Pregenerated sensors for STAM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055371Ensembl transcript IDs: ENSMUST00000102759.8, ENSMUST00000127316.8, ENSMUST00000155516.2
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGTCCTGTCAGCCTGTGGCCACCACACCGCTGCCTGCTGCTCCTaGAAAGGCTCACAACTACTTCTAGGGGACACACAATCCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: AVLSACGHHTAACCS*KGSQLLLGDTQSLP Trigger: GGGAAGGGATTGTGTGTCCCCTAGAAGTAGTTGTGAGCCTTTGCAGGAGCAGCAGGCAGCGGTGTGGTGGCCACAGGCTGACAGGACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR GCA 90 bp | CAGCTGACTGCTGTCCTGTCAGCCTGTGGCCACCACACCGCTGCCTaGTGCTCCTGCAAAGGCTCACAACTACTTCTAGGGGACACACAA | + |
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Preference number: 1 (lower is better) Translates to: QLTAVLSACGHHTAA*CSCKGSQLLLGDTQ Trigger: TTGTGTGTCCCCTAGAAGTAGTTGTGAGCCTTTGCAGGAGCAGCAGGCAGCGGTGTGGTGGCCACAGGCTGACAGGACAGCAGTCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR CCA 90 bp | TTAGCTGAAGTAAAGCAACCCCATCCCACCCAGCGGGAGCAGCAGTaGCCACTTCAGCAACTCCACTTAGGAGTGGGACTGGGAGAGCGG | + |
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Preference number: 1 (lower is better) Translates to: LAEVKQPHPTQREQQ*PLQQLHLGVGLGER Trigger: CCGCTCTCCCAGTCCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGCTGGGTGGGATGGGGTTGCTTTACTTCAGCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| 3UTR TCA 90 bp | AGGACTGAAAAGCCTTCCAGGGTCCTGCATCTGACAACCAGACACTaGCAAGATACAGGCTTGCAGGGACGGCCCACGCTCTCTTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: RTEKPSRVLHLTTRH*QDTGLQGRPTLSSV Trigger: CACAGAAGAGAGCGTGGGCCGTCCCTGCAAGCCTGTATCTTGTCAGTGTCTGGTTGTCAGATGCAGGACCCTGGAAGGCTTTTCAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR CCA 90 bp | AGGATGCCCTTTCTGGGGAAGGCTAACATCTCCTGGGGCAGTCCCTaGCCCTCGTCTGTCAGAGGACTGGCTAACTGCTCCACAATATTT | + |
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Preference number: 1 (lower is better) Translates to: RMPFLGKANISWGSP*PSSVRGLANCSTIF Trigger: AAATATTGTGGAGCAGTTAGCCAGTCCTCTGACAGACGAGGGCCAGGGACTGCCCCAGGAGATGTTAGCCTTCCCCAGAAAGGGCATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR CCA 90 bp | ACAATTCTAAATACCAGGGACACGAGTATGAGAGGATGCCCTTTCTaGGGAAGGCTAACATCTCCTGGGGCAGTCCCTGGCCCTCGTCTG | + |
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Preference number: 1 (lower is better) Translates to: TILNTRDTSMRGCPF*GRLTSPGAVPGPRL Trigger: CAGACGAGGGCCAGGGACTGCCCCAGGAGATGTTAGCCTTCCCCAGAAAGGGCATCCTCTCATACTCGTGTCCCTGGTATTTAGAATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR TCA 90 bp | GAAGGGAGAAGGCCGTGTGAAACACAGAAGGTGAGGGCTAAGGACTaGAAAGCCTTCCAGGGTCCTGCATCTGACAACCAGACACTGACA | + |
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Preference number: 1 (lower is better) Translates to: EGRRPCETQKVRAKD*KAFQGPASDNQTLT Trigger: TGTCAGTGTCTGGTTGTCAGATGCAGGACCCTGGAAGGCTTTTCAGTCCTTAGCCCTCACCTTCTGTGTTTCACACGGCCTTCTCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR CCA 90 bp | TCTGACTCTCCGTGCAGCCTTGTTATTGAGCTGACTCTCTGCGGGTaGGTACAAAGCCTTTGTCTCCGTGTACTGCTGCTTCTGCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: SDSPCSLVIELTLCG*VQSLCLRVLLLLLL Trigger: CAAGAGCAGAAGCAGCAGTACACGGAGACAAAGGCTTTGTACCCACCCGCAGAGAGTCAGCTCAATAACAAGGCTGCACGGAGAGTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
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| 3UTR TCA 90 bp | GGTCTTAAGTGTGGGTTTAAATCTTCGCAACTACCAAGGTTTAGCTaGAGTAAAGCAACCCCATCCCACCCAGCGGGAGCAGCAGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: GLKCGFKSSQLPRFS*SKATPSHPAGAAVA Trigger: GGCCACTGCTGCTCCCGCTGGGTGGGATGGGGTTGCTTTACTTCAGCTAAACCTTGGTAGTTGCGAAGATTTAAACCCACACTTAAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| 3UTR TCA 90 bp | AAGTCGTATAAAGCTCTGACTCTCCGTGCAGCCTTGTTATTGAGCTaGCTCTCTGCGGGTGGGTACAAAGCCTTTGTCTCCGTGTACTGC | + |
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Preference number: 1 (lower is better) Translates to: KSYKALTLRAALLLS*LSAGGYKAFVSVYC Trigger: GCAGTACACGGAGACAAAGGCTTTGTACCCACCCGCAGAGAGTCAGCTCAATAACAAGGCTGCACGGAGAGTCAGAGCTTTATACGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
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| 3UTR CCA 90 bp | CTAACATCTCCTGGGGCAGTCCCTGGCCCTCGTCTGTCAGAGGACTaGCTAACTGCTCCACAATATTTGCATTTACATGGTTTTCACTGG | + |
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Preference number: 1 (lower is better) Translates to: LTSPGAVPGPRLSED*LTAPQYLHLHGFHW Trigger: CCAGTGAAAACCATGTAAATGCAAATATTGTGGAGCAGTTAGCCAGTCCTCTGACAGACGAGGGCCAGGGACTGCCCCAGGAGATGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR TCA 90 bp | CAACTACTTCTAGGGGACACACAATCCCTTCCCAATGGCACACGATaGCAGCTTTCTGTAAGAAAGGAACGCCCACCTCACACTGATACC | + |
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Preference number: 1 (lower is better) Translates to: QLLLGDTQSLPNGTR*QLSVRKERPPHTDT Trigger: GGTATCAGTGTGAGGTGGGCGTTCCTTTCTTACAGAAAGCTGTCATCGTGTGCCATTGGGAAGGGATTGTGTGTCCCCTAGAAGTAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR GCA 90 bp | TCCTGGGGCAGTCCCTGGCCCTCGTCTGTCAGAGGACTGGCTAACTaGTCCACAATATTTGCATTTACATGGTTTTCACTGGTAATGACA | + |
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Preference number: 1 (lower is better) Translates to: SWGSPWPSSVRGLAN*STIFAFTWFSLVMT Trigger: TGTCATTACCAGTGAAAACCATGTAAATGCAAATATTGTGGAGCAGTTAGCCAGTCCTCTGACAGACGAGGGCCAGGGACTGCCCCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR CCA 90 bp | CAAAGGCTCACAACTACTTCTAGGGGACACACAATCCCTTCCCAATaGCACACGATGACAGCTTTCTGTAAGAAAGGAACGCCCACCTCA | + |
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Preference number: 1 (lower is better) Translates to: QRLTTTSRGHTIPSQ*HTMTAFCKKGTPTS Trigger: TGAGGTGGGCGTTCCTTTCTTACAGAAAGCTGTCATCGTGTGCCATTGGGAAGGGATTGTGTGTCCCCTAGAAGTAGTTGTGAGCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR GCA 90 bp | CTGATGCCCTCTTCTGGCCTCAGAGTGAACCAGGCATGCATGTGGTaGATAGATGCACATGCAGACAAAACACCTATAAACCTGAAACAC | + |
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Preference number: 1 (lower is better) Translates to: LMPSSGLRVNQACMW*IDAHADKTPINLKH Trigger: GTGTTTCAGGTTTATAGGTGTTTTGTCTGCATGTGCATCTATGCACCACATGCATGCCTGGTTCACTCTGAGGCCAGAAGAGGGCATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR CCA 90 bp | CCACCTCACACTGATACCCATGATGGTTCCTATCACATCAGGTTATaGGGAGTGTCTCCTGGCTCAGATTCACTGAGAATCCCTAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: PPHTDTHDGSYHIRL*GVSPGSDSLRIPKK Trigger: CTTCTTAGGGATTCTCAGTGAATCTGAGCCAGGAGACACTCCCCATAACCTGATGTGATAGGAACCATCATGGGTATCAGTGTGAGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR CCA 90 bp | GACAAGATACAGGCTTGCAGGGACGGCCCACGCTCTCTTCTGTGCTaGCTATTTTATGCAGTAGTAGGTTCTAGAATACAGTTTCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: DKIQACRDGPRSLLC*LFYAVVGSRIQFLW Trigger: CCAAAGAAACTGTATTCTAGAACCTACTACTGCATAAAATAGCCAGCACAGAAGAGAGCGTGGGCCGTCCCTGCAAGCCTGTATCTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR TCA 90 bp | CAGGTTCATCTCTCTAAGAGTTCCAGGCCAGTCTGGTCTACACAGTaGATTCTAGGACAGATAGGGCTATGTAGAGATACCATCTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: QVHLSKSSRPVWSTQ*ILGQIGLCRDTISN Trigger: GTTGGAGATGGTATCTCTACATAGCCCTATCTGTCCTAGAATTCACTGTGTAGACCAGACTGGCCTGGAACTCTTAGAGAGATGAACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| 3UTR GCA 90 bp | CTCTTCTGGCCTCAGAGTGAACCAGGCATGCATGTGGTGCATAGATaGACATGCAGACAAAACACCTATAAACCTGAAACACATAAAACT | + |
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Preference number: 1 (lower is better) Translates to: LFWPQSEPGMHVVHR*TCRQNTYKPETHKT Trigger: AGTTTTATGTGTTTCAGGTTTATAGGTGTTTTGTCTGCATGTGCATCTATGCACCACATGCATGCCTGGTTCACTCTGAGGCCAGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR CCA 90 bp | AACATGAAATGCACAAACACTAGCATGAGCTTATTAAACACAGTTTaGAAGGGCAGGGAAGACGCATTCCTCTACACAAACGTTATCAAG | + |
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Preference number: 1 (lower is better) Translates to: NMKCTNTSMSLLNTV*KGREDAFLYTNVIK Trigger: CTTGATAACGTTTGTGTAGAGGAATGCGTCTTCCCTGCCCTTCCAAACTGTGTTTAATAAGCTCATGCTAGTGTTTGTGCATTTCATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR TCA 90 bp | TTATCAAGGGCAGCTCTGGACTTTTACATTTATTTACTTAATCTTTaGAGAGCAGAAGGCTGTTCTAGAAACAGTAAGGTACCATTTTGC | + |
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Preference number: 1 (lower is better) Translates to: LSRAALDFYIYLLNL*RAEGCSRNSKVPFC Trigger: GCAAAATGGTACCTTACTGTTTCTAGAACAGCCTTCTGCTCTTCAAAGATTAAGTAAATAAATGTAAAAGTCCAGAGCTGCCCTTGATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR-3UTR TCA 90 bp | GCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGAGTGGGACTGGGAGAGGCAGCACCCACCTTTaGTTCCAGTACTCAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: AGAAVATSATPLRSGTGRGSTHL*FQYSGG Trigger: GCCTCCTGAGTACTGGAATCAAAGGTGGGTGCTGCC...TCTCCCAGTCCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| 3UTR CAA 90 bp | CACTTAGGAGTGGGACTGGGAGAGCGGGCGCGGCAGCACCCACCTTaGATTCCAGTACTCAGGAGGCAGAGGCAGGTTCATCTCTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: HLGVGLGERARQHPP*IPVLRRQRQVHLSK Trigger: CTTAGAGAGATGAACCTGCCTCTGCCTCCTGAGTACTGGAATCAAAGGTGGGTGCTGCCGCGCCCGCTCTCCCAGTCCCACTCCTAAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTCTCCTGGCTCAGATTCACTGAGAATCCCTAAGAAGGAAGTGCAGTGTCTGTCCTGGGGCAGTCCCTaGCCCTCGTCTGTCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VSPGSDSLRIPKKEVQCLSWGSP*PSSVRG Trigger: TCCTCTGACAGACGAGGGCCAGGGACTGCCCCAGGA...CAGACACTGCACTTCCTTCTTAGGGATTCTCAGTGAATCTGAGCCAGGAGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR-3UTR CCA 90 bp | AATGATGTCCCGTTTTTGGCAGCAGCCGCGACAGTCTGGGAGCCTGCGGAAGGAATTTGTGGCTTTTTCTaGGAGGGTGAGGCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: NDVPFLAAAATVWEPAEGICGFF*EGEAGG Trigger: TCCTCCTGCCTCACCCTCCCAGAAAAAGCCACAAAT...TCCTTCCGCAGGCTCCCAGACTGTCGCGGCTGCTGCCAAAAACGGGACATCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTGGGTACAAAGCCTTTGTCTCCGTGTACTGCTGCTTCTGCTCTTGCAACGAGCCTGCAGAGCAACGTaGGGGACCTTATGGTTTACC | + |
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Preference number: 2 (lower is better) Translates to: GWVQSLCLRVLLLLLLQRACRAT*GTLWFT Trigger: GGTAAACCATAAGGTCCCTCACGTTGCTCTGCAGGC...TCGTTGCAAGAGCAGAAGCAGCAGTACACGGAGACAAAGGCTTTGTACCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
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| 3UTR-3UTR TCA 90 bp | TCCACTGGGAGTGCTTCCAACCCTGTCACAGATGTCCATGATCAGACTCCAGTCGGCAGGAGGATCCCTTaGACTCAGGAGTTTTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: STGSASNPVTDVHDQTPVGRRIP*TQEFWK Trigger: CTTCCAAAACTCCTGAGTTCAAGGGATCCTCCTGCC...GACTGGAGTCTGATCATGGACATCTGTGACAGGGTTGGAAGCACTCCCAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGCGGGTGGGTACAAAGCCTTTGTCTCCGTGTACTGCTGCTTCTGCTCTTTTGCTCCACTGGGAGTaGTTCCAACCCTGTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: SLRVGTKPLSPCTAASALLLHWE*FQPCHR Trigger: TCTGTGACAGGGTTGGAAGCACTCCCAGTGGAGCAA...AAGAGCAGAAGCAGCAGTACACGGAGACAAAGGCTTTGTACCCACCCGCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCCTTTAAAGAGATTCCAGAGGTGGAGAGGCGGCTCACAACCCTCCCTAACTCATGTGGTGCATAGATaGACATGCAGACAAAACACC | + |
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Preference number: 2 (lower is better) Translates to: KPLKRFQRWRGGSQPSLTHVVHR*TCRQNT Trigger: GGTGTTTTGTCTGCATGTGCATCTATGCACCACATG...AGTTAGGGAGGGTTGTGAGCCGCCTCTCCACCTCTGGAATCTCTTTAAAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGAACGCCCACCTCACACTGATACCCATGATGGTTCCTATCACATCAGGGGGAAATTCAAGGGGTaGGGGAAGTGCAGACAAAAA | + |
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Preference number: 2 (lower is better) Translates to: RKERPPHTDTHDGSYHIRGKFKG*GKCRQK Trigger: TTTTTGTCTGCACTTCCCCCACCCCTTGAATTTCCC...CCTGATGTGATAGGAACCATCATGGGTATCAGTGTGAGGTGGGCGTTCCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCAGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCAAGAGGATGCCCTTTCTaGGGAAGGCTAACATCTCCT | + |
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Preference number: 2 (lower is better) Translates to: KCSVCICSRQEIQRTAPSRGCPF*GRLTSP Trigger: AGGAGATGTTAGCCTTCCCCAGAAAGGGCATCCTCT...TGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACTGCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTTTGTTCAATGATGTCCCGTTTTTGGCAGCAGCCGCGACAGTCTGGGAGCAATTGGGGGTCCTTCTaGAATTCTTCTGACCATTCC | + |
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Preference number: 2 (lower is better) Translates to: CFCSMMSRFWQQPRQSGSNWGSF*NSSDHS Trigger: GGAATGGTCAGAAGAATTCCAGAAGGACCCCCAATT...GCTCCCAGACTGTCGCGGCTGCTGCCAAAAACGGGACATCATTGAACAAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCCTTTAAAGAGATTCCAGAGGTGGAGAGGCGGCTCACAACCCTCCCTAACTAGTAAGGTACCATTTTaGACGCACTCCATCCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: KPLKRFQRWRGGSQPSLTSKVPF*THSILV Trigger: TACAAGGATGGAGTGCGTGCAAAATGGTACCTTACT...AGTTAGGGAGGGTTGTGAGCCGCCTCTCCACCTCTGGAATCTCTTTAAAGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR CAA 90 bp | AACGATAACTCAATAGCTTTAGCTATGTCCTCATCTTCTTTGTTTTaGTTCAATGATGTCCCGTTTTTGGCAGCAGCCGCGACAGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: NDNSIALAMSSSSLF*FNDVPFLAAAATVW Trigger: CCAGACTGTCGCGGCTGCTGCCAAAAACGGGACATCATTGAACAAAAACAAAGAAGATGAGGACATAGCTAAAGCTATTGAGTTATCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAAATATCATGGATCCGAGTCCTGTGCATCTATGTTTTCTAGTTTATGTTGTAGACAAGCAGCTGACTaGTGTCCTGTCAGCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: CKYHGSESCASMFSSLCCRQAAD*CPVSLW Trigger: CCACAGGCTGACAGGACAGCAGTCAGCTGCTTGTCT...ACAACATAAACTAGAAAACATAGATGCACAGGACTCGGATCCATGATATTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR CAA 90 bp | TCTTGCAACGATAACTCAATAGCTTTAGCTATGTCCTCATCTTCTTaGTTTTTGTTCAATGATGTCCCGTTTTTGGCAGCAGCCGCGACA | + |
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Preference number: 2 (lower is better) Translates to: SCNDNSIALAMSSSS*FLFNDVPFLAAAAT Trigger: TGTCGCGGCTGCTGCCAAAAACGGGACATCATTGAACAAAAACAAAGAAGATGAGGACATAGCTAAAGCTATTGAGTTATCGTTGCAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACTTTCAAGGTCTTCAGTaGTCCTCAAAAATCACATCT | + |
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Preference number: 2 (lower is better) Translates to: SVCICSRQEIQRTAPSLDFQGLQ*SSKITS Trigger: AGATGTGATTTTTGAGGAGCACTGAAGACCTTGAAA...GTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTTTCATAGACTTAATAGTTGCAGATATCAGACTAAATTGGGGGTCCTTCTGTCACAGATGTCCATaGTCAGACTCCAGTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SSFIDLIVADIRLNWGSFCHRCP*SDSSLL Trigger: CAGAAGACTGGAGTCTGATCATGGACATCTGTGACA...GAAGGACCCCCAATTTAGTCTGATATCTGCAACTATTAAGTCTATGAAAGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAAATATCATGGATCCGAGTCCTGTGCATCTATGTTTTCTAGTTTATGTTGTAGAGGACTGGCTAACTaGTCCACAATATTTGCATTT | + |
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Preference number: 2 (lower is better) Translates to: CKYHGSESCASMFSSLCCRGLAN*STIFAF Trigger: AAATGCAAATATTGTGGAGCAGTTAGCCAGTCCTCT...ACAACATAAACTAGAAAACATAGATGCACAGGACTCGGATCCATGATATTTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR TCA 72 bp | TGGGACTGGGAGAGCGGGCGCGGCAGCACCCACCTTTaGTTCCAGTACTCAGGAGGCAGAGGCAGGTTCATC | + |
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Preference number: 3 (lower is better) Translates to: WDWESGRGSTHL*FQYSGGRGRFI Trigger: GATGAACCTGCCTCTGCCTCCTGAGTACTGGAATCAAAGGTGGGTGCTGCCGCGCCCGCTCTCCCAGTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| 3UTR-3UTR CAA 90 bp | TCCCACCCAGCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGAGTGGGCGGCAGCACCCACCTTaGATTCCAGTACTCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SHPAGAAVATSATPLRSGRQHPP*IPVLRR Trigger: CCTCCTGAGTACTGGAATCAAAGGTGGGTGCTGCCG...CCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGCTGGGTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| 3UTR CCA 72 bp | TTTCTGGGGAAGGCTAACATCTCCTGGGGCAGTCCCTaGCCCTCGTCTGTCAGAGGACTGGCTAACTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: FLGKANISWGSP*PSSVRGLANCS Trigger: GGAGCAGTTAGCCAGTCCTCTGACAGACGAGGGCCAGGGACTGCCCCAGGAGATGTTAGCCTTCCCCAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR CCA 72 bp | GTAAAGCAACCCCATCCCACCCAGCGGGAGCAGCAGTaGCCACTTCAGCAACTCCACTTAGGAGTGGGACTG | + |
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Preference number: 3 (lower is better) Translates to: VKQPHPTQREQQ*PLQQLHLGVGL Trigger: CAGTCCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGCTGGGTGGGATGGGGTTGCTTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| 3UTR TCA 72 bp | AAGCCTTCCAGGGTCCTGCATCTGACAACCAGACACTaGCAAGATACAGGCTTGCAGGGACGGCCCACGCTC | + |
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Preference number: 3 (lower is better) Translates to: KPSRVLHLTTRH*QDTGLQGRPTL Trigger: GAGCGTGGGCCGTCCCTGCAAGCCTGTATCTTGTCAGTGTCTGGTTGTCAGATGCAGGACCCTGGAAGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR GCA 72 bp | TCAGCCTGTGGCCACCACACCGCTGCCTGCTGCTCCTaGAAAGGCTCACAACTACTTCTAGGGGACACACAA | + |
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Preference number: 3 (lower is better) Translates to: SACGHHTAACCS*KGSQLLLGDTQ Trigger: TTGTGTGTCCCCTAGAAGTAGTTGTGAGCCTTTGCAGGAGCAGCAGGCAGCGGTGTGGTGGCCACAGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR CCA 72 bp | AATACCAGGGACACGAGTATGAGAGGATGCCCTTTCTaGGGAAGGCTAACATCTCCTGGGGCAGTCCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: NTRDTSMRGCPF*GRLTSPGAVPG Trigger: GCCAGGGACTGCCCCAGGAGATGTTAGCCTTCCCCAGAAAGGGCATCCTCTCATACTCGTGTCCCTGGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| 3UTR CCA 72 bp | CCTAACTCTAGTCCCAGAGGAGCTGATGCCCTCTTCTaGCCTCAGAGTGAACCAGGCATGCATGTGGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PNSSPRGADALF*PQSEPGMHVVH Trigger: ATGCACCACATGCATGCCTGGTTCACTCTGAGGCCAGAAGAGGGCATCAGCTCCTCTGGGACTAGAGTTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| 3UTR TCA 72 bp | AGGCCGTGTGAAACACAGAAGGTGAGGGCTAAGGACTaGAAAGCCTTCCAGGGTCCTGCATCTGACAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RPCETQKVRAKD*KAFQGPASDNQ Trigger: CTGGTTGTCAGATGCAGGACCCTGGAAGGCTTTTCAGTCCTTAGCCCTCACCTTCTGTGTTTCACACGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| 3UTR TCA 72 bp | CTAGGGGACACACAATCCCTTCCCAATGGCACACGATaGCAGCTTTCTGTAAGAAAGGAACGCCCACCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LGDTQSLPNGTR*QLSVRKERPPH Trigger: GTGAGGTGGGCGTTCCTTTCTTACAGAAAGCTGTCATCGTGTGCCATTGGGAAGGGATTGTGTGTCCCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| 3UTR TCA 72 bp | AAAGCTCTGACTCTCCGTGCAGCCTTGTTATTGAGCTaGCTCTCTGCGGGTGGGTACAAAGCCTTTGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KALTLRAALLLS*LSAGGYKAFVS Trigger: GGAGACAAAGGCTTTGTACCCACCCGCAGAGAGTCAGCTCAATAACAAGGCTGCACGGAGAGTCAGAGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCGGGTGGGTACAAAGCCTTTGTCTCCGTGTACTGCTGCTTCTGCTCTTGCCAGAACGTACTTCCGTaGCAAAATCACGGGAACATA | + |
|
Preference number: 3 (lower is better) Translates to: SAGGYKAFVSVYCCFCSCQNVLP*QNHGNI Trigger: TATGTTCCCGTGATTTTGCAACGGAAGTACGTTCTG...GCAAGAGCAGAAGCAGCAGTACACGGAGACAAAGGCTTTGTACCCACCCGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
||
| 3UTR GCA 72 bp | CTGATGCCCTCTTCTGGCCTCAGAGTGAACCAGGCATaGATGTGGTGCATAGATGCACATGCAGACAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LMPSSGLRVNQA*MWCIDAHADKT Trigger: TGTTTTGTCTGCATGTGCATCTATGCACCACATGCATGCCTGGTTCACTCTGAGGCCAGAAGAGGGCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| 3UTR CCA 72 bp | CAGGCTTGCAGGGACGGCCCACGCTCTCTTCTGTGCTaGCTATTTTATGCAGTAGTAGGTTCTAGAATACAG | + |
|
Preference number: 3 (lower is better) Translates to: QACRDGPRSLLC*LFYAVVGSRIQ Trigger: CTGTATTCTAGAACCTACTACTGCATAAAATAGCCAGCACAGAAGAGAGCGTGGGCCGTCCCTGCAAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACCACACCGCTGCCTGCTGCTCCTGCAAAGGCTCACAACTACTTCTAGGGGATATTCATGGTTCTTTTaGACTGAGAGGGGAAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: PPHRCLLLLQRLTTTSRGYSWFF*TERGNF Trigger: AAAGTTTCCCCTCTCAGTCAAAAAGAACCATGAATA...TCCCCTAGAAGTAGTTGTGAGCCTTTGCAGGAGCAGCAGGCAGCGGTGTGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCACAGTTTGCCACACAAGCTCCAAGAAGGGTCAATGCCTGCAGAGCAACGTTGGTGTTGTACTCATTaGTGGCTTTTTCTGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FHSLPHKLQEGSMPAEQRWCCTH*WLFLGG Trigger: CCCTCCCAGAAAAAGCCACAAATGAGTACAACACCA...ACGTTGCTCTGCAGGCATTGACCCTTCTTGGAGCTTGTGTGGCAAACTGTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
||
| 3UTR TCA 72 bp | TGTGGGTTTAAATCTTCGCAACTACCAAGGTTTAGCTaGAGTAAAGCAACCCCATCCCACCCAGCGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CGFKSSQLPRFS*SKATPSHPAGA Trigger: TGCTCCCGCTGGGTGGGATGGGGTTGCTTTACTTCAGCTAAACCTTGGTAGTTGCGAAGATTTAAACCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| 3UTR GCA 72 bp | TCTGCGGGTGGGTACAAAGCCTTTGTCTCCGTGTACTaGTGCTTCTGCTCTTGCAACGATAACTCAATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SAGGYKAFVSVY*CFCSCNDNSIA Trigger: AGCTATTGAGTTATCGTTGCAAGAGCAGAAGCAGCAGTACACGGAGACAAAGGCTTTGTACCCACCCGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCACAGTTTGCCACACAAGCTCCAAGAAGGGTCAATGCCTGCAGAGCAACGTTTGAACTCAGGAGTTTaGGAAGAGAGACAGACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FHSLPHKLQEGSMPAEQRLNSGV*EERQTP Trigger: TGGAGTCTGTCTCTCTTCCAAAACTCCTGAGTTCAA...ACGTTGCTCTGCAGGCATTGACCCTTCTTGGAGCTTGTGTGGCAAACTGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTGCGGGTGGGTACAAAGCCTTTGTCTCCGTGTACTGCTGCTTCTGCTCTTAGATATCAGACTAAATaGGGGGTCCTTCTGGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: SLRVGTKPLSPCTAASALRYQTK*GVLLEF Trigger: GAATTCCAGAAGGACCCCCAATTTAGTCTGATATCT...AAGAGCAGAAGCAGCAGTACACGGAGACAAAGGCTTTGTACCCACCCGCAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
||
| 3UTR TCA 72 bp | CAAGCTCCAAGAAGGGTCAATGCCTGCAGAGCAACGTaGGGGACCTTATGGTTTACCCTTTTCATTATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QAPRRVNACRAT*GTLWFTLFIMA Trigger: AGCCATAATGAAAAGGGTAAACCATAAGGTCCCTCACGTTGCTCTGCAGGCATTGACCCTTCTTGGAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
||
| 3UTR TCA 72 bp | CTCTCTAAGAGTTCCAGGCCAGTCTGGTCTACACAGTaGATTCTAGGACAGATAGGGCTATGTAGAGATACC | + |
|
Preference number: 3 (lower is better) Translates to: LSKSSRPVWSTQ*ILGQIGLCRDT Trigger: GGTATCTCTACATAGCCCTATCTGTCCTAGAATTCACTGTGTAGACCAGACTGGCCTGGAACTCTTAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| 3UTR CCA 72 bp | ACAACTACTTCTAGGGGACACACAATCCCTTCCCAATaGCACACGATGACAGCTTTCTGTAAGAAAGGAACG | + |
|
Preference number: 3 (lower is better) Translates to: TTTSRGHTIPSQ*HTMTAFCKKGT Trigger: CGTTCCTTTCTTACAGAAAGCTGTCATCGTGTGCCATTGGGAAGGGATTGTGTGTCCCCTAGAAGTAGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACACATCCAAGCTGCCTTaGACCAAAAGGTCAACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SVCICSRQEIQRTAPSLDTSKLP*TKRSTS Trigger: TGAAGTTGACCTTTTGGTCAAAGGCAGCTTGGATGT...GTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| 3UTR GCA 72 bp | CCTCAGAGTGAACCAGGCATGCATGTGGTGCATAGATaGACATGCAGACAAAACACCTATAAACCTGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: PQSEPGMHVVHR*TCRQNTYKPET Trigger: TGTTTCAGGTTTATAGGTGTTTTGTCTGCATGTGCATCTATGCACCACATGCATGCCTGGTTCACTCTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACATCCACACTGCTCCACAATATTaGCATTTACATGGTTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CICSRQEIQRTAPSLDIHTAPQY*HLHGFH Trigger: GTGAAAACCATGTAAATGCAAATATTGTGGAGCAGT...GTGGATGTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| 3UTR TCA 72 bp | AAATTACCAAATAAAAAGACAACATTGGCTGACTGTTaGCTTTTCAAACATACTCCACTTAACACCCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KLPNKKTTLADC*LFKHTPLNTQG Trigger: TCCTTGGGTGTTAAGTGGAGTATGTTTGAAAAGTCAACAGTCAGCCAATGTTGTCTTTTTATTTGGTAATTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CCA 90 bp | TCCCACCCAGCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGAGTGGGCCCAGCTGCTGCGGGTaGGTAATGTGCGGGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHPAGAAVATSATPLRSGPSCCG*VMCGMQ Trigger: CTGCATCCCGCACATTACCCACCCGCAGCAGCTGGG...CCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGCTGGGTGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR GCA 90 bp | TCCCACCCAGCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGAGTGGGCACTGGAACCCCAGCTaGTGCGGGTGGGTAATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHPAGAAVATSATPLRSGHWNPS*CGWVMC Trigger: GCACATTACCCACCCGCAGCAGCTGGGGTTCCAGTG...CCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGCTGGGTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGCTAACATCTCCTGGGGCAGTCCCTGGCCCTCGTCTGTCAGAGGACTGGACAGGTGCAGGAACTaGCACTGGAAAGCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKANISWGSPWPSSVRGLDRCRN*HWKASQ Trigger: CTGGCTGGCTTTCCAGTGGCAGTTCCTGCACCTGTC...CAGTCCTCTGACAGACGAGGGCCAGGGACTGCCCCAGGAGATGTTAGCCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR TCA 90 bp | CCCCATCCCACCCAGCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGAGCCTGCAGAGCAACGTaGGGGACCTTATGGTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: PHPTQREQQWPLQQLHLGACRAT*GTLWFT Trigger: GGTAAACCATAAGGTCCCTCACGTTGCTCTGCAGGC...TCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGCTGGGTGGGATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCGCGGCAGCACCCACCTTTGATTCCAGTACTCAGGAGGCAGAGGCAGGTTGACAGTCTGGGAGCCTaGGGAAGGAAAAGTAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RARQHPPLIPVLRRQRQVDSLGA*GRKSNP Trigger: GGGGTTACTTTTCCTTCCGCAGGCTCCCAGACTGTC...AACCTGCCTCTGCCTCCTGAGTACTGGAATCAAAGGTGGGTGCTGCCGCGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR GCA 90 bp | CCCCATCCCACCCAGCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGATGGACTGGATATGTCTaGACTGGAACCCCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PHPTQREQQWPLQQLHLGWTGYV*TGTPAA Trigger: AGCAGCTGGGGTTCCAGTGCAGACATATCCAGTCCA...TCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGCTGGGTGGGATGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCGCGGCAGCACCCACCTTTGATTCCAGTACTCAGGAGGCAGAGGCAGGTTAGCTCTGACTCTCCGTaGAGCCTTGTTATTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RARQHPPLIPVLRRQRQVSSDSP*SLVIEL Trigger: CAGCTCAATAACAAGGCTGCACGGAGAGTCAGAGCT...AACCTGCCTCTGCCTCCTGAGTACTGGAATCAAAGGTGGGTGCTGCCGCGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR CCA 90 bp | GCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGAGTGGGACTGGGAGACTGACTCTCTGCGGGTaGGTACAAAGCCTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGAAVATSATPLRSGTGRLTLCG*VQSLCL Trigger: GAGACAAAGGCTTTGTACCCACCCGCAGAGAGTCAG...TCTCCCAGTCCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR GCA 90 bp | CCCCATCCCACCCAGCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGATTTGTCTCCGTGTACTaGTGCTTCTGCTCTTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PHPTQREQQWPLQQLHLGFVSVY*CFCSCN Trigger: GTTGCAAGAGCAGAAGCAGCAGTACACGGAGACAAA...TCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGCTGGGTGGGATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR CCA 90 bp | TCCCACCCAGCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGAGTGGGAAGTCCAAGAGGTCTTaGGAGTCGGGTTTTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHPAGAAVATSATPLRSGKSKRS*ESGFDS Trigger: AGAGTCAAAACCCGACTCCCAAGACCTCTTGGACTT...CCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGCTGGGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCGCGGCAGCACCCACCTTTGATTCCAGTACTCAGGAGGCAGAGGCAGGTTGACTCCAGTCTTCTGTaGTGTTGTACTCATTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RARQHPPLIPVLRRQRQVDSSLL*CCTHLW Trigger: CCACAAATGAGTACAACACCACAGAAGACTGGAGTC...AACCTGCCTCTGCCTCCTGAGTACTGGAATCAAAGGTGGGTGCTGCCGCGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR CCA 90 bp | GCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGAGTGGGACTGGGAGACAGTCGTTACAAAGTTaGAGGGGAAGAGTCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGAAVATSATPLRSGTGRQSLQS*RGRVLF Trigger: GAACAGGACTCTTCCCCTCCAACTTTGTAACGACTG...TCTCCCAGTCCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR CCA 90 bp | GCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGAGTGGGACTGGGAGATTTCCACCATGCGACTaGACTGGATATGTCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: AGAAVATSATPLRSGTGRFPPCD*TGYVCT Trigger: AGTGCAGACATATCCAGTCCAGTCGCATGGTGGAAA...TCTCCCAGTCCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR TCA 90 bp | TTCAATGATGTCCCGTTTTTGGCAGCAGCCGCGACAGTCTGGGAGCCTGCGGAACGCTTTTCTGACACATaGGAGACCACATCTTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FNDVPFLAAAATVWEPAERFSDT*ETTSCS Trigger: CGAGCAAGATGTGGTCTCTCATGTGTCAGAAAAGCG...TTCCGCAGGCTCCCAGACTGTCGCGGCTGCTGCCAAAAACGGGACATCATTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
||
| CDS-3UTR GCA 90 bp | TCCCACCCAGCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGAGTGGGATGCTCTGGAGAATCTaGAGGGCTCTATCCATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SHPAGAAVATSATPLRSGMLWRI*RALSIL Trigger: TAAAATGGATAGAGCCCTGCAGATTCTCCAGAGCAT...CCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGCTGGGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR GCA 90 bp | CCACCACACCGCTGCCTGCTGCTCCTGCAAAGGCTCACAACTACTTCTAGGGGACTGAGGCAAACCGGATaGTGTGTTCTGGAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPHRCLLLLQRLTTTSRGLRQTG*CVLERR Trigger: TCTTCTTTCCAGAACACAGCATCCGGTTTGCCTCAG...TCCCCTAGAAGTAGTTGTGAGCCTTTGCAGGAGCAGCAGGCAGCGGTGTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CCA 90 bp | GCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGAGTGGGACTGGGAGATTTGGATCTATGCTCTaGAGAATCTGCAGGGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: AGAAVATSATPLRSGTGRFGSML*RICRAL Trigger: TAGAGCCCTGCAGATTCTCCAGAGCATAGATCCAAA...TCTCCCAGTCCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR CCA 90 bp | CCACCACACCGCTGCCTGCTGCTCCTGCAAAGGCTCACAACTACTTCTAGGGGATACCGAGTTCATATTTaGAGGCAGAGATCTCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PPHRCLLLLQRLTTTSRGYRVHI*RQRSQR Trigger: TCGCTGAGATCTCTGCCTCCAAATATGAACTCGGTA...TCCCCTAGAAGTAGTTGTGAGCCTTTGCAGGAGCAGCAGGCAGCGGTGTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CCA 90 bp | GTCACACTAAAGCAACAATTCAACAAAGCCCGACCCGGAAGTAGACAGGAGCCTTGCAGGAACTGCCACTaGAAAGCCAGCCAGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTLKQQFNKARPGSRQEPCRNCH*KASQLR Trigger: CCTCAGCTGGCTGGCTTTCCAGTGGCAGTTCCTGCA...AGGCTCCTGTCTACTTCCGGGTCGGGCTTTGTTGAATTGTTGCTTTAGTGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACCACTGGAACCCCAGCTaGTGCGGGTGGGTAATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVCICSRQEIQRTAPSLDHWNPS*CGWVMC Trigger: GCACATTACCCACCCGCAGCAGCTGGGGTTCCAGTG...GTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCGCGGCAGCACCCACCTTTGATTCCAGTACTCAGGAGGCAGAGGCAGGTTTGTTGTACTCATTTGTaGCTTTTTCCACATCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RARQHPPLIPVLRRQRQVCCTHL*LFPHLA Trigger: AGCAAGATGTGGAAAAAGCCACAAATGAGTACAACA...AACCTGCCTCTGCCTCCTGAGTACTGGAATCAAAGGTGGGTGCTGCCGCGCCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGCAGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCAGCCTGCAGAGCAACGTaGGGGACCTTATGGTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: KCSVCICSRQEIQRTAPSACRAT*GTLWFT Trigger: GGTAAACCATAAGGTCCCTCACGTTGCTCTGCAGGC...TGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACTGCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTTTAGGCAATCTTTTGCTCCACTGGGAGTGCTTCCAACCCTGTCACAGAGGGAGAGCGCTTTTCTaGCACATGAGAGACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: WLLGNLLLHWECFQPCHRGRALF*HMRDHI Trigger: GATGTGGTCTCTCATGTGTCAGAAAAGCGCTCTCCC...TCTGTGACAGGGTTGGAAGCACTCCCAGTGGAGCAAAAGATTGCCTAAAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACTGGATATGTCTGCACTaGAACCCCAGCTGCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVCICSRQEIQRTAPSLDWICLH*NPSCCG Trigger: CCCGCAGCAGCTGGGGTTCCAGTGCAGACATATCCA...GTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR TCA 90 bp | GTGTCTCCTGGCTCAGATTCACTGAGAATCCCTAAGAAGGAAGTGCAGTGTCTGAGTCGTATAAAGCTCTaGCTCTCCGTGCAGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSPGSDSLRIPKKEVQCLSRIKL*LSVQPC Trigger: ACAAGGCTGCACGGAGAGTCAGAGCTTTATACGACT...CAGACACTGCACTTCCTTCTTAGGGATTCTCAGTGAATCTGAGCCAGGAGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR GCA 90 bp | TGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACATCCACGACAGTCTGGGAGCCTaGGGAAGGAAAAGTAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: CICSRQEIQRTAPSLDIHDSLGA*GRKSNP Trigger: GGGGTTACTTTTCCTTCCGCAGGCTCCCAGACTGTC...GTGGATGTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCTTTAAAGAGATTCCAGAGGTGGAGAGGCGGCTCACAACCCTCCCTAACTTTTGTCTCCGTGTACTaGTGCTTCTGCTCTTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KPLKRFQRWRGGSQPSLTFVSVY*CFCSCN Trigger: GTTGCAAGAGCAGAAGCAGCAGTACACGGAGACAAA...AGTTAGGGAGGGTTGTGAGCCGCCTCTCCACCTCTGGAATCTCTTTAAAGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR GCA 90 bp | AGAACATCCAAGCTGCCTTTGACCAAAAGGTCAACTTCAAGCCAACTGGACTGGTGGACTGGATATGTCTaGACTGGAACCCCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTSKLPLTKRSTSSQLDWWTGYV*TGTPAA Trigger: AGCAGCTGGGGTTCCAGTGCAGACATATCCAGTCCA...CCAGTCCAGTTGGCTTGAAGTTGACCTTTTGGTCAAAGGCAGCTTGGATGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CCA 90 bp | CCACCACACCGCTGCCTGCTGCTCCTGCAAAGGCTCACAACTACTTCTAGGGGATGTTGTACTCATTTGTaGCTTTTTCCACATCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPHRCLLLLQRLTTTSRGCCTHL*LFPHLA Trigger: AGCAAGATGTGGAAAAAGCCACAAATGAGTACAACA...TCCCCTAGAAGTAGTTGTGAGCCTTTGCAGGAGCAGCAGGCAGCGGTGTGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CCA 90 bp | AGAACATCCAAGCTGCCTTTGACCAAAAGGTCAACTTCAAGCCAACTGGACTGGCTGACTCTCTGCGGGTaGGTACAAAGCCTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTSKLPLTKRSTSSQLDWLTLCG*VQSLCL Trigger: GAGACAAAGGCTTTGTACCCACCCGCAGAGAGTCAG...CCAGTCCAGTTGGCTTGAAGTTGACCTTTTGGTCAAAGGCAGCTTGGATGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CCA 90 bp | CTTCGCAACTACCAAGGTTTAGCTGAAGTAAAGCAACCCCATCCCACCCAGCGGTACCGAGTTCATATTTaGAGGCAGAGATCTCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LRNYQGLAEVKQPHPTQRYRVHI*RQRSQR Trigger: TCGCTGAGATCTCTGCCTCCAAATATGAACTCGGTA...CCGCTGGGTGGGATGGGGTTGCTTTACTTCAGCTAAACCTTGGTAGTTGCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| CDS-3UTR GCA 90 bp | AGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACTTGCTCCACTGGGAGTaGTTCCAACCCTGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVCICSRQEIQRTAPSLDLLHWE*FQPCHR Trigger: TCTGTGACAGGGTTGGAAGCACTCCCAGTGGAGCAA...GTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CCA 90 bp | GTCACACTAAAGCAACAATTCAACAAAGCCCGACCCGGAAGTAGACAGGAGCCTTCATGTAAGAAGGGTTaGAGACAGTGTCCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTLKQQFNKARPGSRQEPSCKKG*RQCPVQ Trigger: CTGGACAGGACACTGTCTCCAACCCTTCTTACATGA...AGGCTCCTGTCTACTTCCGGGTCGGGCTTTGTTGAATTGTTGCTTTAGTGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGTCCATGATCAGACTCCAGTCTTCTGTGGTGTTGTACTCATTTGTGGCTAGGGGTGTAGCAGAGTaGGAGAGCGCTTTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QMSMIRLQSSVVLYSFVARGVAE*ESAFLT Trigger: TGTCAGAAAAGCGCTCTCCCACTCTGCTACACCCCT...AGCCACAAATGAGTACAACACCACAGAAGACTGGAGTCTGATCATGGACATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
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| 3UTR CAA 72 bp | CAGATGTCCATGATCAGACTCCAGTCTTCTGTGGTGTaGTACTCATTTGTGGCTTTTTCTGGGAGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QMSMIRLQSSVV*YSFVAFSGRVR Trigger: CCTCACCCTCCCAGAAAAAGCCACAAATGAGTACAACACCACAGAAGACTGGAGTCTGATCATGGACATCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
||
| CDS-3UTR GCA 90 bp | TGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACATCCACAGCTCTGACTCTCCGTaGAGCCTTGTTATTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CICSRQEIQRTAPSLDIHSSDSP*SLVIEL Trigger: CAGCTCAATAACAAGGCTGCACGGAGAGTCAGAGCT...GTGGATGTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGCAGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCAAAGTCCAAGAGGTCTTaGGAGTCGGGTTTTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCSVCICSRQEIQRTAPSKSKRS*ESGFDS Trigger: AGAGTCAAAACCCGACTCCCAAGACCTCTTGGACTT...TGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACTGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR GCA 90 bp | CTTCGCAACTACCAAGGTTTAGCTGAAGTAAAGCAACCCCATCCCACCCAGCGGTCAGACAGTTCTGAATaGTTCCTATCAATCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRNYQGLAEVKQPHPTQRSDSSE*FLSISS Trigger: TGAAGAGATTGATAGGAAGCATTCAGAACTGTCTGA...CCGCTGGGTGGGATGGGGTTGCTTTACTTCAGCTAAACCTTGGTAGTTGCGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGCAGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCAGACTCCAGTCTTCTGTaGTGTTGTACTCATTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KCSVCICSRQEIQRTAPSDSSLL*CCTHLW Trigger: CCACAAATGAGTACAACACCACAGAAGACTGGAGTC...TGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACTGCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACAATCTTTTGCTCCACTaGGAGTGCTTCCAACCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVCICSRQEIQRTAPSLDNLLLH*ECFQPC Trigger: ACAGGGTTGGAAGCACTCCCAGTGGAGCAAAAGATT...GTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CCA 90 bp | TGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACATCCACCAGTCGTTACAAAGTTaGAGGGGAAGAGTCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CICSRQEIQRTAPSLDIHQSLQS*RGRVLF Trigger: GAACAGGACTCTTCCCCTCCAACTTTGTAACGACTG...GTGGATGTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGCAGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTTGGATCTATGCTCTaGAGAATCTGCAGGGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KCSVCICSRQEIQRTAPSFGSML*RICRAL Trigger: TAGAGCCCTGCAGATTCTCCAGAGCATAGATCCAAA...TGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACTGCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CCA 90 bp | TGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACATCCACATCGGACCCATCTGTTaGCAAACATCTTCCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CICSRQEIQRTAPSLDIHIGPIC*QTSSKS Trigger: GGACTTGGAAGATGTTTGCCAACAGATGGGTCCGAT...GTGGATGTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CCA 90 bp | TGTAAATATCATGGATCCGAGTCCTGTGCATCTATGTTTTCTAGTTTATGTTGTCCCAGCTGCTGCGGGTaGGTAATGTGCGGGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CKYHGSESCASMFSSLCCPSCCG*VMCGMQ Trigger: CTGCATCCCGCACATTACCCACCCGCAGCAGCTGGG...ACAACATAAACTAGAAAACATAGATGCACAGGACTCGGATCCATGATATTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CCA 90 bp | TGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACATCCACTTTCCACCATGCGACTaGACTGGATATGTCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CICSRQEIQRTAPSLDIHFPPCD*TGYVCT Trigger: AGTGCAGACATATCCAGTCCAGTCGCATGGTGGAAA...GTGGATGTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CCA 90 bp | AGAACATCCAAGCTGCCTTTGACCAAAAGGTCAACTTCAAGCCAACTGGACTGGCCGGATGCTGTGTTCTaGAAAGAAGACACATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RTSKLPLTKRSTSSQLDWPDAVF*KEDTSV Trigger: TACAGATGTGTCTTCTTTCCAGAACACAGCATCCGG...CCAGTCCAGTTGGCTTGAAGTTGACCTTTTGGTCAAAGGCAGCTTGGATGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGCAGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCAATGCTCTGGAGAATCTaGAGGGCTCTATCCATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KCSVCICSRQEIQRTAPSMLWRI*RALSIL Trigger: TAAAATGGATAGAGCCCTGCAGATTCTCCAGAGCAT...TGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACTGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR TCA 90 bp | AGAACATCCAAGCTGCCTTTGACCAAAAGGTCAACTTCAAGCCAACTGGACTGGTTTGTTTTTGTTCAATaGTGTCCCGTTTTTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTSKLPLTKRSTSSQLDWFVFVQ*CPVFGS Trigger: GCTGCCAAAAACGGGACATCATTGAACAAAAACAAA...CCAGTCCAGTTGGCTTGAAGTTGACCTTTTGGTCAAAGGCAGCTTGGATGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR GCA 90 bp | TGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACATCCACAGAACGTACTTCCGTTaGAAAATCACGGGAACATAC | + |
|
Preference number: 4 (lower is better) Translates to: CICSRQEIQRTAPSLDIHRTYFR*KITGTY Trigger: GTATGTTCCCGTGATTTTGCAACGGAAGTACGTTCT...GTGGATGTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CCA 90 bp | ATAGGGCTATGTAGAGATACCATCTCCAACAATCAAACAACGACAAAAGTAAATTGGATATGTCTGCACTaGAACCCCAGCTGCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IGLCRDTISNNQTTTKVNWICLH*NPSCCG Trigger: CCCGCAGCAGCTGGGGTTCCAGTGCAGACATATCCA...ATTTACTTTTGTCGTTGTTTGATTGTTGGAGATGGTATCTCTACATAGCCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| CDS-3UTR TCA 90 bp | TGTAAATATCATGGATCCGAGTCCTGTGCATCTATGTTTTCTAGTTTATGTTGTGCCTTGTTATTGAGCTaGCTCTCTGCGGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CKYHGSESCASMFSSLCCALLLS*LSAGGY Trigger: GTACCCACCCGCAGAGAGTCAGCTCAATAACAAGGC...ACAACATAAACTAGAAAACATAGATGCACAGGACTCGGATCCATGATATTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR TCA 90 bp | TCAAACAACGACAAAAGTAAATGTTGGAAATATTACTGCAAGGAGAAGAGTCTGGCCTTGTTATTGAGCTaGCTCTCTGCGGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SNNDKSKCWKYYCKEKSLALLLS*LSAGGY Trigger: GTACCCACCCGCAGAGAGTCAGCTCAATAACAAGGC...CAGACTCTTCTCCTTGCAGTAATATTTCCAACATTTACTTTTGTCGTTGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| CDS-3UTR GCA 90 bp | TCAAACAACGACAAAAGTAAATGTTGGAAATATTACTGCAAGGAGAAGAGTCTGTTGCTCCACTGGGAGTaGTTCCAACCCTGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SNNDKSKCWKYYCKEKSLLLHWE*FQPCHR Trigger: TCTGTGACAGGGTTGGAAGCACTCCCAGTGGAGCAA...CAGACTCTTCTCCTTGCAGTAATATTTCCAACATTTACTTTTGTCGTTGTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| CDS-3UTR TCA 90 bp | ATAGGGCTATGTAGAGATACCATCTCCAACAATCAAACAACGACAAAAGTAAATAGTCGTATAAAGCTCTaGCTCTCCGTGCAGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IGLCRDTISNNQTTTKVNSRIKL*LSVQPC Trigger: ACAAGGCTGCACGGAGAGTCAGAGCTTTATACGACT...ATTTACTTTTGTCGTTGTTTGATTGTTGGAGATGGTATCTCTACATAGCCCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| CDS-3UTR TCA 90 bp | TGTAAATATCATGGATCCGAGTCCTGTGCATCTATGTTTTCTAGTTTATGTTGTTGTCACAGATGTCCATaGTCAGACTCCAGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CKYHGSESCASMFSSLCCCHRCP*SDSSLL Trigger: CAGAAGACTGGAGTCTGATCATGGACATCTGTGACA...ACAACATAAACTAGAAAACATAGATGCACAGGACTCGGATCCATGATATTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR TCA 90 bp | ATAGGGCTATGTAGAGATACCATCTCCAACAATCAAACAACGACAAAAGTAAATTGTCACAGATGTCCATaGTCAGACTCCAGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IGLCRDTISNNQTTTKVNCHRCP*SDSSLL Trigger: CAGAAGACTGGAGTCTGATCATGGACATCTGTGACA...ATTTACTTTTGTCGTTGTTTGATTGTTGGAGATGGTATCTCTACATAGCCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| CDS-3UTR CCA 90 bp | ATAGGGCTATGTAGAGATACCATCTCCAACAATCAAACAACGACAAAAGTAAATATCGGACCCATCTGTTaGCAAACATCTTCCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IGLCRDTISNNQTTTKVNIGPIC*QTSSKS Trigger: GGACTTGGAAGATGTTTGCCAACAGATGGGTCCGAT...ATTTACTTTTGTCGTTGTTTGATTGTTGGAGATGGTATCTCTACATAGCCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| CDS-3UTR CCA 90 bp | TGTAAATATCATGGATCCGAGTCCTGTGCATCTATGTTTTCTAGTTTATGTTGTAATTGGGGGTCCTTCTaGAATTCTTCTGACCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: CKYHGSESCASMFSSLCCNWGSF*NSSDHS Trigger: GGAATGGTCAGAAGAATTCCAGAAGGACCCCCAATT...ACAACATAAACTAGAAAACATAGATGCACAGGACTCGGATCCATGATATTTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CCA 90 bp | ATAGGGCTATGTAGAGATACCATCTCCAACAATCAAACAACGACAAAAGTAAATAATTGGGGGTCCTTCTaGAATTCTTCTGACCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: IGLCRDTISNNQTTTKVNNWGSF*NSSDHS Trigger: GGAATGGTCAGAAGAATTCCAGAAGGACCCCCAATT...ATTTACTTTTGTCGTTGTTTGATTGTTGGAGATGGTATCTCTACATAGCCCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR GCA 90 bp | TGTAAATATCATGGATCCGAGTCCTGTGCATCTATGTTTTCTAGTTTATGTTGTTGCTGCTTCTGCTCTTaGAACGATAACTCAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CKYHGSESCASMFSSLCCCCFCS*NDNSIA Trigger: AGCTATTGAGTTATCGTTGCAAGAGCAGAAGCAGCA...ACAACATAAACTAGAAAACATAGATGCACAGGACTCGGATCCATGATATTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR GCA 90 bp | TCAAACAACGACAAAAGTAAATGTTGGAAATATTACTGCAAGGAGAAGAGTCTGTGCTGCTTCTGCTCTTaGAACGATAACTCAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNNDKSKCWKYYCKEKSLCCFCS*NDNSIA Trigger: AGCTATTGAGTTATCGTTGCAAGAGCAGAAGCAGCA...CAGACTCTTCTCCTTGCAGTAATATTTCCAACATTTACTTTTGTCGTTGTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR GCA 90 bp | TGTAAATATCATGGATCCGAGTCCTGTGCATCTATGTTTTCTAGTTTATGTTGTTCAGACAGTTCTGAATaGTTCCTATCAATCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CKYHGSESCASMFSSLCCSDSSE*FLSISS Trigger: TGAAGAGATTGATAGGAAGCATTCAGAACTGTCTGA...ACAACATAAACTAGAAAACATAGATGCACAGGACTCGGATCCATGATATTTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS GCA 90 bp | CTGGTGGTAGCTTGCTTGTGGCTGTGCAGCGACAGGTGCAGGAACTaGCACTGGAAAGCCAGCCAGCTGAGGCAAACCGGATGCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LVVACLWLCSDRCRN*HWKASQLRQTGCCV Trigger: AACACAGCATCCGGTTTGCCTCAGCTGGCTGGCTTTCCAGTGGCAGTTCCTGCACCTGTCGCTGCACAGCCACAAGCAAGCTACCACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS CCA 90 bp | GTAGCTTGCTTGTGGCTGTGCAGCGACAGGTGCAGGAACTGCCACTaGAAAGCCAGCCAGCTGAGGCAAACCGGATGCTGTGTTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VACLWLCSDRCRNCH*KASQLRQTGCCVLE Trigger: TTCCAGAACACAGCATCCGGTTTGCCTCAGCTGGCTGGCTTTCCAGTGGCAGTTCCTGCACCTGTCGCTGCACAGCCACAAGCAAGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CAA 90 bp | TCCCACCCAGCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGAGTGGGTCAGTCGTTACAAAGTaGGAGGGGAAGAGTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SHPAGAAVATSATPLRSGSVVTK*EGKSPV Trigger: AACAGGACTCTTCCCCTCCAACTTTGTAACGACTGA...CCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGCTGGGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| CDS-3UTR CAA 90 bp | GCGGGCGCGGCAGCACCCACCTTTGATTCCAGTACTCAGGAGGCAGAGGCAGGTCGGGTTTTGACTCTTTaGGATCTATGCTCTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AGAAAPTFDSSTQEAEAGRVLTL*DLCSGE Trigger: TTCTCCAGAGCATAGATCCAAAAGAGTCAAAACCCG...ACCTGCCTCTGCCTCCTGAGTACTGGAATCAAAGGTGGGTGCTGCCGCGCCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGCTAACATCTCCTGGGGCAGTCCCTGGCCCTCGTCTGTCAGAGGACTGCAGAACGTACTTCCGTaGCAAAATCACGGGAACATA | + |
|
Preference number: 5 (lower is better) Translates to: GKANISWGSPWPSSVRGLQNVLP*QNHGNI Trigger: TATGTTCCCGTGATTTTGCAACGGAAGTACGTTCTG...CAGTCCTCTGACAGACGAGGGCCAGGGACTGCCCCAGGAGATGTTAGCCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CAA 90 bp | TCCCACCCAGCGGGAGCAGCAGTGGCCACTTCAGCAACTCCACTTAGGAGTGGGTTAAAGGTGAGCTCGTaGTCCTCAACAGCTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SHPAGAAVATSATPLRSGLKVSS*SSTASK Trigger: CTTTGAAGCTGTTGAGGACAACGAGCTCACCTTTAA...CCCACTCCTAAGTGGAGTTGCTGAAGTGGCCACTGCTGCTCCCGCTGGGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS TCA 90 bp | TGTGCAGCGACAGGTGCAGGAACTGCCACTGGAAAGCCAGCCAGCTaGGGCAAACCGGATGCTGTGTTCTGGAAAGAAGACACATCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: CAATGAGTATGKPAS*GKPDAVFWKEDTSV Trigger: TACAGATGTGTCTTCTTTCCAGAACACAGCATCCGGTTTGCCTCAGCTGGCTGGCTTTCCAGTGGCAGTTCCTGCACCTGTCGCTGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CAA 90 bp | CCACCACACCGCTGCCTGCTGCTCCTGCAAAGGCTCACAACTACTTCTAGGGGATCATTCACCAACTTATaGTACAGGTCCAGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPHRCLLLLQRLTTTSRGSFTNL*YRSRAS Trigger: GGAAGCCCTGGACCTGTACAATAAGTTGGTGAATGA...TCCCCTAGAAGTAGTTGTGAGCCTTTGCAGGAGCAGCAGGCAGCGGTGTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
||
| CDS-3UTR CAA 90 bp | CTTCGCAACTACCAAGGTTTAGCTGAAGTAAAGCAACCCCATCCCACCCAGCGGGGCTTTTTCCACATCTaGCTCGAACGGGTTGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRNYQGLAEVKQPHPTQRGFFHI*LERVGS Trigger: ACTGCCAACCCGTTCGAGCAAGATGTGGAAAAAGCC...CCGCTGGGTGGGATGGGGTTGCTTTACTTCAGCTAAACCTTGGTAGTTGCGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR CAA 90 bp | CGGGCGCGGCAGCACCCACCTTTGATTCCAGTACTCAGGAGGCAGAGGCAGGTTTCAATTACATTCAATTaGTCCACCGTTGCTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RARQHPPLIPVLRRQRQVSITFN*STVAVS Trigger: TGAGACAGCAACGGTGGACAAATTGAATGTAATTGA...AACCTGCCTCTGCCTCCTGAGTACTGGAATCAAAGGTGGGTGCTGCCGCGCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACCTGGTGGTAGCTTGCTaGTGGCTGTGCAGCGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVCICSRQEIQRTAPSLDLVVAC*WLCSDR Trigger: CCTGTCGCTGCACAGCCACAAGCAAGCTACCACCAG...GTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS GCA 90 bp | GATCAGGTCCTAGGTTATAGTTCTGGGCAACAGATACTTGGTGAATaGCGTGGCCCAGGTAGTTTCCACCATGCGACTGGACTGGATATG | + |
|
Preference number: 5 (lower is better) Translates to: DQVLGYSSGQQILGE*RGPGSFHHATGLDM Trigger: CATATCCAGTCCAGTCGCATGGTGGAAACTACCTGGGCCACGGCATTCACCAAGTATCTGTTGCCCAGAACTATAACCTAGGACCTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS-3UTR CAA 90 bp | AGAAAGGAACGCCCACCTCACACTGATACCCATGATGGTTCCTATCACATCAGGGGCTTTTTCCACATCTaGCTCGAACGGGTTGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RKERPPHTDTHDGSYHIRGFFHI*LERVGS Trigger: ACTGCCAACCCGTTCGAGCAAGATGTGGAAAAAGCC...CCTGATGTGATAGGAACCATCATGGGTATCAGTGTGAGGTGGGCGTTCCTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS GCA 90 bp | AGCTCTGGTTCATGTAAGAAGGGTTGGAGACAGTGTCCTGTCCAGTaGTTAAGTATGGAGGTTGGACGGTGTGTGCTGTTACCGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSGSCKKGWRQCPVQ*LSMEVGRCVLLPSS Trigger: TGAACTCGGTAACAGCACACACCGTCCAACCTCCATACTTAAGCACTGGACAGGACACTGTCTCCAACCCTTCTTACATGAACCAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CAA 90 bp | CTTCGCAACTACCAAGGTTTAGCTGAAGTAAAGCAACCCCATCCCACCCAGCGGAGATATCAGACTAAATaGGGGGTCCTTCTGGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LRNYQGLAEVKQPHPTQRRYQTK*GVLLEF Trigger: GAATTCCAGAAGGACCCCCAATTTAGTCTGATATCT...CCGCTGGGTGGGATGGGGTTGCTTTACTTCAGCTAAACCTTGGTAGTTGCGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| CDS TCA 90 bp | TTGGCAAACATCTTCCAAGTCCAAGAGGTCTTGGGAGTCGGGTTTTaGCTCTTTTGGATCTATGCTCTGGAGAATCTGCAGGGCTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: LANIFQVQEVLGVGF*LFWIYALENLQGSI Trigger: GATAGAGCCCTGCAGATTCTCCAGAGCATAGATCCAAAAGAGTCAAAACCCGACTCCCAAGACCTCTTGGACTTGGAAGATGTTTGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS-3UTR CAA 90 bp | AAGTGCAGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATCAGTCGTTACAAAGTaGGAGGGGAAGAGTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KCSVCICSRQEIQRTAPSSVVTK*EGKSPV Trigger: AACAGGACTCTTCCCCTCCAACTTTGTAACGACTGA...TGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACTGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CAA 90 bp | AAGTGCAGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCAATATCTTTCCACAGTTaGCCACACAAGCTCCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KCSVCICSRQEIQRTAPSISFHS*PHKLQE Trigger: TTCTTGGAGCTTGTGTGGCAAACTGTGGAAAGATAT...TGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACTGCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CAA 90 bp | TGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACATCCACTTAAAGGTGAGCTCGTaGTCCTCAACAGCTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CICSRQEIQRTAPSLDIHLKVSS*SSTASK Trigger: CTTTGAAGCTGTTGAGGACAACGAGCTCACCTTTAA...GTGGATGTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CAA 90 bp | AGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACCGGGTTTTGACTCTTTaGGATCTATGCTCTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVCICSRQEIQRTAPSLDRVLTL*DLCSGE Trigger: TTCTCCAGAGCATAGATCCAAAAGAGTCAAAACCCG...GTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS TCA 90 bp | CAGGTCCAGGGCTTCCAGCACCTTTACGTTCAACTCAGACAGTTCTaGATGCTTCCTATCAATCTCTTCAAGTTTTTCATCTATCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: QVQGFQHLYVQLRQF*MLPINLFKFFIYHR Trigger: CCGATGATAGATGAAAAACTTGAAGAGATTGATAGGAAGCATTCAGAACTGTCTGAGTTGAACGTAAAGGTGCTGGAAGCCCTGGACCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS GCA 90 bp | CATCAATTACATTCAATTTGTCCACCGTTGCTGTCTCAACCTCTGTaGTTAAGTCAGTCGTTACAAAGTTGGAGGGGAAGAGTCCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HQLHSICPPLLSQPL*LSQSLQSWRGRVLF Trigger: GAACAGGACTCTTCCCCTCCAACTTTGTAACGACTGACTTAAGCACAGAGGTTGAGACAGCAACGGTGGACAAATTGAATGTAATTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS GCA 90 bp | TCCAGGGCTTCCAGCACCTTTACGTTCAACTCAGACAGTTCTGAATaGTTCCTATCAATCTCTTCAAGTTTTTCATCTATCATCGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: SRASSTFTFNSDSSE*FLSISSSFSSIIGP Trigger: GGGTCCGATGATAGATGAAAAACTTGAAGAGATTGATAGGAAGCATTCAGAACTGTCTGAGTTGAACGTAAAGGTGCTGGAAGCCCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS-3UTR CAA 90 bp | AGTGTCTGCATATGTAGCAGGCAGGAAATCCAAAGGACAGCACCTTCATTAGACAGATATCAGACTAAATaGGGGGTCCTTCTGGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: SVCICSRQEIQRTAPSLDRYQTK*GVLLEF Trigger: GAATTCCAGAAGGACCCCCAATTTAGTCTGATATCT...GTCTAATGAAGGTGCTGTCCTTTGGATTTCCTGCCTGCTACATATGCAGACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CAA 90 bp | AGAACATCCAAGCTGCCTTTGACCAAAAGGTCAACTTCAAGCCAACTGGACTGGTCAATTACATTCAATTaGTCCACCGTTGCTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTSKLPLTKRSTSSQLDWSITFN*STVAVS Trigger: TGAGACAGCAACGGTGGACAAATTGAATGTAATTGA...CCAGTCCAGTTGGCTTGAAGTTGACCTTTTGGTCAAAGGCAGCTTGGATGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CAA 90 bp | ATAGGGCTATGTAGAGATACCATCTCCAACAATCAAACAACGACAAAAGTAAATTCATTCACCAACTTATaGTACAGGTCCAGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IGLCRDTISNNQTTTKVNSFTNL*YRSRAS Trigger: GGAAGCCCTGGACCTGTACAATAAGTTGGTGAATGA...ATTTACTTTTGTCGTTGTTTGATTGTTGGAGATGGTATCTCTACATAGCCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| CDS-3UTR CAA 90 bp | TGTAAATATCATGGATCCGAGTCCTGTGCATCTATGTTTTCTAGTTTATGTTGTTGGTGTTGTACTCATTaGTGGCTTTTTCCACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: CKYHGSESCASMFSSLCCWCCTH*WLFPHL Trigger: AAGATGTGGAAAAAGCCACAAATGAGTACAACACCA...ACAACATAAACTAGAAAACATAGATGCACAGGACTCGGATCCATGATATTTACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS-3UTR CAA 90 bp | TCAAACAACGACAAAAGTAAATGTTGGAAATATTACTGCAAGGAGAAGAGTCTGTGGTGTTGTACTCATTaGTGGCTTTTTCCACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SNNDKSKCWKYYCKEKSLWCCTH*WLFPHL Trigger: AAGATGTGGAAAAAGCCACAAATGAGTACAACACCA...CAGACTCTTCTCCTTGCAGTAATATTTCCAACATTTACTTTTGTCGTTGTTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127316.8 |
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| CDS GCA 72 bp | GCTTGCTTGTGGCTGTGCAGCGACAGGTGCAGGAACTaGCACTGGAAAGCCAGCCAGCTGAGGCAAACCGGA | + |
|
Preference number: 6 (lower is better) Translates to: ACLWLCSDRCRN*HWKASQLRQTG Trigger: TCCGGTTTGCCTCAGCTGGCTGGCTTTCCAGTGGCAGTTCCTGCACCTGTCGCTGCACAGCCACAAGCAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS GCA 72 bp | CTGGTGGTAGCTTGCTTGTGGCTGTGCAGCGACAGGTaGAGGAACTGCCACTGGAAAGCCAGCCAGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LVVACLWLCSDR*RNCHWKASQLR Trigger: CCTCAGCTGGCTGGCTTTCCAGTGGCAGTTCCTGCACCTGTCGCTGCACAGCCACAAGCAAGCTACCACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS CCA 72 bp | TTGTGGCTGTGCAGCGACAGGTGCAGGAACTGCCACTaGAAAGCCAGCCAGCTGAGGCAAACCGGATGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LWLCSDRCRNCH*KASQLRQTGCC Trigger: ACAGCATCCGGTTTGCCTCAGCTGGCTGGCTTTCCAGTGGCAGTTCCTGCACCTGTCGCTGCACAGCCACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS TCA 72 bp | ACAGGTGCAGGAACTGCCACTGGAAAGCCAGCCAGCTaGGGCAAACCGGATGCTGTGTTCTGGAAAGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: TGAGTATGKPAS*GKPDAVFWKED Trigger: GTCTTCTTTCCAGAACACAGCATCCGGTTTGCCTCAGCTGGCTGGCTTTCCAGTGGCAGTTCCTGCACCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS TCA 72 bp | GGGTGTAGCAGAGTGGGAGAGCGCTTTTCTGACACATaGGAGACCACATCTTGCTCGAACGGGTTGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GCSRVGERFSDT*ETTSCSNGLAV Trigger: CACTGCCAACCCGTTCGAGCAAGATGTGGTCTCTCATGTGTCAGAAAAGCGCTCTCCCACTCTGCTACACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155516.2 |
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| CDS GCA 72 bp | CCCCACAGGCTGTGTGTAAGCAGCTGTACCAGCAGCTaGCTGAAGACGAGAGCTCTGGTTCATGTAAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PHRLCVSSCTSS*LKTRALVHVRR Trigger: CCTTCTTACATGAACCAGAGCTCTCGTCTTCAGGCAGCTGCTGGTACAGCTGCTTACACACAGCCTGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS CAA 72 bp | CAGCTGCTGCGGGTGGGTAATGTGCGGGATGCAGCTTaGAATAGACCGAGTACACAGGCGCTTCATTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: QLLRVGNVRDAA*NRPSTQALHSP Trigger: TGGTGAATGAAGCGCCTGTGTACTCGGTCTATTCAAAGCTGCATCCCGCACATTACCCACCCGCAGCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS CAA 90 bp | CTGGAACCCCAGCTGCTGCGGGTGGGTAATGTGCGGGATGCAGCTTaGAATAGACCGAGTACACAGGCGCTTCATTCACCAACTTATTGT | + |
|
Preference number: 6 (lower is better) Translates to: LEPQLLRVGNVRDAA*NRPSTQALHSPTYC Trigger: ACAATAAGTTGGTGAATGAAGCGCCTGTGTACTCGGTCTATTCAAAGCTGCATCCCGCACATTACCCACCCGCAGCAGCTGGGGTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS GCA 72 bp | CTAGGTTATAGTTCTGGGCAACAGATACTTGGTGAATaGCGTGGCCCAGGTAGTTTCCACCATGCGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGYSSGQQILGE*RGPGSFHHATG Trigger: TCCAGTCGCATGGTGGAAACTACCTGGGCCACGGCATTCACCAAGTATCTGTTGCCCAGAACTATAACCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS GCA 72 bp | TCATGTAAGAAGGGTTGGAGACAGTGTCCTGTCCAGTaGTTAAGTATGGAGGTTGGACGGTGTGTGCTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SCKKGWRQCPVQ*LSMEVGRCVLL Trigger: TAACAGCACACACCGTCCAACCTCCATACTTAAGCACTGGACAGGACACTGTCTCCAACCCTTCTTACATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102759.8 |
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| CDS CCA 72 bp | TCAGACTCCAGTCTTCTGTGGTGTTGTACTCATTTGTaGCTTTTTCCACATCTTGCTCGAACGGGTTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SDSSLLWCCTHL*LFPHLARTGWQ Trigger: CTGCCAACCCGTTCGAGCAAGATGTGGAAAAAGCCACAAATGAGTACAACACCACAGAAGACTGGAGTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS CAA 90 bp | ACCCTGTCACAGATGTCCATGATCAGACTCCAGTCTTCTGTGGTGTaGTACTCATTTGTGGCTTTTTCCACATCTTGCTCGAACGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TLSQMSMIRLQSSVV*YSFVAFSTSCSNGL Trigger: CAACCCGTTCGAGCAAGATGTGGAAAAAGCCACAAATGAGTACAACACCACAGAAGACTGGAGTCTGATCATGGACATCTGTGACAGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS CAA 90 bp | GTTGGCAAACATCTTCCAAGTCCAAGAGGTCTTGGGAGTCGGGTTTaGACTCTTTTGGATCTATGCTCTGGAGAATCTGCAGGGCTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: VGKHLPSPRGLGSRV*TLLDLCSGESAGLY Trigger: ATAGAGCCCTGCAGATTCTCCAGAGCATAGATCCAAAAGAGTCAAAACCCGACTCCCAAGACCTCTTGGACTTGGAAGATGTTTGCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS CAA 90 bp | CATCTTCCAAGTCCAAGAGGTCTTGGGAGTCGGGTTTTGACTCTTTaGGATCTATGCTCTGGAGAATCTGCAGGGCTCTATCCATTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: HLPSPRGLGSRVLTL*DLCSGESAGLYPFY Trigger: GTAAAATGGATAGAGCCCTGCAGATTCTCCAGAGCATAGATCCAAAAGAGTCAAAACCCGACTCCCAAGACCTCTTGGACTTGGAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS TCA 72 bp | ATCTTCCAAGTCCAAGAGGTCTTGGGAGTCGGGTTTTaGCTCTTTTGGATCTATGCTCTGGAGAATCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IFQVQEVLGVGF*LFWIYALENLQ Trigger: CTGCAGATTCTCCAGAGCATAGATCCAAAAGAGTCAAAACCCGACTCCCAAGACCTCTTGGACTTGGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS CAA 72 bp | CATCTTCCAAGTCCAAGAGGTCTTGGGAGTCGGGTTTaGACTCTTTTGGATCTATGCTCTGGAGAATCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: HLPSPRGLGSRV*TLLDLCSGESA Trigger: TGCAGATTCTCCAGAGCATAGATCCAAAAGAGTCAAAACCCGACTCCCAAGACCTCTTGGACTTGGAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS CCA 72 bp | ATCTGTTGGCAAACATCTTCCAAGTCCAAGAGGTCTTaGGAGTCGGGTTTTGACTCTTTTGGATCTATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ICWQTSSKSKRS*ESGFDSFGSML Trigger: GAGCATAGATCCAAAAGAGTCAAAACCCGACTCCCAAGACCTCTTGGACTTGGAAGATGTTTGCCAACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS CAA 72 bp | CAGATGTCCATGATCAGACTCCAGTCTTCTGTGGTGTaGTACTCATTTGTGGCTTTTTCCACATCTTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QMSMIRLQSSVV*YSFVAFSTSCS Trigger: CGAGCAAGATGTGGAAAAAGCCACAAATGAGTACAACACCACAGAAGACTGGAGTCTGATCATGGACATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS CAA 72 bp | CTCTTCAAGTTTTTCATCTATCATCGGACCCATCTGTaGGCAAACATCTTCCAAGTCCAAGAGGTCTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LFKFFIYHRTHL*ANIFQVQEVLG Trigger: TCCCAAGACCTCTTGGACTTGGAAGATGTTTGCCAACAGATGGGTCCGATGATAGATGAAAAACTTGAAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS TCA 72 bp | GGCTTCCAGCACCTTTACGTTCAACTCAGACAGTTCTaGATGCTTCCTATCAATCTCTTCAAGTTTTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: GFQHLYVQLRQF*MLPINLFKFFI Trigger: GATGAAAAACTTGAAGAGATTGATAGGAAGCATTCAGAACTGTCTGAGTTGAACGTAAAGGTGCTGGAAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS CAA 72 bp | CCACATCATCATCAATTACATTCAATTTGTCCACCGTaGCTGTCTCAACCTCTGTGCTTAAGTCAGTCGTTA | + |
|
Preference number: 6 (lower is better) Translates to: PHHHQLHSICPP*LSQPLCLSQSL Trigger: TAACGACTGACTTAAGCACAGAGGTTGAGACAGCAACGGTGGACAAATTGAATGTAATTGATGATGATGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS GCA 72 bp | TCCAGCACCTTTACGTTCAACTCAGACAGTTCTGAATaGTTCCTATCAATCTCTTCAAGTTTTTCATCTATC | + |
|
Preference number: 6 (lower is better) Translates to: SSTFTFNSDSSE*FLSISSSFSSI Trigger: GATAGATGAAAAACTTGAAGAGATTGATAGGAAGCATTCAGAACTGTCTGAGTTGAACGTAAAGGTGCTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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| CDS CAA 72 bp | TTAATTTCCTCCACATCATCATCAATTACATTCAATTaGTCCACCGTTGCTGTCTCAACCTCTGTGCTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LISSTSSSITFN*STVAVSTSVLK Trigger: CTTAAGCACAGAGGTTGAGACAGCAACGGTGGACAAATTGAATGTAATTGATGATGATGTGGAGGAAATTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102759.8 ENSMUST00000127316.8 |
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