Pregenerated sensors for STAR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031574Ensembl transcript IDs: ENSMUST00000033979.6, ENSMUST00000210565.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAATCCAGGACCCAAGACCCGGGTGGGGGTCGAAGGCACACTCCTaGAGTTGTCCTCTGACCTCCACGTGTCTGCTGGGGCCCATGCAC | + |
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Preference number: 1 (lower is better) Translates to: TIQDPRPGWGSKAHS*SCPLTSTCLLGPMH Trigger: GTGCATGGGCCCCAGCAGACACGTGGAGGTCAGAGGACAACTTCAGGAGTGTGCCTTCGACCCCCACCCGGGTCTTGGGTCCTGGATTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CCA 90 bp | CTAATCCAATCAAAGCCACAGTGTTTGCTGAAGGCGCTTCTCCACTaGCAGCCTGTTGTCTCGAGGCCGGCACACATGGGTCTTTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: LIQSKPQCLLKALLH*QPVVSRPAHMGLSA Trigger: TGCTGAAAGACCCATGTGTGCCGGCCTCGAGACAACAGGCTGCCAGTGGAGAAGCGCCTTCAGCAAACACTGTGGCTTTGATTGGATTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR TCA 90 bp | CGGCACACATGGGTCTTTCAGCACCCAAGTGGCTGCTCTCTTAACTaGTTCCCGGGATGGTTCTATCAGAAACACTCTACAGCTGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: RHTWVFQHPSGCSLN*FPGWFYQKHSTAAL Trigger: GAGGGCAGCTGTAGAGTGTTTCTGATAGAACCATCCCGGGAATCAGTTAAGAGAGCAGCCACTTGGGTGCTGAAAGACCCATGTGTGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR GCA 90 bp | TCCAAGCTGGCCTGGAACTTGGAGCGATTCACTGGTGTCACCATTTaGAGTGTTGAGATTAAAGCTGTTGAGCCACCGTGCCCGACAAGG | + |
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Preference number: 1 (lower is better) Translates to: SKLAWNLERFTGVTI*SVEIKAVEPPCPTR Trigger: CCTTGTCGGGCACGGTGGCTCAACAGCTTTAATCTCAACACTGCAAATGGTGACACCAGTGAATCGCTCCAAGTTCCAGGCCAGCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CCA 90 bp | TGTTCCTGCTTTTGTGAGACGGTCTCACTGGGGTCCAAGCTGGCCTaGAACTTGGAGCGATTCACTGGTGTCACCATTTGCAGTGTTGAG | + |
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Preference number: 1 (lower is better) Translates to: CSCFCETVSLGSKLA*NLERFTGVTICSVE Trigger: CTCAACACTGCAAATGGTGACACCAGTGAATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTGAGACCGTCTCACAAAAGCAGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CCA 90 bp | ACCAACTCCCAAGATTTTGTTCCTGCTTTTGTGAGACGGTCTCACTaGGGTCCAAGCTGGCCTGGAACTTGGAGCGATTCACTGGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: TNSQDFVPAFVRRSH*GPSWPGTWSDSLVS Trigger: TGACACCAGTGAATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTGAGACCGTCTCACAAAAGCAGGAACAAAATCTTGGGAGTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR TCA 90 bp | GCCCCACCATTAATCCCAGCACTTGAGAGGCAGAGGCAGAAGGGTTaGTATAAGTTCCAGGCCATCTTGGGCTACAGAATGAGTGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: APPLIPALERQRQKG*YKFQAILGYRMSEK Trigger: CTTCTCACTCATTCTGTAGCCCAAGATGGCCTGGAACTTATATCAACCCTTCTGCCTCTGCCTCTCAAGTGCTGGGATTAATGGTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR GCA 90 bp | GTTAATGGGTGTTCAGCCTACATATCTGTATGTCTATGTACCACTTaGATACCTGGTCCCCATGGCGGCCACAAGAGGGCATCAGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: VNGCSAYISVCLCTT*IPGPHGGHKRASGS Trigger: GGAACCTGATGCCCTCTTGTGGCCGCCATGGGGACCAGGTATGCAAGTGGTACATAGACATACAGATATGTAGGCTGAACACCCATTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CCA 90 bp | GCTTTTGTGAGACGGTCTCACTGGGGTCCAAGCTGGCCTGGAACTTaGAGCGATTCACTGGTGTCACCATTTGCAGTGTTGAGATTAAAG | + |
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Preference number: 1 (lower is better) Translates to: AFVRRSHWGPSWPGT*SDSLVSPFAVLRLK Trigger: CTTTAATCTCAACACTGCAAATGGTGACACCAGTGAATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTGAGACCGTCTCACAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR GCA 90 bp | ACTTTTACAGAGTTTCCTAGGCAAGACCTTGCTTTGTGTGCACACTaGCTTCAGGTAGTGACATTTGGAGCTGGTAAGACAACAGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: TFTEFPRQDLALCAH*LQVVTFGAGKTTVP Trigger: GGGAACTGTTGTCTTACCAGCTCCAAATGTCACTACCTGAAGGCAGTGTGCACACAAAGCAAGGTCTTGCCTAGGAAACTCTGTAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR TCA 90 bp | GGCAGAAGGGTTGATATAAGTTCCAGGCCATCTTGGGCTACAGAATaGGTGAGAAGATCCTGTCTCAAAAGAACAATTGAAGTGAAACAA | + |
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Preference number: 1 (lower is better) Translates to: GRRVDISSRPSWATE*VRRSCLKRTIEVKQ Trigger: TTGTTTCACTTCAATTGTTCTTTTGAGACAGGATCTTCTCACTCATTCTGTAGCCCAAGATGGCCTGGAACTTATATCAACCCTTCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR TCA 90 bp | TGTATGTTCTTTATTGTCATGGGATTAGTAGGGAAGTCGGCACAATaGTGGTTTCATTTCTCCTCAGAGAAAAGTTGGAATACTCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: CMFFIVMGLVGKSAQ*WFHFSSEKSWNTLE Trigger: TTCCAGAGTATTCCAACTTTTCTCTGAGGAGAAATGAAACCATCATTGTGCCGACTTCCCTACTAATCCCATGACAATAAAGAACATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CCA 90 bp | AAAGGTTTCATAGCTACTTATCCCTTAGCCTTCACAGCTATGCAGTaGGAGACACTAGAGAACTTTTATTCTAAGCCTCATTTCTATTTT | + |
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Preference number: 1 (lower is better) Translates to: KGFIATYPLAFTAMQ*ETLENFYSKPHFYF Trigger: AAAATAGAAATGAGGCTTAGAATAAAAGTTCTCTAGTGTCTCCCACTGCATAGCTGTGAAGGCTAAGGGATAAGTAGCTATGAAACCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CAA 90 bp | CCAGGACCCAAGACCCGGGTGGGGGTCGAAGGCACACTCCTGAAGTaGTCCTCTGACCTCCACGTGTCTGCTGGGGCCCATGCACACTCA | + |
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Preference number: 2 (lower is better) Translates to: PGPKTRVGVEGTLLK*SSDLHVSAGAHAHS Trigger: TGAGTGTGCATGGGCCCCAGCAGACACGTGGAGGTCAGAGGACAACTTCAGGAGTGTGCCTTCGACCCCCACCCGGGTCTTGGGTCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGGTCCAAGCTGGCCTGGAACTTGGAGCGATTCACTGGTGTCACCATTTGGTTCTGCTGAAGCTGTaGTTCCTCAGGCTGGGACCT | + |
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Preference number: 2 (lower is better) Translates to: TGVQAGLELGAIHWCHHLVLLKL*FLRLGP Trigger: AGGTCCCAGCCTGAGGAATCACAGCTTCAGCAGAAC...CAAATGGTGACACCAGTGAATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR GCA 90 bp | GCTTTTGTGAGACGGTCTCACTGGGGTCCAAGCTGGCCTGGAACTTGGAGCGATGAGCTGCTGTGTGGATaGTGGAGATTGACCCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: AFVRRSHWGPSWPGTWSDELLCG*WRLTLD Trigger: ATCCAGGGTCAATCTCCAGCATCCACACAGCAGCTC...ATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTGAGACCGTCTCACAAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAGCCACAGTGTTTGCTGAAGGCGCTTCTCCACTGGCAGCCTGTTGTCTCCACTGGGGTCCAAGCTaGCCTGGAACTTGGAGCGAT | + |
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Preference number: 2 (lower is better) Translates to: IKATVFAEGASPLAACCLHWGPS*PGTWSD Trigger: ATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTG...GAGACAACAGGCTGCCAGTGGAGAAGCGCCTTCAGCAAACACTGTGGCTTTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR TCA 90 bp | GGTCTCACTGGGGTCCAAGCTGGCCTGGAACTTGGAGCGATTCACTGGTGTCACTGTGAGAGCTTCCAATaGTTTGCAGGTCAATGTGGT | + |
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Preference number: 2 (lower is better) Translates to: GLTGVQAGLELGAIHWCHCESFQ*FAGQCG Trigger: ACCACATTGACCTGCAAATCATTGGAAGCTCTCACA...GTGACACCAGTGAATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR TCA 90 bp | ATCAAAGCCACAGTGTTTGCTGAAGGCGCTTCTCCACTGGCAGCCTGTTGTCTCCCCGATGCTGTTAGCTaGAGATGGACAGACTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: IKATVFAEGASPLAACCLPDAVS*RWTDLQ Trigger: CTGCAAGTCTGTCCATCTTCAGCTAACAGCATCGGG...GAGACAACAGGCTGCCAGTGGAGAAGCGCCTTCAGCAAACACTGTGGCTTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR TCA 90 bp | GGTCTCACTGGGGTCCAAGCTGGCCTGGAACTTGGAGCGATTCACTGGTGTCACCTGACATGTACAGGCTaGAGTGTGCATGTATGTTCT | + |
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Preference number: 2 (lower is better) Translates to: GLTGVQAGLELGAIHWCHLTCTG*SVHVCS Trigger: AGAACATACATGCACACTTCAGCCTGTACATGTCAG...GTGACACCAGTGAATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR GCA 90 bp | ATCAAAGCCACAGTGTTTGCTGAAGGCGCTTCTCCACTGGCAGCCTGTTGTCTCGTCTGCTGGGGCCCATaGACACTCACACAGACATTA | + |
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Preference number: 2 (lower is better) Translates to: IKATVFAEGASPLAACCLVCWGP*TLTQTL Trigger: TAATGTCTGTGTGAGTGTGCATGGGCCCCAGCAGAC...GAGACAACAGGCTGCCAGTGGAGAAGCGCCTTCAGCAAACACTGTGGCTTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAGCCACAGTGTTTGCTGAAGGCGCTTCTCCACTGGCAGCCTGTTGTCTCCTGCTGTGTGGATGCTaGAGATTGACCCTGGATTCC | + |
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Preference number: 2 (lower is better) Translates to: IKATVFAEGASPLAACCLLLCGC*RLTLDS Trigger: GGAATCCAGGGTCAATCTCCAGCATCCACACAGCAG...GAGACAACAGGCTGCCAGTGGAGAAGCGCCTTCAGCAAACACTGTGGCTTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CAA 90 bp | AGTTGGGAGCTGCTGTGTGGATGCTGGAGATTGACCCTGGATTCCTaGGAAGAGCAGCTTGTGCTCCCAACAGGTCAGCCATCTTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SWELLCGCWRLTLDS*EEQLVLPTGQPSFQ Trigger: TTGAAAAGATGGCTGACCTGTTGGGAGCACAAGCTGCTCTTCCAAGGAATCCAGGGTCAATCTCCAGCATCCACACAGCAGCTCCCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR TCA 90 bp | GAGTTGGGAGCTGCTGTGTGGATGCTGGAGATTGACCCTGGATTCCTTGGAAGACTTGCAGGCTTCCTGTaGGAGCTTCCAATGATTTGC | + |
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Preference number: 2 (lower is better) Translates to: ELGAAVWMLEIDPGFLGRLAGFL*ELPMIC Trigger: GCAAATCATTGGAAGCTCTCACAGGAAGCCTGCAAG...TCTTCCAAGGAATCCAGGGTCAATCTCCAGCATCCACACAGCAGCTCCCAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR GCA 90 bp | ACTGGGGTCCAAGCTGGCCTGGAACTTGGAGCGATTCACTGGTGTCACCATTTGAAATCCACCTGCCTCTaGCACTTGAGTGTTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: TGVQAGLELGAIHWCHHLKSTCL*HLSVGI Trigger: AATCCCAACACTCAAGTGGCAGAGGCAGGTGGATTT...CAAATGGTGACACCAGTGAATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CAA 90 bp | TGGCCTGGAACTTGGAGCGATTCACTGGTGTCACCATTTGCAGTGTaGAGATTAAAGCTGTTGAGCCACCGTGCCCGACAAGGGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: WPGTWSDSLVSPFAV*RLKLLSHRARQGFC Trigger: ACAAAACCCTTGTCGGGCACGGTGGCTCAACAGCTTTAATCTCAACACTGCAAATGGTGACACCAGTGAATCGCTCCAAGTTCCAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CAA 90 bp | TGCTTTTGTGAGACGGTCTCACTGGGGTCCAAGCTGGCCTGGAACTaGGAGCGATTCACTGGTGTCACCATTTGCAGTGTTGAGATTAAA | + |
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Preference number: 2 (lower is better) Translates to: CFCETVSLGSKLAWN*ERFTGVTICSVEIK Trigger: TTTAATCTCAACACTGCAAATGGTGACACCAGTGAATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTGAGACCGTCTCACAAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR TCA 90 bp | GTCTGTCCATATAGCCTGACTGGCTTCAAACTGACAGAAATCTGTCTTGCTATGCCTGAAGTTGTCCTCTaGCCTCCACGTGTCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VCPYSLTGFKLTEICLAMPEVVL*PPRVCW Trigger: CCAGCAGACACGTGGAGGTCAGAGGACAACTTCAGG...CATAGCAAGACAGATTTCTGTCAGTTTGAAGCCAGTCAGGCTATATGGACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR CCA 90 bp | GCTTTTGTGAGACGGTCTCACTGGGGTCCAAGCTGGCCTGGAACTTGGAGCGATGTTTCATTCAAGTTCTaGCCTTTTACAGAGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: AFVRRSHWGPSWPGTWSDVSFKF*PFTEEN Trigger: GTTCTCCTCTGTAAAAGGCCAGAACTTGAATGAAAC...ATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTGAGACCGTCTCACAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGTTGAGATTAAAGCTGTTGAGCCACCGTGCCCGACAAGGGTTTTGTTGTTATACCACTTGCATACCTaGTCCCCATGGCGGCCACAA | + |
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Preference number: 2 (lower is better) Translates to: SVEIKAVEPPCPTRVLLLYHLHT*SPWRPQ Trigger: TTGTGGCCGCCATGGGGACCAGGTATGCAAGTGGTA...TAACAACAAAACCCTTGTCGGGCACGGTGGCTCAACAGCTTTAATCTCAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR CCA 90 bp | CTTCCATCTCTGTGGCTTCTGCCATCATCAGACTTGGTGGCAAGCACTTACACCCTTGGAGCGATTCACTaGTGTCACCATTTGCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LPSLWLLPSSDLVASTYTLGAIH*CHHLQC Trigger: ACACTGCAAATGGTGACACCAGTGAATCGCTCCAAG...GGTGTAAGTGCTTGCCACCAAGTCTGATGATGGCAGAAGCCACAGAGATGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR TCA 90 bp | GATGGTTCTATCAGAAACACTCTACAGCTGCCCTCGCTCACCTTAAAGCACCGAGGGAAGTCGGCACAATaGTGGTTTCATTTCTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: DGSIRNTLQLPSLTLKHRGKSAQ*WFHFSS Trigger: TGAGGAGAAATGAAACCATCATTGTGCCGACTTCCC...TCGGTGCTTTAAGGTGAGCGAGGGCAGCTGTAGAGTGTTTCTGATAGAACCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGGCTGCTCTCTTAACTGATTCCCGGGATGGTTCTATCAGAAACACTCTATTGGGAGCTGCTGTGTaGATGCTGGAGATTGACCCT | + |
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Preference number: 2 (lower is better) Translates to: QVAALLTDSRDGSIRNTLLGAAV*MLEIDP Trigger: AGGGTCAATCTCCAGCATCCACACAGCAGCTCCCAA...TAGAGTGTTTCTGATAGAACCATCCCGGGAATCAGTTAAGAGAGCAGCCACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CAA 90 bp | CTGACTGGCTTCAAACTGACAGAAATCTGTCTTGCTATGCCTTCTTaGGGGTGTCTGCATTATTTAAAGCTGGGGTCACAGCCTACCAGC | + |
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Preference number: 2 (lower is better) Translates to: LTGFKLTEICLAMPS*GCLHYLKLGSQPTS Trigger: GCTGGTAGGCTGTGACCCCAGCTTTAAATAATGCAGACACCCCAAAGAAGGCATAGCAAGACAGATTTCTGTCAGTTTGAAGCCAGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR GCA 90 bp | ATCAAAGCCACAGTGTTTGCTGAAGGCGCTTCTCCACTGGCAGCCTGTTGTCTCGTACAGGCTGAAGTGTaGATGTATGTTCTTTATTGT | + |
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Preference number: 2 (lower is better) Translates to: IKATVFAEGASPLAACCLVQAEV*MYVLYC Trigger: ACAATAAAGAACATACATGCACACTTCAGCCTGTAC...GAGACAACAGGCTGCCAGTGGAGAAGCGCCTTCAGCAAACACTGTGGCTTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CAA 90 bp | TTACAGAGGAGAACTTTTACAGAGTTTCCTAGGCAAGACCTTGCTTaGTGTGCACACTGCCTTCAGGTAGTGACATTTGGAGCTGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: LQRRTFTEFPRQDLA*CAHCLQVVTFGAGK Trigger: CTTACCAGCTCCAAATGTCACTACCTGAAGGCAGTGTGCACACAAAGCAAGGTCTTGCCTAGGAAACTCTGTAAAAGTTCTCCTCTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAGCCACAGTGTTTGCTGAAGGCGCTTCTCCACTGGCAGCCTGTTGTCTCCCTGAGTCATTTTGCTaGTCACACTTATATTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: IKATVFAEGASPLAACCLPESFC*SHLYFC Trigger: ACAAAAATATAAGTGTGACCAGCAAAATGACTCAGG...GAGACAACAGGCTGCCAGTGGAGAAGCGCCTTCAGCAAACACTGTGGCTTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR GCA 90 bp | GTCTGTCCATATAGCCTGACTGGCTTCAAACTGACAGAAATCTGTCTTGCTATGGAGCTTCCAATGATTTaGAGGTCAATGTGGTGGACA | + |
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Preference number: 2 (lower is better) Translates to: VCPYSLTGFKLTEICLAMELPMI*RSMWWT Trigger: TGTCCACCACATTGACCTGCAAATCATTGGAAGCTC...CATAGCAAGACAGATTTCTGTCAGTTTGAAGCCAGTCAGGCTATATGGACAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CAA 90 bp | AGTGTTGAGATTAAAGCTGTTGAGCCACCGTGCCCGACAAGGGTTTaGTTGTTAATGTTAATGGGTGTTCAGCCTACATATCTGTATGTC | + |
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Preference number: 2 (lower is better) Translates to: SVEIKAVEPPCPTRV*LLMLMGVQPTYLYV Trigger: GACATACAGATATGTAGGCTGAACACCCATTAACATTAACAACAAAACCCTTGTCGGGCACGGTGGCTCAACAGCTTTAATCTCAACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR TCA 90 bp | AAGAACTACTACCCATCTATAGGTATCAGAATGCCAGTGACAACTGCTTTTATTGTGGATGCTGGAGATTaGCCCTGGATTCCTTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: KNYYPSIGIRMPVTTAFIVDAGD*PWIPWK Trigger: CTTCCAAGGAATCCAGGGTCAATCTCCAGCATCCAC...AATAAAAGCAGTTGTCACTGGCATTCTGATACCTATAGATGGGTAGTAGTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGGCTGCTCTCTTAACTGATTCCCGGGATGGTTCTATCAGAAACACTCTACTTAAAGCACCGAGGTaGGCAATAAATATCAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: QVAALLTDSRDGSIRNTLLKAPR*AINISE Trigger: TTCACTGATATTTATTGCTCACCTCGGTGCTTTAAG...TAGAGTGTTTCTGATAGAACCATCCCGGGAATCAGTTAAGAGAGCAGCCACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CAA 90 bp | GTTGAGATTAAAGCTGTTGAGCCACCGTGCCCGACAAGGGTTTTGTaGTTAATGTTAATGGGTGTTCAGCCTACATATCTGTATGTCTAT | + |
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Preference number: 2 (lower is better) Translates to: VEIKAVEPPCPTRVL*LMLMGVQPTYLYVY Trigger: ATAGACATACAGATATGTAGGCTGAACACCCATTAACATTAACAACAAAACCCTTGTCGGGCACGGTGGCTCAACAGCTTTAATCTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR GCA 90 bp | AAGAACTACTACCCATCTATAGGTATCAGAATGCCAGTGACAACTGCTTTTATTGAAGATGGACAGACTTaGAGGCTTCCTGTGAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: KNYYPSIGIRMPVTTAFIEDGQT*RLPVRA Trigger: AGCTCTCACAGGAAGCCTGCAAGTCTGTCCATCTTC...AATAAAAGCAGTTGTCACTGGCATTCTGATACCTATAGATGGGTAGTAGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR-3UTR GCA 90 bp | TTGAGCAGCATTTCTCTATTTAACAGCCCTGACTTTCCTGGAACTTACTCTGTACCAAGATTTTGTTCCTaGTTTTGTGAGACGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: LSSISLFNSPDFPGTYSVPRFCS*FCETVS Trigger: TGAGACCGTCTCACAAAAGCAGGAACAAAATCTTGG...TACAGAGTAAGTTCCAGGAAAGTCAGGGCTGTTAAATAGAGAAATGCTGCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CAA 90 bp | AAGTACATGTTCCACATTGTTCTATTCATAAATAAGCTCAGTTCTTaGCAAATGATGGGGGTTACCCACACGATAAGGGACAGAAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: KYMFHIVLFINKLSS*QMMGVTHTIRDRKV Trigger: CACTTTTCTGTCCCTTATCGTGTGGGTAACCCCCATCATTTGCAAAGAACTGAGCTTATTTATGAATAGAACAATGTGGAACATGTACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CCA 72 bp | TCAAAGCCACAGTGTTTGCTGAAGGCGCTTCTCCACTaGCAGCCTGTTGTCTCGAGGCCGGCACACATGGGT | + |
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Preference number: 3 (lower is better) Translates to: SKPQCLLKALLH*QPVVSRPAHMG Trigger: ACCCATGTGTGCCGGCCTCGAGACAACAGGCTGCCAGTGGAGAAGCGCCTTCAGCAAACACTGTGGCTTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CCA 72 bp | CCTGCTTTTGTGAGACGGTCTCACTGGGGTCCAAGCTaGCCTGGAACTTGGAGCGATTCACTGGTGTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: PAFVRRSHWGPS*PGTWSDSLVSP Trigger: TGGTGACACCAGTGAATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTGAGACCGTCTCACAAAAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR TCA 72 bp | TGTCTCCTGACTACCACCCCTCCCGATGCTGTTAGCTaGAGATGGACAGACTTGCAGGCTTCCTGTGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CLLTTTPPDAVS*RWTDLQASCES Trigger: GCTCTCACAGGAAGCCTGCAAGTCTGTCCATCTTCAGCTAACAGCATCGGGAGGGGTGGTAGTCAGGAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR CCA 72 bp | TGTATGTCTATGTACCACTTGCATACCTGGTCCCCATaGCGGCCACAAGAGGGCATCAGGTTCCCTGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: CMSMYHLHTWSP*RPQEGIRFPGT Trigger: AGTCCCAGGGAACCTGATGCCCTCTTGTGGCCGCCATGGGGACCAGGTATGCAAGTGGTACATAGACATACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR CCA 72 bp | AGACGGTCTCACTGGGGTCCAAGCTGGCCTGGAACTTaGAGCGATTCACTGGTGTCACCATTTGCAGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RRSHWGPSWPGT*SDSLVSPFAVL Trigger: CAACACTGCAAATGGTGACACCAGTGAATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTGAGACCGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR CCA 72 bp | TTTTGTGAGACGGTCTCACTGGGGTCCAAGCTGGCCTaGAACTTGGAGCGATTCACTGGTGTCACCATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FCETVSLGSKLA*NLERFTGVTIC Trigger: GCAAATGGTGACACCAGTGAATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTGAGACCGTCTCACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR TCA 72 bp | GCTAGGAGATTTAAGCGCAGAGTTCTGCTGAAGCTGTaGTTCCTCAGGCTGGGACCTGACATGTACAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ARRFKRRVLLKL*FLRLGPDMYRL Trigger: CAGCCTGTACATGTCAGGTCCCAGCCTGAGGAATCACAGCTTCAGCAGAACTCTGCGCTTAAATCTCCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR GCA 72 bp | CCCCTCCCGATGCTGTTAGCTGAAGATGGACAGACTTaGAGGCTTCCTGTGAGAGCTTCCAATGATTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PLPMLLAEDGQT*RLPVRASNDLQ Trigger: CTGCAAATCATTGGAAGCTCTCACAGGAAGCCTGCAAGTCTGTCCATCTTCAGCTAACAGCATCGGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTGGGAGCTGCTGTGTGGATGCTGGAGATTGACCCTGGATTCCTTGGAAGACTCCTCAGAGAAAAGTaGGAATACTCTGGAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ELGAAVWMLEIDPGFLGRLLREK*EYSGKA Trigger: GGCCTTTCCAGAGTATTCCAACTTTTCTCTGAGGAG...TCTTCCAAGGAATCCAGGGTCAATCTCCAGCATCCACACAGCAGCTCCCAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR GCA 72 bp | GCCTGGAACTTGGAGCGATTCACTGGTGTCACCATTTaGAGTGTTGAGATTAAAGCTGTTGAGCCACCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: AWNLERFTGVTI*SVEIKAVEPPC Trigger: GCACGGTGGCTCAACAGCTTTAATCTCAACACTGCAAATGGTGACACCAGTGAATCGCTCCAAGTTCCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR CCA 72 bp | TCCCTGGGACTAGAATTAGAGTTGGGAGCTGCTGTGTaGATGCTGGAGATTGACCCTGGATTCCTTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLGLELELGAAV*MLEIDPGFLGR Trigger: TCTTCCAAGGAATCCAGGGTCAATCTCCAGCATCCACACAGCAGCTCCCAACTCTAATTCTAGTCCCAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR CCA 72 bp | CAAGATTTTGTTCCTGCTTTTGTGAGACGGTCTCACTaGGGTCCAAGCTGGCCTGGAACTTGGAGCGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: QDFVPAFVRRSH*GPSWPGTWSDS Trigger: TGAATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTGAGACCGTCTCACAAAAGCAGGAACAAAATCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCATCTCTGTGGCTTCTGCCATCATCAGACTTGGTGGCAAGCACTTACACCAGAGCTTCCAATGATTaGCAGGTCAATGTGGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LPSLWLLPSSDLVASTYTRASND*QVNVVD Trigger: GTCCACCACATTGACCTGCAAATCATTGGAAGCTCT...GGTGTAAGTGCTTGCCACCAAGTCTGATGATGGCAGAAGCCACAGAGATGGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGGCTGCTCTCTTAACTGATTCCCGGGATGGTTCTATCAGAAACACTCTATTCCTAGGCAAGACCTaGCTTTGTGTGCACACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QVAALLTDSRDGSIRNTLFLGKT*LCVHTA Trigger: GGCAGTGTGCACACAAAGCAAGGTCTTGCCTAGGAA...TAGAGTGTTTCTGATAGAACCATCCCGGGAATCAGTTAAGAGAGCAGCCACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR TCA 72 bp | TGGGTCTTTCAGCACCCAAGTGGCTGCTCTCTTAACTaGTTCCCGGGATGGTTCTATCAGAAACACTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: WVFQHPSGCSLN*FPGWFYQKHST Trigger: TGTAGAGTGTTTCTGATAGAACCATCCCGGGAATCAGTTAAGAGAGCAGCCACTTGGGTGCTGAAAGACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR TCA 72 bp | TTAATCCCAGCACTTGAGAGGCAGAGGCAGAAGGGTTaGTATAAGTTCCAGGCCATCTTGGGCTACAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: LIPALERQRQKG*YKFQAILGYRM Trigger: CATTCTGTAGCCCAAGATGGCCTGGAACTTATATCAACCCTTCTGCCTCTGCCTCTCAAGTGCTGGGATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGGCTGCTCTCTTAACTGATTCCCGGGATGGTTCTATCAGAAACACTCTATTGAGATTAAAGCTGTaGAGCCACCGTGCCCGACAA | + |
|
Preference number: 3 (lower is better) Translates to: QVAALLTDSRDGSIRNTLLRLKL*SHRARQ Trigger: TTGTCGGGCACGGTGGCTCAACAGCTTTAATCTCAA...TAGAGTGTTTCTGATAGAACCATCCCGGGAATCAGTTAAGAGAGCAGCCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGGCTGCTCTCTTAACTGATTCCCGGGATGGTTCTATCAGAAACACTCTACTGGGTTTTGTGGTTTaGAGACAGTCTCATTATGTA | + |
|
Preference number: 3 (lower is better) Translates to: QVAALLTDSRDGSIRNTLLGFVV*RQSHYV Trigger: TACATAATGAGACTGTCTCAAAACCACAAAACCCAG...TAGAGTGTTTCTGATAGAACCATCCCGGGAATCAGTTAAGAGAGCAGCCACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR GCA 72 bp | ATTTGCAGTGTTGAGATTAAAGCTGTTGAGCCACCGTaGCCGACAAGGGTTTTGTTGTTAATGTTAATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ICSVEIKAVEPP*PTRVLLLMLMG Trigger: ACCCATTAACATTAACAACAAAACCCTTGTCGGGCACGGTGGCTCAACAGCTTTAATCTCAACACTGCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGAACTACTACCCATCTATAGGTATCAGAATGCCAGTGACAACTGCTTTTATTGGACTAGAATTAGAGTaGGGAGCTGCTGTGTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: KNYYPSIGIRMPVTTAFIGLELE*GAAVWM Trigger: CATCCACACAGCAGCTCCCAACTCTAATTCTAGTCC...AATAAAAGCAGTTGTCACTGGCATTCTGATACCTATAGATGGGTAGTAGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR CCA 72 bp | ATAGCTACTTATCCCTTAGCCTTCACAGCTATGCAGTaGGAGACACTAGAGAACTTTTATTCTAAGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: IATYPLAFTAMQ*ETLENFYSKPH Trigger: ATGAGGCTTAGAATAAAAGTTCTCTAGTGTCTCCCACTGCATAGCTGTGAAGGCTAAGGGATAAGTAGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR TCA 72 bp | TTTATTGTCATGGGATTAGTAGGGAAGTCGGCACAATaGTGGTTTCATTTCTCCTCAGAGAAAAGTTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FIVMGLVGKSAQ*WFHFSSEKSWN Trigger: ATTCCAACTTTTCTCTGAGGAGAAATGAAACCATCATTGTGCCGACTTCCCTACTAATCCCATGACAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR CAA 72 bp | AAGACCCGGGTGGGGGTCGAAGGCACACTCCTGAAGTaGTCCTCTGACCTCCACGTGTCTGCTGGGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTRVGVEGTLLK*SSDLHVSAGAH Trigger: ATGGGCCCCAGCAGACACGTGGAGGTCAGAGGACAACTTCAGGAGTGTGCCTTCGACCCCCACCCGGGTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR TCA 90 bp | GAGTTGGGAGCTGCTGTGTGGATGCTGGAGATTGACCCTGGATTCCTTGGAAGACCAGTGCTCTCCAGTTaGGCTCTTGGCCAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELGAAVWMLEIDPGFLGRPVLSS*ALGQWP Trigger: TGGCCATTGGCCAAGAGCTCAACTGGAGAGCACTGG...TCTTCCAAGGAATCCAGGGTCAATCTCCAGCATCCACACAGCAGCTCCCAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR GCA 90 bp | TGTCATGGGATTAGTAGGGAAGTCGGCACAATGATGGTTTCATTTCTCCTCAGAGAGGCCCCACCAGGTTaGCTGCTGCCGCCGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CHGISREVGTMMVSFLLREAPPG*LLPPQP Trigger: TGGCTGCGGCGGCAGCAGGCAACCTGGTGGGGCCTC...TCTGAGGAGAAATGAAACCATCATTGTGCCGACTTCCCTACTAATCCCATGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR CAA 72 bp | GAGACGGTCTCACTGGGGTCCAAGCTGGCCTGGAACTaGGAGCGATTCACTGGTGTCACCATTTGCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ETVSLGSKLAWN*ERFTGVTICSV Trigger: AACACTGCAAATGGTGACACCAGTGAATCGCTCCAAGTTCCAGGCCAGCTTGGACCCCAGTGAGACCGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR CCA 90 bp | GAGTTGGGAGCTGCTGTGTGGATGCTGGAGATTGACCCTGGATTCCTTGGAAGACTCCAGTTGAGCTCTTaGCCAATGGCCAGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELGAAVWMLEIDPGFLGRLQLSS*PMASTA Trigger: AGCTGTGCTGGCCATTGGCCAAGAGCTCAACTGGAG...TCTTCCAAGGAATCCAGGGTCAATCTCCAGCATCCACACAGCAGCTCCCAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR CCA 90 bp | CTTCCATCTCTGTGGCTTCTGCCATCATCAGACTTGGTGGCAAGCACTTACACCTGGAACCTCTGCGCTTaGTACAGCGCACGCTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSLWLLPSSDLVASTYTWNLCA*YSARSR Trigger: TCGTGAGCGTGCGCTGTACCAAGCGCAGAGGTTCCA...GGTGTAAGTGCTTGCCACCAAGTCTGATGATGGCAGAAGCCACAGAGATGGAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGGACTAGAATTAGAGTTGGGAGCTGCTGTGTGGATGCTGGAGATTGACTCTCCCCAAAATGTGTaGCCATGCCTGCCAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLGLELELGAAVWMLEIDSPQNV*PCLPAH Trigger: GTGTGCTGGCAGGCATGGCCACACATTTTGGGGAGA...GTCAATCTCCAGCATCCACACAGCAGCTCCCAACTCTAATTCTAGTCCCAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR CAA 72 bp | AAGAGGGCATCAGGTTCCCTGGGACTAGAATTAGAGTaGGGAGCTGCTGTGTGGATGCTGGAGATTGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRASGSLGLELE*GAAVWMLEIDP Trigger: AGGGTCAATCTCCAGCATCCACACAGCAGCTCCCAACTCTAATTCTAGTCCCAGGGAACCTGATGCCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR TCA 90 bp | AGTGTTGAGATTAAAGCTGTTGAGCCACCGTGCCCGACAAGGGTTTTGTTGTTACTTCCAGCCAGTGGATaGAGCACCATGCAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVEIKAVEPPCPTRVLLLLPASG*STMQVG Trigger: CCCCACCTGCATGGTGCTTCATCCACTGGCTGGAAG...TAACAACAAAACCCTTGTCGGGCACGGTGGCTCAACAGCTTTAATCTCAACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR GCA 90 bp | CAAGTGGCTGCTCTCTTAACTGATTCCCGGGATGGTTCTATCAGAAACACTCTACACAGGTGGAACCTCTaGGCTTGGTACAGCGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: QVAALLTDSRDGSIRNTLHRWNL*AWYSAR Trigger: GCGTGCGCTGTACCAAGCGCAGAGGTTCCACCTGTG...TAGAGTGTTTCTGATAGAACCATCCCGGGAATCAGTTAAGAGAGCAGCCACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR CCA 90 bp | GTCTGTCCATATAGCCTGACTGGCTTCAAACTGACAGAAATCTGTCTTGCTATGCCATCCACCCGGGACTaGAATCCCCCAGTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCPYSLTGFKLTEICLAMPSTRD*NPPVLS Trigger: GGAGAGCACTGGGGGATTCCAGTCCCGGGTGGATGG...CATAGCAAGACAGATTTCTGTCAGTTTGAAGCCAGTCAGGCTATATGGACAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR TCA 90 bp | CTTCCATCTCTGTGGCTTCTGCCATCATCAGACTTGGTGGCAAGCACTTACACCAGTGTTGCTTCCAGTTaGGAACCAAGCAGAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLWLLPSSDLVASTYTSVASS*EPSREL Trigger: GAGCTCTCTGCTTGGTTCTCAACTGGAAGCAACACT...GGTGTAAGTGCTTGCCACCAAGTCTGATGATGGCAGAAGCCACAGAGATGGAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGAGATTAAAGCTGTTGAGCCACCGTGCCCGACAAGGGTTTTGTTGTTAGGTTCCACTCTCCCATaGCCTCCATGCGGTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SVEIKAVEPPCPTRVLLLGSTLP*PPCGPQ Trigger: TTGTGGACCGCATGGAGGCCATGGGAGAGTGGAACC...TAACAACAAAACCCTTGTCGGGCACGGTGGCTCAACAGCTTTAATCTCAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGGACTAGAATTAGAGTTGGGAGCTGCTGTGTGGATGCTGGAGATTGACGATCTCCTTGACATTTaGGTTCCACTCTCCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGLELELGAAVWMLEIDDLLDI*VPLSHG Trigger: GCCATGGGAGAGTGGAACCCAAATGTCAAGGAGATC...GTCAATCTCCAGCATCCACACAGCAGCTCCCAACTCTAATTCTAGTCCCAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR GCA 90 bp | ATCAAAGCCACAGTGTTTGCTGAAGGCGCTTCTCCACTGGCAGCCTGTTGTCTCTCTTTTCCAATCCTCTaGAGGACCTTGATCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKATVFAEGASPLAACCLSFPIL*RTLISL Trigger: CAAGGAGATCAAGGTCCTGCAGAGGATTGGAAAAGA...GAGACAACAGGCTGCCAGTGGAGAAGCGCCTTCAGCAAACACTGTGGCTTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR CCA 90 bp | TGTCATGGGATTAGTAGGGAAGTCGGCACAATGATGGTTTCATTTCTCCTCAGAAGGCGCTTGCGCAGGTaGTTGGCGAACTCTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CHGISREVGTMMVSFLLRRRLRR*LANSIW Trigger: CCAGATAGAGTTCGCCAACCACCTGCGCAAGCGCCT...TCTGAGGAGAAATGAAACCATCATTGTGCCGACTTCCCTACTAATCCCATGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR CAA 72 bp | ACTTGGAGCGATTCACTGGTGTCACCATTTGCAGTGTaGAGATTAAAGCTGTTGAGCCACCGTGCCCGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TWSDSLVSPFAV*RLKLLSHRARQ Trigger: TTGTCGGGCACGGTGGCTCAACAGCTTTAATCTCAACACTGCAAATGGTGACACCAGTGAATCGCTCCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR TCA 90 bp | CAAGTGGCTGCTCTCTTAACTGATTCCCGGGATGGTTCTATCAGAAACACTCTAAGCCTTCCTGGTTGTTaGGTATGCCCAAGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVAALLTDSRDGSIRNTLSLPGC*VCPRPS Trigger: AGAAGGCCTTGGGCATACTCAACAACCAGGAAGGCT...TAGAGTGTTTCTGATAGAACCATCCCGGGAATCAGTTAAGAGAGCAGCCACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGAACTTTTACAGAGTTTCCTAGGCAAGACCTTGCTTTGTGTGCACACTGCCGCAGCCAGCTCATaGGTGATGACCGTGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGELLQSFLGKTLLCVHTAAASS*VMTVSF Trigger: AAAAGACACGGTCATCACTCATGAGCTGGCTGCGGC...AGTGTGCACACAAAGCAAGGTCTTGCCTAGGAAACTCTGTAAAAGTTCTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGAACTTTTACAGAGTTTCCTAGGCAAGACCTTGCTTTGTGTGCACACTGTCTGCGATAGGACCTaGTTGATGATTGTCTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGELLQSFLGKTLLCVHTVCDRT*LMIVFG Trigger: GCCGAAGACAATCATCAACCAGGTCCTATCGCAGAC...AGTGTGCACACAAAGCAAGGTCTTGCCTAGGAAACTCTGTAAAAGTTCTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR GCA 90 bp | CAAGTGGCTGCTCTCTTAACTGATTCCCGGGATGGTTCTATCAGAAACACTCTAGCCAGCACAGCTTGGTaGCTTAATCCTTTCATATTC | + |
|
Preference number: 4 (lower is better) Translates to: QVAALLTDSRDGSIRNTLASTAW*LNPFIF Trigger: GAATATGAAAGGATTAAGGCACCAAGCTGTGCTGGC...TAGAGTGTTTCTGATAGAACCATCCCGGGAATCAGTTAAGAGAGCAGCCACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR GCA 90 bp | TTGAGCAGCATTTCTCTATTTAACAGCCCTGACTTTCCTGGAACTTACTCTGTACCAAGCGAAACACCTTaGCCACATCTGGCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSISLFNSPDFPGTYSVPSETP*PHLAPS Trigger: AGATGGTGCCAGATGTGGGCAAGGTGTTTCGCTTGG...TACAGAGTAAGTTCCAGGAAAGTCAGGGCTGTTAAATAGAGAAATGCTGCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR CCA 90 bp | GTCTGTCCATATAGCCTGACTGGCTTCAAACTGACAGAAATCTGTCTTGCTATGTTCTTCCAGCCTTCCTaGTTGTTGAGTATGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCPYSLTGFKLTEICLAMFFQPS*LLSMPK Trigger: CTTGGGCATACTCAACAACCAGGAAGGCTGGAAGAA...CATAGCAAGACAGATTTCTGTCAGTTTGAAGCCAGTCAGGCTATATGGACAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR CAA 72 bp | AAAGCTGTTGAGCCACCGTGCCCGACAAGGGTTTTGTaGTTAATGTTAATGGGTGTTCAGCCTACATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAVEPPCPTRVL*LMLMGVQPTYL Trigger: CAGATATGTAGGCTGAACACCCATTAACATTAACAACAAAACCCTTGTCGGGCACGGTGGCTCAACAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR CAA 72 bp | CATAACCATGCCCAGGTCTCCTGTCTACCTACGTGTTaGTGTACCTGGCTTTCCTGCATTAGAAGTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HNHAQVSCLPTC*CTWLSCIRSYQ Trigger: TTGATAACTTCTAATGCAGGAAAGCCAGGTACACAAACACGTAGGTAGACAGGAGACCTGGGCATGGTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR CCA 90 bp | ACCGTGCCCGACAAGGGTTTTGTTGTTAATGTTAATGGGTGTTCAGCCTACATAATGGCCAGCACAGCTTaGTGCCTTAATCCTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TVPDKGFVVNVNGCSAYIMASTA*CLNPFI Trigger: TATGAAAGGATTAAGGCACCAAGCTGTGCTGGCCAT...TATGTAGGCTGAACACCCATTAACATTAACAACAAAACCCTTGTCGGGCACGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| CDS-3UTR CCA 90 bp | AAGAACTACTACCCATCTATAGGTATCAGAATGCCAGTGACAACTGCTTTTATTGCTTGCGCAGGTGGTTaGCGAACTCTATCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNYYPSIGIRMPVTTAFIACAGG*RTLSGS Trigger: AGACCCAGATAGAGTTCGCCAACCACCTGCGCAAGC...AATAAAAGCAGTTGTCACTGGCATTCTGATACCTATAGATGGGTAGTAGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
||
| 3UTR CAA 72 bp | AGAACTTTTACAGAGTTTCCTAGGCAAGACCTTGCTTaGTGTGCACACTGCCTTCAGGTAGTGACATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTFTEFPRQDLA*CAHCLQVVTFG Trigger: TCCAAATGTCACTACCTGAAGGCAGTGTGCACACAAAGCAAGGTCTTGCCTAGGAAACTCTGTAAAAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CAA 72 bp | TTCAAACTGACAGAAATCTGTCTTGCTATGCCTTCTTaGGGGTGTCTGCATTATTTAAAGCTGGGGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: FKLTEICLAMPS*GCLHYLKLGSQ Trigger: CTGTGACCCCAGCTTTAAATAATGCAGACACCCCAAAGAAGGCATAGCAAGACAGATTTCTGTCAGTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CAA 72 bp | TTCCACATTGTTCTATTCATAAATAAGCTCAGTTCTTaGCAAATGATGGGGGTTACCCACACGATAAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: FHIVLFINKLSS*QMMGVTHTIRD Trigger: GTCCCTTATCGTGTGGGTAACCCCCATCATTTGCAAAGAACTGAGCTTATTTATGAATAGAACAATGTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| 3UTR CAA 72 bp | TTCATGCTTAGAATGAAAAGCTTTCGGTTGTTAGAATaGTTCATCCTTAACACATTCGGAAAGGAATTCCAA | + |
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Preference number: 4 (lower is better) Translates to: FMLRMKSFRLLE*FILNTFGKEFQ Trigger: TTGGAATTCCTTTCCGAATGTGTTAAGGATGAACAATTCTAACAACCGAAAGCTTTTCATTCTAAGCATGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS-3UTR CAA 90 bp | ATCAAAGCCACAGTGTTTGCTGAAGGCGCTTCTCCACTGGCAGCCTGTTGTCTCCGAGGCCCCACCAGGTaGCCTGCTGCCGCCGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: IKATVFAEGASPLAACCLRGPTR*PAAAAA Trigger: GGCTGCGGCGGCAGCAGGCAACCTGGTGGGGCCTCG...GAGACAACAGGCTGCCAGTGGAGAAGCGCCTTCAGCAAACACTGTGGCTTTGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS-3UTR CAA 90 bp | TCCCTGGGACTAGAATTAGAGTTGGGAGCTGCTGTGTGGATGCTGGAGATTGACGTGGAACCTCTGCGCTaGGTACAGCGCACGCTCACG | + |
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Preference number: 5 (lower is better) Translates to: SLGLELELGAAVWMLEIDVEPLR*VQRTLT Trigger: CGTGAGCGTGCGCTGTACCAAGCGCAGAGGTTCCAC...GTCAATCTCCAGCATCCACACAGCAGCTCCCAACTCTAATTCTAGTCCCAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS-3UTR CAA 90 bp | ACACTAATCCAATCAAAGCCACAGTGTTTGCTGAAGGCGCTTCTCCACTGGCAGCCCAGTGCTCTCCAGTaGAGCTCTTGGCCAATGGCC | + |
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Preference number: 5 (lower is better) Translates to: TLIQSKPQCLLKALLHWQPSALQ*SSWPMA Trigger: GGCCATTGGCCAAGAGCTCAACTGGAGAGCACTGGG...CTGCCAGTGGAGAAGCGCCTTCAGCAAACACTGTGGCTTTGATTGGATTAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS-3UTR CAA 90 bp | ATCAAAGCCACAGTGTTTGCTGAAGGCGCTTCTCCACTGGCAGCCTGTTGTCTCCAGCCTTCCTGGTTGTaGAGTATGCCCAAGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: IKATVFAEGASPLAACCLQPSWL*SMPKAF Trigger: GAAGGCCTTGGGCATACTCAACAACCAGGAAGGCTG...GAGACAACAGGCTGCCAGTGGAGAAGCGCCTTCAGCAAACACTGTGGCTTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS-3UTR CAA 90 bp | ATCAAAGCCACAGTGTTTGCTGAAGGCGCTTCTCCACTGGCAGCCTGTTGTCTCTGCGATAGGACCTGGTaGATGATTGTCTTCGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: IKATVFAEGASPLAACCLCDRTW*MIVFGS Trigger: GCTGCCGAAGACAATCATCAACCAGGTCCTATCGCA...GAGACAACAGGCTGCCAGTGGAGAAGCGCCTTCAGCAAACACTGTGGCTTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS CCA 90 bp | CGTGTCTTTTCCAATCCTCTGCAGGACCTTGATCTCCTTGACATTTaGGTTCCACTCTCCCATGGCCTCCATGCGGTCCACAAGTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RVFSNPLQDLDLLDI*VPLSHGLHAVHKFF Trigger: GAAGAACTTGTGGACCGCATGGAGGCCATGGGAGAGTGGAACCCAAATGTCAAGGAGATCAAGGTCCTGCAGAGGATTGGAAAAGACACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS-3UTR CAA 90 bp | CAAGTGGCTGCTCTCTTAACTGATTCCCGGGATGGTTCTATCAGAAACACTCTATCTCCAGTTGAGCTCTaGGCCAATGGCCAGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: QVAALLTDSRDGSIRNTLSPVEL*ANGQHS Trigger: GCTGTGCTGGCCATTGGCCAAGAGCTCAACTGGAGA...TAGAGTGTTTCTGATAGAACCATCCCGGGAATCAGTTAAGAGAGCAGCCACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS-3UTR CAA 90 bp | TCCCTGGGACTAGAATTAGAGTTGGGAGCTGCTGTGTGGATGCTGGAGATTGACGAGTGTTGCTTCCAGTaGAGAACCAAGCAGAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: SLGLELELGAAVWMLEIDECCFQ*RTKQRA Trigger: AGCTCTCTGCTTGGTTCTCAACTGGAAGCAACACTC...GTCAATCTCCAGCATCCACACAGCAGCTCCCAACTCTAATTCTAGTCCCAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS-3UTR CAA 90 bp | GAGTTGGGAGCTGCTGTGTGGATGCTGGAGATTGACCCTGGATTCCTTGGAAGAAGGACCTTGATCTCCTaGACATTTGGGTTCCACTCT | + |
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Preference number: 5 (lower is better) Translates to: ELGAAVWMLEIDPGFLGRRTLIS*TFGFHS Trigger: AGAGTGGAACCCAAATGTCAAGGAGATCAAGGTCCT...TCTTCCAAGGAATCCAGGGTCAATCTCCAGCATCCACACAGCAGCTCCCAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS-3UTR CAA 90 bp | GTCTGTCCATATAGCCTGACTGGCTTCAAACTGACAGAAATCTGTCTTGCTATGTCCAAGCGAAACACCTaGCCCACATCTGGCACCATC | + |
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Preference number: 5 (lower is better) Translates to: VCPYSLTGFKLTEICLAMSKRNT*PTSGTI Trigger: GATGGTGCCAGATGTGGGCAAGGTGTTTCGCTTGGA...CATAGCAAGACAGATTTCTGTCAGTTTGAAGCCAGTCAGGCTATATGGACAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS-3UTR CAA 90 bp | TGTCATGGGATTAGTAGGGAAGTCGGCACAATGATGGTTTCATTTCTCCTCAGAATCCTCTGCAGGACCTaGATCTCCTTGACATTTGGG | + |
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Preference number: 5 (lower is better) Translates to: CHGISREVGTMMVSFLLRILCRT*ISLTFG Trigger: CCCAAATGTCAAGGAGATCAAGGTCCTGCAGAGGAT...TCTGAGGAGAAATGAAACCATCATTGTGCCGACTTCCCTACTAATCCCATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS-3UTR CAA 90 bp | AAGAACTACTACCCATCTATAGGTATCAGAATGCCAGTGACAACTGCTTTTATTCGCTTGCGCAGGTGGTaGGCGAACTCTATCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: KNYYPSIGIRMPVTTAFIRLRRW*ANSIWV Trigger: GACCCAGATAGAGTTCGCCAACCACCTGCGCAAGCG...AATAAAAGCAGTTGTCACTGGCATTCTGATACCTATAGATGGGTAGTAGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS CAA 72 bp | CAGTTGAGAACCAAGCAGAGAGCTCCGACGTCGAACTaGACCCATCCACCCGGGACTGGAATCCCCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: QLRTKQRAPTSN*THPPGTGIPQC Trigger: GCACTGGGGGATTCCAGTCCCGGGTGGATGGGTCAAGTTCGACGTCGGAGCTCTCTGCTTGGTTCTCAACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033979.6 ENSMUST00000210565.2 |
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| CDS CCA 72 bp | GGACTGGAATCCCCCAGTGCTCTCCAGTTGAGCTCTTaGCCAATGGCCAGCACAGCTTGGTGCCTTAATCCT | + |
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Preference number: 6 (lower is better) Translates to: GLESPSALQLSS*PMASTAWCLNP Trigger: AGGATTAAGGCACCAAGCTGTGCTGGCCATTGGCCAAGAGCTCAACTGGAGAGCACTGGGGGATTCCAGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033979.6 ENSMUST00000210565.2 |
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| CDS CCA 72 bp | TCCAATCCTCTGCAGGACCTTGATCTCCTTGACATTTaGGTTCCACTCTCCCATGGCCTCCATGCGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SNPLQDLDLLDI*VPLSHGLHAVH Trigger: GTGGACCGCATGGAGGCCATGGGAGAGTGGAACCCAAATGTCAAGGAGATCAAGGTCCTGCAGAGGATTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033979.6 |
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| CDS GCA 72 bp | TGGGCTGGTCTACCACCACCTCCAAGCGAAACACCTTaGCCACATCTGGCACCATCTTACTTAGCACTTCGT | + |
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Preference number: 6 (lower is better) Translates to: WAGLPPPPSETP*PHLAPSYLALR Trigger: ACGAAGTGCTAAGTAAGATGGTGCCAGATGTGGGCAAGGTGTTTCGCTTGGAGGTGGTGGTAGACCAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033979.6 ENSMUST00000210565.2 |
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| CDS CCA 72 bp | CCATGCGGTCCACAAGTTCTTCATAGAGTCTGTCCATaGGCTGGTCTACCACCACCTCCAAGCGAAACACCT | + |
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Preference number: 6 (lower is better) Translates to: PCGPQVLHRVCP*AGLPPPPSETP Trigger: AGGTGTTTCGCTTGGAGGTGGTGGTAGACCAGCCCATGGACAGACTCTATGAAGAACTTGTGGACCGCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033979.6 ENSMUST00000210565.2 |
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