Pregenerated sensors for STARD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024378Ensembl transcript IDs: ENSMUST00000025236.9, ENSMUST00000118990.2, ENSMUST00000119991.8
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGGCCGCAGCAGGCAGGAACATGGCTTCTCTAGGTCATGGAGCTaGCAGGGTAGGAGCAGAGTCCGCAAACCACGGCAACAGGAGTTG | + |
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Preference number: 1 (lower is better) Translates to: TGRSRQEHGFSRSWS*QGRSRVRKPRQQEL Trigger: CAACTCCTGTTGCCGTGGTTTGCGGACTCTGCTCCTACCCTGTCAGCTCCATGACCTAGAGAAGCCATGTTCCTGCCTGCTGCGGCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025236.9 ENSMUST00000119991.8 |
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| 3UTR GCA 90 bp | CCTGCCTGCCTGCCATTATTGCCAGAGCTCACGTTACTCCAGATCTaGCAACACGGAAACACAAACCCACCCACCTTCCCACCAACCAAC | + |
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Preference number: 1 (lower is better) Translates to: PACLPLLPELTLLQI*QHGNTNPPTFPPTN Trigger: GTTGGTTGGTGGGAAGGTGGGTGGGTTTGTGTTTCCGTGTTGGCAGATCTGGAGTAACGTGAGCTCTGGCAATAATGGCAGGCAGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR TCA 90 bp | TTCATGCAGCTGACCCACCACAGACTTGTGAAGAAGGCCTCTGTGTaGCCTGCCTGCCTGCCATTATTGCCAGAGCTCACGTTACTCCAG | + |
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Preference number: 1 (lower is better) Translates to: FMQLTHHRLVKKASV*PACLPLLPELTLLQ Trigger: CTGGAGTAACGTGAGCTCTGGCAATAATGGCAGGCAGGCAGGTCACACAGAGGCCTTCTTCACAAGTCTGTGGTGGGTCAGCTGCATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR TCA 90 bp | GTGAGGAGCAGAAACAGCAACCCACACGGAAATGGCATGCACCACTaGGCGCTGCGTGTTCACACAAACACAAAATGTGTGTGGACACGG | + |
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Preference number: 1 (lower is better) Translates to: VRSRNSNPHGNGMHH*ALRVHTNTKCVWTR Trigger: CCGTGTCCACACACATTTTGTGTTTGTGTGAACACGCAGCGCTCAGTGGTGCATGCCATTTCCGTGTGGGTTGCTGTTTCTGCTCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR GCA 90 bp | GCAGAAACAGCAACCCACACGGAAATGGCATGCACCACTGAGCGCTaGGTGTTCACACAAACACAAAATGTGTGTGGACACGGAGTCACC | + |
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Preference number: 1 (lower is better) Translates to: AETATHTEMACTTER*VFTQTQNVCGHGVT Trigger: GGTGACTCCGTGTCCACACACATTTTGTGTTTGTGTGAACACGCAGCGCTCAGTGGTGCATGCCATTTCCGTGTGGGTTGCTGTTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR CCA 90 bp | ACCATCACCTCCCAGCCTCTGCTGGGATACTCTGAGTTACACGTATaGCTTGTAGGGTTTTCCTGCAATAGGTCTGCTCCAGAAGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: TITSQPLLGYSELHV*LVGFSCNRSAPEAA Trigger: GGCTGCTTCTGGAGCAGACCTATTGCAGGAAAACCCTACAAGCCATACGTGTAACTCAGAGTATCCCAGCAGAGGCTGGGAGGTGATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR GCA 90 bp | CCTTGCGTAGACCTTTTCGCAAATCACTGTAGAAGTTGGCTAACGTaGTCGCCATTGCTGTATCTACGGCAGACTGAGGGATCATGCCAC | + |
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Preference number: 1 (lower is better) Translates to: PCVDLFANHCRSWLT*SPLLYLRQTEGSCH Trigger: GTGGCATGATCCCTCAGTCTGCCGTAGATACAGCAATGGCGAGCACGTTAGCCAACTTCTACAGTGATTTGCGAAAAGGTCTACGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119991.8 |
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| 3UTR CCA 90 bp | GCCACGCAGGTCTGTCTGAATATAGCCTGTAAGAAGACTCTGGCTTaGACTGTCTTTGAGTGGAACACAGAACCAGCCACAGGGATGGTT | + |
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Preference number: 1 (lower is better) Translates to: ATQVCLNIACKKTLA*TVFEWNTEPATGMV Trigger: AACCATCCCTGTGGCTGGTTCTGTGTTCCACTCAAAGACAGTCCAAGCCAGAGTCTTCTTACAGGCTATATTCAGACAGACCTGCGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
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| 3UTR CCA 90 bp | GTCAGACAGGAACTTAGCAATGAACAAACTGAGAACACAACCCTCTaGGGGGAACTGCGTCTGGCAGGTCCTGGAAGTGATATTTCAAGC | + |
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Preference number: 1 (lower is better) Translates to: VRQELSNEQTENTTL*GELRLAGPGSDISS Trigger: GCTTGAAATATCACTTCCAGGACCTGCCAGACGCAGTTCCCCCCAGAGGGTTGTGTTCTCAGTTTGTTCATTGCTAAGTTCCTGTCTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR TCA 90 bp | ACTGCCATCCACAGCAAAGGGGATTTCTCAGACCTAATAGAGAGATaGGTGACAAAGACTGGGGTGTTGTCTCTGCTTCTCCAGAACCTC | + |
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Preference number: 1 (lower is better) Translates to: TAIHSKGDFSDLIER*VTKTGVLSLLLQNL Trigger: GAGGTTCTGGAGAAGCAGAGACAACACCCCAGTCTTTGTCACTCATCTCTCTATTAGGTCTGAGAAATCCCCTTTGCTGTGGATGGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR CCA 90 bp | CATGTTATGCCTTGCGTAGACCTTTTCGCAAATCACTGTAGAAGTTaGCTAACGTGCTCGCCATTGCTGTATCTACGGCAGACTGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: HVMPCVDLFANHCRS*LTCSPLLYLRQTEG Trigger: TCCCTCAGTCTGCCGTAGATACAGCAATGGCGAGCACGTTAGCCAACTTCTACAGTGATTTGCGAAAAGGTCTACGCAAGGCATAACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119991.8 |
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| 3UTR CCA 90 bp | CTGAATATAGCCTGTAAGAAGACTCTGGCTTGGACTGTCTTTGAGTaGAACACAGAACCAGCCACAGGGATGGTTATAGCCACGGACAAA | + |
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Preference number: 1 (lower is better) Translates to: LNIACKKTLAWTVFE*NTEPATGMVIATDK Trigger: TTTGTCCGTGGCTATAACCATCCCTGTGGCTGGTTCTGTGTTCCACTCAAAGACAGTCCAAGCCAGAGTCTTCTTACAGGCTATATTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
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| 3UTR TCA 90 bp | ACTTCATCTTACAGCAAGGCAAATGAAAGCTACTGTAGGCTTGTGTaGGTCATGATAACAGCTGCAGGCCTCCTGTGGACAATGAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: TSSYSKANESYCRLV*VMITAAGLLWTMSA Trigger: AGCACTCATTGTCCACAGGAGGCCTGCAGCTGTTATCATGACTCACACAAGCCTACAGTAGCTTTCATTTGCCTTGCTGTAAGATGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR CCA 90 bp | ACCAGGCCTCGGTATCACAGGAAAAGAAGGAAGGATGGAAGGGCCTaGACAAGTGTTCATGTAACTTTTAAAGGAGTCCTCATTAAATCC | + |
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Preference number: 1 (lower is better) Translates to: TRPRYHRKRRKDGRA*TSVHVTFKGVLIKS Trigger: GGATTTAATGAGGACTCCTTTAAAAGTTACATGAACACTTGTCCAGGCCCTTCCATCCTTCCTTCTTTTCCTGTGATACCGAGGCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR TCA 90 bp | CAGCCTTCACCGGACACTCTCAAGTCCATTTTCTTTCCCTATTGCTaGAGAGAAGAGCAGAGAGGAAATCTAGCCTTTCAGAAGTTACAA | + |
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Preference number: 1 (lower is better) Translates to: QPSPDTLKSIFFPYC*REEQRGNLAFQKLQ Trigger: TTGTAACTTCTGAAAGGCTAGATTTCCTCTCTGCTCTTCTCTTCAGCAATAGGGAAAGAAAATGGACTTGAGAGTGTCCGGTGAAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR TCA 90 bp | TCAGCAAGCTGTAAGCTACAGGAAATGTTCATCTGCACGGCAATGTaGGTGGTTATTCTGTTTCTCCTTCACGGTCCTATCAAAAGTTAC | + |
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Preference number: 1 (lower is better) Translates to: SASCKLQEMFICTAM*VVILFLLHGPIKSY Trigger: GTAACTTTTGATAGGACCGTGAAGGAGAAACAGAATAACCACTCACATTGCCGTGCAGATGAACATTTCCTGTAGCTTACAGCTTGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR TCA 90 bp | TCTACATTAATGAACATAGGTTTCAGACAGCTCACATGTCACTTCTaGACCTACTGTGAAACTCACAATGGCAATGAAAACATTTCCACG | + |
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Preference number: 1 (lower is better) Translates to: STLMNIGFRQLTCHF*TYCETHNGNENIST Trigger: CGTGGAAATGTTTTCATTGCCATTGTGAGTTTCACAGTAGGTTCAGAAGTGACATGTGAGCTGTCTGAAACCTATGTTCATTAATGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR TCA 90 bp | TTATTTATGCACATTTCTAAAGCAGACACCGTGTGCAGCAAGCACTaGAAGTGCTCAGCTATAAAAGATTCTGGTGAAGAGAACAATTCA | + |
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Preference number: 1 (lower is better) Translates to: LFMHISKADTVCSKH*KCSAIKDSGEENNS Trigger: TGAATTGTTCTCTTCACCAGAATCTTTTATAGCTGAGCACTTTCAGTGCTTGCTGCACACGGTGTCTGCTTTAGAAATGTGCATAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR-3UTR GCA 90 bp | AGCATGCACCAGGCCTCGGTATCACAGGAAAAGAAGGAAGGATGGAAGGGCCTGCTTGCAGTGCGTCCCTaGTCAGCAGTGAATGACCTC | + |
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Preference number: 2 (lower is better) Translates to: SMHQASVSQEKKEGWKGLLAVRP*SAVNDL Trigger: GAGGTCATTCACTGCTGAGCAGGGACGCACTGCAAG...CAGGCCCTTCCATCCTTCCTTCTTTTCCTGTGATACCGAGGCCTGGTGCATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR CAA 90 bp | GACCTTTTCGCAAATCACTGTAGAAGTTGGCTAACGTGCTCGCCATaGCTGTATCTACGGCAGACTGAGGGATCATGCCACGCAGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: DLFANHCRSWLTCSP*LYLRQTEGSCHAGL Trigger: CAGACCTGCGTGGCATGATCCCTCAGTCTGCCGTAGATACAGCAATGGCGAGCACGTTAGCCAACTTCTACAGTGATTTGCGAAAAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
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| 3UTR-3UTR CCA 90 bp | CGCCATTGCTGTATCTACGGCAGACTGAGGGATCATGCCACGCAGGTCTGTCTGAAGAAGACTCTGGCTTaGACTGTCTTTGAGTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: RHCCIYGRLRDHATQVCLKKTLA*TVFEWN Trigger: GTTCCACTCAAAGACAGTCCAAGCCAGAGTCTTCTT...CAGACAGACCTGCGTGGCATGATCCCTCAGTCTGCCGTAGATACAGCAATGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
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| 3UTR-3UTR CCA 90 bp | AGCATGCACCAGGCCTCGGTATCACAGGAAAAGAAGGAAGGATGGAAGGGCCTGAACACAAAATGTGTGTaGACACGGAGTCACCTCACA | + |
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Preference number: 2 (lower is better) Translates to: SMHQASVSQEKKEGWKGLNTKCV*TRSHLT Trigger: TGTGAGGTGACTCCGTGTCCACACACATTTTGTGTT...CAGGCCCTTCCATCCTTCCTTCTTTTCCTGTGATACCGAGGCCTGGTGCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR-3UTR GCA 90 bp | AGCATGCACCAGGCCTCGGTATCACAGGAAAAGAAGGAAGGATGGAAGGGCCTGATCCAGATTTCCATCTaGTTCTCTGGTTCTGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: SMHQASVSQEKKEGWKGLIQISI*FSGSVS Trigger: GCTAACAGAACCAGAGAAGCAGATGGAAATCTGGAT...CAGGCCCTTCCATCCTTCCTTCTTTTCCTGTGATACCGAGGCCTGGTGCATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR-3UTR TCA 90 bp | GCACGTATTTCCAGAGTACACACATTTCCTCAGCAAGCTGTAAGCTACAGGAAAGCCTCCTGTGGACAATaGGTGCTTGCCATATGGCGA | + |
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Preference number: 2 (lower is better) Translates to: ARISRVHTFPQQAVSYRKASCGQ*VLAIWR Trigger: TCGCCATATGGCAAGCACTCATTGTCCACAGGAGGC...TTTCCTGTAGCTTACAGCTTGCTGAGGAAATGTGTGTACTCTGGAAATACGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR-3UTR CCA 90 bp | GCACGTATTTCCAGAGTACACACATTTCCTCAGCAAGCTGTAAGCTACAGGAAACAACCCACACGGAAATaGCATGCACCACTGAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: ARISRVHTFPQQAVSYRKQPTRK*HAPLSA Trigger: AGCGCTCAGTGGTGCATGCCATTTCCGTGTGGGTTG...TTTCCTGTAGCTTACAGCTTGCTGAGGAAATGTGTGTACTCTGGAAATACGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGATCATGCCACGCAGGTCTGTCTGAATATAGCCTGTAAGAAGACTCTGGCTTGGACTGTCTTTGAGTaGAACACAGAACCAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: RDHATQVCLNIACKKTLAWTVFE*NTEPAT Trigger: TGTGGCTGGTTCTGTGTTCCACTCAAAGACAGTCCA...AGCCAGAGTCTTCTTACAGGCTATATTCAGACAGACCTGCGTGGCATGATCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCCAGTTTCAAATACACCCATTGTGTTCATGGAACAAGAAAGAAATCCTGGTAAGAAGGCCTCTGTGTaGCCTGCCTGCCTGCCATTA | + |
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Preference number: 2 (lower is better) Translates to: PPVSNTPIVFMEQERNPGKKASV*PACLPL Trigger: TAATGGCAGGCAGGCAGGTCACACAGAGGCCTTCTT...ACCAGGATTTCTTTCTTGTTCCATGAACACAATGGGTGTATTTGAAACTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGACAGCTCACATGTCACTTCTGAACCTACTGTGAAACTCACAATGGCAATGTGCACCACTGAGCGCTaGGTGTTCACACAAACACAA | + |
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Preference number: 2 (lower is better) Translates to: SDSSHVTSEPTVKLTMAMCTTER*VFTQTQ Trigger: TTGTGTTTGTGTGAACACGCAGCGCTCAGTGGTGCA...CATTGCCATTGTGAGTTTCACAGTAGGTTCAGAAGTGACATGTGAGCTGTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR-3UTR GCA 90 bp | CCCCCAGTTTCAAATACACCCATTGTGTTCATGGAACAAGAAAGAAATCCTGGTGAGGGTTGTTTTACTTaGAGTGCGTCCCTGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PPVSNTPIVFMEQERNPGEGCFT*SASLLS Trigger: GCTGAGCAGGGACGCACTGCAAGTAAAACAACCCTC...ACCAGGATTTCTTTCTTGTTCCATGAACACAATGGGTGTATTTGAAACTGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR CAA 90 bp | TGCTTAGGTGACAATACACAGTGTACACAGAAACAAAGGATCTTTTaGGGTGACAAAAACGGTCTAAACTGTGCTGTGGTGAGGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: CLGDNTQCTQKQRIF*GDKNGLNCAVVRAA Trigger: TGCAGCCCTCACCACAGCACAGTTTAGACCGTTTTTGTCACCCAAAAAGATCCTTTGTTTCTGTGTACACTGTGTATTGTCACCTAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR CCA 72 bp | GGCCAGAGGGCACAAGATCCTTCAGAACTGGAGCTATaGACTGCTATAAGCCCTTCCCCCAGCCCCAGGTAC | + |
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Preference number: 3 (lower is better) Translates to: GQRAQDPSELEL*TAISPSPSPRY Trigger: GTACCTGGGGCTGGGGGAAGGGCTTATAGCAGTCCATAGCTCCAGTTCTGAAGGATCTTGTGCCCTCTGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR TCA 72 bp | AGCAGGCAGGAACATGGCTTCTCTAGGTCATGGAGCTaGCAGGGTAGGAGCAGAGTCCGCAAACCACGGCAA | + |
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Preference number: 3 (lower is better) Translates to: SRQEHGFSRSWS*QGRSRVRKPRQ Trigger: TTGCCGTGGTTTGCGGACTCTGCTCCTACCCTGTCAGCTCCATGACCTAGAGAAGCCATGTTCCTGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025236.9 ENSMUST00000119991.8 |
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| 3UTR TCA 72 bp | CTGACCCACCACAGACTTGTGAAGAAGGCCTCTGTGTaGCCTGCCTGCCTGCCATTATTGCCAGAGCTCACG | + |
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Preference number: 3 (lower is better) Translates to: LTHHRLVKKASV*PACLPLLPELT Trigger: CGTGAGCTCTGGCAATAATGGCAGGCAGGCAGGTCACACAGAGGCCTTCTTCACAAGTCTGTGGTGGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR TCA 72 bp | GCAGAGAGCCCGTTCGGAGCAGGCCAGGGAGAGCCTTaGCAGCATCCAATGTTGGTACCAAGTCTTTACCCA | + |
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Preference number: 3 (lower is better) Translates to: AESPFGAGQGEP*QHPMLVPSLYP Trigger: TGGGTAAAGACTTGGTACCAACATTGGATGCTGTCAAGGCTCTCCCTGGCCTGCTCCGAACGGGCTCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR CCA 72 bp | ACCTCATCAGTCACTGGAGGTCTAGCCAAGAGACACTaGGCAAGTGTGAGATCCGCAGAGAGCCCGTTCGGA | + |
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Preference number: 3 (lower is better) Translates to: TSSVTGGLAKRH*ASVRSAESPFG Trigger: TCCGAACGGGCTCTCTGCGGATCTCACACTTGCCCAGTGTCTCTTGGCTAGACCTCCAGTGACTGATGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR GCA 72 bp | AGAAGGCCTCTGTGTGACCTGCCTGCCTGCCATTATTaGCAGAGCTCACGTTACTCCAGATCTGCCAACACG | + |
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Preference number: 3 (lower is better) Translates to: RRPLCDLPACHY*QSSRYSRSANT Trigger: CGTGTTGGCAGATCTGGAGTAACGTGAGCTCTGGCAATAATGGCAGGCAGGCAGGTCACACAGAGGCCTTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR-3UTR CAA 90 bp | ATTGTACTATGGCCCCAACAACACCTCCAGTGTTTCCACAGGCCGCAGCAGGCACTAACGTGCTCGCCATaGCTGTATCTACGGCAGACT | + |
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Preference number: 3 (lower is better) Translates to: IVLWPQQHLQCFHRPQQALTCSP*LYLRQT Trigger: AGTCTGCCGTAGATACAGCAATGGCGAGCACGTTAG...TGCCTGCTGCGGCCTGTGGAAACACTGGAGGTGTTGTTGGGGCCATAGTACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119991.8 |
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| 3UTR GCA 72 bp | CCACCACAGACTTGTGAAGAAGGCCTCTGTGTGACCTaGCTGCCTGCCATTATTGCCAGAGCTCACGTTACT | + |
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Preference number: 3 (lower is better) Translates to: PPQTCEEGLCVT*LPAIIARAHVT Trigger: AGTAACGTGAGCTCTGGCAATAATGGCAGGCAGGCAGGTCACACAGAGGCCTTCTTCACAAGTCTGTGGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR GCA 72 bp | ATAACAGCTGCAGGCCTCCTGTGGACAATGAGTGCTTaGCATATGGCGAGTCCCAGCACAGAATACCCACCT | + |
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Preference number: 3 (lower is better) Translates to: ITAAGLLWTMSA*HMASPSTEYPP Trigger: AGGTGGGTATTCTGTGCTGGGACTCGCCATATGGCAAGCACTCATTGTCCACAGGAGGCCTGCAGCTGTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR GCA 72 bp | CTGCCATTATTGCCAGAGCTCACGTTACTCCAGATCTaGCAACACGGAAACACAAACCCACCCACCTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: LPLLPELTLLQI*QHGNTNPPTFP Trigger: TGGGAAGGTGGGTGGGTTTGTGTTTCCGTGTTGGCAGATCTGGAGTAACGTGAGCTCTGGCAATAATGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR GCA 72 bp | GGATGTGTGTATAAGCACTGTGCACATGCCTGCATCTaGAGAGGCCAGAGGGCACAAGATCCTTCAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: GCVYKHCAHACI*RGQRAQDPSEL Trigger: CAGTTCTGAAGGATCTTGTGCCCTCTGGCCTCTGCAGATGCAGGCATGTGCACAGTGCTTATACACACATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR CCA 72 bp | GAGCAGGCCAGGGAGAGCCTTGACAGCATCCAATGTTaGTACCAAGTCTTTACCCAGGCTCCTGTCACTTTA | + |
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Preference number: 3 (lower is better) Translates to: EQARESLDSIQC*YQVFTQAPVTL Trigger: TAAAGTGACAGGAGCCTGGGTAAAGACTTGGTACCAACATTGGATGCTGTCAAGGCTCTCCCTGGCCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR-3UTR CAA 90 bp | TGCAGAGGCCAGAGGGCACAAGATCCTTCAGAACTGGAGCTATGGACTGCTATACCAGAGCATACCTGGTaGTTTTCAGTCACTCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: CRGQRAQDPSELELWTAIPEHTW*FSVTPR Trigger: TCTGGGAGTGACTGAAAACAACCAGGTATGCTCTGG...TATAGCAGTCCATAGCTCCAGTTCTGAAGGATCTTGTGCCCTCTGGCCTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR TCA 72 bp | CACTACCATCACCTCCCAGCCTCTGCTGGGATACTCTaGGTTACACGTATGGCTTGTAGGGTTTTCCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: HYHHLPASAGIL*VTRMACRVFLQ Trigger: TTGCAGGAAAACCCTACAAGCCATACGTGTAACTCAGAGTATCCCAGCAGAGGCTGGGAGGTGATGGTAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR GCA 72 bp | ATTTCCACGAGGGTTGTTTTACTTGCAGTGCGTCCCTaGTCAGCAGTGAATGACCTCATCAGTCACTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: ISTRVVLLAVRP*SAVNDLISHWR Trigger: CCTCCAGTGACTGATGAGGTCATTCACTGCTGAGCAGGGACGCACTGCAAGTAAAACAACCCTCGTGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR CCA 72 bp | GAACTTAGCAATGAACAAACTGAGAACACAACCCTCTaGGGGGAACTGCGTCTGGCAGGTCCTGGAAGTGAT | + |
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Preference number: 3 (lower is better) Translates to: ELSNEQTENTTL*GELRLAGPGSD Trigger: ATCACTTCCAGGACCTGCCAGACGCAGTTCCCCCCAGAGGGTTGTGTTCTCAGTTTGTTCATTGCTAAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR CCA 72 bp | TCCCAGCCTCTGCTGGGATACTCTGAGTTACACGTATaGCTTGTAGGGTTTTCCTGCAATAGGTCTGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SQPLLGYSELHV*LVGFSCNRSAP Trigger: TGGAGCAGACCTATTGCAGGAAAACCCTACAAGCCATACGTGTAACTCAGAGTATCCCAGCAGAGGCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| 3UTR TCA 72 bp | AGAAACAGCAACCCACACGGAAATGGCATGCACCACTaGGCGCTGCGTGTTCACACAAACACAAAATGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RNSNPHGNGMHH*ALRVHTNTKCV Trigger: CACACATTTTGTGTTTGTGTGAACACGCAGCGCTCAGTGGTGCATGCCATTTCCGTGTGGGTTGCTGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR GCA 72 bp | GACCTTTTCGCAAATCACTGTAGAAGTTGGCTAACGTaGTCGCCATTGCTGTATCTACGGCAGACTGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: DLFANHCRSWLT*SPLLYLRQTEG Trigger: TCCCTCAGTCTGCCGTAGATACAGCAATGGCGAGCACGTTAGCCAACTTCTACAGTGATTTGCGAAAAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
||
| 3UTR CCA 72 bp | CCTTGCGTAGACCTTTTCGCAAATCACTGTAGAAGTTaGCTAACGTGCTCGCCATTGCTGTATCTACGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PCVDLFANHCRS*LTCSPLLYLRQ Trigger: CTGCCGTAGATACAGCAATGGCGAGCACGTTAGCCAACTTCTACAGTGATTTGCGAAAAGGTCTACGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119991.8 |
||
| 3UTR TCA 72 bp | CACAGCAAAGGGGATTTCTCAGACCTAATAGAGAGATaGGTGACAAAGACTGGGGTGTTGTCTCTGCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HSKGDFSDLIER*VTKTGVLSLLL Trigger: GAGAAGCAGAGACAACACCCCAGTCTTTGTCACTCATCTCTCTATTAGGTCTGAGAAATCCCCTTTGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR CCA 72 bp | TTTCTCAGACCTAATAGAGAGATGAGTGACAAAGACTaGGGTGTTGTCTCTGCTTCTCCAGAACCTCGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: FLRPNREMSDKD*GVVSASPEPRV Trigger: TACCCGAGGTTCTGGAGAAGCAGAGACAACACCCCAGTCTTTGTCACTCATCTCTCTATTAGGTCTGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR CCA 72 bp | GTCTGTCTGAATATAGCCTGTAAGAAGACTCTGGCTTaGACTGTCTTTGAGTGGAACACAGAACCAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: VCLNIACKKTLA*TVFEWNTEPAT Trigger: TGTGGCTGGTTCTGTGTTCCACTCAAAGACAGTCCAAGCCAGAGTCTTCTTACAGGCTATATTCAGACAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
||
| 3UTR GCA 72 bp | TCATCCTCTCCCTATCCTGGCAACTTGGGTAACTGCTaGTTAGGTGACAATACACAGTGTACACAGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: SSSPYPGNLGNC*LGDNTQCTQKQ Trigger: TTGTTTCTGTGTACACTGTGTATTGTCACCTAAGCAGCAGTTACCCAAGTTGCCAGGATAGGGAGAGGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR CCA 72 bp | CAGCTACTGCTCAATGCGATGTCACCAGAGCATACCTaGTTGTTTTCAGTCACTCCCAGAATAAATGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: QLLLNAMSPEHT*LFSVTPRINAH Trigger: ATGTGCATTTATTCTGGGAGTGACTGAAAACAACCAGGTATGCTCTGGTGACATCGCATTGAGCAGTAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR CCA 72 bp | CGGTATCACAGGAAAAGAAGGAAGGATGGAAGGGCCTaGACAAGTGTTCATGTAACTTTTAAAGGAGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RYHRKRRKDGRA*TSVHVTFKGVL Trigger: GAGGACTCCTTTAAAAGTTACATGAACACTTGTCCAGGCCCTTCCATCCTTCCTTCTTTTCCTGTGATACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR TCA 72 bp | TACACAGTGTACACAGAAACAAAGGATCTTTTTGGGTaGCAAAAACGGTCTAAACTGTGCTGTGGTGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: YTVYTETKDLFG*QKRSKLCCGEG Trigger: GCCCTCACCACAGCACAGTTTAGACCGTTTTTGTCACCCAAAAAGATCCTTTGTTTCTGTGTACACTGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR TCA 72 bp | CACATTTCTAAAGCAGACACCGTGTGCAGCAAGCACTaGAAGTGCTCAGCTATAAAAGATTCTGGTGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HISKADTVCSKH*KCSAIKDSGEE Trigger: CTCTTCACCAGAATCTTTTATAGCTGAGCACTTTCAGTGCTTGCTGCACACGGTGTCTGCTTTAGAAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR TCA 72 bp | GAAGAACGTTGCCCACATATCAAAATTAAACTCTATTaGACTGTGCCATTCTTGCCCCCTGTGGTCTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: EERCPHIKIKLY*TVPFLPPVVFL Trigger: TAGGAAGACCACAGGGGGCAAGAATGGCACAGTTCAATAGAGTTTAATTTTGATATGTGGGCAACGTTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR CCA 72 bp | AGCTACAGGAAATGTTCATCTGCACGGCAATGTGAGTaGTTATTCTGTTTCTCCTTCACGGTCCTATCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SYRKCSSARQCE*LFCFSFTVLSK Trigger: TTTTGATAGGACCGTGAAGGAGAAACAGAATAACCACTCACATTGCCGTGCAGATGAACATTTCCTGTAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR TCA 72 bp | GATTTGGGATGTCATAGCCATGAAGTAATGTTCACATaGGACAGCTTCATTCATAGTTCACCCTGGTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: DLGCHSHEVMFT*DSFIHSSPWSY Trigger: GTATGACCAGGGTGAACTATGAATGAAGCTGTCTCATGTGAACATTACTTCATGGCTATGACATCCCAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR TCA 72 bp | CAAGCACTGAAAGTGCTCAGCTATAAAAGATTCTGGTaGAGAGAACAATTCAGGAATTGTCCACTTCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: QALKVLSYKRFW*REQFRNCPLHL Trigger: AAGATGAAGTGGACAATTCCTGAATTGTTCTCTTCACCAGAATCTTTTATAGCTGAGCACTTTCAGTGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAAGTTACAATAAAGTCAGACAGGAACTTAGCAATGAACAAACTGAGAACAAAGTCAGAGAAGGATTaGGGATGTCATAGCCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: SEVTIKSDRNLAMNKLRTKSEKD*GCHSHE Trigger: TTCATGGCTATGACATCCCAAATCCTTCTCTGACTT...TGTTCTCAGTTTGTTCATTGCTAAGTTCCTGTCTGACTTTATTGTAACTTCTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCCAACAACACCTCCAGTGTTTCCACAGGCCGCAGCAGGCAGGAACATGGCGTATCTACGGCAGACTaGGGGATCATGCCACGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPNNTSSVSTGRSRQEHGVSTAD*GIMPRR Trigger: CCTGCGTGGCATGATCCCTCAGTCTGCCGTAGATAC...GCCATGTTCCTGCCTGCTGCGGCCTGTGGAAACACTGGAGGTGTTGTTGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR CAA 72 bp | CGCAGAGAGCCCGTTCGGAGCAGGCCAGGGAGAGCCTaGACAGCATCCAATGTTGGTACCAAGTCTTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: RREPVRSRPGRA*TASNVGTKSLP Trigger: GGGTAAAGACTTGGTACCAACATTGGATGCTGTCAAGGCTCTCCCTGGCCTGCTCCGAACGGGCTCTCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTACTATGGCCCCAACAACACCTCCAGTGTTTCCACAGGCCGCAGCAGGCACAAGCGCCAGGGCCCTaGGCGGATATGGTCTATTAC | + |
|
Preference number: 4 (lower is better) Translates to: IVLWPQQHLQCFHRPQQAQAPGP*ADMVYY Trigger: GTAATAGACCATATCCGCCCAGGGCCCTGGCGCTTG...TGCCTGCTGCGGCCTGTGGAAACACTGGAGGTGTTGTTGGGGCCATAGTACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025236.9 ENSMUST00000119991.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGACTCTGGCTTGGACTGTCTTTGAGTGGAACACAGAACCAGCCACAGGGACTTCCTGCCAATCTGTaGCCACGGGCTCTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLWLGLSLSGTQNQPQGLPANL*PRALRV Trigger: GACCCTGAGAGCCCGTGGTCACAGATTGGCAGGAAG...TCCCTGTGGCTGGTTCTGTGTTCCACTCAAAGACAGTCCAAGCCAGAGTCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
||
| 3UTR CAA 72 bp | GATAACAGCTGCAGGCCTCCTGTGGACAATGAGTGCTaGCCATATGGCGAGTCCCAGCACAGAATACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DNSCRPPVDNEC*PYGESQHRIPT Trigger: GGTGGGTATTCTGTGCTGGGACTCGCCATATGGCAAGCACTCATTGTCCACAGGAGGCCTGCAGCTGTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGGGATCATGCCACGCAGGTCTGTCTGAATATAGCCTGTAAGAAGACTCTGCTTCCTGCCAATCTGTaGCCACGGGCTCTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRDHATQVCLNIACKKTLLPANL*PRALRV Trigger: GACCCTGAGAGCCCGTGGTCACAGATTGGCAGGAAG...CAGAGTCTTCTTACAGGCTATATTCAGACAGACCTGCGTGGCATGATCCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCCCCAACAACACCTCCAGTGTTTCCACAGGCCGCAGCAGGCAGGAACATGACAGTCCTTCCAGTTTaGTCTTCCTGCCAATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MAPTTPPVFPQAAAGRNMTVLPV*SSCQSV Trigger: CACAGATTGGCAGGAAGATCAAACTGGAAGGACTGT...CATGTTCCTGCCTGCTGCGGCCTGTGGAAACACTGGAGGTGTTGTTGGGGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025236.9 ENSMUST00000119991.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCCCCAACAACACCTCCAGTGTTTCCACAGGCCGCAGCAGGCAGGAACATGCTCATCAGAATGGGATaGCTACAGTGTTCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MAPTTPPVFPQAAAGRNMLIRMG*LQCSGR Trigger: CCTTCCAGAACACTGTAGGCATCCCATTCTGATGAG...CATGTTCCTGCCTGCTGCGGCCTGTGGAAACACTGGAGGTGTTGTTGGGGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119991.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGAAGACTCTGGCTTGGACTGTCTTTGAGTGGAACACAGAACCAGCCACAGCAAGCGCCAGGGCCCTaGGCGGATATGGTCTATTAC | + |
|
Preference number: 4 (lower is better) Translates to: VRRLWLGLSLSGTQNQPQQAPGP*ADMVYY Trigger: GTAATAGACCATATCCGCCCAGGGCCCTGGCGCTTG...CTGTGGCTGGTTCTGTGTTCCACTCAAAGACAGTCCAAGCCAGAGTCTTCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACACCTCCAGTGTTTCCACAGGCCGCAGCAGGCAGGAACATGGCTTCTCTGGACTGTCTTTGAGTaGAACACAGAACCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QQHLQCFHRPQQAGTWLLWTVFE*NTEPAT Trigger: TGTGGCTGGTTCTGTGTTCCACTCAAAGACAGTCCA...GAGAAGCCATGTTCCTGCCTGCTGCGGCCTGTGGAAACACTGGAGGTGTTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| CDS-3UTR CCA 90 bp | ATGGCCCCAACAACACCTCCAGTGTTTCCACAGGCCGCAGCAGGCAGGAACATGAAGAAGACTCTGGCTTaGACTGTCTTTGAGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MAPTTPPVFPQAAAGRNMKKTLA*TVFEWN Trigger: GTTCCACTCAAAGACAGTCCAAGCCAGAGTCTTCTT...CATGTTCCTGCCTGCTGCGGCCTGTGGAAACACTGGAGGTGTTGTTGGGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR CAA 72 bp | GACTGCTATAAGCCCTTCCCCCAGCCCCAGGTACTTTaGCAAGAGCAGAGAACGCTCTTTCACTACCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: DCYKPFPQPQVL*QEQRTLFHYHH Trigger: GTGATGGTAGTGAAAGAGCGTTCTCTGCTCTTGCAAAAGTACCTGGGGCTGGGGGAAGGGCTTATAGCAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCCAACAACACCTCCAGTGTTTCCACAGGCCGCAGCAGGCAGGAACATGGCGTTCTGAAGTTTAGTTaGAATAGAGGCAACATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPNNTSSVSTGRSRQEHGVLKFS*NRGNIR Trigger: TCTGATGTTGCCTCTATTTCAACTAAACTTCAGAAC...GCCATGTTCCTGCCTGCTGCGGCCTGTGGAAACACTGGAGGTGTTGTTGGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025236.9 ENSMUST00000119991.8 |
||
| CDS-3UTR TCA 90 bp | CAACAACACCTCCAGTGTTTCCACAGGCCGCAGCAGGCAGGAACATGGCTTCTCCCCATTAAACTCTTCTaGGGGTTTTCTCCAAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: QQHLQCFHRPQQAGTWLLPIKLF*GFSPNG Trigger: ACCGTTTGGAGAAAACCCTCAGAAGAGTTTAATGGG...GAGAAGCCATGTTCCTGCCTGCTGCGGCCTGTGGAAACACTGGAGGTGTTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025236.9 ENSMUST00000119991.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAACCAGCCACAGGGATGGTTATAGCCACGGACAAACTCTGGTCTCGTCTCCACACCTCTTCAAAGTaGTCCAGAACATCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TEPATGMVIATDKLWSRLHTSSK*SRTSRE Trigger: CTCCCTGGATGTTCTGGAGCACTTTGAAGAGGTGTG...GAGACGAGACCAGAGTTTGTCCGTGGCTATAACCATCCCTGTGGCTGGTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118990.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTACTATGGCCCCAACAACACCTCCAGTGTTTCCACAGGCCGCAGCAGGCAGGCCCTGGGCGGATATaGTCTATTACATTATTGACC | + |
|
Preference number: 4 (lower is better) Translates to: IVLWPQQHLQCFHRPQQAGPGRI*SITLLT Trigger: GGTCAATAATGTAATAGACCATATCCGCCCAGGGCC...TGCCTGCTGCGGCCTGTGGAAACACTGGAGGTGTTGTTGGGGCCATAGTACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025236.9 ENSMUST00000119991.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCATTCTTGCCCCCTGTGGTCTTCCTAATACTTACAATAGCACAAGTTAACCTTCCTGCCAATCTGTaGCCACGGGCTCTCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPFLPPVVFLILTIAQVNLPANL*PRALRV Trigger: GACCCTGAGAGCCCGTGGTCACAGATTGGCAGGAAG...GTTAACTTGTGCTATTGTAAGTATTAGGAAGACCACAGGGGGCAAGAATGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| CDS-3UTR TCA 90 bp | ATTGTACTATGGCCCCAACAACACCTCCAGTGTTTCCACAGGCCGCAGCAGGCATTCCCCAAATGTCTGTaGTACTCTTCAAAGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IVLWPQQHLQCFHRPQQAFPKCL*YSSKCS Trigger: GGAGCACTTTGAAGAGTATCACAGACATTTGGGGAA...TGCCTGCTGCGGCCTGTGGAAACACTGGAGGTGTTGTTGGGGCCATAGTACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119991.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGGCCAGAGGGCACAAGATCCTTCAGAACTGGAGCTATGGACTGCTATAAAAGCTGCCCAGCAGTaGTGTAACGCATCACACAAC | + |
|
Preference number: 4 (lower is better) Translates to: CRGQRAQDPSELELWTAIKAAQQ*CNASHN Trigger: GTTGTGTGATGCGTTACACCACTGCTGGGCAGCTTT...TATAGCAGTCCATAGCTCCAGTTCTGAAGGATCTTGTGCCCTCTGGCCTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR CAA 72 bp | GCAAATCACTGTAGAAGTTGGCTAACGTGCTCGCCATaGCTGTATCTACGGCAGACTGAGGGATCATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ANHCRSWLTCSP*LYLRQTEGSCH Trigger: GTGGCATGATCCCTCAGTCTGCCGTAGATACAGCAATGGCGAGCACGTTAGCCAACTTCTACAGTGATTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGACTCTGGCTTGGACTGTCTTTGAGTGGAACACAGAACCAGCCACAGGGAGGCCCTGGGCGGATATaGTCTATTACATTATTGACC | + |
|
Preference number: 4 (lower is better) Translates to: RRLWLGLSLSGTQNQPQGGPGRI*SITLLT Trigger: GGTCAATAATGTAATAGACCATATCCGCCCAGGGCC...TCCCTGTGGCTGGTTCTGTGTTCCACTCAAAGACAGTCCAAGCCAGAGTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
||
| 3UTR CAA 72 bp | GTGTCGCCCTTTTCATCCTCTCCCTATCCTGGCAACTaGGGTAACTGCTGCTTAGGTGACAATACACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSPFSSSPYPGN*GNCCLGDNTQC Trigger: ACACTGTGTATTGTCACCTAAGCAGCAGTTACCCAAGTTGCCAGGATAGGGAGAGGATGAAAAGGGCGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| CDS-3UTR TCA 90 bp | AGGGATCATGCCACGCAGGTCTGTCTGAATATAGCCTGTAAGAAGACTCTGGCTACAGTCCTTCCAGTTTaGTCTTCCTGCCAATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDHATQVCLNIACKKTLATVLPV*SSCQSV Trigger: CACAGATTGGCAGGAAGATCAAACTGGAAGGACTGT...AGCCAGAGTCTTCTTACAGGCTATATTCAGACAGACCTGCGTGGCATGATCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGGATCATGCCACGCAGGTCTGTCTGAATATAGCCTGTAAGAAGACTCTGCCCATTAAACTCTTCTaGGGGTTTTCTCCAAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRDHATQVCLNIACKKTLPIKLF*GFSPNG Trigger: ACCGTTTGGAGAAAACCCTCAGAAGAGTTTAATGGG...CAGAGTCTTCTTACAGGCTATATTCAGACAGACCTGCGTGGCATGATCCCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
||
| CDS-3UTR CCA 90 bp | AGGGATCATGCCACGCAGGTCTGTCTGAATATAGCCTGTAAGAAGACTCTGGCTCTTCTCTCATCAGAATaGGATGCCTACAGTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RDHATQVCLNIACKKTLALLSSE*DAYSVL Trigger: CAGAACACTGTAGGCATCCCATTCTGATGAGAGAAG...AGCCAGAGTCTTCTTACAGGCTATATTCAGACAGACCTGCGTGGCATGATCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119991.8 |
||
| CDS-3UTR TCA 90 bp | TGTAAGAAGACTCTGGCTTGGACTGTCTTTGAGTGGAACACAGAACCAGCCACACCCATTAAACTCTTCTaGGGGTTTTCTCCAAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: CKKTLAWTVFEWNTEPATPIKLF*GFSPNG Trigger: ACCGTTTGGAGAAAACCCTCAGAAGAGTTTAATGGG...TGTGGCTGGTTCTGTGTTCCACTCAAAGACAGTCCAAGCCAGAGTCTTCTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
||
| CDS-3UTR TCA 90 bp | AAGACTCTGGCTTGGACTGTCTTTGAGTGGAACACAGAACCAGCCACAGGGATGGTTCTGAAGTTTAGTTaGAATAGAGGCAACATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTLAWTVFEWNTEPATGMVLKFS*NRGNIR Trigger: TCTGATGTTGCCTCTATTTCAACTAAACTTCAGAAC...CATCCCTGTGGCTGGTTCTGTGTTCCACTCAAAGACAGTCCAAGCCAGAGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
||
| CDS-3UTR TCA 90 bp | TATCTACGGCAGACTGAGGGATCATGCCACGCAGGTCTGTCTGAATATAGCCTGGTTCTGAAGTTTAGTTaGAATAGAGGCAACATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLRQTEGSCHAGLSEYSLVLKFS*NRGNIR Trigger: TCTGATGTTGCCTCTATTTCAACTAAACTTCAGAAC...CAGGCTATATTCAGACAGACCTGCGTGGCATGATCCCTCAGTCTGCCGTAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118990.2 ENSMUST00000119991.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGTTTCAAATACACCCATTGTGTTCATGGAACAAGAAAGAAATCCTGGTGGCCCTGGGCGGATATaGTCTATTACATTATTGACC | + |
|
Preference number: 4 (lower is better) Translates to: PPVSNTPIVFMEQERNPGGPGRI*SITLLT Trigger: GGTCAATAATGTAATAGACCATATCCGCCCAGGGCC...ACCAGGATTTCTTTCTTGTTCCATGAACACAATGGGTGTATTTGAAACTGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| CDS-3UTR TCA 90 bp | TCAGAAGTTACAATAAAGTCAGACAGGAACTTAGCAATGAACAAACTGAGAACAGGCTTGGACTGTCTTTaGGTGGAACACAGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEVTIKSDRNLAMNKLRTGLDCL*VEHRTS Trigger: GCTGGTTCTGTGTTCCACTCAAAGACAGTCCAAGCC...TGTTCTCAGTTTGTTCATTGCTAAGTTCCTGTCTGACTTTATTGTAACTTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| 3UTR CAA 72 bp | GACAATACACAGTGTACACAGAAACAAAGGATCTTTTaGGGTGACAAAAACGGTCTAAACTGTGCTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DNTQCTQKQRIF*GDKNGLNCAVV Trigger: CACCACAGCACAGTTTAGACCGTTTTTGTCACCCAAAAAGATCCTTTGTTTCTGTGTACACTGTGTATTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
||
| CDS-3UTR CAA 90 bp | ATGGCCCCAACAACACCTCCAGTGTTTCCACAGGCCGCAGCAGGCAGGAACATGCTAACGTGCTCGCCATaGCTGTATCTACGGCAGACT | + |
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Preference number: 5 (lower is better) Translates to: MAPTTPPVFPQAAAGRNMLTCSP*LYLRQT Trigger: AGTCTGCCGTAGATACAGCAATGGCGAGCACGTTAG...CATGTTCCTGCCTGCTGCGGCCTGTGGAAACACTGGAGGTGTTGTTGGGGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025236.9 |
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| CDS CCA 90 bp | CCATGTCTCGTGAGAACTGACACTCACAGTCTTCTCTCATCAGAATaGGATGCCTACAGTGTTCTGGAAGGGGTGATCTCTTCCCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: PCLVRTDTHSLLSSE*DAYSVLEGVISSPN Trigger: ATTTGGGGAAGAGATCACCCCTTCCAGAACACTGTAGGCATCCCATTCTGATGAGAGAAGACTGTGAGTGTCAGTTCTCACGAGACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119991.8 |
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| CDS TCA 90 bp | TTCTTCGATGCTGTGATACTGGATCAGAGTGTTCTGAAGTTTAGTTaGAATAGAGGCAACATCAGACAGTCCTTCCAGTTTGATCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: FFDAVILDQSVLKFS*NRGNIRQSFQFDLP Trigger: AGGAAGATCAAACTGGAAGGACTGTCTGATGTTGCCTCTATTTCAACTAAACTTCAGAACACTCTGATCCAGTATCACAGCATCGAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025236.9 ENSMUST00000118990.2 ENSMUST00000119991.8 |
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| CDS TCA 72 bp | TGTTCTGGAAGGGGTGATCTCTTCCCCAAATGTCTGTaGTACTCTTCAAAGTGCTCCAGAACATCCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: CSGRGDLFPKCL*YSSKCSRTSRE Trigger: CTCCCTGGATGTTCTGGAGCACTTTGAAGAGTATCACAGACATTTGGGGAAGAGATCACCCCTTCCAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119991.8 |
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| CDS CCA 72 bp | GTGAGAACTGACACTCACAGTCTTCTCTCATCAGAATaGGATGCCTACAGTGTTCTGGAAGGGGTGATCTCT | + |
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Preference number: 6 (lower is better) Translates to: VRTDTHSLLSSE*DAYSVLEGVIS Trigger: AGAGATCACCCCTTCCAGAACACTGTAGGCATCCCATTCTGATGAGAGAAGACTGTGAGTGTCAGTTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119991.8 |
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| CDS CAA 72 bp | GTTGAAATAGAGGCAACATCAGACAGTCCTTCCAGTTaGATCTTCCTGCCAATCTGTGACCACGGGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: VEIEATSDSPSS*IFLPICDHGLS Trigger: TGAGAGCCCGTGGTCACAGATTGGCAGGAAGATCAAACTGGAAGGACTGTCTGATGTTGCCTCTATTTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025236.9 ENSMUST00000118990.2 ENSMUST00000119991.8 |
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