Pregenerated sensors for STAMBPL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024776Ensembl transcript IDs: ENSMUST00000054956.15, ENSMUST00000119603.2, ENSMUST00000129535.8, ENSMUST00000239240.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACTGCTGCTGGCGCATCTaGGCTATCCGCTGGCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNCCWRI*AIRWRS Trigger: AGAGCGCCAGCGGATAGCTCAGATGCGCCAGCAGCA...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR TCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACAACACCGGAGAGTCCTaGCCTCGAATCTGGCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNNTGES*PRIWPR Trigger: TCGAGGCCAGATTCGAGGTCAGGACTCTCCGGTGTT...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR GCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACCACACTGGACAGGAATaGCGTTTGCGTGGGGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNHTGQE*RLRGVC Trigger: ACACACCCCACGCAAACGGCATTCCTGTCCAGTGTG...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACAGTTGCTCTGGTGGGTaGAAAAGCAGGACAGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNSCSGG*KSRTAH Trigger: GTGCGCTGTCCTGCTTTTCCACCCACCAGAGCAACT...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TCAGTCACTTCTGAAAACATCATAAGAAATTCGGCAGTCACACACGTCCACAGAGAACAGCACTCAGGGTaGCTGCTGGCTTTAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SVTSENIIRNSAVTHVHREQHSG*LLALGP Trigger: GGGCCCTAAAGCCAGCAGCCACCCTGAGTGCTGTTC...TCTGTGGACGTGTGTGACTGCCGAATTTCTTATGATGTTTTCAGAAGTGACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACACAGCTTGGGGTCCTTaGTGTGAGGATGGAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNTAWGP*CEDGSP Trigger: AGGGCTTCCATCCTCACACCAAGGACCCCAAGCTGT...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR TCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACGGATCCATCCCAGTGTaGGGAGACCATGTTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNGSIPV*GDHVDP Trigger: AGGATCAACATGGTCTCCTCACACTGGGATGGATCC...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACCTCAGAGAGTTGCTCTaGTGGGTGGAAAAGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNLRELL*WVEKQD Trigger: GTCCTGCTTTTCCACCCACCAGAGCAACTCTCTGAG...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACCACATCGCAATAGTCTaGGCCAGCAGACTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNHIAIV*ASRLLW Trigger: CCAAAGCAGTCTGCTGGCCCAGACTATTGCGATGTG...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR TCA 90 bp | AATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACACCTGCTGCTGGCGCATCTaGGCTATCCGCTGGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLFPMASLGYINRYRLNTCCWRI*AIRWRS Trigger: AGAGCGCCAGCGGATAGCTCAGATGCGCCAGCAGCA...GGTGTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR TCA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACTGCTGCTGGCGCATCTaGGCTATCCGCTGGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HNLFPMASLGYINRYRLNCCWRI*AIRWRS Trigger: AGAGCGCCAGCGGATAGCTCAGATGCGCCAGCAGCA...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR GCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACCCTCGAGCCAACTCCTaGTTCTTGAGTTGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNPRANS*FLSWSS Trigger: TGAAGACCAACTCAAGAAGCAGGAGTTGGCTCGAGG...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACTTGGGGAACACACAATaGCAATGGCCTCTGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNLGNTQ*QWPLAT Trigger: TGTTGCCAGAGGCCATTGCCATTGTGTGTTCCCCAA...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TCAGTCACTTCTGAAAACATCATAAGAAATTCGGCAGTCACACACGTCCACAGAACAGCTTGGGGTCCTTaGTGTGAGGATGGAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVTSENIIRNSAVTHVHRTAWGP*CEDGSP Trigger: AGGGCTTCCATCCTCACACCAAGGACCCCAAGCTGT...TCTGTGGACGTGTGTGACTGCCGAATTTCTTATGATGTTTTCAGAAGTGACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR TCA 90 bp | TCAGTCACTTCTGAAAACATCATAAGAAATTCGGCAGTCACACACGTCCACAGAGGATCCATCCCAGTGTaGGGAGACCATGTTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVTSENIIRNSAVTHVHRGSIPV*GDHVDP Trigger: AGGATCAACATGGTCTCCTCACACTGGGATGGATCC...TCTGTGGACGTGTGTGACTGCCGAATTTCTTATGATGTTTTCAGAAGTGACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | AATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACACCGAACAGCACTCAGGGTaGCTGCTGGCTTTAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NLFPMASLGYINRYRLNTEQHSG*LLALGP Trigger: GGGCCCTAAAGCCAGCAGCCACCCTGAGTGCTGTTC...GGTGTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TCAGTCACTTCTGAAAACATCATAAGAAATTCGGCAGTCACACACGTCCACAGACACATCGCAATAGTCTaGGCCAGCAGACTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVTSENIIRNSAVTHVHRHIAIV*ASRLLW Trigger: CCAAAGCAGTCTGCTGGCCCAGACTATTGCGATGTG...TCTGTGGACGTGTGTGACTGCCGAATTTCTTATGATGTTTTCAGAAGTGACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TCAGTCACTTCTGAAAACATCATAAGAAATTCGGCAGTCACACACGTCCACAGATGTGGAGATCCACACTaGACAGGAATGCCGTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVTSENIIRNSAVTHVHRCGDPH*TGMPFA Trigger: CGCAAACGGCATTCCTGTCCAGTGTGGATCTCCACA...TCTGTGGACGTGTGTGACTGCCGAATTTCTTATGATGTTTTCAGAAGTGACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR TCA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACAACACCGGAGAGTCCTaGCCTCGAATCTGGCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HNLFPMASLGYINRYRLNNTGES*PRIWPR Trigger: TCGAGGCCAGATTCGAGGTCAGGACTCTCCGGTGTT...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR GCA 90 bp | TCAGTCACTTCTGAAAACATCATAAGAAATTCGGCAGTCACACACGTCCACAGATATTACAACCAAGTTTaGTTAGGGCGCGGACCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVTSENIIRNSAVTHVHRYYNQV*LGRGPA Trigger: AGCGGGTCCGCGCCCTAAGCAAACTTGGTTGTAATA...TCTGTGGACGTGTGTGACTGCCGAATTTCTTATGATGTTTTCAGAAGTGACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACAATATCCTGCTTCTCTaGAACTGCACACTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNNILLL*NCTLLV Trigger: TACCAGCAGTGTGCAGTTCCAGAGAAGCAGGATATT...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TCAGTCACTTCTGAAAACATCATAAGAAATTCGGCAGTCACACACGTCCACAGATTGGGGAACACACAATaGCAATGGCCTCTGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: SVTSENIIRNSAVTHVHRLGNTQ*QWPLAT Trigger: TGTTGCCAGAGGCCATTGCCATTGTGTGTTCCCCAA...TCTGTGGACGTGTGTGACTGCCGAATTTCTTATGATGTTTTCAGAAGTGACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR GCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACTTTATGAGGGTGATCTaGAAATGCGTTCCTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNFMRVI*KCVPQR Trigger: TCTCTGAGGAACGCATTTGCAGATCACCCTCATAAA...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR GCA 90 bp | AATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACACCCACACTGGACAGGAATaGCGTTTGCGTGGGGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: NLFPMASLGYINRYRLNTHTGQE*RLRGVC Trigger: ACACACCCCACGCAAACGGCATTCCTGTCCAGTGTG...GGTGTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACAGAGAAACATCTGTATaGTCAGGCATAGCAGCTAAC | + |
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Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNRETSV*SGIAAN Trigger: GTTAGCTGCTATGCCTGACCATACAGATGTTTCTCT...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | AATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACACCAGTTGCTCTGGTGGGTaGAAAAGCAGGACAGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: NLFPMASLGYINRYRLNTSCSGG*KSRTAH Trigger: GTGCGCTGTCCTGCTTTTCCACCCACCAGAGCAACT...GGTGTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACACAGCTTGGGGTCCTTaGTGTGAGGATGGAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HNLFPMASLGYINRYRLNTAWGP*CEDGSP Trigger: AGGGCTTCCATCCTCACACCAAGGACCCCAAGCTGT...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR GCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACTTCCAAATACACAGATaGCATCCTTTCCATTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNFQIHR*HPFHFH Trigger: GTGGAAATGGAAAGGATGGCATCTGTGTATTTGGAA...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR GCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACTTCTTCATAATATCCTaGTTCTCTGGAACTGCACAC | + |
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Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNFFIIS*FSGTAH Trigger: GTGTGCAGTTCCAGAGAAGCAGGATATTATGAAGAA...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR GCA 90 bp | GCTTGTTATTTGCAGCACAATTTATTTCCGATGGCATCACTTGGGTATATTAATCACACTGGACAGGAATaGCGTTTGCGTGGGGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: ACYLQHNLFPMASLGYINHTGQE*RLRGVC Trigger: ACACACCCCACGCAAACGGCATTCCTGTCCAGTGTG...ATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTGCTGCAAATAACAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054956.15 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACGGTAATCTCGGTGGCTaGGAAGTTTTTCTACAAATA | + |
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Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNGNLGG*EVFLQI Trigger: TATTTGTAGAAAAACTTCCCAGCCACCGAGATTACC...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | TCAGTCACTTCTGAAAACATCATAAGAAATTCGGCAGTCACACACGTCCACAGAAATATCCTGCTTCTCTaGAACTGCACACTGCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: SVTSENIIRNSAVTHVHRNILLL*NCTLLV Trigger: TACCAGCAGTGTGCAGTTCCAGAGAAGCAGGATATT...TCTGTGGACGTGTGTGACTGCCGAATTTCTTATGATGTTTTCAGAAGTGACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACCTCAGAGAGTTGCTCTaGTGGGTGGAAAAGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: HNLFPMASLGYINRYRLNLRELL*WVEKQD Trigger: GTCCTGCTTTTCCACCCACCAGAGCAACTCTCTGAG...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACTGTGGAGATCCACACTaGACAGGAATGCCGTTTGCG | + |
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Preference number: 4 (lower is better) Translates to: HNLFPMASLGYINRYRLNCGDPH*TGMPFA Trigger: CGCAAACGGCATTCCTGTCCAGTGTGGATCTCCACA...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR TCA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACGTTGATCCTGAACATTaGATAATTCTTCGACGTTCT | + |
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Preference number: 4 (lower is better) Translates to: YINRYRLNTTWPRLRRSNVDPEH*IILRRS Trigger: AGAACGTCGAAGAATTATTCAATGTTCAGGATCAAC...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR GCA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACTATTACAACCAAGTTTaGTTAGGGCGCGGACCCGCT | + |
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Preference number: 4 (lower is better) Translates to: HNLFPMASLGYINRYRLNYYNQV*LGRGPA Trigger: AGCGGGTCCGCGCCCTAAGCAAACTTGGTTGTAATA...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR GCA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACCCTCGAGCCAACTCCTaGTTCTTGAGTTGGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: HNLFPMASLGYINRYRLNPRANS*FLSWSS Trigger: TGAAGACCAACTCAAGAAGCAGGAGTTGGCTCGAGG...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR GCA 90 bp | TCAGTCACTTCTGAAAACATCATAAGAAATTCGGCAGTCACACACGTCCACAGATTCCAAATACACAGATaGCATCCTTTCCATTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVTSENIIRNSAVTHVHRFQIHR*HPFHFH Trigger: GTGGAAATGGAAAGGATGGCATCTGTGTATTTGGAA...TCTGTGGACGTGTGTGACTGCCGAATTTCTTATGATGTTTTCAGAAGTGACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR GCA 90 bp | GCTTGTTATTTGCAGCACAATTTATTTCCGATGGCATCACTTGGGTATATTAATCTGCTTCTCTGGAACTaGACACTGCTGGTAATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ACYLQHNLFPMASLGYINLLLWN*TLLVIS Trigger: CGAGATTACCAGCAGTGTGCAGTTCCAGAGAAGCAG...ATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTGCTGCAAATAACAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054956.15 ENSMUST00000239240.2 |
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| CDS-3UTR GCA 90 bp | GCTTGTTATTTGCAGCACAATTTATTTCCGATGGCATCACTTGGGTATATTAATCCTCGAGCCAACTCCTaGTTCTTGAGTTGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ACYLQHNLFPMASLGYINPRANS*FLSWSS Trigger: TGAAGACCAACTCAAGAAGCAGGAGTTGGCTCGAGG...ATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTGCTGCAAATAACAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054956.15 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACCAATTCGTCTGTCCTTaGGAACGCAATCTCCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: HNLFPMASLGYINRYRLNQFVCP*ERNLLQ Trigger: CTGAAGGAGATTGCGTTCCCAAGGACAGACGAATTG...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS-3UTR CCA 90 bp | AATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACACCCAATTCGTCTGTCCTTaGGAACGCAATCTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLFPMASLGYINRYRLNTQFVCP*ERNLLQ Trigger: CTGAAGGAGATTGCGTTCCCAAGGACAGACGAATTG...GGTGTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CCA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACGCCAGCAGACTGCTTTaGCACAACCACATGAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HNLFPMASLGYINRYRLNASRLL*HNHMSN Trigger: ATTACTCATGTGGTTGTGCCAAAGCAGTCTGCTGGC...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CCA 90 bp | AATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACACCAATGGCAATGGCCTCTaGCAACATAAGCTGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLFPMASLGYINRYRLNTNGNGL*QHKLVG Trigger: TCCTACCAGCTTATGTTGCCAGAGGCCATTGCCATT...GGTGTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CCA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACAATGGCAATGGCCTCTaGCAACATAAGCTGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HNLFPMASLGYINRYRLNNGNGL*QHKLVG Trigger: TCCTACCAGCTTATGTTGCCAGAGGCCATTGCCATT...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CCA 90 bp | AATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACACCAATATCCTGCTTCTCTaGAACTGCACACTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NLFPMASLGYINRYRLNTNILLL*NCTLLV Trigger: TACCAGCAGTGTGCAGTTCCAGAGAAGCAGGATATT...GGTGTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CCA 90 bp | GCTTGTTATTTGCAGCACAATTTATTTCCGATGGCATCACTTGGGTATATTAATCAATTCGTCTGTCCTTaGGAACGCAATCTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACYLQHNLFPMASLGYINQFVCP*ERNLLQ Trigger: CTGAAGGAGATTGCGTTCCCAAGGACAGACGAATTG...ATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTGCTGCAAATAACAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054956.15 ENSMUST00000239240.2 |
||
| CDS-3UTR CCA 90 bp | GCTTGTTATTTGCAGCACAATTTATTTCCGATGGCATCACTTGGGTATATTAATGCCAGCAGACTGCTTTaGCACAACCACATGAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ACYLQHNLFPMASLGYINASRLL*HNHMSN Trigger: ATTACTCATGTGGTTGTGCCAAAGCAGTCTGCTGGC...ATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTGCTGCAAATAACAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054956.15 ENSMUST00000239240.2 |
||
| CDS-3UTR GCA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACTTTATGAGGGTGATCTaGAAATGCGTTCCTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNLFPMASLGYINRYRLNFMRVI*KCVPQR Trigger: TCTCTGAGGAACGCATTTGCAGATCACCCTCATAAA...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CCA 90 bp | AATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACACCAGAGAAACATCTGTATaGTCAGGCATAGCAGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLFPMASLGYINRYRLNTRETSV*SGIAAN Trigger: GTTAGCTGCTATGCCTGACCATACAGATGTTTCTCT...GGTGTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR GCA 90 bp | AATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACACCTTCTTCATAATATCCTaGTTCTCTGGAACTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: NLFPMASLGYINRYRLNTFFIIS*FSGTAH Trigger: GTGTGCAGTTCCAGAGAAGCAGGATATTATGAAGAA...GGTGTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR GCA 90 bp | GCTTGTTATTTGCAGCACAATTTATTTCCGATGGCATCACTTGGGTATATTAATTTTATGAGGGTGATCTaGAAATGCGTTCCTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ACYLQHNLFPMASLGYINFMRVI*KCVPQR Trigger: TCTCTGAGGAACGCATTTGCAGATCACCCTCATAAA...ATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTGCTGCAAATAACAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054956.15 ENSMUST00000239240.2 |
||
| CDS-3UTR CCA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACGGTAATCTCGGTGGCTaGGAAGTTTTTCTACAAATA | + |
|
Preference number: 4 (lower is better) Translates to: HNLFPMASLGYINRYRLNGNLGG*EVFLQI Trigger: TATTTGTAGAAAAACTTCCCAGCCACCGAGATTACC...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR TCA 90 bp | AATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACACCGTTGATCCTGAACATTaGATAATTCTTCGACGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLFPMASLGYINRYRLNTVDPEH*IILRRS Trigger: AGAACGTCGAAGAATTATTCAATGTTCAGGATCAAC...GGTGTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR GCA 90 bp | GCTTGTTATTTGCAGCACAATTTATTTCCGATGGCATCACTTGGGTATATTAATTTCTTCATAATATCCTaGTTCTCTGGAACTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ACYLQHNLFPMASLGYINFFIIS*FSGTAH Trigger: GTGTGCAGTTCCAGAGAAGCAGGATATTATGAAGAA...ATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTGCTGCAAATAACAAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054956.15 ENSMUST00000239240.2 |
||
| CDS-3UTR CCA 90 bp | GCTTGTTATTTGCAGCACAATTTATTTCCGATGGCATCACTTGGGTATATTAATGGTAATCTCGGTGGCTaGGAAGTTTTTCTACAAATA | + |
|
Preference number: 4 (lower is better) Translates to: ACYLQHNLFPMASLGYINGNLGG*EVFLQI Trigger: TATTTGTAGAAAAACTTCCCAGCCACCGAGATTACC...ATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTGCTGCAAATAACAAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054956.15 ENSMUST00000239240.2 |
||
| CDS-3UTR TCA 90 bp | GCTTGTTATTTGCAGCACAATTTATTTCCGATGGCATCACTTGGGTATATTAATGTTGATCCTGAACATTaGATAATTCTTCGACGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ACYLQHNLFPMASLGYINVDPEH*IILRRS Trigger: AGAACGTCGAAGAATTATTCAATGTTCAGGATCAAC...ATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTGCTGCAAATAACAAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054956.15 ENSMUST00000239240.2 |
||
| CDS TCA 90 bp | TCTCTTGATAAAACTACACACCTCAGCCCTTCAACCACCAAATTCTaGACAGCACTCAGGGTGGCTGCTGGCTTTAGGGCCCTGTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: SLDKTTHLSPSTTKF*TALRVAAGFRALFT Trigger: CGTGAACAGGGCCCTAAAGCCAGCAGCCACCCTGAGTGCTGTTCAGAATTTGGTGGTTGAAGGGCTGAGGTGTGTAGTTTTATCAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS GCA 90 bp | CATCACTTTTATGAGGGTGATCTGCAAATGCGTTCCTCAGAGAGTTaGTCTGGTGGGTGGAAAAGCAGGACAGCGCACTTCCGTCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HHFYEGDLQMRSSES*SGGWKSRTAHFRQS Trigger: AGACTGACGGAAGTGCGCTGTCCTGCTTTTCCACCCACCAGAGCAACTCTCTGAGGAACGCATTTGCAGATCACCCTCATAAAAGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACGCGTTCCTCAGAGAGTaGCTCTGGTGGGTGGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: YINRYRLNTTWPRLRRSNAFLRE*LWWVEK Trigger: CTTTTCCACCCACCAGAGCAACTCTCTGAGGAACGC...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACTCAAGCATGCCAGCGTaGGTGAGCCTGAAAATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: YINRYRLNTTWPRLRRSNSSMPA*VSLKMP Trigger: CGGCATTTTCAGGCTCACCAACGCTGGCATGCTTGA...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACATATTACAACCAAGTTaGCTTAGGGCGCGGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: YINRYRLNTTWPRLRRSNILQPS*LRARTR Trigger: GCGGGTCCGCGCCCTAAGCAAACTTGGTTGTAATAT...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS GCA 90 bp | GTTAGCGAAATTGCTTCCATCACTTTTATGAGGGTGATCTGCAAATaGGTTCCTCAGAGAGTTGCTCTGGTGGGTGGAAAAGCAGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: VSEIASITFMRVICK*VPQRVALVGGKAGQ Trigger: CTGTCCTGCTTTTCCACCCACCAGAGCAACTCTCTGAGGAACGCATTTGCAGATCACCCTCATAAAAGTGATGGAAGCAATTTCGCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS CCA 90 bp | CTTAGGGCGCGGACCCGCTCCTCTGGACTTAGAGAAACATCTGTATaGTCAGGCATAGCAGCTAACTTTTTCAGTGAATTCACAGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LRARTRSSGLRETSV*SGIAANFFSEFTVN Trigger: ATTCACTGTGAATTCACTGAAAAAGTTAGCTGCTATGCCTGACCATACAGATGTTTCTCTAAGTCCAGAGGAGCGGGTCCGCGCCCTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000129535.8 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTCACTTCTGAAAACATCATAAGAAATTCGGCAGTCACACACGTCCACAGATCAAGCATGCCAGCGTaGGTGAGCCTGAAAATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SVTSENIIRNSAVTHVHRSSMPA*VSLKMP Trigger: CGGCATTTTCAGGCTCACCAACGCTGGCATGCTTGA...TCTGTGGACGTGTGTGACTGCCGAATTTCTTATGATGTTTTCAGAAGTGACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTCACTTCTGAAAACATCATAAGAAATTCGGCAGTCACACACGTCCACAGAATATTACAACCAAGTTaGCTTAGGGCGCGGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SVTSENIIRNSAVTHVHRILQPS*LRARTR Trigger: GCGGGTCCGCGCCCTAAGCAAACTTGGTTGTAATAT...TCTGTGGACGTGTGTGACTGCCGAATTTCTTATGATGTTTTCAGAAGTGACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS TCA 90 bp | ACTAACACATGGCTGCATATACTGAACAGCTTGGGGTCCTTGGTGTaGGGATGGAAGCCCTTCTTTTTACAAGTAGAAACCTCAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TNTWLHILNSLGSLV*GWKPFFLQVETSSM Trigger: CATGCTTGAGGTTTCTACTTGTAAAAAGAAGGGCTTCCATCCTCACACCAAGGACCCCAAGCTGTTCAGTATATGCAGCCATGTGTTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS GCA 90 bp | CGCAATCTCCTTCAGTTTCTTCATAATATCCTGCTTCTCTGGAACTaGACACTGCTGGTAATCTCGGTGGCTGGGAAGTTTTTCTACAAA | + |
|
Preference number: 5 (lower is better) Translates to: RNLLQFLHNILLLWN*TLLVISVAGKFFYK Trigger: TTTGTAGAAAAACTTCCCAGCCACCGAGATTACCAGCAGTGTGCAGTTCCAGAGAAGCAGGATATTATGAAGAAACTGAAGGAGATTGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS CCA 90 bp | AGATGCCATCCTTTCCATTTCCACTCCGGACCTGAAGTAACGGCGTaGGGTGATATCTTCATTAATGGAGATATTACAACCAAGTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCHPFHFHSGPEVTA*GDIFINGDITTKFA Trigger: AGCAAACTTGGTTGTAATATCTCCATTAATGAAGATATCACCCCACGCCGTTACTTCAGGTCCGGAGTGGAAATGGAAAGGATGGCATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000129535.8 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTCACTTCTGAAAACATCATAAGAAATTCGGCAGTCACACACGTCCACAGATCAATTCGTCTGTCCTaGGGAACGCAATCTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVTSENIIRNSAVTHVHRSIRLS*GTQSPS Trigger: TGAAGGAGATTGCGTTCCCAAGGACAGACGAATTGA...TCTGTGGACGTGTGTGACTGCCGAATTTCTTATGATGTTTTCAGAAGTGACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACGCGTTCCTCAGAGAGTaGCTCTGGTGGGTGGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HNLFPMASLGYINRYRLNAFLRE*LWWVEK Trigger: CTTTTCCACCCACCAGAGCAACTCTCTGAGGAACGC...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACTCAAGCATGCCAGCGTaGGTGAGCCTGAAAATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HNLFPMASLGYINRYRLNSSMPA*VSLKMP Trigger: CGGCATTTTCAGGCTCACCAACGCTGGCATGCTTGA...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | GCTTGTTATTTGCAGCACAATTTATTTCCGATGGCATCACTTGGGTATATTAATGCGTTCCTCAGAGAGTaGCTCTGGTGGGTGGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ACYLQHNLFPMASLGYINAFLRE*LWWVEK Trigger: CTTTTCCACCCACCAGAGCAACTCTCTGAGGAACGC...ATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTGCTGCAAATAACAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054956.15 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | GCTTGTTATTTGCAGCACAATTTATTTCCGATGGCATCACTTGGGTATATTAATATATTACAACCAAGTTaGCTTAGGGCGCGGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ACYLQHNLFPMASLGYINILQPS*LRARTR Trigger: GCGGGTCCGCGCCCTAAGCAAACTTGGTTGTAATAT...ATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTGCTGCAAATAACAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054956.15 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | TATATTAATAGGTATAGGCTGAACACCACGTGGCCTCGTTTGAGACGCAGCAACTATGGCAAAGATCTCTaGATAAAACTACACACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YINRYRLNTTWPRLRRSNYGKDL*IKLHTS Trigger: TGAGGTGTGTAGTTTTATCAAGAGATCTTTGCCATA...GTTGCTGCGTCTCAAACGAGGCCACGTGGTGTTCAGCCTATACCTATTAATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | AATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACACCTCAATTCGTCTGTCCTaGGGAACGCAATCTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NLFPMASLGYINRYRLNTSIRLS*GTQSPS Trigger: TGAAGGAGATTGCGTTCCCAAGGACAGACGAATTGA...GGTGTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | CACAATTTATTTCCGATGGCATCACTTGGGTATATTAATAGGTATAGGCTGAACTATGGCAAAGATCTCTaGATAAAACTACACACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HNLFPMASLGYINRYRLNYGKDL*IKLHTS Trigger: TGAGGTGTGTAGTTTTATCAAGAGATCTTTGCCATA...GTTCAGCCTATACCTATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS-3UTR CAA 90 bp | GCTTGTTATTTGCAGCACAATTTATTTCCGATGGCATCACTTGGGTATATTAATTATGGCAAAGATCTCTaGATAAAACTACACACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ACYLQHNLFPMASLGYINYGKDL*IKLHTS Trigger: TGAGGTGTGTAGTTTTATCAAGAGATCTTTGCCATA...ATTAATATACCCAAGTGATGCCATCGGAAATAAATTGTGCTGCAAATAACAAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054956.15 ENSMUST00000239240.2 |
||
| CDS TCA 72 bp | CTTCCGTCAGTCTGCTCAGACAACACCGGAGAGTCCTaGCCTCGAATCTGGCCTCGAGCCAACTCCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LPSVCSDNTGES*PRIWPRANSCF Trigger: GAAGCAGGAGTTGGCTCGAGGCCAGATTCGAGGTCAGGACTCTCCGGTGTTGTCTGAGCAGACTGACGGAAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS CCA 72 bp | GCCCTTCAACCACCAAATTCTGAACAGCACTCAGGGTaGCTGCTGGCTTTAGGGCCCTGTTCACGGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALQPPNSEQHSG*LLALGPCSREE Trigger: CTCCTCCCGTGAACAGGGCCCTAAAGCCAGCAGCCACCCTGAGTGCTGTTCAGAATTTGGTGGTTGAAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS TCA 72 bp | AGGAACTGTTCAGACTCTAGTTGCTGCTGGCGCATCTaGGCTATCCGCTGGCGCTCTGCCTCTATCAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RNCSDSSCCWRI*AIRWRSASISL Trigger: GAGACTGATAGAGGCAGAGCGCCAGCGGATAGCTCAGATGCGCCAGCAGCAACTAGAGTCTGAACAGTTCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS TCA 72 bp | AAAACTACACACCTCAGCCCTTCAACCACCAAATTCTaGACAGCACTCAGGGTGGCTGCTGGCTTTAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KTTHLSPSTTKF*TALRVAAGFRA Trigger: GGCCCTAAAGCCAGCAGCCACCCTGAGTGCTGTTCAGAATTTGGTGGTTGAAGGGCTGAGGTGTGTAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
||
| CDS GCA 72 bp | TTGCTGCTGGCGCATCTGAGCTATCCGCTGGCGCTCTaGCTCTATCAGTCTCTGATGTTCCAACTTTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLLAHLSYPLAL*LYQSLMFQLFE Trigger: CTCAAAAAGTTGGAACATCAGAGACTGATAGAGGCAGAGCGCCAGCGGATAGCTCAGATGCGCCAGCAGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS CAA 90 bp | CGGCGTGGGGTGATATCTTCATTAATGGAGATATTACAACCAAGTTaGCTTAGGGCGCGGACCCGCTCCTCTGGACTTAGAGAAACATCT | + |
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Preference number: 6 (lower is better) Translates to: RRGVISSLMEILQPS*LRARTRSSGLRETS Trigger: AGATGTTTCTCTAAGTCCAGAGGAGCGGGTCCGCGCCCTAAGCAAACTTGGTTGTAATATCTCCATTAATGAAGATATCACCCCACGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000129535.8 ENSMUST00000239240.2 |
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| CDS CCA 72 bp | CTCCACATCGCAATAGTCTGGGCCAGCAGACTGCTTTaGCACAACCACATGAGTAATGGTGAATTCATTGTG | + |
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Preference number: 6 (lower is better) Translates to: LHIAIVWASRLL*HNHMSNGEFIV Trigger: CACAATGAATTCACCATTACTCATGTGGTTGTGCCAAAGCAGTCTGCTGGCCCAGACTATTGCGATGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS CCA 72 bp | CGGACCCGCTCCTCTGGACTTAGAGAAACATCTGTATaGTCAGGCATAGCAGCTAACTTTTTCAGTGAATTC | + |
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Preference number: 6 (lower is better) Translates to: RTRSSGLRETSV*SGIAANFFSEF Trigger: GAATTCACTGAAAAAGTTAGCTGCTATGCCTGACCATACAGATGTTTCTCTAAGTCCAGAGGAGCGGGTCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000129535.8 ENSMUST00000239240.2 |
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| CDS GCA 72 bp | CTTCAGTTTCTTCATAATATCCTGCTTCTCTGGAACTaGACACTGCTGGTAATCTCGGTGGCTGGGAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LQFLHNILLLWN*TLLVISVAGKF Trigger: AAACTTCCCAGCCACCGAGATTACCAGCAGTGTGCAGTTCCAGAGAAGCAGGATATTATGAAGAAACTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000129535.8 ENSMUST00000239240.2 |
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| CDS GCA 72 bp | ATTGCTTCCATCACTTTTATGAGGGTGATCTGCAAATaGGTTCCTCAGAGAGTTGCTCTGGTGGGTGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: IASITFMRVICK*VPQRVALVGGK Trigger: TTTTCCACCCACCAGAGCAACTCTCTGAGGAACGCATTTGCAGATCACCCTCATAAAAGTGATGGAAGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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| CDS CCA 72 bp | CCTTTCCATTTCCACTCCGGACCTGAAGTAACGGCGTaGGGTGATATCTTCATTAATGGAGATATTACAACC | + |
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Preference number: 6 (lower is better) Translates to: PFHFHSGPEVTA*GDIFINGDITT Trigger: GGTTGTAATATCTCCATTAATGAAGATATCACCCCACGCCGTTACTTCAGGTCCGGAGTGGAAATGGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000129535.8 ENSMUST00000239240.2 |
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| CDS CAA 72 bp | GTGATATCTTCATTAATGGAGATATTACAACCAAGTTaGCTTAGGGCGCGGACCCGCTCCTCTGGACTTAGA | + |
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Preference number: 6 (lower is better) Translates to: VISSLMEILQPS*LRARTRSSGLR Trigger: TCTAAGTCCAGAGGAGCGGGTCCGCGCCCTAAGCAAACTTGGTTGTAATATCTCCATTAATGAAGATATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000129535.8 ENSMUST00000239240.2 |
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| CDS CAA 72 bp | TTCTTTTTACAAGTAGAAACCTCAAGCATGCCAGCGTaGGTGAGCCTGAAAATGCCGGTGTCTTTATGCTTT | + |
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Preference number: 6 (lower is better) Translates to: FFLQVETSSMPA*VSLKMPVSLCF Trigger: AAAGCATAAAGACACCGGCATTTTCAGGCTCACCAACGCTGGCATGCTTGAGGTTTCTACTTGTAAAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054956.15 ENSMUST00000119603.2 ENSMUST00000239240.2 |
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