Pregenerated sensors for STARD3NL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003062Ensembl transcript IDs: ENSMUST00000039694.13, ENSMUST00000197565.3, ENSMUST00000200323.3, ENSMUST00000221380.2, ENSMUST00000222869.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGTGCTGCACTCAATACTACACATCTTCAGTCCCAAACTAGCCTaGATTTCAAACCAGACTCCCAGTGGGGGTAAAGAACTGCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: QVLHSILHIFSPKLA*ISNQTPSGGKELPH Trigger: GTGGGGCAGTTCTTTACCCCCACTGGGAGTCTGGTTTGAAATGCAGGCTAGTTTGGGACTGAAGATGTGTAGTATTGAGTGCAGCACTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| 3UTR CCA 90 bp | GTATTATACAGTTTGAGGTACTCATCTATTCATCCACCTGTCCACTaGCCCGGGATCAAACCGAGGCCAGACAAGTGCTGCACTCAATAC | + |
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Preference number: 1 (lower is better) Translates to: VLYSLRYSSIHPPVH*PGIKPRPDKCCTQY Trigger: GTATTGAGTGCAGCACTTGTCTGGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAATAGATGAGTACCTCAAACTGTATAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| 3UTR-3UTR TCA 90 bp | CACAGACTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTGCTGTCTTCCTTGGATaGCTCGCAGTGAGGTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: HRLEEGAQHDPVAAGRDGAVFLG*LAVRFF Trigger: GAAGAACCTCACTGCGAGTCATCCAAGGAAGACAGC...ACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 |
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| 3UTR-3UTR TCA 90 bp | GAAACTCACAGACTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGCTGTCTTCCTTGGATaGCTCGCAGTGAGGTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ETHRLEEGAQHDPVAAGRAVFLG*LAVRFF Trigger: GAAGAACCTCACTGCGAGTCATCCAAGGAAGACAGC...CCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTGAGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGTACTCATCTATTCATCCACCTGTCCACTGGCCCGGGATCAAACCGAGGCCAGTCCCAAACTAGCCTaGATTTCAAACCAGACTCCC | + |
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Preference number: 2 (lower is better) Translates to: EVLIYSSTCPLARDQTEASPKLA*ISNQTP Trigger: GGGAGTCTGGTTTGAAATGCAGGCTAGTTTGGGACT...GGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAATAGATGAGTACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| 3UTR-3UTR CCA 90 bp | ATTAAGCAGTCTTTTGATTCAGATGCAGCACAAGACCGAGTTATTCATTATCAGGGCCGCAGGCAGGGATaGTTTGAGTGGAGGTGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: IKQSFDSDAAQDRVIHYQGRRQG*FEWRWS Trigger: GCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCC...CTGATAATGAATAACTCGGTCTTGTGCTGCATCTGAATCAAAAGACTGCTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAAGCAGTCTTTTGATTCAGATGCAGCACAAGACCGAGTTATTCATTATCAGCAGGCAGGGATGGTTTaGGTGGAGGTGGAGCGATGT | + |
|
Preference number: 2 (lower is better) Translates to: IKQSFDSDAAQDRVIHYQQAGMV*VEVERC Trigger: ACATCGCTCCACCTCCACTCAAACCATCCCTGCCTG...CTGATAATGAATAACTCGGTCTTGTGCTGCATCTGAATCAAAAGACTGCTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAAGCAGTCTTTTGATTCAGATGCAGCACAAGACCGAGTTATTCATTATCAGCAGGGATGGTTTGAGTaGAGGTGGAGCGATGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: IKQSFDSDAAQDRVIHYQQGWFE*RWSDVH Trigger: ATGGACATCGCTCCACCTCCACTCAAACCATCCCTG...CTGATAATGAATAACTCGGTCTTGTGCTGCATCTGAATCAAAAGACTGCTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| 3UTR TCA 72 bp | GACCGAAACTCACAGACTAGAGGAAGGAGCACAGCATaGCCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: DRNSQTRGRSTA*PSGRRQGWFEW Trigger: CCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTGAGTTTCGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| 3UTR CCA 72 bp | AGTTTGAGGTACTCATCTATTCATCCACCTGTCCACTaGCCCGGGATCAAACCGAGGCCAGACAAGTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SLRYSSIHPPVH*PGIKPRPDKCC Trigger: GCAGCACTTGTCTGGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAATAGATGAGTACCTCAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| 3UTR CCA 72 bp | AGCAGCAAGCAGAGCCACCACTTCAGCTGTCTTCCTTaGATGACTCGCAGTGAGGTTCTTCACATTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSKQSHHFSCLP*MTRSEVLHIHR Trigger: TCTGTGAATGTGAAGAACCTCACTGCGAGTCATCCAAGGAAGACAGCTGAAGTGGTGGCTCTGCTTGCTGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 |
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| 3UTR GCA 72 bp | CACTCAATACTACACATCTTCAGTCCCAAACTAGCCTaGATTTCAAACCAGACTCCCAGTGGGGGTAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: HSILHIFSPKLA*ISNQTPSGGKE Trigger: TTCTTTACCCCCACTGGGAGTCTGGTTTGAAATGCAGGCTAGTTTGGGACTGAAGATGTGTAGTATTGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| CDS-3UTR TCA 90 bp | GGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAAGAGCCCTGCAGGGATaGGAGCCGCCCTCTCGGACG | + |
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Preference number: 4 (lower is better) Translates to: GAQHDPVAAGRDGLSGGGRALQG*EPPSRT Trigger: CGTCCGAGAGGGCGGCTCTCATCCCTGCAGGGCTCT...TCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR TCA 90 bp | CATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGATGTCCAGAGCCCTGCAGGGATaGGAGCCGCCCTCTCGGACG | + |
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Preference number: 4 (lower is better) Translates to: HDPVAAGRDGLSGGGAMSRALQG*EPPSRT Trigger: CGTCCGAGAGGGCGGCTCTCATCCCTGCAGGGCTCT...GGACATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR TCA 90 bp | CACAGACTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTAGAGCCCTGCAGGGATaGGAGCCGCCCTCTCGGACG | + |
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Preference number: 4 (lower is better) Translates to: HRLEEGAQHDPVAAGRDGRALQG*EPPSRT Trigger: CGTCCGAGAGGGCGGCTCTCATCCCTGCAGGGCTCT...ACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR GCA 90 bp | GGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAACCATCAGAGAGCCCTaGAGGGATGAGAGCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: GAQHDPVAAGRDGLSGGGTIREP*RDESRP Trigger: AGGGCGGCTCTCATCCCTGCAGGGCTCTCTGATGGT...TCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR TCA 90 bp | GTACTCATCTATTCATCCACCTGTCCACTGGCCCGGGATCAAACCGAGGCCAGAAGAGCCCTGCAGGGATaGGAGCCGCCCTCTCGGACG | + |
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Preference number: 4 (lower is better) Translates to: VLIYSSTCPLARDQTEARRALQG*EPPSRT Trigger: CGTCCGAGAGGGCGGCTCTCATCCCTGCAGGGCTCT...TCTGGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAATAGATGAGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| CDS-3UTR GCA 90 bp | CACAGACTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTACCATCAGAGAGCCCTaGAGGGATGAGAGCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: HRLEEGAQHDPVAAGRDGTIREP*RDESRP Trigger: AGGGCGGCTCTCATCCCTGCAGGGCTCTCTGATGGT...ACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR TCA 90 bp | GAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTCTCTCGGACGCATCCTaGACGAGCAGGAGTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: EGAQHDPVAAGRDGLSGGLSDAS*TSRSPL Trigger: CAAAGGACTCCTGCTCGTTCAGGATGCGTCCGAGAG...ACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222869.2 |
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| 3UTR CAA 72 bp | GCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTaGAGTGGAGGTGGAGCGATGTCCATGAGGTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: AQHDPVAAGRDG*SGGGAMSMRYH Trigger: GTGATACCTCATGGACATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR TCA 90 bp | GAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGACTCTCGGACGCATCCTaGACGAGCAGGAGTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: EEGAQHDPVAAGRDGLSGLSDAS*TSRSLF Trigger: AAACAGACTCCTGCTCGTTCAGGATGCGTCCGAGAG...TCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 |
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| CDS-3UTR TCA 90 bp | GGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCTGTCTTCCTTGGATaGCTCGCAGTGAGGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GAQHDPVAAGRDGLSGGGAVFLG*LAVRFF Trigger: GAAGAACCTCACTGCGAGTCATCCAAGGAAGACAGC...TCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR GCA 90 bp | CGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGATGTCCATGAGGTATCACCAACCATCAGAGAGCCCTaGAGGGATGAGAGCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RRQGWFEWRWSDVHEVSPTIREP*RDESRP Trigger: AGGGCGGCTCTCATCCCTGCAGGGCTCTCTGATGGT...TGGTGATACCTCATGGACATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR GCA 90 bp | GAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGACAGCGATGGCTTACCTaGTTCAGACTCAGGAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: EEGAQHDPVAAGRDGLSGQRWLT*FRLRRG Trigger: TCCCCTCCTGAGTCTGAAGCAGGTAAGCCATCGCTG...TCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221380.2 |
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| CDS-3UTR CCA 90 bp | GCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGGCTATTGCCCACCAATaGCGCAATCTGCATACAGCA | + |
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Preference number: 4 (lower is better) Translates to: AQHDPVAAGRDGLSGGGAAIAHQ*RNLHTA Trigger: TGCTGTATGCAGATTGCGCCATTGGTGGGCAATAGC...CGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR TCA 90 bp | ACTCACAGACTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATCTCTCGGACGCATCCTaGACGAGCAGGAGTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: THRLEEGAQHDPVAAGRDLSDAS*TSRSLF Trigger: AAACAGACTCCTGCTCGTTCAGGATGCGTCCGAGAG...ATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 |
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| CDS-3UTR GCA 90 bp | GCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGTTCTTCTTCAGATCCTaGTTCAGACTCAGGAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: AQHDPVAAGRDGLSGGGAFFFRS*FRLRRG Trigger: TCCCCTCCTGAGTCTGAAGCAGGATCTGAAGAAGAA...CGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000222869.2 |
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| CDS-3UTR CCA 90 bp | CACAGACTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTGCAGGGTTGATGGAATaGATGTCTCGCAGAGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: HRLEEGAQHDPVAAGRDGAGLME*MSRREA Trigger: CGCTTCTCTGCGAGACATCCATTCCATCAACCCTGC...ACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR CCA 90 bp | GAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGACCTCAGAGTCAGCGATaGCTTACCTGCTTCAGACTC | + |
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Preference number: 4 (lower is better) Translates to: EEGAQHDPVAAGRDGLSGPQSQR*LTCFRL Trigger: GAGTCTGAAGCAGGTAAGCCATCGCTGACTCTGAGG...TCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221380.2 |
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| CDS-3UTR TCA 90 bp | GGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGATTGGATGACTCGCAGTaGGGTTCTTCACATTCACAG | + |
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Preference number: 4 (lower is better) Translates to: GAQHDPVAAGRDGLSGGGLDDSQ*GSSHSQ Trigger: CTGTGAATGTGAAGAACCTCACTGCGAGTCATCCAA...TCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR CCA 90 bp | ATTCATCCACCTGTCCACTGGCCCGGGATCAAACCGAGGCCAGACAAGTGCTGCGCAGGGTTGATGGAATaGATGTCTCGCAGAGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: IHPPVHWPGIKPRPDKCCAGLME*MSRREA Trigger: CGCTTCTCTGCGAGACATCCATTCCATCAACCCTGC...GCAGCACTTGTCTGGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| CDS-3UTR TCA 90 bp | CAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGATGCTTGAGGTAACACTTTaGAATCCAGGAACCACGTCT | + |
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Preference number: 4 (lower is better) Translates to: QHDPVAAGRDGLSGGGAMLEVTL*NPGTTS Trigger: AGACGTGGTTCCTGGATTTCAAAGTGTTACCTCAAG...CATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 |
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| CDS-3UTR TCA 90 bp | GCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGTCTTCTTCTGCCTCTTaGGGTAACACTTTGAAATCC | + |
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Preference number: 4 (lower is better) Translates to: AQHDPVAAGRDGLSGGGASSSAS*GNTLKS Trigger: GGATTTCAAAGTGTTACCTCAAGAGGCAGAAGAAGA...CGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 |
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| CDS-3UTR TCA 90 bp | TACTCATCTATTCATCCACCTGTCCACTGGCCCGGGATCAAACCGAGGCCAGACCTCTCGGACGCATCCTaGACGAGCAGGAGTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: YSSIHPPVHWPGIKPRPDLSDAS*TSRSLF Trigger: AAACAGACTCCTGCTCGTTCAGGATGCGTCCGAGAG...GTCTGGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAATAGATGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| CDS-3UTR TCA 90 bp | CGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGATGTCCATGAGGTATCACCAGCTGTCTTCCTTGGATaGCTCGCAGTGAGGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RRQGWFEWRWSDVHEVSPAVFLG*LAVRFF Trigger: GAAGAACCTCACTGCGAGTCATCCAAGGAAGACAGC...TGGTGATACCTCATGGACATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR GCA 90 bp | GAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGATTCTTCTTCAGATCCTaGTTCAGACTCAGGAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: EEGAQHDPVAAGRDGLSGFFFRS*FRLRRG Trigger: TCCCCTCCTGAGTCTGAAGCAGGATCTGAAGAAGAA...TCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000222869.2 |
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| CDS-3UTR GCA 90 bp | ACTCATCTATTCATCCACCTGTCCACTGGCCCGGGATCAAACCGAGGCCAGACACGAGCTGTTCCTTCCTaGTTCAGACTCAGGAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: THLFIHLSTGPGSNRGQTRAVPS*FRLRRG Trigger: TCCCCTCCTGAGTCTGAAGCAGGAAGGAACAGCTCG...TGTCTGGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAATAGATGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| CDS-3UTR CCA 90 bp | CGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGATGTCCATGAGGTATCACCAGCAGGGTTGATGGAATaGATGTCTCGCAGAGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: RRQGWFEWRWSDVHEVSPAGLME*MSRREA Trigger: CGCTTCTCTGCGAGACATCCATTCCATCAACCCTGC...TGGTGATACCTCATGGACATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR TCA 90 bp | CAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGATGGACAAAAAGTCCTCCTaGCATCAGAAATGCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: QHDPVAAGRDGLSGGGAMDKKSS*HQKCLS Trigger: AGAAAGGCATTTCTGATGTCAGGAGGACTTTTTGTC...CATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR TCA 90 bp | CACAGACTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTCTTGAGGTAACACTTTaGAATCCAGGAACCACGTCT | + |
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Preference number: 4 (lower is better) Translates to: HRLEEGAQHDPVAAGRDGLEVTL*NPGTTS Trigger: AGACGTGGTTCCTGGATTTCAAAGTGTTACCTCAAG...ACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 |
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| CDS-3UTR TCA 90 bp | CATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGATGTCCTCTTCTTCTGCCTCTTaGGGTAACACTTTGAAATCC | + |
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Preference number: 4 (lower is better) Translates to: HDPVAAGRDGLSGGGAMSSSSAS*GNTLKS Trigger: GGATTTCAAAGTGTTACCTCAAGAGGCAGAAGAAGA...GGACATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 |
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| CDS-3UTR TCA 90 bp | ACTCACAGACTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATTTGGATGACTCGCAGTaGGGTTCTTCACATTCACAG | + |
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Preference number: 4 (lower is better) Translates to: THRLEEGAQHDPVAAGRDLDDSQ*GSSHSQ Trigger: CTGTGAATGTGAAGAACCTCACTGCGAGTCATCCAA...ATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR GCA 90 bp | GAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTACCAATGGCGCAATCTaGATACAGCATACCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EGAQHDPVAAGRDGLSGGTNGAI*IQHTQV Trigger: TACTTGGGTATGCTGTATGCAGATTGCGCCATTGGT...ACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CCA 90 bp | TACTCATCTATTCATCCACCTGTCCACTGGCCCGGGATCAAACCGAGGCCAGACCAGCCGCACCTCCACTaGGCTGTGATGATTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YSSIHPPVHWPGIKPRPDQPHLH*AVMISV Trigger: TACAGAAATCATCACAGCCCAGTGGAGGTGCGGCTG...GTCTGGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAATAGATGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
||
| CDS-3UTR TCA 90 bp | GAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGACAAAAAGTCCTCCTaGCATCAGAAATGCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGAQHDPVAAGRDGLSGGDKKSS*HQKCLS Trigger: AGAAAGGCATTTCTGATGTCAGGAGGACTTTTTGTC...ACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR GCA 90 bp | ACTCACAGACTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATACCAATGGCGCAATCTaGATACAGCATACCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: THRLEEGAQHDPVAAGRDTNGAI*IQHTQV Trigger: TACTTGGGTATGCTGTATGCAGATTGCGCCATTGGT...ATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR GCA 90 bp | ATTCATCCACCTGTCCACTGGCCCGGGATCAAACCGAGGCCAGACAAGTGCTGCACCAATGGCGCAATCTaGATACAGCATACCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IHPPVHWPGIKPRPDKCCTNGAI*IQHTQV Trigger: TACTTGGGTATGCTGTATGCAGATTGCGCCATTGGT...GCAGCACTTGTCTGGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
||
| CDS-3UTR GCA 90 bp | GGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGACAATACATAGCCAAATaGCCCTTGAGAGAAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GAQHDPVAAGRDGLSGGGQYIAK*PLREKL Trigger: AAGCTTTTCTCTCAAGGGGCATTTGGCTATGTATTG...TCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 |
||
| CDS-3UTR TCA 90 bp | ACTCACAGACTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGACAAAAAGTCCTCCTaGCATCAGAAATGCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: THRLEEGAQHDPVAAGRDDKKSS*HQKCLS Trigger: AGAAAGGCATTTCTGATGTCAGGAGGACTTTTTGTC...ATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR TCA 90 bp | ATTCATCCACCTGTCCACTGGCCCGGGATCAAACCGAGGCCAGACAAGTGCTGCTCTTCTTCTGCCTCTTaGGGTAACACTTTGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: IHPPVHWPGIKPRPDKCCSSSAS*GNTLKS Trigger: GGATTTCAAAGTGTTACCTCAAGAGGCAGAAGAAGA...GCAGCACTTGTCTGGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
||
| CDS-3UTR GCA 90 bp | AGTATTATACAGTTTGAGGTACTCATCTATTCATCCACCTGTCCACTGGCCCGGACCATCAGAGAGCCCTaGAGGGATGAGAGCCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIIQFEVLIYSSTCPLARTIREP*RDESRP Trigger: AGGGCGGCTCTCATCCCTGCAGGGCTCTCTGATGGT...CCGGGCCAGTGGACAGGTGGATGAATAGATGAGTACCTCAAACTGTATAATACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
||
| CDS-3UTR TCA 90 bp | AGCTGTCTTCCTTGGATGACTCGCAGTGAGGTTCTTCACATTCACAGAGCAGAACTCTCGGACGCATCCTaGACGAGCAGGAGTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SCLPWMTRSEVLHIHRAELSDAS*TSRSLF Trigger: AAACAGACTCCTGCTCGTTCAGGATGCGTCCGAGAG...TTCTGCTCTGTGAATGTGAAGAACCTCACTGCGAGTCATCCAAGGAAGACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 |
||
| CDS-3UTR GCA 90 bp | GAGGTACTCATCTATTCATCCACCTGTCCACTGGCCCGGGATCAAACCGAGGCCCAATACATAGCCAAATaGCCCTTGAGAGAAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EVLIYSSTCPLARDQTEAQYIAK*PLREKL Trigger: AAGCTTTTCTCTCAAGGGGCATTTGGCTATGTATTG...GGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAATAGATGAGTACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
||
| CDS-3UTR TCA 90 bp | TCAGCATCCAGCAGCAAGCAGAGCCACCACTTCAGCTGTCTTCCTTGGATGACTTCTTCTTCTGCCTCTTaGGGTAACACTTTGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SASSSKQSHHFSCLPWMTSSSAS*GNTLKS Trigger: GGATTTCAAAGTGTTACCTCAAGAGGCAGAAGAAGA...AGTCATCCAAGGAAGACAGCTGAAGTGGTGGCTCTGCTTGCTGCTGGATGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 |
||
| CDS-3UTR CCA 90 bp | AGTATTATACAGTTTGAGGTACTCATCTATTCATCCACCTGTCCACTGGCCCGGTTCCTTCTCTGCAACTaGAAGCTTTGGGAACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIIQFEVLIYSSTCPLARFLLCN*KLWEQS Trigger: GCTTTGTTCCCAAAGCTTCCAGTTGCAGAGAAGGAA...CCGGGCCAGTGGACAGGTGGATGAATAGATGAGTACCTCAAACTGTATAATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
||
| CDS-3UTR TCA 90 bp | AGTATTATACAGTTTGAGGTACTCATCTATTCATCCACCTGTCCACTGGCCCGGGACAAAAAGTCCTCCTaGCATCAGAAATGCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIIQFEVLIYSSTCPLARDKKSS*HQKCLS Trigger: AGAAAGGCATTTCTGATGTCAGGAGGACTTTTTGTC...CCGGGCCAGTGGACAGGTGGATGAATAGATGAGTACCTCAAACTGTATAATACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
||
| CDS-3UTR CCA 90 bp | TTCAATATATTAAGCAGTCTTTTGATTCAGATGCAGCACAAGACCGAGTTATTCGCAGGGTTGATGGAATaGATGTCTCGCAGAGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FNILSSLLIQMQHKTELFAGLME*MSRREA Trigger: CGCTTCTCTGCGAGACATCCATTCCATCAACCCTGC...GAATAACTCGGTCTTGTGCTGCATCTGAATCAAAAGACTGCTTAATATATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR GCA 90 bp | ATTAAGCAGTCTTTTGATTCAGATGCAGCACAAGACCGAGTTATTCATTATCAGACCAATGGCGCAATCTaGATACAGCATACCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IKQSFDSDAAQDRVIHYQTNGAI*IQHTQV Trigger: TACTTGGGTATGCTGTATGCAGATTGCGCCATTGGT...CTGATAATGAATAACTCGGTCTTGTGCTGCATCTGAATCAAAAGACTGCTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR GCA 90 bp | TTCAATATATTAAGCAGTCTTTTGATTCAGATGCAGCACAAGACCGAGTTATTCTTCTTCTTCAGATCCTaGTTCAGACTCAGGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FNILSSLLIQMQHKTELFFFFRS*FRLRRG Trigger: TCCCCTCCTGAGTCTGAAGCAGGATCTGAAGAAGAA...GAATAACTCGGTCTTGTGCTGCATCTGAATCAAAAGACTGCTTAATATATTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000222869.2 |
||
| CDS-3UTR TCA 90 bp | AATAAGTTAGTATTATACAGTTTGAGGTACTCATCTATTCATCCACCTGTCCACCTTGAGGTAACACTTTaGAATCCAGGAACCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NKLVLYSLRYSSIHPPVHLEVTL*NPGTTS Trigger: AGACGTGGTTCCTGGATTTCAAAGTGTTACCTCAAG...GTGGACAGGTGGATGAATAGATGAGTACCTCAAACTGTATAATACTAACTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
||
| CDS-3UTR GCA 90 bp | TTCAATATATTAAGCAGTCTTTTGATTCAGATGCAGCACAAGACCGAGTTATTCACCAATGGCGCAATCTaGATACAGCATACCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FNILSSLLIQMQHKTELFTNGAI*IQHTQV Trigger: TACTTGGGTATGCTGTATGCAGATTGCGCCATTGGT...GAATAACTCGGTCTTGTGCTGCATCTGAATCAAAAGACTGCTTAATATATTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR TCA 90 bp | TTCAATATATTAAGCAGTCTTTTGATTCAGATGCAGCACAAGACCGAGTTATTCGACAAAAAGTCCTCCTaGCATCAGAAATGCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FNILSSLLIQMQHKTELFDKKSS*HQKCLS Trigger: AGAAAGGCATTTCTGATGTCAGGAGGACTTTTTGTC...GAATAACTCGGTCTTGTGCTGCATCTGAATCAAAAGACTGCTTAATATATTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR GCA 90 bp | ATTAAGCAGTCTTTTGATTCAGATGCAGCACAAGACCGAGTTATTCATTATCAGCAATACATAGCCAAATaGCCCTTGAGAGAAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IKQSFDSDAAQDRVIHYQQYIAK*PLREKL Trigger: AAGCTTTTCTCTCAAGGGGCATTTGGCTATGTATTG...CTGATAATGAATAACTCGGTCTTGTGCTGCATCTGAATCAAAAGACTGCTTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAATGAGCTGCGCAGGGTaGATGGAATGGATGTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: GAQHDPVAAGRDGLSGGGMSCAG*MEWMSR Trigger: GCGAGACATCCATTCCATCAACCCTGCGCAGCTCAT...TCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CAA 90 bp | CAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGATGATGAGCTGCGCAGGGTaGATGGAATGGATGTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QHDPVAAGRDGLSGGGAMMSCAG*MEWMSR Trigger: GCGAGACATCCATTCCATCAACCCTGCGCAGCTCAT...CATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS TCA 90 bp | ACTCAGGAGGGGAGTAAAACTGACCATCAGAGAGCCCTGCAGGGATaGGAGCCGCCCTCTCGGACGCATCCTGAACGAGCAGGAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TQEGSKTDHQRALQG*EPPSRTHPERAGVC Trigger: ACAGACTCCTGCTCGTTCAGGATGCGTCCGAGAGGGCGGCTCTCATCCCTGCAGGGCTCTCTGATGGTCAGTTTTACTCCCCTCCTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000200323.3 ENSMUST00000221380.2 |
||
| CDS TCA 90 bp | ACTCAGGAGGGGAGTAAAACTGACCATCAGAGAGCCCTGCAGGGATaGGAGCCGCCCTCTCGGACGCATCCTGAACGAGCAGGAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TQEGSKTDHQRALQG*EPPSRTHPERAGVL Trigger: AAGGACTCCTGCTCGTTCAGGATGCGTCCGAGAGGGCGGCTCTCATCCCTGCAGGGCTCTCTGATGGTCAGTTTTACTCCCCTCCTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222869.2 |
||
| CDS GCA 90 bp | TGCTTCAGACTCAGGAGGGGAGTAAAACTGACCATCAGAGAGCCCTaGAGGGATGAGAGCCGCCCTCTCGGACGCATCCTGAACGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CFRLRRGVKLTIREP*RDESRPLGRILNEQ Trigger: CTGCTCGTTCAGGATGCGTCCGAGAGGGCGGCTCTCATCCCTGCAGGGCTCTCTGATGGTCAGTTTTACTCCCCTCCTGAGTCTGAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000200323.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CAA 90 bp | CTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTATGAGCTGCGCAGGGTaGATGGAATGGATGTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LEEGAQHDPVAAGRDGLSMSCAG*MEWMSR Trigger: GCGAGACATCCATTCCATCAACCCTGCGCAGCTCAT...ACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CAA 90 bp | CAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGATGCTGTTGTTAACGCTATaGCCCACCAATGGCGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: QHDPVAAGRDGLSGGGAMLLLTL*PTNGAI Trigger: GATTGCGCCATTGGTGGGCAATAGCGTTAACAACAG...CATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CAA 90 bp | CACAGACTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTCTGTTGTTAACGCTATaGCCCACCAATGGCGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: HRLEEGAQHDPVAAGRDGLLLTL*PTNGAI Trigger: GATTGCGCCATTGGTGGGCAATAGCGTTAACAACAG...ACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CAA 90 bp | ACTCACAGACTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATCTGTTGTTAACGCTATaGCCCACCAATGGCGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: THRLEEGAQHDPVAAGRDLLLTL*PTNGAI Trigger: GATTGCGCCATTGGTGGGCAATAGCGTTAACAACAG...ATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CAA 90 bp | GCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGCCAAGTATCAGCACTTaGAATCGAAAAACTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AQHDPVAAGRDGLSGGGAPSIST*NRKTAK Trigger: TTTGGCAGTTTTTCGATTCAAAGTGCTGATACTTGG...CGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CAA 90 bp | GCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGCTTGAGAGAAAAGCTTaGAGAGGATCACTTTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: AQHDPVAAGRDGLSGGGALERKA*RGSLLL Trigger: TAGCAAAAGTGATCCTCTCAAAGCTTTTCTCTCAAG...CGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 |
||
| CDS-3UTR CAA 90 bp | CAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGATGCCAAGTATCAGCACTTaGAATCGAAAAACTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QHDPVAAGRDGLSGGGAMPSIST*NRKTAK Trigger: TTTGGCAGTTTTTCGATTCAAAGTGCTGATACTTGG...CATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGATTGAGAGGATCACTTTaGCTAATAGAAAGGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: EEGAQHDPVAAGRDGLSGLRGSL*LIERHW Trigger: CCAGTGCCTTTCTATTAGCAAAAGTGATCCTCTCAA...TCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CAA 90 bp | CACAGACTAGAGGAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGAGGATCACTTTaGCTAATAGAAAGGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: HRLEEGAQHDPVAAGRDGLRGSL*LIERHW Trigger: CCAGTGCCTTTCTATTAGCAAAAGTGATCCTCTCAA...ACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTCCTCTAGTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CAA 90 bp | CAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGATGCTTGAGAGAAAAGCTTaGAGAGGATCACTTTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: QHDPVAAGRDGLSGGGAMLERKA*RGSLLL Trigger: TAGCAAAAGTGATCCTCTCAAAGCTTTTCTCTCAAG...CATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 |
||
| CDS CCA 90 bp | TCAGCATCCAGCAGCAAGCAGAGCCACCACTTCAGCTGTCTTCCTTaGATGACTCGCAGTGAGGTTCTTCACATTCACAGAGCAGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: SASSSKQSHHFSCLP*MTRSEVLHIHRAEL Trigger: GAGTTCTGCTCTGTGAATGTGAAGAACCTCACTGCGAGTCATCCAAGGAAGACAGCTGAAGTGGTGGCTCTGCTTGCTGCTGGATGCTGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGAGCACAGCATGACCCAGTGGCCGCAGGCAGGGATGGTTTGAGTGGAGGTCCAAGTATCAGCACTTaGAATCGAAAAACTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: EGAQHDPVAAGRDGLSGGPSIST*NRKTAK Trigger: TTTGGCAGTTTTTCGATTCAAAGTGCTGATACTTGG...ACCTCCACTCAAACCATCCCTGCCTGCGGCCACTGGGTCATGCTGTGCTCCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGTCCCAAACTAGCCTGCATTTCAAACCAGACTCCCAGTGGGGGTAAAGAAATGAGCTGCGCAGGGTaGATGGAATGGATGTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: FSPKLACISNQTPSGGKEMSCAG*MEWMSR Trigger: GCGAGACATCCATTCCATCAACCCTGCGCAGCTCAT...TTCTTTACCCCCACTGGGAGTCTGGTTTGAAATGCAGGCTAGTTTGGGACTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
||
| CDS-3UTR CAA 90 bp | CGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGATGTCCATGAGGTATCACCATTGAGAGGATCACTTTaGCTAATAGAAAGGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRQGWFEWRWSDVHEVSPLRGSL*LIERHW Trigger: CCAGTGCCTTTCTATTAGCAAAAGTGATCCTCTCAA...TGGTGATACCTCATGGACATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
||
| CDS-3UTR CAA 90 bp | CGCAGGCAGGGATGGTTTGAGTGGAGGTGGAGCGATGTCCATGAGGTATCACCACCAAGTATCAGCACTTaGAATCGAAAAACTGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: RRQGWFEWRWSDVHEVSPPSIST*NRKTAK Trigger: TTTGGCAGTTTTTCGATTCAAAGTGCTGATACTTGG...TGGTGATACCTCATGGACATCGCTCCACCTCCACTCAAACCATCCCTGCCTGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR CAA 90 bp | GTACTCATCTATTCATCCACCTGTCCACTGGCCCGGGATCAAACCGAGGCCAGATTGAGAGGATCACTTTaGCTAATAGAAAGGCACTGG | + |
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Preference number: 5 (lower is better) Translates to: VLIYSSTCPLARDQTEARLRGSL*LIERHW Trigger: CCAGTGCCTTTCTATTAGCAAAAGTGATCCTCTCAA...TCTGGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAATAGATGAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| CDS TCA 90 bp | CAAGCAGAGCCACCACTTCAGCTGTCTTCCTTGGATGACTCGCAGTaGGGTTCTTCACATTCACAGAGCAGAACTCATAGTTCCAAAAGC | + |
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Preference number: 5 (lower is better) Translates to: QAEPPLQLSSLDDSQ*GSSHSQSRTHSSKS Trigger: GCTTTTGGAACTATGAGTTCTGCTCTGTGAATGTGAAGAACCTCACTGCGAGTCATCCAAGGAAGACAGCTGAAGTGGTGGCTCTGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR CAA 90 bp | ACTCATCTATTCATCCACCTGTCCACTGGCCCGGGATCAAACCGAGGCCAGACACCAAGTATCAGCACTTaGAATCGAAAAACTGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: THLFIHLSTGPGSNRGQTPSIST*NRKTAK Trigger: TTTGGCAGTTTTTCGATTCAAAGTGCTGATACTTGG...TGTCTGGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAATAGATGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| CDS-3UTR CAA 90 bp | TTCAGTCCCAAACTAGCCTGCATTTCAAACCAGACTCCCAGTGGGGGTAAAGAACTGTTGTTAACGCTATaGCCCACCAATGGCGCAATC | + |
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Preference number: 5 (lower is better) Translates to: FSPKLACISNQTPSGGKELLLTL*PTNGAI Trigger: GATTGCGCCATTGGTGGGCAATAGCGTTAACAACAG...TTCTTTACCCCCACTGGGAGTCTGGTTTGAAATGCAGGCTAGTTTGGGACTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| CDS-3UTR CAA 90 bp | AGGTACTCATCTATTCATCCACCTGTCCACTGGCCCGGGATCAAACCGAGGCCACTTGAGAGAAAAGCTTaGAGAGGATCACTTTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: RYSSIHPPVHWPGIKPRPLERKA*RGSLLL Trigger: TAGCAAAAGTGATCCTCTCAAAGCTTTTCTCTCAAG...TGGCCTCGGTTTGATCCCGGGCCAGTGGACAGGTGGATGAATAGATGAGTACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| CDS-3UTR CAA 90 bp | AGCTGTCTTCCTTGGATGACTCGCAGTGAGGTTCTTCACATTCACAGAGCAGAACTTGAGAGAAAAGCTTaGAGAGGATCACTTTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: SCLPWMTRSEVLHIHRAELERKA*RGSLLL Trigger: TAGCAAAAGTGATCCTCTCAAAGCTTTTCTCTCAAG...TTCTGCTCTGTGAATGTGAAGAACCTCACTGCGAGTCATCCAAGGAAGACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 |
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| CDS-3UTR CAA 90 bp | TTCAATATATTAAGCAGTCTTTTGATTCAGATGCAGCACAAGACCGAGTTATTCATGAGCTGCGCAGGGTaGATGGAATGGATGTCTCGC | + |
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Preference number: 5 (lower is better) Translates to: FNILSSLLIQMQHKTELFMSCAG*MEWMSR Trigger: GCGAGACATCCATTCCATCAACCCTGCGCAGCTCAT...GAATAACTCGGTCTTGTGCTGCATCTGAATCAAAAGACTGCTTAATATATTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS-3UTR CAA 90 bp | ATTAAGCAGTCTTTTGATTCAGATGCAGCACAAGACCGAGTTATTCATTATCAGACGAGCAGGAGTCCTTaGAGAGGATCACTTTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: IKQSFDSDAAQDRVIHYQTSRSP*RGSLLL Trigger: TAGCAAAAGTGATCCTCTCAAAGGACTCCTGCTCGT...CTGATAATGAATAACTCGGTCTTGTGCTGCATCTGAATCAAAAGACTGCTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222869.2 |
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| CDS-3UTR CAA 90 bp | TTCAATATATTAAGCAGTCTTTTGATTCAGATGCAGCACAAGACCGAGTTATTCTTGAGAGGATCACTTTaGCTAATAGAAAGGCACTGG | + |
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Preference number: 5 (lower is better) Translates to: FNILSSLLIQMQHKTELFLRGSL*LIERHW Trigger: CCAGTGCCTTTCTATTAGCAAAAGTGATCCTCTCAA...GAATAACTCGGTCTTGTGCTGCATCTGAATCAAAAGACTGCTTAATATATTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS GCA 72 bp | CTCAGGAGGGGAGTAAAACTGACCATCAGAGAGCCCTaGAGGGATGAGAGCCGCCCTCTCGGACGCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: LRRGVKLTIREP*RDESRPLGRIL Trigger: CAGGATGCGTCCGAGAGGGCGGCTCTCATCCCTGCAGGGCTCTCTGATGGTCAGTTTTACTCCCCTCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000200323.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS CAA 90 bp | AGCCACATGGGTAGCCCAGGCCTTCCTTCTCTGCAACTGGAAGCTTaGGGAACAAAGCGGGCTCTAGTTCCAGCCGCACCTCCACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SHMGSPGLPSLQLEA*GTKRALVPAAPPLG Trigger: GCCCAGTGGAGGTGCGGCTGGAACTAGAGCCCGCTTTGTTCCCAAAGCTTCCAGTTGCAGAGAAGGAAGGCCTGGGCTACCCATGTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| CDS TCA 72 bp | GGGAGTAAAACTGACCATCAGAGAGCCCTGCAGGGATaGGAGCCGCCCTCTCGGACGCATCCTGAACGAGCA | + |
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Preference number: 6 (lower is better) Translates to: GSKTDHQRALQG*EPPSRTHPERA Trigger: TGCTCGTTCAGGATGCGTCCGAGAGGGCGGCTCTCATCCCTGCAGGGCTCTCTGATGGTCAGTTTTACTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000200323.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS TCA 72 bp | CCTGCAGGGATGAGAGCCGCCCTCTCGGACGCATCCTaGACGAGCAGGAGTCTGTTTTCTTCTTCTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PAGMRAALSDAS*TSRSLFSSSAS Trigger: AGAGGCAGAAGAAGAAAACAGACTCCTGCTCGTTCAGGATGCGTCCGAGAGGGCGGCTCTCATCCCTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000200323.3 ENSMUST00000221380.2 |
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| CDS TCA 72 bp | CCTGCAGGGATGAGAGCCGCCCTCTCGGACGCATCCTaGACGAGCAGGAGTCCTTTGAGAGGATCACTTTTG | + |
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Preference number: 6 (lower is better) Translates to: PAGMRAALSDAS*TSRSPLRGSLL Trigger: CAAAAGTGATCCTCTCAAAGGACTCCTGCTCGTTCAGGATGCGTCCGAGAGGGCGGCTCTCATCCCTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222869.2 |
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| CDS CAA 72 bp | GGTAGCCCAGGCCTTCCTTCTCTGCAACTGGAAGCTTaGGGAACAAAGCGGGCTCTAGTTCCAGCCGCACCT | + |
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Preference number: 6 (lower is better) Translates to: GSPGLPSLQLEA*GTKRALVPAAP Trigger: AGGTGCGGCTGGAACTAGAGCCCGCTTTGTTCCCAAAGCTTCCAGTTGCAGAGAAGGAAGGCCTGGGCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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| CDS CCA 72 bp | TCAATCCTGGCCATGAGCTGCGCAGGGTTGATGGAATaGATGTCTCGCAGAGAAGCGTGTGAGCTCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SILAMSCAGLME*MSRREACELWL Trigger: GAGCCAGAGCTCACACGCTTCTCTGCGAGACATCCATTCCATCAACCCTGCGCAGCTCATGGCCAGGATTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000200323.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS TCA 72 bp | AGGGTTGATGGAATGGATGTCTCGCAGAGAAGCGTGTaGGCTCTGGCTCCCCGTCAGAGTGTTCTCCATGTG | + |
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Preference number: 6 (lower is better) Translates to: RVDGMDVSQRSV*ALAPRQSVLHV Trigger: CACATGGAGAACACTCTGACGGGGAGCCAGAGCTCACACGCTTCTCTGCGAGACATCCATTCCATCAACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000200323.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS CCA 72 bp | CTGGTCACTGCTGTTGTTAACGCTATTGCCCACCAATaGCGCAATCTGCATACAGCATACCCAAGTATCAGC | + |
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Preference number: 6 (lower is better) Translates to: LVTAVVNAIAHQ*RNLHTAYPSIS Trigger: GCTGATACTTGGGTATGCTGTATGCAGATTGCGCCATTGGTGGGCAATAGCGTTAACAACAGCAGTGACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039694.13 ENSMUST00000197565.3 ENSMUST00000200323.3 ENSMUST00000221380.2 ENSMUST00000222869.2 |
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| CDS GCA 72 bp | CTGTATTCCCATTCTAAATGCCGAGCTGTTCCTTCCTaGTTCAGACTCAGGAGGGGAGTAAAACTGACCATC | + |
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Preference number: 6 (lower is better) Translates to: LYSHSKCRAVPS*FRLRRGVKLTI Trigger: GATGGTCAGTTTTACTCCCCTCCTGAGTCTGAAGCAGGAAGGAACAGCTCGGCATTTAGAATGGGAATACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200323.3 |
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