UTR-3UTR GCA 90 bp | CACCTGCATCCCCAAGGAGAGGGTGTCTCCAAAGTCACCTTGCAACAACAGCTCGTGTATGTACACATGTaGACTGGAGTTCTGTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: HLHPQGEGVSKVTLQQQLVYVHM*TGVLSS Trigger: GGAAGACAGAACTCCAGTGCACATGTGTACATACAC...GAGCTGTTGTTGCAAGGTGACTTTGGAGACACCCTCTCCTTGGGGATGCAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTTACAAGTCAGCAGATGGCAGCACTGTGAAGAAGGGGCCTCCAGTAGCCCCATGAAATCCCTGCTGTaGCTTCCATCTTCAGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SLQVSRWQHCEEGASSSPMKSLL*LPSSVS Trigger: AGAGACTGAAGATGGAAGGCACAGCAGGGATTTCAT...GGGGCTACTGGAGGCCCCTTCTTCACAGTGCTGCCATCTGCTGACTTGTAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR CCA 90 bp | TTGACTACACAATCCGAGGATACTCAAGGACCAGGTCTCAAGATGCCAAGTCAGCTTCTGCTGCAGGGCTaGGTCTGGGTTTTCCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LTTQSEDTQGPGLKMPSQLLLQG*VWVFPL Trigger: AAGAGGGAAAACCCAGACCCAGCCCTGCAGCAGAAG...CTGACTTGGCATCTTGAGACCTGGTCCTTGAGTATCCTCGGATTGTGTAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR CCA 90 bp | CTACACAATCCGAGGATACTCAAGGACCAGGTCTCAAGATGCCAAGTCAGCGGGGCGAGACAAAGCTGTTaGATGAAAAGGCCAGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: LHNPRILKDQVSRCQVSGARQSC*MKRPVS Trigger: GCTTACTGGCCTTTTCATCCAACAGCTTTGTCTCGC...CCCGCTGACTTGGCATCTTGAGACCTGGTCCTTGAGTATCCTCGGATTGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGTTTGGCTTTGTTTCTGCCCACCAGAGACTCCAGCATCCCCAGGAAAACTTACAAGTCAGCAGATaGCAGCACTGTGAAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LRFGFVSAHQRLQHPQENLQVSR*QHCEEG Trigger: CCCTTCTTCACAGTGCTGCCATCTGCTGACTTGTAA...GTTTTCCTGGGGATGCTGGAGTCTCTGGTGGGCAGAAACAAAGCCAAACCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR TCA 90 bp | CTACACAATCCGAGGATACTCAAGGACCAGGTCTCAAGATGCCAAGTCAGCGGGTGTTATCTCTGCTTGTaGAAGCCTTTCAGAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LHNPRILKDQVSRCQVSGCYLCL*KPFRAE Trigger: CTCAGCTCTGAAAGGCTTTCACAAGCAGAGATAACA...CCCGCTGACTTGGCATCTTGAGACCTGGTCCTTGAGTATCCTCGGATTGTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR GCA 90 bp | TTGACTACACAATCCGAGGATACTCAAGGACCAGGTCTCAAGATGCCAAGTCAGGGTGAGGCCAGGGAATaGTCCCCAGTAAGAATCTGT | + |
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Preference number: 2 (lower is better) Translates to: LTTQSEDTQGPGLKMPSQGEARE*SPVRIC Trigger: ACAGATTCTTACTGGGGAGCATTCCCTGGCCTCACC...CTGACTTGGCATCTTGAGACCTGGTCCTTGAGTATCCTCGGATTGTGTAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGATCACAAACGGTAGATTGAAAGTATTTTTCCTTAAGGCTTATCCTGTGGGACGGAGGGTGGTGTaGGGGGATGGGCTGCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: EEITNGRLKVFFLKAYPVGRRVV*GDGLLL Trigger: GAGGAGCAGCCCATCCCCCCACACCACCCTCCGTCC...CACAGGATAAGCCTTAAGGAAAAATACTTTCAATCTACCGTTTGTGATCTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
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| 3UTR CAA 90 bp | ATGGCAGACCTTGTGGTCAGTGTCAGATACAATAGGCGTGCATACTaGCACAGCATAGCAGACATTCTTCCCTCCTTCCTAATGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: MADLVVSVRYNRRAY*HSIADILPSFLMAA Trigger: TGCTGCCATTAGGAAGGAGGGAAGAATGTCTGCTATGCTGTGCAAGTATGCACGCCTATTGTATCTGACACTGACCACAAGGTCTGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
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| 3UTR-3UTR GCA 90 bp | GAATGGCAGACCTTGTGGTCAGTGTCAGATACAATAGGCGTGCATACTTGCACAAGTCCCCAGCATTCTTaGCTCACCATGATGACTGAG | + |
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Preference number: 2 (lower is better) Translates to: EWQTLWSVSDTIGVHTCTSPQHS*LTMMTE Trigger: CTCAGTCATCATGGTGAGGCAAGAATGCTGGGGACT...TGTGCAAGTATGCACGCCTATTGTATCTGACACTGACCACAAGGTCTGCCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
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| 3UTR-3UTR GCA 90 bp | TGCATACTTGCACAGCATAGCAGACATTCTTCCCTCCTTCCTAATGGCAGCAAATCTGGGAACTCCAGATaGCAGAGGAAGCAGGACTTA | + |
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Preference number: 2 (lower is better) Translates to: CILAQHSRHSSLLPNGSKSGNSR*QRKQDL Trigger: TAAGTCCTGCTTCCTCTGGCATCTGGAGTTCCCAGA...TTTGCTGCCATTAGGAAGGAGGGAAGAATGTCTGCTATGCTGTGCAAGTATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTGTAATTCCAGACCTGGGGAAGCAGAAAGATACTGGTCCCTGGAATTGTCAGCACACAGGGCTCTaGACCACAAGGAATCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: QSVIPDLGKQKDTGPWNCQHTGL*TTRNQR Trigger: TCTTTGATTCCTTGTGGTCCAGAGCCCTGTGTGCTG...ACAATTCCAGGGACCAGTATCTTTCTGCTTCCCCAGGTCTGGAATTACACTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
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| 3UTR CAA 90 bp | GGAAAGCTAAAGAGAAACCCTTTGTCCCTAAAGGAATGGCAGACCTaGTGGTCAGTGTCAGATACAATAGGCGTGCATACTTGCACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GKLKRNPLSLKEWQT*WSVSDTIGVHTCTA Trigger: TGCTGTGCAAGTATGCACGCCTATTGTATCTGACACTGACCACAAGGTCTGCCATTCCTTTAGGGACAAAGGGTTTCTCTTTAGCTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR-3UTR CCA 90 bp | TATAGCTTTGATATCACTGCTGAAGACCCTTGGGTTAGAATTTCCGACTGCATCGCCCCAAAGCCAGCTTaGTTTCGGCAGAGCTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: YSFDITAEDPWVRISDCIAPKPA*FRQSLK Trigger: TTTCAAGCTCTGCCGAAACCAAGCTGGCTTTGGGGC...GATGCAGTCGGAAATTCTAACCCAAGGGTCTTCAGCAGTGATATCAAAGCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CAA 90 bp | AAAGATACTGGTCCCTGGAATTGTTGGTCATCCAATCTAGCCTATTaGGTGAGTCAAAGGCCAATGAGAAAGCTGGTCTCAAAAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: KDTGPWNCWSSNLAY*VSQRPMRKLVSKIP Trigger: TGGGATTTTTGAGACCAGCTTTCTCATTGGCCTTTGACTCACCAAATAGGCTAGATTGGATGACCAACAATTCCAGGGACCAGTATCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR-3UTR CAA 90 bp | GGGACCCAGGTTTGCCTGAGTCTCCTCCCCCAGGTCAGCGACCCAGCACAAAAGGAGCAGAGTCCTGGCTaGTACAGCTGCCTCCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GTQVCLSLLPQVSDPAQKEQSPG*YSCLPL Trigger: AAGAGGGAGGCAGCTGTACAAGCCAGGACTCTGCTC...CTTTTGTGCTGGGTCGCTGACCTGGGGGAGGAGACTCAGGCAAACCTGGGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR GCA 72 bp | CGGGCACGGAGCTTCCCCCTGACCAGGACCCAGTCCTaGGAGACAAAGCTGTTGGATGAAAAGGCCAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: RARSFPLTRTQS*ETKLLDEKASK Trigger: CTTACTGGCCTTTTCATCCAACAGCTTTGTCTCGCAGGACTGGGTCCTGGTCAGGGGGAAGCTCCGTGCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACCTTCCCTAACTCCTCAGAGGTCAGGGACCCAGGTTTGCCTGAGTCTCCTCGTGTCTGTGCCCTGCTaGATCTCCACTGCCCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: QPSLTPQRSGTQVCLSLLVSVPC*ISTAPI Trigger: AATGGGGGCAGTGGAGATCAAGCAGGGCACAGACAC...GAGGAGACTCAGGCAAACCTGGGTCCCTGACCTCTGAGGAGTTAGGGAAGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR TCA 72 bp | GCTCCTCACAATTGCCAGACAGAGGAGTCCAGAGACTaGGCCTGCAGCCCAGCTCTGGGGAGACCACCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: APHNCQTEESRD*ACSPALGRPPN Trigger: ATTTGGTGGTCTCCCCAGAGCTGGGCTGCAGGCTCAGTCTCTGGACTCCTCTGTCTGGCAATTGTGAGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CCA 72 bp | ACCATGATGACTGAGGGCACAGTGAGGTACATGCCATaGGGCTCACCTCCCCAGAGTCTAGCATGCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: TMMTEGTVRYMP*GSPPQSLACTQ Trigger: CTGTGTGCATGCTAGACTCTGGGGAGGTGAGCCCCATGGCATGTACCTCACTGTGCCCTCAGTCATCATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR-3UTR CAA 90 bp | CGGGCACGGAGCTTCCCCCTGACCAGGACCCAGTCCTGCGAGACAAAGCTGTTGGATATGTTCAGGCTCTaGGTAATCTGCTCACAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RARSFPLTRTQSCETKLLDMFRL*VICSQR Trigger: TCTTTGTGAGCAGATTACCAAGAGCCTGAACATATC...CAACAGCTTTGTCTCGCAGGACTGGGTCCTGGTCAGGGGGAAGCTCCGTGCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACAACCTTCCCTAACTCCTCAGAGGTCAGGGACCCAGGTTTGCCTGAGTCTCGTCTCCAAAGTCACCTaGCAACAACAGCTCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PQPSLTPQRSGTQVCLSLVSKVT*QQQLSC Trigger: GCAGCTGAGCTGTTGTTGCAAGGTGACTTTGGAGAC...GAGACTCAGGCAAACCTGGGTCCCTGACCTCTGAGGAGTTAGGGAAGGTTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR GCA 72 bp | TTTGTGAGGGCTAGTAGGGGGTCCAAGGTCTTCTGCTaGAGGGCTGGGTCTGGGTTTTCCCTCTTGAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: FVRASRGSKVFC*RAGSGFSLLNQ Trigger: CTGATTCAAGAGGGAAAACCCAGACCCAGCCCTGCAGCAGAAGACCTTGGACCCCCTACTAGCCCTCACAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACTACAGCCCAACACCAGCCTTGGTGAAGAGGATGGGACACAGGGCTGTCCATCTCCAGACCCTCTCTaGAGACTGTTGACTACACAA | + |
|
Preference number: 3 (lower is better) Translates to: PLQPNTSLGEEDGTQGCPSPDPL*RLLTTQ Trigger: TTGTGTAGTCAACAGTCTCAAGAGAGGGTCTGGAGA...TGGACAGCCCTGTGTCCCATCCTCTTCACCAAGGCTGGTGTTGGGCTGTAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR GCA 72 bp | TGCCTTCCATCTTCAGTCTCTTGTGGCCAGATCACCTaGATCCCCAAGGAGAGGGTGTCTCCAAAGTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: CLPSSVSCGQIT*IPKERVSPKSP Trigger: AGGTGACTTTGGAGACACCCTCTCCTTGGGGATGCAGGTGATCTGGCCACAAGAGACTGAAGATGGAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTGGTTTCGGCAGAGCTTGAAAGGTCTGAGGAATCGTGCCCCAGACCCCAGGCTCCTTTGAAAACTTaGGCTCCTCACAATTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLVSAELERSEESCPRPQAPLKT*APHNCQ Trigger: CTGGCAATTGTGAGGAGCCAAAGTTTTCAAAGGAGC...CTGGGGTCTGGGGCACGATTCCTCAGACCTTTCAAGCTCTGCCGAAACCAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR TCA 72 bp | GAGGGGAGCAGCTGGACTGTGAGGGTACTGTGTCTCTaGAGACAGTGTCAGTCAGCAGAGATCTTTCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: EGSSWTVRVLCL*RQCQSAEIFPF Trigger: GAAAGGAAAGATCTCTGCTGACTGACACTGTCTTCAGAGACACAGTACCCTCACAGTCCAGCTGCTCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR GCA 72 bp | TGCATCCCCAAGGAGAGGGTGTCTCCAAAGTCACCTTaGAACAACAGCTCAGCTGCAGAGGGTTTTGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: CIPKERVSPKSP*NNSSAAEGFGE Trigger: TTCACCAAAACCCTCTGCAGCTGAGCTGTTGTTGCAAGGTGACTTTGGAGACACCCTCTCCTTGGGGATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTTGTCTCCAGACCCTCTCTTGAGACTGTTGACTACACAATCCGAGGATACCAGCTGCAGAGGGTTTaGGTGAAGCCATGGCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SFVSRPSLETVDYTIRGYQLQRV*VKPWPL Trigger: CAGAGGCCATGGCTTCACCAAAACCCTCTGCAGCTG...GTATCCTCGGATTGTGTAGTCAACAGTCTCAAGAGAGGGTCTGGAGACAAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR TCA 72 bp | GGCCTCTTCCTCCATCAGGCAGAGAATCAGCTCCTTTaGAAACTTTGGCTCCTCACAATTGCCAGACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GLFLHQAENQLL*KLWLLTIARQR Trigger: CCTCTGTCTGGCAATTGTGAGGAGCCAAAGTTTTCAAAGGAGCTGATTCTCTGCCTGATGGAGGAAGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR GCA 72 bp | AGCCAGCTATCATCTGCTGTCATGAAATCCCTGCTGTaGCTTCCATCTTCAGTCTCTTGTGGCCAGATCACC | + |
|
Preference number: 3 (lower is better) Translates to: SQLSSAVMKSLL*LPSSVSCGQIT Trigger: GGTGATCTGGCCACAAGAGACTGAAGATGGAAGGCACAGCAGGGATTTCATGACAGCAGATGATAGCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CCA 72 bp | GTTTCAGCTCAGCCTCTAACTCTAGGAGCAGAGTCCTaGCTTGTACAGCTGCCTCCCTCTTTAGGTAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: VSAQPLTLGAES*LVQLPPSLGKV Trigger: GACTTTACCTAAAGAGGGAGGCAGCTGTACAAGCCAGGACTCTGCTCCTAGAGTTAGAGGCTGAGCTGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR GCA 72 bp | CCAACAGAGTATAATGCTCAGGTTTGGCTTTGTTTCTaGCCACCAGAGACTCCAGCATCCCCAGGAAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: PTEYNAQVWLCF*PPETPASPGKH Trigger: GTGTTTTCCTGGGGATGCTGGAGTCTCTGGTGGGCAGAAACAAAGCCAAACCTGAGCATTATACTCTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR TCA 72 bp | AATGAAAAGTCCACCTTCATCTTAAGGAGCTCTGGGTaGGGCCAGGGAATGCTCCCCAGTAAGAATCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: NEKSTFILRSSG*GQGMLPSKNLS Trigger: AGACAGATTCTTACTGGGGAGCATTCCCTGGCCTCACCCAGAGCTCCTTAAGATGAAGGTGGACTTTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CCA 72 bp | ATACAAAAGCATATCCAGAAAGGGAACACAGGAGTCTaGGAACTCCAGATGCCAGAGGAAGCAGGACTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: IQKHIQKGNTGV*ELQMPEEAGLS Trigger: GCTAAGTCCTGCTTCCTCTGGCATCTGGAGTTCCCAGACTCCTGTGTTCCCTTTCTGGATATGCTTTTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR TCA 72 bp | AGAATTCACACTCCTTCCCAAAGATACAAACTGGCCTaGGGCAGTTACAAGCCGGTTTCATGGGGATGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RIHTPSQRYKLA*GSYKPVSWGCE Trigger: TTCACATCCCCATGAAACCGGCTTGTAACTGCCTCAGGCCAGTTTGTATCTTTGGGAAGGAGTGTGAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR TCA 72 bp | GGAGCCAGCACCCACTCTGTTCACTATTTCTGCTCCTaGGCTCTTCAGCACTGTAACTTGAATTTAGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GASTHSVHYFCS*ALQHCNLNLGE Trigger: TTCTCCTAAATTCAAGTTACAGTGCTGAAGAGCTCAGGAGCAGAAATAGTGAACAGAGTGGGTGCTGGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CCA 72 bp | CTGGGGAAGCAGAAAGATACTGGTCCCTGGAATTGTTaGTCATCCAATCTAGCCTATTTGGTGAGTCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGKQKDTGPWNC*SSNLAYLVSQR Trigger: CCTTTGACTCACCAAATAGGCTAGATTGGATGACCAACAATTCCAGGGACCAGTATCTTTCTGCTTCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR TCA 72 bp | GAGATTGCGGGAAATTCTGAACAAGCCCCGTCAAAATaGAGCTGTGTCCTAATGAGCCCTTTGACTAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: EIAGNSEQAPSK*SCVLMSPLTKS Trigger: GGATTTAGTCAAAGGGCTCATTAGGACACAGCTTCATTTTGACGGGGCTTGTTCAGAATTTCCCGCAATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR CCA 72 bp | AAGTGTAATTCCAGACCTGGGGAAGCAGAAAGATACTaGTCCCTGGAATTGTTGGTCATCCAATCTAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: KCNSRPGEAERY*SLELLVIQSSL Trigger: TAGGCTAGATTGGATGACCAACAATTCCAGGGACCAGTATCTTTCTGCTTCCCCAGGTCTGGAATTACACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR TCA 72 bp | TTTCCGACTGCATCAAAAACTTATTTAGCCCCATCATaGGTGAGAACCATAGCCATACACCACTACAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FPTASKTYLAPS*VRTIAIHHYSP Trigger: TGGGCTGTAGTGGTGTATGGCTATGGTTCTCACTCATGATGGGGCTAAATAAGTTTTTGATGCAGTCGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CCA 72 bp | CAGCTGTCAGTAAGTAAAATGCTTGCCATGCAAGCATaGTCACCTGAACTTCATCTCCAGAGACAAGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QLSVSKMLAMQA*SPELHLQRQEE Trigger: TTCTTCTTGTCTCTGGAGATGAAGTTCAGGTGACCATGCTTGCATGGCAAGCATTTTACTTACTGACAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR CCA 72 bp | ATGGACTATAGCTTTGATATCACTGCTGAAGACCCTTaGGTTAGAATTTCCGACTGCATCAAAAACTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: MDYSFDITAEDP*VRISDCIKNLF Trigger: AAATAAGTTTTTGATGCAGTCGGAAATTCTAACCCAAGGGTCTTCAGCAGTGATATCAAAGCTATAGTCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR GCA 90 bp | GGCCATAGAGGGACTTGCCCTGGCCTGCCAGGCCTATGTGTGCACCACGGCAAGACCGCCTCACTCTCTTaGGTGGCCCAGGACGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GHRGTCPGLPGLCVHHGKTASLS*VAQDGS Trigger: GGACCCGTCCTGGGCCACGCAAGAGAGTGAGGCGGT...CTTGCCGTGGTGCACACATAGGCCTGGCAGGCCAGGGCAAGTCCCTCTATGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR GCA 90 bp | AGGTCTCAAGATGCCAAGTCAGCGGGCACGGAGCTTCCCCCTGACCAGGACCCAACCGCCTCACTCTCTTaGGTGGCCCAGGACGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSQDAKSAGTELPPDQDPTASLS*VAQDGS Trigger: GGACCCGTCCTGGGCCACGCAAGAGAGTGAGGCGGT...TGGGTCCTGGTCAGGGGGAAGCTCCGTGCCCGCTGACTTGGCATCTTGAGACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR GCA 90 bp | GGCCATAGAGGGACTTGCCCTGGCCTGCCAGGCCTATGTGTGCACCACGGCAAGCCGGAGCACCTTCTCTaGCACCGCCTCACTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GHRGTCPGLPGLCVHHGKPEHLL*HRLTLL Trigger: CAAGAGAGTGAGGCGGTGGCAGAGAAGGTGCTCCGG...CTTGCCGTGGTGCACACATAGGCCTGGCAGGCCAGGGCAAGTCCCTCTATGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR TCA 90 bp | GGCCATAGAGGGACTTGCCCTGGCCTGCCAGGCCTATGTGTGCACCACGGCAAGCCACTCAGGTCTGTCTaGAAGAATGTGACCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GHRGTCPGLPGLCVHHGKPLRSV*KNVTRL Trigger: CAACCTGGTCACATTCTTTCAGACAGACCTGAGTGG...CTTGCCGTGGTGCACACATAGGCCTGGCAGGCCAGGGCAAGTCCCTCTATGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR CCA 90 bp | TCACCTCCCCAGAGTCTAGCATGCACACAGGAACTGCTGGCCCTGCCTAGAGTCTGGCAGCTGAGGGCGTaGAGGTTCTGCTCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: SPPQSLACTQELLALPRVWQLRA*RFCSHT Trigger: TGTGTGTGAGCAGAACCTCCACGCCCTCAGCTGCCA...GACTCTAGGCAGGGCCAGCAGTTCCTGTGTGCATGCTAGACTCTGGGGAGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR CCA 90 bp | GCAGATGGCAGCACTGTGAAGAAGGGGCCTCCAGTAGCCCCAAAGCCAGCTTGGTCGGTACAGATTCCCTaGAAACTCCTCAGATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ADGSTVKKGPPVAPKPAWSVQIP*KLLRWP Trigger: AGGCCATCTGAGGAGTTTCCAGGGAATCTGTACCGA...CCAAGCTGGCTTTGGGGCTACTGGAGGCCCCTTCTTCACAGTGCTGCCATCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR CCA 90 bp | TCACCTCCCCAGAGTCTAGCATGCACACAGGAACTGCTGGCCCTGCCTAGAGTCTCGGTACAGATTCCCTaGAAACTCCTCAGATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPPQSLACTQELLALPRVSVQIP*KLLRWP Trigger: AGGCCATCTGAGGAGTTTCCAGGGAATCTGTACCGA...GACTCTAGGCAGGGCCAGCAGTTCCTGTGTGCATGCTAGACTCTGGGGAGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR CCA 90 bp | TCACCTCCCCAGAGTCTAGCATGCACACAGGAACTGCTGGCCCTGCCTAGAGTCTTTGTTGGGATCCCCTaGCAGTGGTTCACAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPPQSLACTQELLALPRVFVGIP*QWFTEA Trigger: TGCTTCTGTGAACCACTGCCAGGGGATCCCAACAAA...GACTCTAGGCAGGGCCAGCAGTTCCTGTGTGCATGCTAGACTCTGGGGAGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR CAA 72 bp | TGTGAAGAAGGGGCCTCCAGTAGCCCCAAAGCCAGCTaGGTTTCGGCAGAGCTTGAAAGGTCTGAGGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: CEEGASSSPKAS*VSAELERSEES Trigger: CGATTCCTCAGACCTTTCAAGCTCTGCCGAAACCAAGCTGGCTTTGGGGCTACTGGAGGCCCCTTCTTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCACCTCCCCAGAGTCTAGCATGCACACAGGAACTGCTGGCCCTGCCTAGACACACAGCATATCCGTaGTGCTCTGGACAATTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSPPQSLACTQELLALPRHTAYP*CSGQFQ Trigger: TTGAAATTGTCCAGAGCATCACGGATATGCTGTGTG...TCTAGGCAGGGCCAGCAGTTCCTGTGTGCATGCTAGACTCTGGGGAGGTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR GCA 90 bp | GGCCATAGAGGGACTTGCCCTGGCCTGCCAGGCCTATGTGTGCACCACGGCAAGGGACAATTTCAAAGCTaGTCACATTATCATCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GHRGTCPGLPGLCVHHGKGQFQS*SHYHPT Trigger: AGTGGGATGATAATGTGAGCAGCTTTGAAATTGTCC...CTTGCCGTGGTGCACACATAGGCCTGGCAGGCCAGGGCAAGTCCCTCTATGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR CAA 72 bp | CATGAAATCCCTGCTGTGCCTTCCATCTTCAGTCTCTaGTGGCCAGATCACCTGCATCCCCAAGGAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HEIPAVPSIFSL*WPDHLHPQGEG Trigger: ACCCTCTCCTTGGGGATGCAGGTGATCTGGCCACAAGAGACTGAAGATGGAAGGCACAGCAGGGATTTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CAA 72 bp | CCCCTGACCAGGACCCAGTCCTGCGAGACAAAGCTGTaGGATGAAAAGGCCAGTAAGCTTTACTCCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLTRTQSCETKL*DEKASKLYSIS Trigger: GCTGATGGAGTAAAGCTTACTGGCCTTTTCATCCAACAGCTTTGTCTCGCAGGACTGGGTCCTGGTCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CAA 72 bp | TCTCCTCCCCCAGGTCAGCGACCCAGCACAAAAGCTTaGTCTCCAGACCCTCTCTTGAGACTGTTGACTACA | + |
|
Preference number: 4 (lower is better) Translates to: SPPPGQRPSTKA*SPDPLLRLLTT Trigger: TGTAGTCAACAGTCTCAAGAGAGGGTCTGGAGACAAAGCTTTTGTGCTGGGTCGCTGACCTGGGGGAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR GCA 90 bp | GATGAAAAGGCCAGTAAGCTTTACTCCATCAGCAGCCAGCTATCATCTGCTGTCCCGGAGCACCTTCTCTaGCACCGCCTCACTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DEKASKLYSISSQLSSAVPEHLL*HRLTLL Trigger: CAAGAGAGTGAGGCGGTGGCAGAGAAGGTGCTCCGG...GACAGCAGATGATAGCTGGCTGCTGATGGAGTAAAGCTTACTGGCCTTTTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCTCAGCCTCTAACTCTAGGAGCAGAGTCCTGGCTTGTACAGCTGCCTCCCAAGCCAAAAGCCGTGTaGAGATTGCTTCACAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SAQPLTLGAESWLVQLPPKPKAV*RLLHKC Trigger: ACATTTGTGAAGCAATCTTCACACGGCTTTTGGCTT...GGGAGGCAGCTGTACAAGCCAGGACTCTGCTCCTAGAGTTAGAGGCTGAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGCATCCAAACCCCAGGCAACAGGGCAGCAGCAAGAAAACCTGACAGATCTCTTTGGGGGACACAATaGATGTTCCACATGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISIQTPGNRAAARKPDRSLWGTQ*MFHMGS Trigger: GCTACCCATGTGGAACATCCATTGTGTCCCCCAAAG...AGATCTGTCAGGTTTTCTTGCTGCTGCCCTGTTGCCTGGGGTTTGGATGCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR TCA 90 bp | CTCAGGTTTGGCTTTGTTTCTGCCCACCAGAGACTCCAGCATCCCCAGGAAAACCACACAGCATATCCGTaGTGCTCTGGACAATTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRFGFVSAHQRLQHPQENHTAYP*CSGQFQ Trigger: TTGAAATTGTCCAGAGCATCACGGATATGCTGTGTG...GTTTTCCTGGGGATGCTGGAGTCTCTGGTGGGCAGAAACAAAGCCAAACCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR GCA 90 bp | CCACAACCTTCCCTAACTCCTCAGAGGTCAGGGACCCAGGTTTGCCTGAGTCTCGGACAATTTCAAAGCTaGTCACATTATCATCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PQPSLTPQRSGTQVCLSLGQFQS*SHYHPT Trigger: AGTGGGATGATAATGTGAGCAGCTTTGAAATTGTCC...GAGACTCAGGCAAACCTGGGTCCCTGACCTCTGAGGAGTTAGGGAAGGTTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGGGGATATGTTCAGGCTCTTGGTAATCTGCTCACAAAGATACAGGAGGCGCTTTGGGGGACACAATaGATGTTCCACATGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGGYVQALGNLLTKIQEALWGTQ*MFHMGS Trigger: GCTACCCATGTGGAACATCCATTGTGTCCCCCAAAG...CGCCTCCTGTATCTTTGTGAGCAGATTACCAAGAGCCTGAACATATCCCCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CAA 72 bp | AGAATCAGCTCCTTTGAAAACTTTGGCTCCTCACAATaGCCAGACAGAGGAGTCCAGAGACTGAGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RISSFENFGSSQ*PDRGVQRLSLQ Trigger: CTGCAGGCTCAGTCTCTGGACTCCTCTGTCTGGCAATTGTGAGGAGCCAAAGTTTTCAAAGGAGCTGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CAA 72 bp | AGGCCTCTTCCTCCATCAGGCAGAGAATCAGCTCCTTaGAAAACTTTGGCTCCTCACAATTGCCAGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLPPSGRESAP*KTLAPHNCQTE Trigger: CTCTGTCTGGCAATTGTGAGGAGCCAAAGTTTTCAAAGGAGCTGATTCTCTGCCTGATGGAGGAAGAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CAA 72 bp | GTTTTGCTTGTTGGTACCCCAGTTAGGTGTCATCCCTaGGAGCCAGCACCCACTCTGTTCACTATTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLLVGTPVRCHP*EPAPTLFTISA Trigger: AGCAGAAATAGTGAACAGAGTGGGTGCTGGCTCCAAGGGATGACACCTAACTGGGGTACCAACAAGCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR TCA 90 bp | TGCATACTTGCACAGCATAGCAGACATTCTTCCCTCCTTCCTAATGGCAGCAAATGGCCTCCAGGAAATTaGAACTCCATTGCCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CILAQHSRHSSLLPNGSKWPPGN*NSIAFP Trigger: CGGGAAGGCAATGGAGTTTCAATTTCCTGGAGGCCA...TTTGCTGCCATTAGGAAGGAGGGAAGAATGTCTGCTATGCTGTGCAAGTATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR GCA 90 bp | ATAGCAGACATTCTTCCCTCCTTCCTAATGGCAGCAAAGCCTGAGGGGCCAGGAAAATTGAAACTCCATTaGCTTCCCGACACTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IADILPSFLMAAKPEGPGKLKLH*LPDTSS Trigger: GGAAGAAGTGTCGGGAAGGCAATGGAGTTTCAATTT...TCCTGGCCCCTCAGGCTTTGCTGCCATTAGGAAGGAGGGAAGAATGTCTGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR CCA 90 bp | TATAGCTTTGATATCACTGCTGAAGACCCTTGGGTTAGAATTTCCGACTGCATCTGGCAGCTGAGGGCGTaGAGGTTCTGCTCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: YSFDITAEDPWVRISDCIWQLRA*RFCSHT Trigger: TGTGTGTGAGCAGAACCTCCACGCCCTCAGCTGCCA...GATGCAGTCGGAAATTCTAACCCAAGGGTCTTCAGCAGTGATATCAAAGCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGCATCCAAACCCCAGGCAACAGGGCAGCAGCAAGAAAACCTGACAGATCTAATGGATGTTCCACATaGGTAGCATTGGAGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ISIQTPGNRAAARKPDRSNGCST*VALELM Trigger: CATCAGCTCCAATGCTACCCATGTGGAACATCCATT...AGATCTGTCAGGTTTTCTTGCTGCTGCCCTGTTGCCTGGGGTTTGGATGCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR CCA 90 bp | AGTGGGGGATATGTTCAGGCTCTTGGTAATCTGCTCACAAAGATACAGGAGGCGACAGAAGCACCCGCATaGATGGTTAAATCCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGGYVQALGNLLTKIQEATEAPA*MVKSSH Trigger: GTGAGAGGATTTAACCATCCATGCGGGTGCTTCTGT...CGCCTCCTGTATCTTTGTGAGCAGATTACCAAGAGCCTGAACATATCCCCCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CAA 72 bp | CGACCCAGCACAAAAGCTTTGTCTCCAGACCCTCTCTaGAGACTGTTGACTACACAATCCGAGGATACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPSTKALSPDPL*RLLTTQSEDTQ Trigger: TTGAGTATCCTCGGATTGTGTAGTCAACAGTCTCAAGAGAGGGTCTGGAGACAAAGCTTTTGTGCTGGGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR TCA 90 bp | CACCGTGTTATCTCTGCTTGTGAAAGCCTTTCAGAGCTGAGAGAATATTCAGAATGGCCTCCAGGAAATTaGAACTCCATTGCCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HRVISACESLSELREYSEWPPGN*NSIAFP Trigger: CGGGAAGGCAATGGAGTTTCAATTTCCTGGAGGCCA...TTCTGAATATTCTCTCAGCTCTGAAAGGCTTTCACAAGCAGAGATAACACGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCCAACAACAGTGAGAAGAACAAAGGTAGAGAGAGTAGGGGAATTATTAAAAAGCTTCATGGCAGCTaGGGGCGTGGAGGTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSNNSEKNKGRESRGIIKKLHGS*GRGGSA Trigger: AGCAGAACCTCCACGCCCTCAGCTGCCATGAAGCTT...TTTAATAATTCCCCTACTCTCTCTACCTTTGTTCTTCTCACTGTTGTTGGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR CCA 90 bp | CACCGTGTTATCTCTGCTTGTGAAAGCCTTTCAGAGCTGAGAGAATATTCAGAAGCCGATGATGTCACCTaGCAGTGGTTCACAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HRVISACESLSELREYSEADDVT*QWFTEA Trigger: TGCTTCTGTGAACCACTGCCAGGTGACATCATCGGC...TTCTGAATATTCTCTCAGCTCTGAAAGGCTTTCACAAGCAGAGATAACACGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CAA 72 bp | GGTCCCTGGAATTGTTGGTCATCCAATCTAGCCTATTaGGTGAGTCAAAGGCCAATGAGAAAGCTGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPWNCWSSNLAY*VSQRPMRKLVS Trigger: TGAGACCAGCTTTCTCATTGGCCTTTGACTCACCAAATAGGCTAGATTGGATGACCAACAATTCCAGGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR CAA 72 bp | CCTGGGGAAGCAGAAAGATACTGGTCCCTGGAATTGTaGGTCATCCAATCTAGCCTATTTGGTGAGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGEAERYWSLEL*VIQSSLFGESK Trigger: CTTTGACTCACCAAATAGGCTAGATTGGATGACCAACAATTCCAGGGACCAGTATCTTTCTGCTTCCCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR CAA 72 bp | AGACCTGGGGAAGCAGAAAGATACTGGTCCCTGGAATaGTTGGTCATCCAATCTAGCCTATTTGGTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPGEAERYWSLE*LVIQSSLFGES Trigger: TGACTCACCAAATAGGCTAGATTGGATGACCAACAATTCCAGGGACCAGTATCTTTCTGCTTCCCCAGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR CAA 72 bp | ACAAAAGCTTTGTCTCCAGACCCTCTCTTGAGACTGTaGACTACACAATCCGAGGATACTCAAGGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKALSPDPLLRL*TTQSEDTQGPG Trigger: ACCTGGTCCTTGAGTATCCTCGGATTGTGTAGTCAACAGTCTCAAGAGAGGGTCTGGAGACAAAGCTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR GCA 90 bp | TTGACTACACAATCCGAGGATACTCAAGGACCAGGTCTCAAGATGCCAAGTCAGAAGCCGTGTGAAGATTaGTTCACAAATGTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTTQSEDTQGPGLKMPSQKPCED*FTNVSA Trigger: TGCTGAGACATTTGTGAAGCAATCTTCACACGGCTT...CTGACTTGGCATCTTGAGACCTGGTCCTTGAGTATCCTCGGATTGTGTAGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR GCA 90 bp | GATGAAAAGGCCAGTAAGCTTTACTCCATCAGCAGCCAGCTATCATCTGCTGTCTATCTCCTTGCTGAGTaGAGAAGAAAGAGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DEKASKLYSISSQLSSAVYLLAE*RRKSSS Trigger: GGAAGAACTCTTTCTTCTGCACTCAGCAAGGAGATA...GACAGCAGATGATAGCTGGCTGCTGATGGAGTAAAGCTTACTGGCCTTTTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR CCA 90 bp | GAATGGCAGACCTTGTGGTCAGTGTCAGATACAATAGGCGTGCATACTTGCACAAAGCACCCGCATGGATaGTTAAATCCTCTCACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EWQTLWSVSDTIGVHTCTKHPHG*LNPLTK Trigger: TTTTGTGAGAGGATTTAACCATCCATGCGGGTGCTT...TGTGCAAGTATGCACGCCTATTGTATCTGACACTGACCACAAGGTCTGCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGAATCAGCTCCTTTGAAAACTTTGGCTCCTCACAATTGCCAGACAGAGAAGCACCCGCATGGATaGTTAAATCCTCTCACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRESAPLKTLAPHNCQTEKHPHG*LNPLTK Trigger: TTTTGTGAGAGGATTTAACCATCCATGCGGGTGCTT...CTCTGTCTGGCAATTGTGAGGAGCCAAAGTTTTCAAAGGAGCTGATTCTCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| 3UTR CAA 72 bp | AAGAGAAACCCTTTGTCCCTAAAGGAATGGCAGACCTaGTGGTCAGTGTCAGATACAATAGGCGTGCATACT | + |
|
Preference number: 4 (lower is better) Translates to: KRNPLSLKEWQT*WSVSDTIGVHT Trigger: AGTATGCACGCCTATTGTATCTGACACTGACCACAAGGTCTGCCATTCCTTTAGGGACAAAGGGTTTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR CCA 90 bp | GTAAGCTTAATATGGAGACAAAACCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACAGAAGCACCCGCATaGATGGTTAAATCCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSLIWRQNQRERERERERTEAPA*MVKSSH Trigger: GTGAGAGGATTTAACCATCCATGCGGGTGCTTCTGT...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGTTTTGTCTCCATATTAAGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR CCA 90 bp | GAAGAGATCACAAACGGTAGATTGAAAGTATTTTTCCTTAAGGCTTATCCTGTGCCAGGTTGGTTTTGTTaGGATCCCCTGGCAGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EEITNGRLKVFFLKAYPVPGWFC*DPLAVV Trigger: AACCACTGCCAGGGGATCCCAACAAAACCAACCTGG...CACAGGATAAGCCTTAAGGAAAAATACTTTCAATCTACCGTTTGTGATCTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR GCA 90 bp | TGCTCCAACAACAGTGAGAAGAACAAAGGTAGAGAGAGTAGGGGAATTATTAAAATGGAACTTCCTCACTaGCTTCTGAAGGTTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSNNSEKNKGRESRGIIKMELPH*LLKVGV Trigger: TACCCCAACCTTCAGAAGGCAGTGAGGAAGTTCCAT...TTTAATAATTCCCCTACTCTCTCTACCTTTGTTCTTCTCACTGTTGTTGGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| 3UTR CAA 72 bp | GAGATGATTCTGATGGAAGAGATCACAAACGGTAGATaGAAAGTATTTTTCCTTAAGGCTTATCCTGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EMILMEEITNGR*KVFFLKAYPVV Trigger: AACCACAGGATAAGCCTTAAGGAAAAATACTTTCAATCTACCGTTTGTGATCTCTTCCATCAGAATCATCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR CAA 90 bp | CGGGCACGGAGCTTCCCCCTGACCAGGACCCAGTCCTGCGAGACAAAGCTGTTGATGGCCTCCAGGAAATaGAAACTCCATTGCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RARSFPLTRTQSCETKLLMASRK*KLHCLP Trigger: GGGAAGGCAATGGAGTTTCAATTTCCTGGAGGCCAT...CAACAGCTTTGTCTCGCAGGACTGGGTCCTGGTCAGGGGGAAGCTCCGTGCCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS TCA 90 bp | TCACAAATGTCTCAGCAGCGCACACCTCTTCCCACCTGTTGCCGATaGTGTCACCTGGCAGTGGTTCACAGAAGCACCCGCATGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SQMSQQRTPLPTCCR*CHLAVVHRSTRMDG Trigger: ACCATCCATGCGGGTGCTTCTGTGAACCACTGCCAGGTGACATCATCGGCAACAGGTGGGAAGAGGTGTGCGCTGCTGAGACATTTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS GCA 90 bp | GGAACTTCCTCACTGCCTTCTGAAGGTTGGGGTAGAACTCAGCCATaGTTCGAGGGAAGAAGGAGTCCACCACACTCTGAGGGAGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTSSLPSEGWGRTQP*FEGRRSPPHSEGGS Trigger: GCTACCTCCCTCAGAGTGTGGTGGACTCCTTCTTCCCTCGAAGCATGGCTGAGTTCTACCCCAACCTTCAGAAGGCAGTGAGGAAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS CCA 90 bp | CTCAGCAGCGCACACCTCTTCCCACCTGTTGCCGATGATGTCACCTaGCAGTGGTTCACAGAAGCACCCGCATGGATGGTTAAATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSAHLFPPVADDVT*QWFTEAPAWMVKSS Trigger: AGAGGATTTAACCATCCATGCGGGTGCTTCTGTGAACCACTGCCAGGTGACATCATCGGCAACAGGTGGGAAGAGGTGTGCGCTGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS TCA 90 bp | CACCAAGTCCACAAAGTCCCTGGGAGAAATAAGCTTCATGGCAGCTaGGGGCGTGGAGGTTCTGCTCACACACAGCATATCCGTGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: HQVHKVPGRNKLHGS*GRGGSAHTQHIRDA Trigger: AGCATCACGGATATGCTGTGTGTGAGCAGAACCTCCACGCCCTCAGCTGCCATGAAGCTTATTTCTCCCAGGGACTTTGTGGACTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075418.15 ENSMUST00000117410.2 |
||
| CDS CCA 90 bp | CCGATGATGTCACCTGGCAGTGGTTCACAGAAGCACCCGCATGGATaGTTAAATCCTCTCACAAAACCGGGCTTTGGGGGACACAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: PMMSPGSGSQKHPHG*LNPLTKPGFGGHNG Trigger: TCCATTGTGTCCCCCAAAGCCCGGTTTTGTGAGAGGATTTAACCATCCATGCGGGTGCTTCTGTGAACCACTGCCAGGTGACATCATCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS CCA 90 bp | GTTGCCGATGATGTCACCTGGCAGTGGTTCACAGAAGCACCCGCATaGATGGTTAAATCCTCTCACAAAACCGGGCTTTGGGGGACACAA | + |
|
Preference number: 5 (lower is better) Translates to: VADDVTWQWFTEAPA*MVKSSHKTGLWGTQ Trigger: TTGTGTCCCCCAAAGCCCGGTTTTGTGAGAGGATTTAACCATCCATGCGGGTGCTTCTGTGAACCACTGCCAGGTGACATCATCGGCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS CCA 90 bp | AGCGCACACCTCTTCCCACCTGTTGCCGATGATGTCACCTGGCAGTaGTTCACAGAAGCACCCGCATGGATGGTTAAATCCTCTCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: SAHLFPPVADDVTWQ*FTEAPAWMVKSSHK Trigger: TTTGTGAGAGGATTTAACCATCCATGCGGGTGCTTCTGTGAACCACTGCCAGGTGACATCATCGGCAACAGGTGGGAAGAGGTGTGCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR CAA 90 bp | TTGACTACACAATCCGAGGATACTCAAGGACCAGGTCTCAAGATGCCAAGTCAGACCTCTTCCCACCTGTaGCCGATGATGTCACCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTTQSEDTQGPGLKMPSQTSSHL*PMMSPG Trigger: GCCAGGTGACATCATCGGCAACAGGTGGGAAGAGGT...CTGACTTGGCATCTTGAGACCTGGTCCTTGAGTATCCTCGGATTGTGTAGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS TCA 90 bp | TGGCAGCTGAGGGCGTGGAGGTTCTGCTCACACACAGCATATCCGTaGTGCTCTGGACAATTTCAAAGCTGCTCACATTATCATCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: WQLRAWRFCSHTAYP*CSGQFQSCSHYHPT Trigger: AGTGGGATGATAATGTGAGCAGCTTTGAAATTGTCCAGAGCATCACGGATATGCTGTGTGTGAGCAGAACCTCCACGCCCTCAGCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075418.15 ENSMUST00000117410.2 |
||
| CDS CCA 90 bp | TGGATGGTTAAATCCTCTCACAAAACCGGGCTTTGGGGGACACAATaGATGTTCCACATGGGTAGCATTGGAGCTGATGGTGCCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WMVKSSHKTGLWGTQ*MFHMGSIGADGAIL Trigger: GAGGATGGCACCATCAGCTCCAATGCTACCCATGTGGAACATCCATTGTGTCCCCCAAAGCCCGGTTTTGTGAGAGGATTTAACCATCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075418.15 ENSMUST00000117410.2 |
||
| CDS CCA 90 bp | GAAGCACCCGCATGGATGGTTAAATCCTCTCACAAAACCGGGCTTTaGGGGACACAATGGATGTTCCACATGGGTAGCATTGGAGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EAPAWMVKSSHKTGL*GTQWMFHMGSIGAD Trigger: ATCAGCTCCAATGCTACCCATGTGGAACATCCATTGTGTCCCCCAAAGCCCGGTTTTGTGAGAGGATTTAACCATCCATGCGGGTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075418.15 ENSMUST00000117410.2 |
||
| CDS-3UTR CAA 90 bp | ATCAGCATCCAAACCCCAGGCAACAGGGCAGCAGCAAGAAAACCTGACAGATCTGAAATTGAAACTCCATaGCCTTCCCGACACTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISIQTPGNRAAARKPDRSEIETP*PSRHFF Trigger: GAAGAAGTGTCGGGAAGGCAATGGAGTTTCAATTTC...AGATCTGTCAGGTTTTCTTGCTGCTGCCCTGTTGCCTGGGGTTTGGATGCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR CAA 90 bp | GATGAAAAGGCCAGTAAGCTTTACTCCATCAGCAGCCAGCTATCATCTGCTGTCGAAATTGAAACTCCATaGCCTTCCCGACACTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DEKASKLYSISSQLSSAVEIETP*PSRHFF Trigger: GAAGAAGTGTCGGGAAGGCAATGGAGTTTCAATTTC...GACAGCAGATGATAGCTGGCTGCTGATGGAGTAAAGCTTACTGGCCTTTTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAGATCACAAACGGTAGATTGAAAGTATTTTTCCTTAAGGCTTATCCTGTGATGGCCTCCAGGAAATaGAAACTCCATTGCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EEITNGRLKVFFLKAYPVMASRK*KLHCLP Trigger: GGGAAGGCAATGGAGTTTCAATTTCCTGGAGGCCAT...CACAGGATAAGCCTTAAGGAAAAATACTTTCAATCTACCGTTTGTGATCTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS-3UTR CAA 90 bp | TGCTCCAACAACAGTGAGAAGAACAAAGGTAGAGAGAGTAGGGGAATTATTAAAAAGAATGTGACCAGGTaGGTTTTGTTGGGATCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSNNSEKNKGRESRGIIKKNVTR*VLLGSP Trigger: AGGGGATCCCAACAAAACCAACCTGGTCACATTCTT...TTTAATAATTCCCCTACTCTCTCTACCTTTGTTCTTCTCACTGTTGTTGGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
||
| CDS GCA 72 bp | GCCCGACGCGTCCCGCCGGTACCGGAGCACCTTCTCTaGCACCGCCTCACTCTCTTGCGTGGCCCAGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: ARRVPPVPEHLL*HRLTLLRGPGR Trigger: CCGTCCTGGGCCACGCAAGAGAGTGAGGCGGTGGCAGAGAAGGTGCTCCGGTACCGGCGGGACGCGTCGGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075418.15 ENSMUST00000117410.2 |
||
| CDS TCA 72 bp | TCTCAGCAGCGCACACCTCTTCCCACCTGTTGCCGATaGTGTCACCTGGCAGTGGTTCACAGAAGCACCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SQQRTPLPTCCR*CHLAVVHRSTR Trigger: GCGGGTGCTTCTGTGAACCACTGCCAGGTGACATCATCGGCAACAGGTGGGAAGAGGTGTGCGCTGCTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS CCA 72 bp | GCACACCTCTTCCCACCTGTTGCCGATGATGTCACCTaGCAGTGGTTCACAGAAGCACCCGCATGGATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AHLFPPVADDVT*QWFTEAPAWMV Trigger: AACCATCCATGCGGGTGCTTCTGTGAACCACTGCCAGGTGACATCATCGGCAACAGGTGGGAAGAGGTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
||
| CDS CCA 72 bp | GGGATCCCCTGGCAGTGGTTCACAGAAGCACCCGCATaGATGGTTAAATCCTCTCACAAAACCGGGCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GIPWQWFTEAPA*MVKSSHKTGLW Trigger: CCAAAGCCCGGTTTTGTGAGAGGATTTAACCATCCATGCGGGTGCTTCTGTGAACCACTGCCAGGGGATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075418.15 |
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| CDS CCA 72 bp | CTCTTCCCACCTGTTGCCGATGATGTCACCTGGCAGTaGTTCACAGAAGCACCCGCATGGATGGTTAAATCC | + |
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Preference number: 6 (lower is better) Translates to: LFPPVADDVTWQ*FTEAPAWMVKS Trigger: GGATTTAACCATCCATGCGGGTGCTTCTGTGAACCACTGCCAGGTGACATCATCGGCAACAGGTGGGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| CDS CAA 72 bp | ACAAATGTCTCAGCAGCGCACACCTCTTCCCACCTGTaGCCGATGATGTCACCTGGCAGTGGTTCACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: TNVSAAHTSSHL*PMMSPGSGSQK Trigger: CTTCTGTGAACCACTGCCAGGTGACATCATCGGCAACAGGTGGGAAGAGGTGTGCGCTGCTGAGACATTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| CDS CCA 72 bp | AAACCGGGCTTTGGGGGACACAATGGATGTTCCACATaGGTAGCATTGGAGCTGATGGTGCCATCCTCATAC | + |
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Preference number: 6 (lower is better) Translates to: KPGFGGHNGCST*VALELMVPSSY Trigger: GTATGAGGATGGCACCATCAGCTCCAATGCTACCCATGTGGAACATCCATTGTGTCCCCCAAAGCCCGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075418.15 ENSMUST00000117410.2 |
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| CDS GCA 72 bp | TCCCAGGCTGTTTCAAGCCAAAAGCCGTGTGAAGATTaGTTCACAAATGTCTCAGCAGCGCACACCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SQAVSSQKPCED*FTNVSAAHTSS Trigger: GGAAGAGGTGTGCGCTGCTGAGACATTTGTGAAGCAATCTTCACACGGCTTTTGGCTTGAAACAGCCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| CDS TCA 72 bp | GAGTTCTTCCCAGGCTGTTTCAAGCCAAAAGCCGTGTaGAGATTGCTTCACAAATGTCTCAGCAGCGCACAC | + |
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Preference number: 6 (lower is better) Translates to: EFFPGCFKPKAV*RLLHKCLSSAH Trigger: GTGTGCGCTGCTGAGACATTTGTGAAGCAATCTTCACACGGCTTTTGGCTTGAAACAGCCTGGGAAGAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117410.2 |
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| CDS CCA 72 bp | AAATCCTCTCACAAAACCGGGCTTTGGGGGACACAATaGATGTTCCACATGGGTAGCATTGGAGCTGATGGT | + |
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Preference number: 6 (lower is better) Translates to: KSSHKTGLWGTQ*MFHMGSIGADG Trigger: ACCATCAGCTCCAATGCTACCCATGTGGAACATCCATTGTGTCCCCCAAAGCCCGGTTTTGTGAGAGGATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075418.15 ENSMUST00000117410.2 |
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| CDS TCA 72 bp | AGGGCGTGGAGGTTCTGCTCACACACAGCATATCCGTaGTGCTCTGGACAATTTCAAAGCTGCTCACATTAT | + |
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Preference number: 6 (lower is better) Translates to: RAWRFCSHTAYP*CSGQFQSCSHY Trigger: ATAATGTGAGCAGCTTTGAAATTGTCCAGAGCATCACGGATATGCTGTGTGTGAGCAGAACCTCCACGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075418.15 ENSMUST00000117410.2 |
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| CDS CCA 72 bp | GCATGGATGGTTAAATCCTCTCACAAAACCGGGCTTTaGGGGACACAATGGATGTTCCACATGGGTAGCATT | + |
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Preference number: 6 (lower is better) Translates to: AWMVKSSHKTGL*GTQWMFHMGSI Trigger: AATGCTACCCATGTGGAACATCCATTGTGTCCCCCAAAGCCCGGTTTTGTGAGAGGATTTAACCATCCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075418.15 ENSMUST00000117410.2 |
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