Pregenerated sensors for STAG3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036928Ensembl transcript IDs: ENSMUST00000048028.15, ENSMUST00000159189.2, ENSMUST00000160729.8, ENSMUST00000160849.2, ENSMUST00000161691.2, ENSMUST00000162245.8
Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATGCTCACTCAAGGACTTaGAGTGGTAAGTGGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PYPTPITANRQKHKAMAHAHSRT*SGKWRR Trigger: CCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGC...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048028.15 ENSMUST00000159189.2 ENSMUST00000162245.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTTTACTCCTTCCTTCTaGTCACTCAAGGACTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: PYPTPITANRQKHKAMAHFTPSF*SLKDLQ Trigger: CTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAGTAAA...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048028.15 ENSMUST00000159189.2 ENSMUST00000162245.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATCTAGGACCCAAAGAATaGTTCATTTTACTCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PYPTPITANRQKHKAMAHLGPKE*FILLLP Trigger: AGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAG...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048028.15 ENSMUST00000159189.2 ENSMUST00000162245.8 |
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| 3UTR-3UTR GCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATTTTACTCCTTCCTTCTaGTCACTCAAGGACTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDFTPSF*SLKDLQ Trigger: CTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAGTAAA...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048028.15 ENSMUST00000159189.2 ENSMUST00000162245.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTTTTCCTTTAAAGTACTaGGCTAGGACCCAAAGAATG | + |
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Preference number: 3 (lower is better) Translates to: FLLLTQGLAVVSGEGERPFPLKY*ARTQRM Trigger: CATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAA...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048028.15 ENSMUST00000159189.2 ENSMUST00000162245.8 |
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| 3UTR-3UTR CAA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGTTTCCTTTAAAGTACTaGGCTAGGACCCAAAGAATG | + |
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Preference number: 3 (lower is better) Translates to: RKALPTQLLSLQTGKSIKFPLKY*ARTQRM Trigger: CATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAA...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048028.15 ENSMUST00000159189.2 ENSMUST00000162245.8 |
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| 3UTR CCA 72 bp | CTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATaGCGCATTAAGGATGACAAGGCTCATAGCATCTAT | + |
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Preference number: 3 (lower is better) Translates to: LLSLQTGKSIKR*RIKDDKAHSIY Trigger: ATAGATGCTATGAGCCTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048028.15 ENSMUST00000159189.2 ENSMUST00000162245.8 |
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| CDS-3UTR TCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATCGCCCCACTGGAGGGTaGCCCTCTGCAGCTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHRPTGG*PSAACR Trigger: CCGGCAAGCTGCAGAGGGTCACCCTCCAGTGGGGCG...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGAGGGCATGGGCTGCTaGCTCAAGCACCTCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGEEGMGC*LKHLRL Trigger: GAGCCTGAGGTGCTTGAGGCAGCAGCCCATGCCCTC...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTGAGGGCATGGGCTGCTaGCTCAAGCACCTCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPEGMGC*LKHLRL Trigger: GAGCCTGAGGTGCTTGAGGCAGCAGCCCATGCCCTC...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR TCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGAGTAGCCGCTTGTCCTaGTGGAAGAGGCGAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGESSRLS*WKRRGE Trigger: CTCCCCTCGCCTCTTCCATCAGGACAAGCGGCTACT...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR TCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTGGCTGGCCTCTGCTGTaGTCTCTAGAGGGTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPGWPLL*SLEGEG Trigger: CCCTTCACCCTCTAGAGATCACAGCAGAGGCCAGCC...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR TCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGGCTGGCCTCTGCTGTaGTCTCTAGAGGGTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGEGWPLL*SLEGEG Trigger: CCCTTCACCCTCTAGAGATCACAGCAGAGGCCAGCC...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTAGTTCTGTCAGGCCCTaGGGGCCCTGCTCCTGTATC | + |
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Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPSSVRP*GPCSCI Trigger: GATACAGGAGCAGGGCCCCCAGGGCCTGACAGAACT...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTCTCTGGTCCTGGTCCTaGTCCTGGTCCTGGTCTACC | + |
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Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPLWSWS*SWSWST Trigger: GGTAGACCAGGACCAGGACCAGGACCAGGACCAGAG...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTAGCTCAGCTCCTGGTTaGTGTACAGCCCTGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPSSAPG*CTALPE Trigger: CTCTGGCAGGGCTGTACAGCAACCAGGAGCTGAGCT...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGCTTCCAGGAGGGACCTaGAGCTGTCAGGGGATAGTC | + |
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Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGELPGGT*SCQGIV Trigger: GACTATCCCCTGACAGCTCCAGGTCCCTCCTGGAAG...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTCTTCCAGGAGGGACCTaGAGCTGTCAGGGGATAGTC | + |
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Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPLPGGT*SCQGIV Trigger: GACTATCCCCTGACAGCTCCAGGTCCCTCCTGGAAG...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR TCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATGAGGACTCTTCTTCCTaGGGCCTGCAGGGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHEDSSS*GLQGPS Trigger: TGAAGGCCCCTGCAGGCCTCAGGAAGAAGAGTCCTC...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTGAGGAAGAGCCATGGTaGTGGGTAGAAGGTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPEEEPW*WVEGDH Trigger: GTGGTCACCTTCTACCCAGCACCATGGCTCTTCCTC...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTACCTCAGGCTCTACATaGTTCACCACCACCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPTSGST*FTTTSW Trigger: CCAGGAGGTGGTGGTGAAGCATGTAGAGCCTGAGGT...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATGTCGGGTCAGCTGCTTaGCCAAGCCAGAGCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHVGSAA*PSQSLK Trigger: CTTCAGGCTCTGGCTTGGGCAAGCAGCTGACCCGAC...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATAGTTCTGTCAGGCCCTaGGGGCCCTGCTCCTGTATC | + |
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Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHSSVRP*GPCSCI Trigger: GATACAGGAGCAGGGCCCCCAGGGCCTGACAGAACT...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR TCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTCGGACCTGGGAATCTaGGAGGCCAATGAGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHSDLGI*EANEQG Trigger: TCCCTGCTCATTGGCCTCTCAGATTCCCAGGTCCGA...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR TCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTGAAAGACATGGTCCATaGGGAAGCTGGCTAGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPERHGP*GSWLVP Trigger: CGGAACTAGCCAGCTTCCTCATGGACCATGTCTTTC...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR TCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGAGTGGCAGTAGGTGGTaGCTGGACCCCAGGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKSGSRW*LDPRDG Trigger: ACCATCCCTGGGGTCCAGTCACCACCTACTGCCACT...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTACCTCCTGGAGTTGTTaGAGAAGCAGCTCCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPTSWSC*RSSSKC Trigger: GCACTTGGAGCTGCTTCTGCAACAACTCCAGGAGGT...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATCTTCTTCCTGAGGCCTaGAGGGGCCTTCAACACACC | + |
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Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHLLPEA*RGLQHT Trigger: GGTGTGTTGAAGGCCCCTGCAGGCCTCAGGAAGAAG...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATCTGCTTCCTCTTCACTaGGGTGGAGGTGAGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHLLPLH*GGGEGR Trigger: CCTACCCTCACCTCCACCGCAGTGAAGAGGAAGCAG...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGGTCGGGTCAGCTGCTTaGCCAAGCCAGAGCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKVGSAA*PSQSLK Trigger: CTTCAGGCTCTGGCTTGGGCAAGCAGCTGACCCGAC...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGAAGAGCCATGGTGCTaGGTAGAAGGTGACCACAGA | + |
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Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGEEEPWC*VEGDHR Trigger: TCTGTGGTCACCTTCTACCCAGCACCATGGCTCTTC...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGCTGCTGGAACAGCTTTaGGTGGTTGCTTTGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGELLEQL*VVALLL Trigger: GAGCAGCAAAGCAACCACCCAAAGCTGTTCCAGCAG...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTACAAAAGCCTGCTCCTaGATCTCTGGGTCCACGTCT | + |
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Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPTKACS*ISGSTS Trigger: AGACGTGGACCCAGAGATCCAGGAGCAGGCTTTTGT...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGTCCTGGTCCTGGTCCTaGTCCTGGTCTACCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGESWSWS*SWSTFL Trigger: CAAAAAGGTAGACCAGGACCAGGACCAGGACCAGGA...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCTCTGGTCCTGGTCCTaGTCCTGGTCCTGGTCTACC | + |
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Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKLWSWS*SWSWST Trigger: GGTAGACCAGGACCAGGACCAGGACCAGGACCAGAG...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR TCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTCGTCTCACAGACTTTTaGAGTGGGGAAGACTCACTG | + |
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Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPRLTDF*SGEDSL Trigger: CAGTGAGTCTTCCCCACTTCAAAAGTCTGTGAGACG...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR TCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGTCGGACCTGGGAATCTaGGAGGCCAATGAGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKSDLGI*EANEQG Trigger: TCCCTGCTCATTGGCCTCTCAGATTCCCAGGTCCGA...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR TCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGGACGTGATCCTCCTGTaGCTGACCGTTGCCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKDVILL*LTVAQF Trigger: GAACTGGGCAACGGTCAGTCACAGGAGGATCACGTC...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGCTTCCGATGTTTTGCTaGTGGAACAGCTTTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGELPMFC*WNSFGW Trigger: CCACCCAAAGCTGTTCCAGCAGCAAAACATCGGAAG...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGAGGCGAACTTCCTTGTaGTTATCATGCAGGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGERRTSL*LSCRVQ Trigger: CTGGACCCTGCATGATAAGCACAAGGAAGTTCGCCT...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTAAGAGGGGGATGAGGTaGTCAGCCAGCTTCATCTTA | + |
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Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPKRGMR*SASFIL Trigger: TAAGATGAAGCTGGCTGAGCACCTCATCCCCCTCTT...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATCAGCTTACAAAATCCTaGAAGCAGGCGGCGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHQLTKS*KQAAPL Trigger: CAGAGGCGCCGCCTGCTTGCAGGATTTTGTAAGCTG...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR GCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGAATAGGTCCAACCCATaGTCACTGGGAGAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGENRSNP*SLGEEG Trigger: CCCTTCTTCTCCCAGTGAGCATGGGTTGGACCTATT...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGTCTGAGAGGCAGCTTTaGCAAAGCTCACAGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGESERQL*QSSQKA Trigger: AGCCTTCTGTGAGCTTTGCCAAAGCTGCCTCTCAGA...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGCTGGCTAGTTCCGACTaGAGAGTAGCTTCCGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGELASSD*RVASGK Trigger: TTTTCCGGAAGCTACTCTCCAGTCGGAACTAGCCAG...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATCCCCCTACAATCATCTaGGGGCTGAAGATGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHPPTII*GLKMRS Trigger: GCTTCTCATCTTCAGCCCTCAGATGATTGTAGGGGG...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATAGTAGCCGCTTGTCCTaGTGGAAGAGGCGAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDSSRLS*WKRRGE Trigger: CTCCCCTCGCCTCTTCCATCAGGACAAGCGGCTACT...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGGAGGACTCTTCTTCCTaGGGCCTGCAGGGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKEDSSS*GLQGPS Trigger: TGAAGGCCCCTGCAGGCCTCAGGAAGAAGAGTCCTC...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATGCTTTCTTCCTGGGATaGGGACTCTTCTTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHAFFLG*GLFFLR Trigger: CCTCAGGAAGAAGAGTCCTCATCCCAGGAAGAAAGC...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTCTCTCTATCACTCACTaGTTTTGCCCCACATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPLSITH*FCPTFR Trigger: CCTGAATGTGGGGCAAAAGCAGTGAGTGATAGAGAG...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGTGGAGGGTGACCCTCTaGAGCTTGCCGGGCACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKWRVTL*SLPGTR Trigger: TCTAGTGCCCGGCAAGCTGCAGAGGGTCACCCTCCA...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATAGGCCCTGGGGGCCCTaGTCCTGTATCAGTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDRPWGP*SCISSV Trigger: CACAGAACTGATACAGGAGCAGGGCCCCCAGGGCCT...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATCTGAGTCGGGTCAGCTaGTTGCCCAAGCCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDLSRVS*LPKPEP Trigger: AGGCTCTGGCTTGGGCAAGCAGCTGACCCGACTCAG...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTATGTCCCTGTACCGATaGACAAAGACACCTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPMSLYR*TKTPLK Trigger: CTTCAGAGGTGTCTTTGTCCATCGGTACAGGGACAT...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGAGGAGAAGGGACTGCTaGGTCCAGACCTTGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKRRRDC*VQTLSP Trigger: TGGAGACAAGGTCTGGACCCAGCAGTCCCTTCTCCT...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159189.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGCCGTTAGGTGTTGGATaGTCTCTGAATTGGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGEPLGVG*SLNWTL Trigger: CAATGTCCAATTCAGAGATCATCCAACACCTAACGG...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGCCAGGGTACTAGTATaGCGAAAGGCTCGGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDARVLV*RKARTW Trigger: CCAGGTCCGAGCCTTTCGTCATACTAGTACCCTGGC...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATGTGTTTGAAAACGTCTaGGGCTGCATCCAGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHVFENV*GCIQLQ Trigger: TTGGAGCTGGATGCAGCCTCAGACGTTTTCAAACAC...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATCTTCCGATGTTTTGCTaGTGGAACAGCTTTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHLPMFC*WNSFGW Trigger: CCACCCAAAGCTGTTCCAGCAGCAAAACATCGGAAG...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGAGGCGGCGCCTCTGGTaGAGAAGTTCTATCTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKRRRLW*RSSIWT Trigger: CGTCCAGATAGAACTTCTGCACCAGAGGCGCCGCCT...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATCTAAGAGTTGCTGACTaGAGATCAGCTCTGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHLRVAD*RSALVL Trigger: CAGGACCAGAGCTGATCTGCAGTCAGCAACTCTTAG...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGACCTTGTCTCCACGTTaGCATTCTTCATCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGETLSPR*HSSSRS Trigger: ACTTCTGGATGAAGAATGGCAACGTGGAGACAAGGT...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159189.2 |
||
| CDS-3UTR CCA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGAACTTGGCAAGGAGCTaGGGCAAGAGGGGGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKNLARS*GKRGMR Trigger: CCTCATCCCCCTCTTGCCCCAGCTCCTTGCCAAGTT...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTACCAGAGTCAAGGCTaGCAAAATCACCTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHYQSQG*QNHLVR Trigger: CCTCACCAGGTGATTTTGCCAGCCTTGACTCTGGTA...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCCCAGTTCTCCAGGCTaGAGAAAGACATGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKPSSPG*RKTWSM Trigger: CATGGACCATGTCTTTCTCCAGCCTGGAGAACTGGG...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATACAAGATCTCGGTTATaGAGCTGCTGGGGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHTRSRL*SCWGPK Trigger: CTTTGGACCCCAGCAGCTCCATAACCGAGATCTTGT...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATACTGCAGATCAGCTCTaGTCCTGGTCCTGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDTADQL*SWSWSW Trigger: CCAGGACCAGGACCAGGACCAGAGCTGATCTGCAGT...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATCCAACCCATGCTCACTaGGAGAAGAAGGGCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHPTHAH*EKKGYE Trigger: TTCATAGCCCTTCTTCTCCCAGTGAGCATGGGTTGG...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGCTCATCAGCTGCTTATaGGAAGTAGACTCTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGELISCL*EVDSEM Trigger: CATTTCAGAGTCTACTTCTCATAAGCAGCTGATGAG...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCAGTGGCAGTAGGTGGTaGCTGGACCCCAGGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCSGSRW*LDPRDG Trigger: ACCATCCCTGGGGTCCAGTCACCACCTACTGCCACT...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGGGCCACTGTTCAGCTaGAGGCTTTCTTCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDGPLFS*RLSSWD Trigger: ATCCCAGGAAGAAAGCCTTCAGCTGAACAGTGGCCC...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCTGGAGGGTGACCCTCTaGAGCTTGCCGGGCACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCWRVTL*SLPGTR Trigger: TCTAGTGCCCGGCAAGCTGCAGAGGGTCACCCTCCA...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATAGGCCCTGGGGGCCCTaGTCCTGTATCAGTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHRPWGP*SCISSV Trigger: CACAGAACTGATACAGGAGCAGGGCCCCCAGGGCCT...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGTCTTCAACCTCTGGGTaGCTAAGAGTTGCTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKSSTSG*LRVADC Trigger: GCAGTCAGCAACTCTTAGGCACCCAGAGGTTGAAGA...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATGAAGCTTGCGTTCTTTaGCCGTCAGACTCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHEACVL*PSDSSF Trigger: GAAAGAAGAGTCTGACGGCCAAAGAACGCAAGCTTC...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTGTAGACTCTGAAATGTaGGTTACTGTCCAGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPVDSEM*VTVQRM Trigger: CATTCTCTGGACAGTAACCCACATTTCAGAGTCTAC...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGTCTGAGAGGCAGCTTTaGCAAAGCTCACAGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKSERQL*QSSQKA Trigger: AGCCTTCTGTGAGCTTTGCCAAAGCTGCCTCTCAGA...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCTGGCTAGTTCCGACTaGAGAGTAGCTTCCGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKLASSD*RVASGK Trigger: TTTTCCGGAAGCTACTCTCCAGTCGGAACTAGCCAG...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATACTGGACCCCAGGGATaGTTAGGTGCCTTGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDTGPQG*LGALET Trigger: TGTCTCCAAGGCACCTAACCATCCCTGGGGTCCAGT...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCGGAAGACTCACTGCCTaGGGAAGAGCCATGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCGRLTA*GRAMVL Trigger: CAGCACCATGGCTCTTCCTCAGGCAGTGAGTCTTCC...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGCCCCCTACAATCATCTaGGGGCTGAAGATGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKPPTII*GLKMRS Trigger: GCTTCTCATCTTCAGCCCTCAGATGATTGTAGGGGG...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGAAAGACATGGTCCATaGGGAAGCTGGCTAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDERHGP*GSWLVP Trigger: CGGAACTAGCCAGCTTCCTCATGGACCATGTCTTTC...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCGACGTGATCCTCCTGTaGCTGACCGTTGCCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCDVILL*LTVAQF Trigger: GAACTGGGCAACGGTCAGTCACAGGAGGATCACGTC...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATAGGAAGCTCAGACAATaGGAACTTGATGCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHRKLRQ*ELDAFL Trigger: AAGGAAGGCATCAAGTTCTCATTGTCTGAGCTTCCT...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATAGATTTGGGGGCTCATaGGAAGAACCAGCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDRFGGS*EEPAGG Trigger: TCCTCCTGCTGGTTCTTCTCATGAGCCCCCAAATCT...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTGAGCTCCAAGAATCCTaGATTTTCATCTTGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLLLTQGLAVVSGEGERPELQES*IFILLV Trigger: TACAAGCAAGATGAAAATGCAGGATTCTTGGAGCTC...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGAGCTCCAAGAATCCTaGATTTTCATCTTGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLPSAHSRTCSGKWRRGEELQES*IFILLV Trigger: TACAAGCAAGATGAAAATGCAGGATTCTTGGAGCTC...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATAATTTTCTCACAGTCTaGACTAGTCAGCACTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PYPTPITANRQKHKAMAHNFLTV*TSQHSL Trigger: GAGGGAGTGCTGACTAGTGCAGACTGTGAGAAAATT...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGAAGAAGCTCCAGGAATaGAAGATTTGGGGGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKKKLQE*KIWGLM Trigger: CATGAGCCCCCAAATCTTGCATTCCTGGAGCTTCTT...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCCTTCTTCCTGAGGCCTaGAGGGGCCTTCAACACACC | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCLLPEA*RGLQHT Trigger: GGTGTGTTGAAGGCCCCTGCAGGCCTCAGGAAGAAG...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCAGGAATGCAAGATTTaGGGGCTCATGAGAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKQECKI*GLMRRT Trigger: GGTTCTTCTCATGAGCCCCCAAATCTTGCATTCCTG...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCACTGCAGATCAGCTCTaGTCCTGGTCCTGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCTADQL*SWSWSW Trigger: CCAGGACCAGGACCAGGACCAGAGCTGATCTGCAGT...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATCGTCTCACAGACTTTTaGAGTGGGGAAGACTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDRLTDF*SGEDSL Trigger: CAGTGAGTCTTCCCCACTTCAAAAGTCTGTGAGACG...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCCTCTGCAGTTCCCTGTaGGTCTCTGTCATCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCLCSSL*VSVITG Trigger: CCCTGTGATGACAGAGACTCACAGGGAACTGCAGAG...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGAGGAAGCTCAGACAATaGGAACTTGATGCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKRKLRQ*ELDAFL Trigger: AAGGAAGGCATCAAGTTCTCATTGTCTGAGCTTCCT...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCGCGAGGGGAGAACTCTaGAAGAAGCTCCAGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCARGEL*KKLQEC Trigger: GCATTCCTGGAGCTTCTTTCAGAGTTCTCCCCTCGC...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATGGGCCACTGTTCAGCTaGAGGCTTTCTTCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHGPLFS*RLSSWD Trigger: ATCCCAGGAAGAAAGCCTTCAGCTGAACAGTGGCCC...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCGAGGAAGAGCCATGGTaGTGGGTAGAAGGTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCEEEPW*WVEGDH Trigger: GTGGTCACCTTCTACCCAGCACCATGGCTCTTCCTC...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATGTGGGGAAGACTCACTaGCTGAGGAAGAGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHVGKTH*LRKSHG Trigger: ACCATGGCTCTTCCTCAGGCAGTGAGTCTTCCCCAC...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCGTGGGGAAGACTCACTaGCTGAGGAAGAGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCVGKTH*LRKSHG Trigger: ACCATGGCTCTTCCTCAGGCAGTGAGTCTTCCCCAC...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATAGGCGAACTTCCTTGTaGTTATCATGCAGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDRRTSL*LSCRVQ Trigger: CTGGACCCTGCATGATAAGCACAAGGAAGTTCGCCT...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCCAGCTTACAAAATCCTaGAAGCAGGCGGCGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCQLTKS*KQAAPL Trigger: CAGAGGCGCCGCCTGCTTGCAGGATTTTGTAAGCTG...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGTACCTTTTTGCTTCTTaGCCACTGTCCTCAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKYLFAS*PLSSET Trigger: AGTCTCTGAGGACAGTGGGCAAGAAGCAAAAAGGTA...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATCTAAGAGTTGCTGACTaGAGATCAGCTCTGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDLRVAD*RSALVL Trigger: CAGGACCAGAGCTGATCTGCAGTCAGCAACTCTTAG...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTCTGAGTCGGGTCAGCTaGTTGCCCAAGCCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPLSRVS*LPKPEP Trigger: AGGCTCTGGCTTGGGCAAGCAGCTGACCCGACTCAG...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATAATAGGTCCAACCCATaGTCACTGGGAGAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDNRSNP*SLGEEG Trigger: CCCTTCTTCTCCCAGTGAGCATGGGTTGGACCTATT...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATCCGATGTTTTGCTGCTaGAACAGCTTTGGGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDPMFCC*NSFGWL Trigger: CAACCACCCAAAGCTGTTCCAGCAGCAAAACATCGG...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATTACCAGAGTCAAGGCTaGCAAAATCACCTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDYQSQG*QNHLVR Trigger: CCTCACCAGGTGATTTTGCCAGCCTTGACTCTGGTA...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATACTGGACCCCAGGGATaGTTAGGTGCCTTGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHTGPQG*LGALET Trigger: TGTCTCCAAGGCACCTAACCATCCCTGGGGTCCAGT...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTGGAAGACTCACTGCCTaGGGAAGAGCCATGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPGRLTA*GRAMVL Trigger: CAGCACCATGGCTCTTCCTCAGGCAGTGAGTCTTCC...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTGCCAGGGTACTAGTATaGCGAAAGGCTCGGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPARVLV*RKARTW Trigger: CCAGGTCCGAGCCTTTCGTCATACTAGTACCCTGGC...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGACTTGTTGTAGTGTTTaGAAACGTCTGAGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKTCCSV*KRLRLH Trigger: ATGCAGCCTCAGACGTTTTCAAACACTACAACAAGT...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGAGTCTCTCATCTCAATaGAGGCTGGCAGTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKSLSSQ*RLAVLS Trigger: TGACAGAACTGCCAGCCTTCATTGAGATGAGAGACT...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCAGATTTGGGGGCTCATaGGAAGAACCAGCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCRFGGS*EEPAGG Trigger: TCCTCCTGCTGGTTCTTCTCATGAGCCCCCAAATCT...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCGCTTTCTTCCTGGGATaGGGACTCTTCTTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCAFFLG*GLFFLR Trigger: CCTCAGGAAGAAGAGTCCTCATCCCAGGAAGAAAGC...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATACAGCTTTGGGTGGTTaGTTTGCTGCTCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDTALGG*FAALFF Trigger: GAAGAAGAGAGCAGCAAAGCAACCACCCAAAGCTGT...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCAGACTCAACTGGAGTaGAACTTTTACCAGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKQTQLE*NFYQRS Trigger: ACTTCTCTGGTAAAAGTTGCACTCCAGTTGAGTCTG...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGATCAGCATTCTCTCTTaGATATCACCCAGATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKALPTQLLSLQTGKSIKISILS*ISPRFW Trigger: CCAGAATCTGGGTGATATGCAAGAGAGAATGCTGAT...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCTCTCGGTTATGGAGCTaGTGGGGTCCAAAGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCSRLWS*WGPKLK Trigger: CTTGAGCTTTGGACCCCAGCAGCTCCATAACCGAGA...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCGAAGAGCCATGGTGCTaGGTAGAAGGTGACCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCEEPWC*VEGDHR Trigger: TCTGTGGTCACCTTCTACCCAGCACCATGGCTCTTC...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGATGTCCCTGTACCGATaGACAAAGACACCTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKMSLYR*TKTPLK Trigger: CTTCAGAGGTGTCTTTGTCCATCGGTACAGGGACAT...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTAACTTGGCAAGGAGCTaGGGCAAGAGGGGGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPNLARS*GKRGMR Trigger: CCTCATCCCCCTCTTGCCCCAGCTCCTTGCCAAGTT...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCCCCAGTTCTCCAGGCTaGAGAAAGACATGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCPSSPG*RKTWSM Trigger: CATGGACCATGTCTTTCTCCAGCCTGGAGAACTGGG...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATCAGGAATGCAAGATTTaGGGGCTCATGAGAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDQECKI*GLMRRT Trigger: GGTTCTTCTCATGAGCCCCCAAATCTTGCATTCCTG...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGTCCTGGTCCTGGTCCTaGTCTACCTTTTTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKSWSWS*STFLLL Trigger: AAGAAGCAAAAAGGTAGACCAGGACCAGGACCAGGA...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTCCTGGTCCTGGTCCTaGTCCTGGTCTACCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHSWSWS*SWSTFL Trigger: CAAAAAGGTAGACCAGGACCAGGACCAGGACCAGGA...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTGCGAGGGGAGAACTCTaGAAGAAGCTCCAGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPARGEL*KKLQEC Trigger: GCATTCCTGGAGCTTCTTTCAGAGTTCTCCCCTCGC...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATTCATCCACCAAAGACTaGATGCAACTTCTAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDSSTKD*MQLLAA Trigger: AGCTGCTAGAAGTTGCATGCAGTCTTTGGTGGATGA...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATAATTTTCTCACAGTCTaGACTAGTCAGCACTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDNFLTV*TSQHSL Trigger: GAGGGAGTGCTGACTAGTGCAGACTGTGAGAAAATT...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCAAGAGGGGGATGAGGTaGTCAGCCAGCTTCATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCKRGMR*SASFIL Trigger: TAAGATGAAGCTGGCTGAGCACCTCATCCCCCTCTT...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGTCTAGGAAGGATGACTaGATTAGGTCATCAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKSRKDD*IRSSSS Trigger: GGAGCTTGATGACCTAATGCAGTCATCCTTCCTAGA...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGTTGATGCCTTCCTTGTaGAGCATGACCACAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKLMPSL*SMTTRS Trigger: AGATCTTGTGGTCATGCTGCACAAGGAAGGCATCAA...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTCTTCAACCTCTGGGTaGCTAAGAGTTGCTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHSSTSG*LRVADC Trigger: GCAGTCAGCAACTCTTAGGCACCCAGAGGTTGAAGA...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATCCGATGTTTTGCTGCTaGAACAGCTTTGGGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHPMFCC*NSFGWL Trigger: CAACCACCCAAAGCTGTTCCAGCAGCAAAACATCGG...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATATATCACCCAGATTCTaGTCTTTCTGCAGCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDISPRF*SFCSNR Trigger: CCTGTTGCTGCAGAAAGACCAGAATCTGGGTGATAT...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATACAAGATCTCGGTTATaGAGCTGCTGGGGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHTRSRL*SCWGPK Trigger: CTTTGGACCCCAGCAGCTCCATAACCGAGATCTTGT...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGAATTGGACATTGTCTTaGACATCTCAGGAGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKNWTLS*TSQESQ Trigger: CTGTGACTCCTGAGATGTTCAAGACAATGTCCAATT...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCGGACAAAGACACCTCTaGAGATGGCATTCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCGQRHL*RWHSSS Trigger: GGATGATGAATGCCATCTTCAGAGGTGTCTTTGTCC...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATGGACAAAGACACCTCTaGAGATGGCATTCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHGQRHL*RWHSSS Trigger: GGATGATGAATGCCATCTTCAGAGGTGTCTTTGTCC...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATCTCATCAGCTGCTTATaGGAAGTAGACTCTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDLISCL*EVDSEM Trigger: CATTTCAGAGTCTACTTCTCATAAGCAGCTGATGAG...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGACTTGTTGTAGTGTTTaGAAACGTCTGAGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKTCCSV*KRLRLH Trigger: ATGCAGCCTCAGACGTTTTCAAACACTACAACAAGT...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCAGTCTCTCATCTCAATaGAGGCTGGCAGTTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCSLSSQ*RLAVLS Trigger: TGACAGAACTGCCAGCCTTCATTGAGATGAGAGACT...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATCTCTCTATCACTCACTaGTTTTGCCCCACATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHLSITH*FCPTFR Trigger: CCTGAATGTGGGGCAAAAGCAGTGAGTGATAGAGAG...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCTCGGTTATGGAGCTaGTGGGGTCCAAAGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPSRLWS*WGPKLK Trigger: CTTGAGCTTTGGACCCCAGCAGCTCCATAACCGAGA...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCTGGAACAGCTTTGGGTaGTTGCTTTGCTGCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCWNSFG*LLCCSL Trigger: AAGAGAGCAGCAAAGCAACCACCCAAAGCTGTTCCA...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTGGAACAGCTTTGGGTaGTTGCTTTGCTGCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHWNSFG*LLCCSL Trigger: AAGAGAGCAGCAAAGCAACCACCCAAAGCTGTTCCA...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCGAAGCTTGCGTTCTTTaGCCGTCAGACTCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCEACVL*PSDSSF Trigger: GAAAGAAGAGTCTGACGGCCAAAGAACGCAAGCTTC...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTCATCTGCTGAGAACTTaGCAAGGAGCTGGGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPHLLRT*QGAGAR Trigger: TCTTGCCCCAGCTCCTTGCCAAGTTCTCAGCAGATG...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTTCACCACCACCTCCTaGAGTTGTTGCAGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPFTTTS*SCCRSS Trigger: GCTGCTTCTGCAACAACTCCAGGAGGTGGTGGTGAA...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGTAGACTCTGAAATGTaGGTTACTGTCCAGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDVDSEM*VTVQRM Trigger: CATTCTCTGGACAGTAACCCACATTTCAGAGTCTAC...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTCCTGGTCCTGGTCCTaGTCTACCTTTTTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHSWSWS*STFLLL Trigger: AAGAAGCAAAAAGGTAGACCAGGACCAGGACCAGGA...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTGTGTTTGAAAACGTCTaGGGCTGCATCCAGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPVFENV*GCIQLQ Trigger: TTGGAGCTGGATGCAGCCTCAGACGTTTTCAAACAC...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTCTAGGAAGGATGACTaGATTAGGTCATCAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHSRKDD*IRSSSS Trigger: GGAGCTTGATGACCTAATGCAGTCATCCTTCCTAGA...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCTACCTTTTTGCTTCTTaGCCACTGTCCTCAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCYLFAS*PLSSET Trigger: AGTCTCTGAGGACAGTGGGCAAGAAGCAAAAAGGTA...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATATATCACCCAGATTCTaGTCTTTCTGCAGCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHISPRF*SFCSNR Trigger: CCTGTTGCTGCAGAAAGACCAGAATCTGGGTGATAT...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATGAAGAAGGTGAACTCTaGTTTGCAGAGCAGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHEEGEL*FAEQIE Trigger: CTCTATCTGCTCTGCAAACCAGAGTTCACCTTCTTC...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTCCAACCCATGCTCACTaGGAGAAGAAGGGCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPPTHAH*EKKGYE Trigger: TTCATAGCCCTTCTTCTCCCAGTGAGCATGGGTTGG...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATAATTGGACATTGTCTTaGACATCTCAGGAGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHNWTLS*TSQESQ Trigger: CTGTGACTCCTGAGATGTTCAAGACAATGTCCAATT...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCCCCTCTATGTCCTCTTaGTTCTCTTGGAACTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKYLARTQRMLHFTPSFCPSMSS*FSWNSF Trigger: AAAAGAGTTCCAAGAGAATCAAGAGGACATAGAGGG...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATAGATTCTGGTCTTTCTaGAGCAACAGGTTTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHRFWSF*SNRFVR Trigger: TCTGACAAACCTGTTGCTGCAGAAAGACCAGAATCT...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATATCAGCATTCTCTCTTaGATATCACCCAGATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GHFSFPLKYLARTQRMLHISILS*ISPRFW Trigger: CCAGAATCTGGGTGATATGCAAGAGAGAATGCTGAT...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTAATAAGACAAAAGCCTaGTCCTGGATCTCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPNKTKA*SWISGS Trigger: GGACCCAGAGATCCAGGAGCAGGCTTTTGTCTTATT...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTAAGAAGCTCCAGGAATaGAAGATTTGGGGGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPKKLQE*KIWGLM Trigger: CATGAGCCCCCAAATCTTGCATTCCTGGAGCTTCTT...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATAGAAAATCTACTAATTaGCTTCTGGCAAAGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDRKSTN*LLAKST Trigger: AGTGGACTTTGCCAGAAGCCAATTAGTAGATTTTCT...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGAGAAAATCTACTAATTaGCTTCTGGCAAAGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKRKSTN*LLAKST Trigger: AGTGGACTTTGCCAGAAGCCAATTAGTAGATTTTCT...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTCCGTTAGGTGTTGGATaGTCTCTGAATTGGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPPLGVG*SLNWTL Trigger: CAATGTCCAATTCAGAGATCATCCAACACCTAACGG...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTTGATGCCTTCCTTGTaGAGCATGACCACAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPLMPSL*SMTTRS Trigger: AGATCTTGTGGTCATGCTGCACAAGGAAGGCATCAA...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTGAAGAAGGTGAACTCTaGTTTGCAGAGCAGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPEEGEL*FAEQIE Trigger: CTCTATCTGCTCTGCAAACCAGAGTTCACCTTCTTC...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTCCCTCTATGTCCTCTTaGTTCTCTTGGAACTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFPLKYLARTQRMLHFTPPSMSS*FSWNSF Trigger: AAAAGAGTTCCAAGAGAATCAAGAGGACATAGAGGG...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS TCA 90 bp | AGGCTTGAAGCTTGCGTTCTTTGGCCGTCAGACTCTTCTTTCCAGTaGTGCGCCCCACTGGAGGGTGACCCTCTGCAGCTTGCCGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RLEACVLWPSDSSFQ*CAPLEGDPLQLAGH Trigger: GTGCCCGGCAAGCTGCAGAGGGTCACCCTCCAGTGGGGCGCATCACTGGAAAGAAGAGTCTGACGGCCAAAGAACGCAAGCTTCAAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS CCA 90 bp | GCGTTCTTTGGCCGTCAGACTCTTCTTTCCAGTGATGCGCCCCACTaGAGGGTGACCCTCTGCAGCTTGCCGGGCACTAGACACAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AFFGRQTLLSSDAPH*RVTLCSLPGTRHKD Trigger: ATCCTTGTGTCTAGTGCCCGGCAAGCTGCAGAGGGTCACCCTCCAGTGGGGCGCATCACTGGAAAGAAGAGTCTGACGGCCAAAGAACGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS TCA 90 bp | GCGGCGCCTCTGGTGCAGAAGTTCTATCTGGACGTGATCCTCCTGTaGCTGACCGTTGCCCAGTTCTCCAGGCTGGAGAAAGACATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AAPLVQKFYLDVILL*LTVAQFSRLEKDMV Trigger: GACCATGTCTTTCTCCAGCCTGGAGAACTGGGCAACGGTCAGTCACAGGAGGATCACGTCCAGATAGAACTTCTGCACCAGAGGCGCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS GCA 90 bp | CTGGTCCTGGTCCTGGTCCTGGTCCTGGTCTACCTTTTTGCTTCTTaGCCACTGTCCTCAGAGACTGCTTCCTCTTCACTGCGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVLVLVLVLVYLFAS*PLSSETASSSLRWR Trigger: CCTCCACCGCAGTGAAGAGGAAGCAGTCTCTGAGGACAGTGGGCAAGAAGCAAAAAGGTAGACCAGGACCAGGACCAGGACCAGGACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048028.15 ENSMUST00000160849.2 ENSMUST00000162245.8 |
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| CDS GCA 90 bp | GAAGGTGAACTCTGGTTTGCAGAGCAGATAGAGGGCATGGGCTGCTaGCTCAAGCACCTCAGGCTCTACATGCTTCACCACCACCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGELWFAEQIEGMGC*LKHLRLYMLHHHLL Trigger: CAGGAGGTGGTGGTGAAGCATGTAGAGCCTGAGGTGCTTGAGGCAGCAGCCCATGCCCTCTATCTGCTCTGCAAACCAGAGTTCACCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS GCA 90 bp | GAAGAAGGTGAACTCTGGTTTGCAGAGCAGATAGAGGGCATGGGCTaGTGCCTCAAGCACCTCAGGCTCTACATGCTTCACCACCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: EEGELWFAEQIEGMG*CLKHLRLYMLHHHL Trigger: GAGGTGGTGGTGAAGCATGTAGAGCCTGAGGTGCTTGAGGCAGCAGCCCATGCCCTCTATCTGCTCTGCAAACCAGAGTTCACCTTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CCA 90 bp | CCCACTCTGCAGTTCCCTGTGAGTCTCTGTCATCACAGGGTAGGATaGAGGAGGAACAAGGAGACAAGGCCATCTGTGCACGTCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PTLQFPVSLCHHRVG*RRNKETRPSVHVSQ Trigger: CTGTGAGACGTGCACAGATGGCCTTGTCTCCTTGTTCCTCCTCCATCCTACCCTGTGATGACAGAGACTCACAGGGAACTGCAGAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048028.15 ENSMUST00000160729.8 ENSMUST00000162245.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTAAGCTCAGCTCCTGGTaGCTGTACAGCCCTGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLLLTQGLAVVSGEGERPKLSSW*LYSPAR Trigger: TCTGGCAGGGCTGTACAGCAACCAGGAGCTGAGCTT...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGGATGGTTAGGTGCCTaGGAGACACGCTGCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: LLPSAHSRTCSGKWRRGEGWLGA*ETRCRH Trigger: GTGTCTGCAGCGTGTCTCCAAGGCACCTAACCATCC...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS TCA 90 bp | CTGCATCTGCTGAGAACTTGGCAAGGAGCTGGGGCAAGAGGGGGATaGGGTGCTCAGCCAGCTTCATCTTATCATAGGCTTGAAGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LHLLRTWQGAGARGG*GAQPASSYHRLEAC Trigger: GCAAGCTTCAAGCCTATGATAAGATGAAGCTGGCTGAGCACCTCATCCCCCTCTTGCCCCAGCTCCTTGCCAAGTTCTCAGCAGATGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCTGCTGGAACAGCTTaGGGTGGTTGCTTTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLPSAHSRTCSGKWRRGEAAGTA*GGCFAA Trigger: AGCAGCAAAGCAACCACCCAAAGCTGTTCCAGCAGC...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS GCA 90 bp | TGCATCCAGCTCCAATACCCCATAAAGCAGCAGCTTACAAAATCCTaGAAGCAGGCGGCGCCTCTGGTGCAGAAGTTCTATCTGGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: CIQLQYPIKQQLTKS*KQAAPLVQKFYLDV Trigger: CACGTCCAGATAGAACTTCTGCACCAGAGGCGCCGCCTGCTTGCAGGATTTTGTAAGCTGCTGCTTTATGGGGTATTGGAGCTGGATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS CCA 90 bp | TTCTTCCATAAGGCTGAGTCTGCAGATCAGCTCTGGTCCTGGTCCTaGTCCTGGTCCTGGTCTACCTTTTTGCTTCTTGCCCACTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FFHKAESADQLWSWS*SWSWSTFLLLAHCP Trigger: AGGACAGTGGGCAAGAAGCAAAAAGGTAGACCAGGACCAGGACCAGGACCAGGACCAGAGCTGATCTGCAGACTCAGCCTTATGGAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160849.2 |
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| CDS-3UTR CAA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTGCTGGGTCCAGACCTaGTCTCCACGTTGCCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: PYPTPITANRQKHKAMAHCWVQT*SPRCHS Trigger: AGAATGGCAACGTGGAGACAAGGTCTGGACCCAGCA...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159189.2 |
||
| CDS CCA 90 bp | GGGTCAGGTCATGAGCATTGTAAAAGGCAGAGAGACGCTTCAGGGTaGCTGTCAGGCTGTATACCTCATCCTCATCTAGGAAGGATGACT | + |
|
Preference number: 5 (lower is better) Translates to: GSGHEHCKRQRDASG*LSGCIPHPHLGRMT Trigger: AGTCATCCTTCCTAGATGAGGATGAGGTATACAGCCTGACAGCCACCCTGAAGCGTCTCTCTGCCTTTTACAATGCTCATGACCTGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS CCA 90 bp | AAAGCCTGCTCCTGGATCTCTGGGTCCACGTCTGAGAGGCAGCTTTaGCAAAGCTCACAGAAGGCTACCATTCTTTTCTTCAGACTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KACSWISGSTSERQL*QSSQKATILFFRLI Trigger: GATGAGTCTGAAGAAAAGAATGGTAGCCTTCTGTGAGCTTTGCCAAAGCTGCCTCTCAGACGTGGACCCAGAGATCCAGGAGCAGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CAA 90 bp | CTCCTTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGAACAGCTTTGGGTGGTaGCTTTGCTGCTCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLPSAHSRTCSGKWRRGENSFGW*LCCSLL Trigger: AAGAAGAGAGCAGCAAAGCAACCACCCAAAGCTGTT...CTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CAA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTTCAGACAATGAGAACTaGATGCCTTCCTTGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLLLTQGLAVVSGEGERPSDNEN*MPSLCS Trigger: GCTGCACAAGGAAGGCATCAAGTTCTCATTGTCTGA...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS CCA 90 bp | AGGAACTTCTCCTGTGTCTACAGCCTTCCGGAGGAGTCGAGAACATaGTTCAGAGATCTCCCATCGGGTCAGGTCATGAGCATTGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RNFSCVYSLPEESRT*FRDLPSGQVMSIVK Trigger: TTTTACAATGCTCATGACCTGACCCGATGGGAGATCTCTGAACCATGTTCTCGACTCCTCCGGAAGGCTGTAGACACAGGAGAAGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS GCA 90 bp | GCCATTCCCACTAGATACTATTCGGGACTGCTTCTTCCGATGTTTTaGTGCTGGAACAGCTTTGGGTGGTTGCTTTGCTGCTCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AIPTRYYSGLLLPMF*CWNSFGWLLCCSLL Trigger: AAGAAGAGAGCAGCAAAGCAACCACCCAAAGCTGTTCCAGCAGCAAAACATCGGAAGAAGCAGTCCCGAATAGTATCTAGTGGGAATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048028.15 ENSMUST00000160729.8 ENSMUST00000161691.2 ENSMUST00000162245.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTTCTGCTCACTCAAGGACTTGCAGTGGTAAGTGGAGAAGGGGAGAGGCCTGTCCTCTTGATTCTCTaGGAACTCTTTTCGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLLLTQGLAVVSGEGERPVLLIL*ELFSFL Trigger: GAGAAACGAAAAGAGTTCCAAGAGAATCAAGAGGAC...AGGCCTCTCCCCTTCTCCACTTACCACTGCAAGTCCTTGAGTGAGCAGAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CAA 90 bp | CCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTCAGACAATGAGAACTaGATGCCTTCCTTGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PYPTPITANRQKHKAMAHSDNEN*MPSLCS Trigger: GCTGCACAAGGAAGGCATCAAGTTCTCATTGTCTGA...ATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS TCA 90 bp | GAGAACTCTGAAAGAAGCTCCAGGAATGCAAGATTTGGGGGCTCATaGGAAGAACCAGCAGGAGGAAGCTCAGACAATGAGAACTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ENSERSSRNARFGGS*EEPAGGSSDNENLM Trigger: CATCAAGTTCTCATTGTCTGAGCTTCCTCCTGCTGGTTCTTCTCATGAGCCCCCAAATCTTGCATTCCTGGAGCTTCTTTCAGAGTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS GCA 90 bp | ATTCCCACTAGATACTATTCGGGACTGCTTCTTCCGATGTTTTGCTaGTGGAACAGCTTTGGGTGGTTGCTTTGCTGCTCTCTTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: IPTRYYSGLLLPMFC*WNSFGWLLCCSLLH Trigger: GTGAAGAAGAGAGCAGCAAAGCAACCACCCAAAGCTGTTCCAGCAGCAAAACATCGGAAGAAGCAGTCCCGAATAGTATCTAGTGGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048028.15 ENSMUST00000160729.8 ENSMUST00000161691.2 ENSMUST00000162245.8 |
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| CDS-3UTR CAA 90 bp | CGTAAAGCCCTCCCTACCCAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGACGTCTCACAGACTTTaGAAGTGGGGAAGACTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RKALPTQLLSLQTGKSIKTSHRL*KWGRLT Trigger: AGTGAGTCTTCCCCACTTCAAAAGTCTGTGAGACGT...CTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CAA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGTCCTGGTCTACCTTTTaGCTTCTTGCCCACTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKSWSTF*LLAHCP Trigger: AGGACAGTGGGCAAGAAGCAAAAAGGTAGACCAGGA...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS TCA 90 bp | AAGACACCTCTGAAGATGGCATTCATCATCCCCTCTATGTCCTCTTaGTTCTCTTGGAACTCTTTTCGTTTCTCCAGCAGACTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KTPLKMAFIIPSMSS*FSWNSFRFSSRLSS Trigger: ACTGGAGAGTCTGCTGGAGAAACGAAAAGAGTTCCAAGAGAATCAAGAGGACATAGAGGGGATGATGAATGCCATCTTCAGAGGTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CAA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTAAGCTCAGCTCCTGGTaGCTGTACAGCCCTGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFPLKYLARTQRMLHFTPKLSSW*LYSPAR Trigger: TCTGGCAGGGCTGTACAGCAACCAGGAGCTGAGCTT...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CAA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTGGATGGTTAGGTGCCTaGGAGACACGCTGCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: SFPLKYLARTQRMLHFTPGWLGA*ETRCRH Trigger: GTGTCTGCAGCGTGTCTCCAAGGCACCTAACCATCC...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS TCA 90 bp | GTCACCATAGTCTTCATAGAACTTGTTGTAGTGTTTGAAAACGTCTaGGGCTGCATCCAGCTCCAATACCCCATAAAGCAGCAGCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: VTIVFIELVVVFENV*GCIQLQYPIKQQLT Trigger: TGTAAGCTGCTGCTTTATGGGGTATTGGAGCTGGATGCAGCCTCAGACGTTTTCAAACACTACAACAAGTTCTATGAAGACTATGGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CCA 90 bp | TCATCAAGCTCCTGCTGGAATCTATCAGTCAGAAAATCTACTAATTaGCTTCTGGCAAAGTCCACTCTGCTGAAGAAGGTGAACTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSSCWNLSVRKSTN*LLAKSTLLKKVNSG Trigger: ACCAGAGTTCACCTTCTTCAGCAGAGTGGACTTTGCCAGAAGCCAATTAGTAGATTTTCTGACTGATAGATTCCAGCAGGAGCTTGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CAA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGGGCACTGATTCATTCTaGCCATTCCCACTAGATACT | + |
|
Preference number: 5 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKGTDSF*PFPLDT Trigger: AGTATCTAGTGGGAATGGCAAGAATGAATCAGTGCC...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CAA 90 bp | CAACTCCTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATCCATGTTCAGCTCTGTaGTATCTAATAGGTCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: QLLSLQTGKSIKRWRIKDPCSAL*YLIGPT Trigger: GGTTGGACCTATTAGATACAACAGAGCTGAACATGG...ATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAGGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CAA 90 bp | CTATCACTGCAAACAGGCAAAAGCATAAAGCGATGGCGCATTAAGGATGACAAGCCATGTTCAGCTCTGTaGTATCTAATAGGTCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: LSLQTGKSIKRWRIKDDKPCSAL*YLIGPT Trigger: GGTTGGACCTATTAGATACAACAGAGCTGAACATGG...CTTGTCATCCTTAATGCGCCATCGCTTTATGCTTTTGCCTGTTTGCAGTGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS GCA 90 bp | TCATCCTCATCTAGGAAGGATGACTGCATTAGGTCATCAAGCTCCTaGTGGAATCTATCAGTCAGAAAATCTACTAATTGGCTTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSRKDDCIRSSSS*WNLSVRKSTNWLLA Trigger: TGCCAGAAGCCAATTAGTAGATTTTCTGACTGATAGATTCCAGCAGGAGCTTGATGACCTAATGCAGTCATCCTTCCTAGATGAGGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS CCA 90 bp | TCCTCATCTAGGAAGGATGACTGCATTAGGTCATCAAGCTCCTGCTaGAATCTATCAGTCAGAAAATCTACTAATTGGCTTCTGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSRKDDCIRSSSSC*NLSVRKSTNWLLAK Trigger: CTTTGCCAGAAGCCAATTAGTAGATTTTCTGACTGATAGATTCCAGCAGGAGCTTGATGACCTAATGCAGTCATCCTTCCTAGATGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CAA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATACGTCTCACAGACTTTaGAAGTGGGGAAGACTCACT | + |
|
Preference number: 5 (lower is better) Translates to: GHFSFPLKYLARTQRMLHTSHRL*KWGRLT Trigger: AGTGAGTCTTCCCCACTTCAAAAGTCTGTGAGACGT...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CAA 90 bp | GGCCATTTCTCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATAACAGCTTTGGGTGGTaGCTTTGCTGCTCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GHFSFPLKYLARTQRMLHNSFGW*LCCSLL Trigger: AAGAAGAGAGCAGCAAAGCAACCACCCAAAGCTGTT...ATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGAGAAATGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTGGTCTACCTTTTaGCTTCTTGCCCACTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SFPLKYLARTQRMLHFTPSWSTF*LLAHCP Trigger: AGGACAGTGGGCAAGAAGCAAAAAGGTAGACCAGGA...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS GCA 90 bp | AGCACGATTAGAAATGTATACAATGGAGTAAATTTTCTCACAGTCTaGACTAGTCAGCACTCCCTCCATGTTCTTCAGAATAAGGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: STIRNVYNGVNFLTV*TSQHSLHVLQNKGQ Trigger: CTGACCCTTATTCTGAAGAACATGGAGGGAGTGCTGACTAGTGCAGACTGTGAGAAAATTTACTCCATTGTATACATTTCTAATCGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCGTCCTCTTGATTCTCTaGGAACTCTTTTCGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LKYLARTQRMLHFTPSFCVLLIL*ELFSFL Trigger: GAGAAACGAAAAGAGTTCCAAGAGAATCAAGAGGAC...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTGGCACTGATTCATTCTaGCCATTCCCACTAGATACT | + |
|
Preference number: 5 (lower is better) Translates to: SFPLKYLARTQRMLHFTPGTDSF*PFPLDT Trigger: AGTATCTAGTGGGAATGGCAAGAATGAATCAGTGCC...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS TCA 90 bp | CATTCTTTTCTTCAGACTCATCAGCTGCTTATGAGAAGTAGACTCTaGAATGTGGGTTACTGTCCAGAGAATGGAAAAATATACCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HSFLQTHQLLMRSRL*NVGYCPENGKIYQS Trigger: ACTCTGGTATATTTTTCCATTCTCTGGACAGTAACCCACATTTCAGAGTCTACTTCTCATAAGCAGCTGATGAGTCTGAAGAAAAGAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCCAAAAAGGTAATTGGTaGATGGCACTGATTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKYLARTQRMLHFTPSFCQKGNW*MALIHS Trigger: AGAATGAATCAGTGCCATCAACCAATTACCTTTTTG...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTTCCTTCTGCATCTGTCAATTTGTCTaGCTCGAGTTAATGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LKYLARTQRMLHFTPSFCICQFV*LELMFP Trigger: AGGAAACATTAACTCGAGCAAGACAAATTGACAGAT...GCAGAAGGAAGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS-3UTR CAA 90 bp | TCTTTTCCTTTAAAGTACTTGGCTAGGACCCAAAGAATGCTTCATTTTACTCCTCAAAAAGGTAATTGGTaGATGGCACTGATTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFPLKYLARTQRMLHFTPQKGNW*MALIHS Trigger: AGAATGAATCAGTGCCATCAACCAATTACCTTTTTG...AGGAGTAAAATGAAGCATTCTTTGGGTCCTAGCCAAGTACTTTAAAGGAAAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CCA 72 bp | GGCCGTCAGACTCTTCTTTCCAGTGATGCGCCCCACTaGAGGGTGACCCTCTGCAGCTTGCCGGGCACTAGA | + |
|
Preference number: 6 (lower is better) Translates to: GRQTLLSSDAPH*RVTLCSLPGTR Trigger: TCTAGTGCCCGGCAAGCTGCAGAGGGTCACCCTCCAGTGGGGCGCATCACTGGAAAGAAGAGTCTGACGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS TCA 72 bp | AGACTCTTCTTTCCAGTGATGCGCCCCACTGGAGGGTaGCCCTCTGCAGCTTGCCGGGCACTAGACACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLFFPVMRPTGG*PSAACRALDTR Trigger: CCTTGTGTCTAGTGCCCGGCAAGCTGCAGAGGGTCACCCTCCAGTGGGGCGCATCACTGGAAAGAAGAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CCA 72 bp | AAACCTCCGAGCCAAGTCTCTCATCTCAATGAAGGCTaGCAGTTCTGTCAGGCCCTGGGGGCCCTGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KPPSQVSHLNEG*QFCQALGALLL Trigger: CAGGAGCAGGGCCCCCAGGGCCTGACAGAACTGCCAGCCTTCATTGAGATGAGAGACTTGGCTCGGAGGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS TCA 72 bp | GCTTGCGTTCTTTGGCCGTCAGACTCTTCTTTCCAGTaGTGCGCCCCACTGGAGGGTGACCCTCTGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ACVLWPSDSSFQ*CAPLEGDPLQL Trigger: AAGCTGCAGAGGGTCACCCTCCAGTGGGGCGCATCACTGGAAAGAAGAGTCTGACGGCCAAAGAACGCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CAA 90 bp | TCTGGTCCTGGTCCTGGTCCTGGTCCTGGTCTACCTTTTTGCTTCTaGCCCACTGTCCTCAGAGACTGCTTCCTCTTCACTGCGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGPGPGPGPGLPFCF*PTVLRDCFLFTAVE Trigger: CTCCACCGCAGTGAAGAGGAAGCAGTCTCTGAGGACAGTGGGCAAGAAGCAAAAAGGTAGACCAGGACCAGGACCAGGACCAGGACCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048028.15 ENSMUST00000160849.2 ENSMUST00000162245.8 |
||
| CDS GCA 72 bp | GCAGTAGGTGGTGACTGGACCCCAGGGATGGTTAGGTaGCTTGGAGACACGCTGCAGACACTTTTCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: AVGGDWTPGMVR*LGDTLQTLFQV Trigger: TACCTGGAAAAGTGTCTGCAGCGTGTCTCCAAGGCACCTAACCATCCCTGGGGTCCAGTCACCACCTACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048028.15 ENSMUST00000160849.2 ENSMUST00000162245.8 |
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| CDS GCA 72 bp | GGTCCTGGTCCTGGTCCTGGTCCTGGTCTACCTTTTTaGTTCTTGCCCACTGTCCTCAGAGACTGCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPGPGPGPGLPF*FLPTVLRDCFL Trigger: GAGGAAGCAGTCTCTGAGGACAGTGGGCAAGAAGCAAAAAGGTAGACCAGGACCAGGACCAGGACCAGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048028.15 ENSMUST00000160849.2 ENSMUST00000162245.8 |
||
| CDS CCA 72 bp | ACATTCTCTGCATCTGCTGAGAACTTGGCAAGGAGCTaGGGCAAGAGGGGGATGAGGTGCTCAGCCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TFSASAENLARS*GKRGMRCSASF Trigger: GAAGCTGGCTGAGCACCTCATCCCCCTCTTGCCCCAGCTCCTTGCCAAGTTCTCAGCAGATGCAGAGAATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS TCA 72 bp | GACAAAAGCCTGCTCCTGGATCTCTGGGTCCACGTCTaGGAGGCAGCTTTGGCAAAGCTCACAGAAGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: DKSLLLDLWVHV*EAALAKLTEGY Trigger: GTAGCCTTCTGTGAGCTTTGCCAAAGCTGCCTCTCAGACGTGGACCCAGAGATCCAGGAGCAGGCTTTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS TCA 72 bp | CTCGACATCTTCAACCTCTGGGTGCCTAAGAGTTGCTaGCTGCAGATCAGCTCTGGTCCTGGTCCTGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LDIFNLWVPKSC*LQISSGPGPGP Trigger: AGGACCAGGACCAGGACCAGAGCTGATCTGCAGTCAGCAACTCTTAGGCACCCAGAGGTTGAAGATGTCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS TCA 72 bp | GCTGAGTCGGGTCAGCTGCTTGCCCAAGCCAGAGCCTaGAGGATCACATCGAATCTGGAAACATGGTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: AESGQLLAQARA*RITSNLETWCT Trigger: AGTGCACCATGTTTCCAGATTCGATGTGATCCTTCAGGCTCTGGCTTGGGCAAGCAGCTGACCCGACTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS GCA 72 bp | TTGTGCAGCATGACCACAAGATCTCGGTTATGGAGCTaGTGGGGTCCAAAGCTCAAGGCAAACCTCCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LCSMTTRSRLWS*WGPKLKANLRA Trigger: GGCTCGGAGGTTTGCCTTGAGCTTTGGACCCCAGCAGCTCCATAACCGAGATCTTGTGGTCATGCTGCACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CCA 72 bp | TCCTGTGTCTACAGCCTTCCGGAGGAGTCGAGAACATaGTTCAGAGATCTCCCATCGGGTCAGGTCATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCVYSLPEESRT*FRDLPSGQVMS Trigger: GCTCATGACCTGACCCGATGGGAGATCTCTGAACCATGTTCTCGACTCCTCCGGAAGGCTGTAGACACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CCA 72 bp | TGCAGCATGACCACAAGATCTCGGTTATGGAGCTGCTaGGGTCCAAAGCTCAAGGCAAACCTCCGAGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: CSMTTRSRLWSC*GPKLKANLRAK Trigger: CTTGGCTCGGAGGTTTGCCTTGAGCTTTGGACCCCAGCAGCTCCATAACCGAGATCTTGTGGTCATGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CAA 90 bp | CTCAAGCACCTCAGGCTCTACATGCTTCACCACCACCTCCTGGAGTaGTTGCAGAAGCAGCTCCAAGTGCTTTTCCAAGCGCTGAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LKHLRLYMLHHHLLE*LQKQLQVLFQALSA Trigger: TGCACTCAGCGCTTGGAAAAGCACTTGGAGCTGCTTCTGCAACAACTCCAGGAGGTGGTGGTGAAGCATGTAGAGCCTGAGGTGCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS TCA 72 bp | CTGAGAACTTGGCAAGGAGCTGGGGCAAGAGGGGGATaGGGTGCTCAGCCAGCTTCATCTTATCATAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LRTWQGAGARGG*GAQPASSYHRL Trigger: AAGCCTATGATAAGATGAAGCTGGCTGAGCACCTCATCCCCCTCTTGCCCCAGCTCCTTGCCAAGTTCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS TCA 72 bp | CTGGTGCAGAAGTTCTATCTGGACGTGATCCTCCTGTaGCTGACCGTTGCCCAGTTCTCCAGGCTGGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LVQKFYLDVILL*LTVAQFSRLEK Trigger: TTTCTCCAGCCTGGAGAACTGGGCAACGGTCAGTCACAGGAGGATCACGTCCAGATAGAACTTCTGCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS GCA 72 bp | GTTCTATCTGGACGTGATCCTCCTGTGACTGACCGTTaGCCAGTTCTCCAGGCTGGAGAAAGACATGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLSGRDPPVTDR*PVLQAGERHGP Trigger: TGGACCATGTCTTTCTCCAGCCTGGAGAACTGGGCAACGGTCAGTCACAGGAGGATCACGTCCAGATAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CCA 72 bp | CAGTTCCCTGTGAGTCTCTGTCATCACAGGGTAGGATaGAGGAGGAACAAGGAGACAAGGCCATCTGTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: QFPVSLCHHRVG*RRNKETRPSVH Trigger: GTGCACAGATGGCCTTGTCTCCTTGTTCCTCCTCCATCCTACCCTGTGATGACAGAGACTCACAGGGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048028.15 ENSMUST00000160729.8 ENSMUST00000162245.8 |
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| CDS CCA 72 bp | TCTGGCAAAGTCCACTCTGCTGAAGAAGGTGAACTCTaGTTTGCAGAGCAGATAGAGGGCATGGGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGKVHSAEEGEL*FAEQIEGMGCC Trigger: GCAGCAGCCCATGCCCTCTATCTGCTCTGCAAACCAGAGTTCACCTTCTTCAGCAGAGTGGACTTTGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CCA 72 bp | GTGTCTCCGGCTCTACATTCTAGGAGAAGGGACTGCTaGGTCCAGACCTTGTCTCCACGTTGCCATTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VSPALHSRRRDC*VQTLSPRCHSS Trigger: TGAAGAATGGCAACGTGGAGACAAGGTCTGGACCCAGCAGTCCCTTCTCCTAGAATGTAGAGCCGGAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159189.2 |
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| CDS CAA 72 bp | TCATCTTCTTCCATAAGGCTGAGTCGGGTCAGCTGCTaGCCCAAGCCAGAGCCTGAAGGATCACATCGAATC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSIRLSRVSC*PKPEPEGSHRI Trigger: GATTCGATGTGATCCTTCAGGCTCTGGCTTGGGCAAGCAGCTGACCCGACTCAGCCTTATGGAAGAAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CAA 90 bp | AAGCACCTCAGGCTCTACATGCTTCACCACCACCTCCTGGAGTTGTaGCAGAAGCAGCTCCAAGTGCTTTTCCAAGCGCTGAGTGCAATA | + |
|
Preference number: 6 (lower is better) Translates to: KHLRLYMLHHHLLEL*QKQLQVLFQALSAI Trigger: TATTGCACTCAGCGCTTGGAAAAGCACTTGGAGCTGCTTCTGCAACAACTCCAGGAGGTGGTGGTGAAGCATGTAGAGCCTGAGGTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CAA 90 bp | TCTGGGCTTGTGGACTCCGGCGTCGCTCTCTATCACTCACTGCTTTaGCCCCACATTCAGGATGGAAGATCTTCCAATACACAAATTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGLVDSGVALYHSLL*PHIQDGRSSNTQIP Trigger: GGGAATTTGTGTATTGGAAGATCTTCCATCCTGAATGTGGGGCAAAAGCAGTGAGTGATAGAGAGCGACGCCGGAGTCCACAAGCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS GCA 72 bp | CTCCAATACCCCATAAAGCAGCAGCTTACAAAATCCTaGAAGCAGGCGGCGCCTCTGGTGCAGAAGTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: LQYPIKQQLTKS*KQAAPLVQKFY Trigger: ATAGAACTTCTGCACCAGAGGCGCCGCCTGCTTGCAGGATTTTGTAAGCTGCTGCTTTATGGGGTATTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS GCA 72 bp | AGAAGGGACTGCTGGGTCCAGACCTTGTCTCCACGTTaGCATTCTTCATCCAGAAGTCTTAGCTCTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRDCWVQTLSPR*HSSSRSLSSSS Trigger: GGAAGAAGAGCTAAGACTTCTGGATGAAGAATGGCAACGTGGAGACAAGGTCTGGACCCAGCAGTCCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159189.2 |
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| CDS CCA 72 bp | TCCTGGATCTCTGGGTCCACGTCTGAGAGGCAGCTTTaGCAAAGCTCACAGAAGGCTACCATTCTTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SWISGSTSERQL*QSSQKATILFF Trigger: GAAGAAAAGAATGGTAGCCTTCTGTGAGCTTTGCCAAAGCTGCCTCTCAGACGTGGACCCAGAGATCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CAA 72 bp | GTGGACTCCGGCGTCGCTCTCTATCACTCACTGCTTTaGCCCCACATTCAGGATGGAAGATCTTCCAATACA | + |
|
Preference number: 6 (lower is better) Translates to: VDSGVALYHSLL*PHIQDGRSSNT Trigger: TGTATTGGAAGATCTTCCATCCTGAATGTGGGGCAAAAGCAGTGAGTGATAGAGAGCGACGCCGGAGTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CAA 90 bp | CAAGAGGGGGATGAGGTGCTCAGCCAGCTTCATCTTATCATAGGCTaGAAGCTTGCGTTCTTTGGCCGTCAGACTCTTCTTTCCAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: QEGDEVLSQLHLIIG*KLAFFGRQTLLSSD Trigger: ATCACTGGAAAGAAGAGTCTGACGGCCAAAGAACGCAAGCTTCAAGCCTATGATAAGATGAAGCTGGCTGAGCACCTCATCCCCCTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CAA 90 bp | TCTTCTTCCTCATCTTCTTCCATAAGGCTGAGTCGGGTCAGCTGCTaGCCCAAGCCAGAGCCTGAAGGATCACATCGAATCTGGAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSSIRLSRVSC*PKPEPEGSHRIWKH Trigger: ATGTTTCCAGATTCGATGTGATCCTTCAGGCTCTGGCTTGGGCAAGCAGCTGACCCGACTCAGCCTTATGGAAGAAGATGAGGAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS TCA 72 bp | CTCATGAGAAGAACCAGCAGGAGGAAGCTCAGACAATaGGAACTTGATGCCTTCCTTGTGCAGCATGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: LMRRTSRRKLRQ*ELDAFLVQHDH Trigger: GTGGTCATGCTGCACAAGGAAGGCATCAAGTTCTCATTGTCTGAGCTTCCTCCTGCTGGTTCTTCTCATGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CCA 72 bp | CATGAGCATTGTAAAAGGCAGAGAGACGCTTCAGGGTaGCTGTCAGGCTGTATACCTCATCCTCATCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HEHCKRQRDASG*LSGCIPHPHLG Trigger: TCCTAGATGAGGATGAGGTATACAGCCTGACAGCCACCCTGAAGCGTCTCTCTGCCTTTTACAATGCTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS TCA 72 bp | AGAGGCCTAAGGAAATCCCGTCCCCCTACAATCATCTaGGGGCTGAAGATGAGAAGCAGGTCACTTAATAAG | + |
|
Preference number: 6 (lower is better) Translates to: RGLRKSRPPTII*GLKMRSRSLNK Trigger: CTTATTAAGTGACCTGCTTCTCATCTTCAGCCCTCAGATGATTGTAGGGGGACGGGATTTCCTTAGGCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CCA 72 bp | GCTCTGTTGTATCTAATAGGTCCAACCCATGCTCACTaGGAGAAGAAGGGCTATGAAGCATCTTGTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ALLYLIGPTHAH*EKKGYEASCLH Trigger: GTGGAGACAAGATGCTTCATAGCCCTTCTTCTCCCAGTGAGCATGGGTTGGACCTATTAGATACAACAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CAA 72 bp | GATGAGGTGCTCAGCCAGCTTCATCTTATCATAGGCTaGAAGCTTGCGTTCTTTGGCCGTCAGACTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: DEVLSQLHLIIG*KLAFFGRQTLL Trigger: AAGAAGAGTCTGACGGCCAAAGAACGCAAGCTTCAAGCCTATGATAAGATGAAGCTGGCTGAGCACCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CAA 72 bp | GAAGAACCAGCAGGAGGAAGCTCAGACAATGAGAACTaGATGCCTTCCTTGTGCAGCATGACCACAAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: EEPAGGSSDNEN*MPSLCSMTTRS Trigger: AGATCTTGTGGTCATGCTGCACAAGGAAGGCATCAAGTTCTCATTGTCTGAGCTTCCTCCTGCTGGTTCTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CAA 90 bp | TCTGAAGATGGCATTCATCATCCCCTCTATGTCCTCTTGATTCTCTaGGAACTCTTTTCGTTTCTCCAGCAGACTCTCCAGTCGTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SEDGIHHPLYVLLIL*ELFSFLQQTLQSFR Trigger: CCGGAACGACTGGAGAGTCTGCTGGAGAAACGAAAAGAGTTCCAAGAGAATCAAGAGGACATAGAGGGGATGATGAATGCCATCTTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS TCA 72 bp | AGCTGCTTTAGGCTCAGGAGCAGGATCCGAGAGCACTaGCATCTGTCAATTTGTCTTGCTCGAGTTAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: SCFRLRSRIREH*HLSICLARVNV Trigger: AACATTAACTCGAGCAAGACAAATTGACAGATGTCAGTGCTCTCGGATCCTGCTCCTGAGCCTAAAGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS CAA 90 bp | AAAGACACCTCTGAAGATGGCATTCATCATCCCCTCTATGTCCTCTaGATTCTCTTGGAACTCTTTTCGTTTCTCCAGCAGACTCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KDTSEDGIHHPLYVL*ILLELFSFLQQTLQ Trigger: CTGGAGAGTCTGCTGGAGAAACGAAAAGAGTTCCAAGAGAATCAAGAGGACATAGAGGGGATGATGAATGCCATCTTCAGAGGTGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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| CDS GCA 72 bp | AGGCTGTATACCTCATCCTCATCTAGGAAGGATGACTaGATTAGGTCATCAAGCTCCTGCTGGAATCTATCA | + |
|
Preference number: 6 (lower is better) Translates to: RLYTSSSSRKDD*IRSSSSCWNLS Trigger: TGATAGATTCCAGCAGGAGCTTGATGACCTAATGCAGTCATCCTTCCTAGATGAGGATGAGGTATACAGCCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS TCA 72 bp | GTCTTCATAGAACTTGTTGTAGTGTTTGAAAACGTCTaGGGCTGCATCCAGCTCCAATACCCCATAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VFIELVVVFENV*GCIQLQYPIKQ Trigger: CTGCTTTATGGGGTATTGGAGCTGGATGCAGCCTCAGACGTTTTCAAACACTACAACAAGTTCTATGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS TCA 72 bp | TGTCACCATAGTCTTCATAGAACTTGTTGTAGTGTTTaGAAACGTCTGAGGCTGCATCCAGCTCCAATACCC | + |
|
Preference number: 6 (lower is better) Translates to: CHHSLHRTCCSV*KRLRLHPAPIP Trigger: GGGTATTGGAGCTGGATGCAGCCTCAGACGTTTTCAAACACTACAACAAGTTCTATGAAGACTATGGTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS CCA 72 bp | TCCTGCTGGAATCTATCAGTCAGAAAATCTACTAATTaGCTTCTGGCAAAGTCCACTCTGCTGAAGAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SCWNLSVRKSTN*LLAKSTLLKKV Trigger: CACCTTCTTCAGCAGAGTGGACTTTGCCAGAAGCCAATTAGTAGATTTTCTGACTGATAGATTCCAGCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS CCA 72 bp | AGGAAGGATGACTGCATTAGGTCATCAAGCTCCTGCTaGAATCTATCAGTCAGAAAATCTACTAATTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RKDDCIRSSSSC*NLSVRKSTNWL Trigger: AAGCCAATTAGTAGATTTTCTGACTGATAGATTCCAGCAGGAGCTTGATGACCTAATGCAGTCATCCTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS TCA 72 bp | CTTCAGACTCATCAGCTGCTTATGAGAAGTAGACTCTaGAATGTGGGTTACTGTCCAGAGAATGGAAAAATA | + |
|
Preference number: 6 (lower is better) Translates to: LQTHQLLMRSRL*NVGYCPENGKI Trigger: TATTTTTCCATTCTCTGGACAGTAACCCACATTTCAGAGTCTACTTCTCATAAGCAGCTGATGAGTCTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
||
| CDS GCA 72 bp | AGAAATGTATACAATGGAGTAAATTTTCTCACAGTCTaGACTAGTCAGCACTCCCTCCATGTTCTTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: RNVYNGVNFLTV*TSQHSLHVLQN Trigger: ATTCTGAAGAACATGGAGGGAGTGCTGACTAGTGCAGACTGTGAGAAAATTTACTCCATTGTATACATTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048028.15 ENSMUST00000162245.8 |
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