Pregenerated sensors for STAC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040287Ensembl transcript IDs: ENSMUST00000035839.3, ENSMUST00000160019.8
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTaGGAACCAGACCCTCCCCAGAAACGTCATTATGCTCTGGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: CSAHQVSGALGRGER*EPDPPQKRHYALVG Trigger: GCCCACCAGAGCATAATGACGTTTCTGGGGAGGGTCTGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAGCCCAGAACGAGGAGTaGGTGTCTCCCGCCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: CSAHQVSGALGRGERWEPAQNEE*VSPASR Trigger: CCTGCTGGCGGGAGACACCCACTCCTCGTTCTGGGC...TGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| 3UTR-3UTR CCA 90 bp | TTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCCCTCCCCAGCTCGCACTaGGCCCCGCCCAGAACGAGG | + |
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Preference number: 2 (lower is better) Translates to: LINSKHLTVLPLLMEMLPLPSSH*APPRTR Trigger: CCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAG...GGGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| 3UTR CCA 72 bp | CACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTaGGAACCAGACCCTCCCCAGAAACGTCATTATGCT | + |
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Preference number: 3 (lower is better) Translates to: HQVSGALGRGER*EPDPPQKRHYA Trigger: AGCATAATGACGTTTCTGGGGAGGGTCTGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| 3UTR CCA 72 bp | GGGAACCAGACCCTCCCCAGAAACGTCATTATGCTCTaGTGGGCCTTTCCGACCCTCCTCATCCAGTACTCC | + |
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Preference number: 3 (lower is better) Translates to: GNQTLPRNVIML*WAFPTLLIQYS Trigger: GGAGTACTGGATGAGGAGGGTCGGAAAGGCCCACCAGAGCATAATGACGTTTCTGGGGAGGGTCTGGTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCTCTCCATTGGCTTaGGGCTCTGGGGGAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FPPQLALGPAQNEEWVSPASPLA*GSGGGS Trigger: GGAGCCTCCCCCAGAGCCCCAAGCCAATGGAGAGGC...GGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | GGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGCCACCGCCTCTCCATTaGCTTGGGGCTCTGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GAGCSAHQVSGALGRGERPPPLH*LGALGE Trigger: CTCCCCCAGAGCCCCAAGCCAATGGAGAGGCGGTGG...CCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | CCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCAGCAGGAGGTTCTGGGGGTaGTTCCTCCTCTTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PQLALGPAQNEEWVSPASRRFWG*FLLFLL Trigger: GAGGAGGAAGAGGAGGAACCACCCCCAGAACCTCCT...GCTGGCGGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCAGCACCTCCAGGAAGTCGGTaGGAAACAGCCCCACCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PSSHWAPPRTRSGCLPPAPPGSR*ETAPPC Trigger: GCAAGGTGGGGCTGTTTCCCACCGACTTCCTGGAGG...TGCTGGCGGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR TCA 90 bp | CCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCAGCGGCCGGTGTAGACCTTaGCGTAACCACCAGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: PQLALGPAQNEEWVSPASGRCRP*RNHQLH Trigger: ATGAAGCTGGTGGTTACGTCAAGGTCTACACCGGCC...GCTGGCGGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR GCA 90 bp | CCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCAGCATTCCATCCTGTGACTTaGCCTCCTCTGGCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PSSHWAPPRTRSGCLPPAFHPVT*PPLAWL Trigger: CAGCCAGGCCAGAGGAGGGCAAGTCACAGGATGGAA...TGCTGGCGGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR GCA 90 bp | GGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGGATCTGGTCACGCGGTaGACACGTTCTCCAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: GAGCSAHQVSGALGRGERDLVTR*TRSPAR Trigger: GCGGGCTGGAGAACGTGTGCACCGCGTGACCAGATC...CCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCATTGGCTTGGGGCTCTaGGGGAGGCTCCATCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: FPPQLALGPAQNEEWVSPIGLGL*GRLHLS Trigger: GCTGAGATGGAGCCTCCCCCAGAGCCCCAAGCCAAT...GGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | CCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCAGCGAGCTTAGGAGGTTCTaGGGGTGGTTCCTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PQLALGPAQNEEWVSPASELRRF*GWFLLF Trigger: GAAGAGGAGGAACCACCCCCAGAACCTCCTAAGCTC...GCTGGCGGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR TCA 90 bp | GGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGGTTCCTTGTTTGCCATaGTCACCCCGACGCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GAGCSAHQVSGALGRGERVPCLP*SPRRAG Trigger: CCCTGCGCGTCGGGGTGATCATGGCAAACAAGGAAC...CCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR TCA 90 bp | CCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCAGCATTGTTTCCATCCTGTaGCTTGCCCTCCTCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PQLALGPAQNEEWVSPASIVSIL*LALLWP Trigger: AGGCCAGAGGAGGGCAAGTCACAGGATGGAAACAAT...GCTGGCGGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | CTTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCTTGGTCGCTGTAGAGTaGGGAGCTATAGGCCCGACG | + |
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Preference number: 4 (lower is better) Translates to: LPSPARTGPRPERGVGVSLVAVE*GAIGPT Trigger: CGTCGGGCCTATAGCTCCCCACTCTACAGCGACCAA...GGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR GCA 90 bp | CCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCAGCACAAACACGGGGTCATTaGGATTGGCAGCAGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: PSSHWAPPRTRSGCLPPAQTRGH*DWQQRQ Trigger: CTGTCTCTGCTGCCAATCGCAATGACCCCGTGTTTG...TGCTGGCGGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR GCA 90 bp | TTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCCTTCCGTTCCTTGTTTaGCATGATCACCCCGACGCG | + |
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Preference number: 4 (lower is better) Translates to: FPPQLALGPAQNEEWVSPLPFLV*HDHPDA Trigger: CGCGTCGGGGTGATCATGGCAAACAAGGAACGGAAG...GGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCCATAGATATAGTAGATaGGCCCACCCCCAGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: FPPQLALGPAQNEEWVSPHRYSR*AHPQPP Trigger: TGGGGGCTGGGGGTGGGCCCATCTACTATATCTATG...GGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | CGGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGTTGGTCGCTGTAGAGTaGGGAGCTATAGGCCCGACG | + |
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Preference number: 4 (lower is better) Translates to: RCRLLSAPGIRSPRQGRELVAVE*GAIGPT Trigger: CGTCGGGCCTATAGCTCCCCACTCTACAGCGACCAA...CTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCCGGGGTCATTGCGATTaGCAGCAGAGACAGCGTACT | + |
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Preference number: 4 (lower is better) Translates to: FPPQLALGPAQNEEWVSPRGHCD*QQRQRT Trigger: AGTACGCTGTCTCTGCTGCCAATCGCAATGACCCCG...GGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR TCA 90 bp | TGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAGTTCCTTGTTTGCCATaGTCACCCCGACGCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: CSAHQVSGALGRGERWEPVPCLP*SPRRAG Trigger: CCCTGCGCGTCGGGGTGATCATGGCAAACAAGGAAC...TGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR TCA 90 bp | CGGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGGCCGGTGTAGACCTTaGCGTAACCACCAGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: RCRLLSAPGIRSPRQGREGRCRP*RNHQLH Trigger: ATGAAGCTGGTGGTTACGTCAAGGTCTACACCGGCC...CTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR GCA 90 bp | CCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCAGCCCCTTCTTGAATAACTaGTTCAGTCGCTGTAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PQLALGPAQNEEWVSPASPFLNN*FSRCSP Trigger: TGGGCTACAGCGACTGAAGCAGTTATTCAAGAAGGG...GCTGGCGGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR GCA 90 bp | TTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCCAAACACGGGGTCATTaGGATTGGCAGCAGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: FPPQLALGPAQNEEWVSPQTRGH*DWQQRQ Trigger: CTGTCTCTGCTGCCAATCGCAATGACCCCGTGTTTG...GGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | GGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGCATAGATATAGTAGATaGGCCCACCCCCAGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GAGCSAHQVSGALGRGERHRYSR*AHPQPP Trigger: TGGGGGCTGGGGGTGGGCCCATCTACTATATCTATG...CCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAGACCTCCAGGAAGTCGGTaGGAAACAGCCCCACCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LSAPGIRSPRQGREVGTRPPGSR*ETAPPC Trigger: GCAAGGTGGGGCTGTTTCCCACCGACTTCCTGGAGG...TCTGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR TCA 90 bp | GGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGATTGTTTCCATCCTGTaGCTTGCCCTCCTCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GAGCSAHQVSGALGRGERIVSIL*LALLWP Trigger: AGGCCAGAGGAGGGCAAGTCACAGGATGGAAACAAT...CCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | CCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCAGCTTCTGCACTACGATCTaGTCCTTCTTGAGAGTGATC | + |
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Preference number: 4 (lower is better) Translates to: PQLALGPAQNEEWVSPASFCTTI*SFLRVI Trigger: GATCACTCTCAAGAAGGACCAGATCGTAGTGCAGAA...GCTGGCGGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR GCA 90 bp | TTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCTGCTGGAAGCCAGGCTaGTTGTTTTTGTCATCAGGA | + |
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Preference number: 4 (lower is better) Translates to: FPPQLALGPAQNEEWVSPCWKPG*LFLSSG Trigger: TCCTGATGACAAAAACAAGCAGCCTGGCTTCCAGCA...GGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAGAGAGCTTAGGAGGTTCTaGGGGTGGTTCCTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSAPGIRSPRQGREVGTRELRRF*GWFLLF Trigger: GAAGAGGAGGAACCACCCCCAGAACCTCCTAAGCTC...TCTGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAGACGGGGTCATTGCGATTaGCAGCAGAGACAGCGTACT | + |
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Preference number: 4 (lower is better) Translates to: LSAPGIRSPRQGREVGTRRGHCD*QQRQRT Trigger: AGTACGCTGTCTCTGCTGCCAATCGCAATGACCCCG...TCTGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | CGGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGCTCCTCCTCCATCATaGCTGCCAGAGGATTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: RCRLLSAPGIRSPRQGREAPPPS*LPEDFS Trigger: AGAAAAATCCTCTGGCAGCCATGATGGAGGAGGAGC...CTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAGATCCCCACAAACGATCTaGTCACGCGGTGCACACGTT | + |
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Preference number: 4 (lower is better) Translates to: LSAPGIRSPRQGREVGTRSPQTI*SRGAHV Trigger: AACGTGTGCACCGCGTGACCAGATCGTTTGTGGGGA...TCTGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR GCA 90 bp | GGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGCCCTTCTTGAATAACTaGTTCAGTCGCTGTAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GAGCSAHQVSGALGRGERPFLNN*FSRCSP Trigger: TGGGCTACAGCGACTGAAGCAGTTATTCAAGAAGGG...CCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR GCA 90 bp | TTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCTGGTTTTGCAGTTCTTaGAGCGGAGTCCAAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: FPPQLALGPAQNEEWVSPWFCSS*SGVQTC Trigger: ACAAGTTTGGACTCCGCTGCAAGAACTGCAAAACCA...GGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR GCA 90 bp | TGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAAACCAGGTGGGATCTTaGCGAAGCATCTCTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: CSAHQVSGALGRGERWEPNQVGS*RSISAS Trigger: AGATGCAGAGATGCTTCGGCAAGATCCCACCTGGTT...TGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR GCA 90 bp | CGGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGTTTTTCTTATCTGCCTaGCCCTTCTTCCGTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: RCRLLSAPGIRSPRQGREFFLSA*PFFRSL Trigger: CAAGGAACGGAAGAAGGGGCAGGCAGATAAGAAAAA...CTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR GCA 90 bp | CCCCACCCCCAAGCTCTTGAAAGTTGGATGAACCTGAAGTGTGGGCCTAATCGGGATCTGGTCACGCGGTaGACACGTTCTCCAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: PHPQALESWMNLKCGPNRDLVTR*TRSPAR Trigger: GCGGGCTGGAGAACGTGTGCACCGCGTGACCAGATC...CCGATTAGGCCCACACTTCAGGTTCATCCAACTTTCAAGAGCTTGGGGGTGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCCCGAATGATGAAGTTTaGAGGGAAGAATCCGACTTT | + |
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Preference number: 4 (lower is better) Translates to: FPPQLALGPAQNEEWVSPPNDEV*REESDF Trigger: AAAGTCGGATTCTTCCCTCCAAACTTCATCATTCGG...GGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | GGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGAATGCTCATGGATGTTaGTTTTGCAGTTCTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GAGCSAHQVSGALGRGERNAHGC*FCSSCS Trigger: GCTGCAAGAACTGCAAAACCAACATCCATGAGCATT...CCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CCA 90 bp | GGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGCCGAATGATGAAGTTTaGAGGGAAGAATCCGACTTT | + |
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Preference number: 4 (lower is better) Translates to: GAGCSAHQVSGALGRGERPNDEV*REESDF Trigger: AAAGTCGGATTCTTCCCTCCAAACTTCATCATTCGG...CCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR GCA 90 bp | CTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAGATGGTTTTGCAGTTCTTaGAGCGGAGTCCAAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSAPGIRSPRQGREVGTRWFCSS*SGVQTC Trigger: ACAAGTTTGGACTCCGCTGCAAGAACTGCAAAACCA...TCTGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACCCCCAAGCTCTTGAAAGTTGGATGAACCTGAAGTGTGGGCCTAATCGGAGGAGGTTCTGGGGGTaGTTCCTCCTCTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHPQALESWMNLKCGPNRRRFWG*FLLFLL Trigger: GAGGAGGAAGAGGAGGAACCACCCCCAGAACCTCCT...CCGATTAGGCCCACACTTCAGGTTCATCCAACTTTCAAGAGCTTGGGGGTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAGATTCTGCACTACGATCTaGTCCTTCTTGAGAGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LSAPGIRSPRQGREVGTRFCTTI*SFLRVI Trigger: GATCACTCTCAAGAAGGACCAGATCGTAGTGCAGAA...TCTGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAAATGCTCATGGATGTTaGTTTTGCAGTTCTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSAHQVSGALGRGERWEPNAHGC*FCSSCS Trigger: GCTGCAAGAACTGCAAAACCAACATCCATGAGCATT...TGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR TCA 90 bp | CCCCACCCCCAAGCTCTTGAAAGTTGGATGAACCTGAAGTGTGGGCCTAATCGGCCTTCTCCAGGGCTTTaGACCGATAGAGAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PHPQALESWMNLKCGPNRPSPGL*TDREPQ Trigger: TTGTGGCTCTCTATCGGTTCAAAGCCCTGGAGAAGG...CCGATTAGGCCCACACTTCAGGTTCATCCAACTTTCAAGAGCTTGGGGGTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACCCCCAAGCTCTTGAAAGTTGGATGAACCTGAAGTGTGGGCCTAATCGGGCTCCTCCTCCATCATaGCTGCCAGAGGATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PHPQALESWMNLKCGPNRAPPPS*LPEDFS Trigger: AGAAAAATCCTCTGGCAGCCATGATGGAGGAGGAGC...CCGATTAGGCCCACACTTCAGGTTCATCCAACTTTCAAGAGCTTGGGGGTGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CCA 90 bp | TTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCCGCCTCTCCATTGGCTTaGGGCTCTGGGGGAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LINSKHLTVLPLLMEMLPASPLA*GSGGGS Trigger: GGAGCCTCCCCCAGAGCCCCAAGCCAATGGAGAGGC...GGGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CCA 90 bp | TTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCCATTGGCTTGGGGCTCTaGGGGAGGCTCCATCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LINSKHLTVLPLLMEMLPIGLGL*GRLHLS Trigger: GCTGAGATGGAGCCTCCCCCAGAGCCCCAAGCCAAT...GGGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR GCA 90 bp | TTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCCTTCCATCCTGTGACTTaGCCTCCTCTGGCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LINSKHLTVLPLLMEMLPFHPVT*PPLAWL Trigger: CAGCCAGGCCAGAGGAGGGCAAGTCACAGGATGGAA...GGGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CCA 90 bp | TTTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCTCCCCACAAACGATCTaGTCACGCGGTGCACACGTT | + |
|
Preference number: 4 (lower is better) Translates to: FNKFETFDSSAPPYGDAPSPQTI*SRGAHV Trigger: AACGTGTGCACCGCGTGACCAGATCGTTTGTGGGGA...GGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR TCA 90 bp | TTTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCGGCTTCTTGAAGAAGTaGTCTTTGAACTTGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FNKFETFDSSAPPYGDAPGFLKK*SLNLWG Trigger: GCCCCACAAGTTCAAAGATCACTTCTTCAAGAAGCC...GGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR GCA 90 bp | TTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCCTTTTTCTTATCTGCCTaGCCCTTCTTCCGTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LINSKHLTVLPLLMEMLPFFLSA*PFFRSL Trigger: CAAGGAACGGAAGAAGGGGCAGGCAGATAAGAAAAA...GGGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR GCA 90 bp | TTTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCCTCCTCCATCATGGCTaGCAGAGGATTTTTCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: FNKFETFDSSAPPYGDAPLLHHG*QRIFLI Trigger: GATAAGAAAAATCCTCTGGCAGCCATGATGGAGGAG...GGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCAGCCCCACCGCCTCTCCATaGGCTTGGGGCTCTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PQLALGPAQNEEWVSPASPTASP*AWGSGG Trigger: TCCCCCAGAGCCCCAAGCCAATGGAGAGGCGGTGGG...GCTGGCGGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCCGCCTCTCCATTGGCTaGGGGCTCTGGGGGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPPQLALGPAQNEEWVSPRLSIG*GLWGRL Trigger: GAGCCTCCCCCAGAGCCCCAAGCCAATGGAGAGGCG...GGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCAGCTTTCCATCCTGTGACTaGCCCTCCTCTGGCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQLALGPAQNEEWVSPASFPSCD*PSSGLA Trigger: AGCCAGGCCAGAGGAGGGCAAGTCACAGGATGGAAA...GCTGGCGGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAGACCCACCGCCTCTCCATaGGCTTGGGGCTCTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSAPGIRSPRQGREVGTRPTASP*AWGSGG Trigger: TCCCCCAGAGCCCCAAGCCAATGGAGAGGCGGTGGG...TCTGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCAGCTTGTGGGGCTTGTCGTaGACGAGCTTAGGAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQLALGPAQNEEWVSPASLWGLS*TSLGGS Trigger: AGAACCTCCTAAGCTCGTCAACGACAAGCCCCACAA...GCTGGCGGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCAGAGACAGCGTACTGTaGGTCGCTGTAGAGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FPPQLALGPAQNEEWVSPRDSVL*VAVEWG Trigger: TCCCCACTCTACAGCGACCAACAGTACGCTGTCTCT...GGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | CGGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGTTTCCATCCTGTGACTaGCCCTCCTCTGGCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCRLLSAPGIRSPRQGREFPSCD*PSSGLA Trigger: AGCCAGGCCAGAGGAGGGCAAGTCACAGGATGGAAA...CTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCGCCAGCTCATGGATGTTGGTTTaGCAGTTCTTGCAGCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PQLALGPAQNEEWVSPASSWMLV*QFLQRS Trigger: ACTCCGCTGCAAGAACTGCAAAACCAACATCCATGA...GCTGGCGGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | GGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGCCCTTCTTCCGTTCCTaGTTTGCCATGATCACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GAGCSAHQVSGALGRGERPFFRS*FAMITP Trigger: CGGGGTGATCATGGCAAACAAGGAACGGAAGAAGGG...CCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | GGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGAAACCAGGTGGGATCTaGCCGAAGCATCTCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: GAGCSAHQVSGALGRGERKPGGI*PKHLCI Trigger: GATGCAGAGATGCTTCGGCAAGATCCCACCTGGTTT...CCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | CGGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGCGCCACCACTCCTCATaGGAGTCATCAATGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCRLLSAPGIRSPRQGRERHHSS*ESSMTV Trigger: CACAGTCATTGATGACTCCAATGAGGAGTGGTGGCG...CTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | CGGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGTTGAACTTGTGGGGCTaGTCGTTGACGAGCTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RCRLLSAPGIRSPRQGRELNLWG*SLTSLG Trigger: TCCTAAGCTCGTCAACGACAAGCCCCACAAGTTCAA...CTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CAA 90 bp | CTTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCACGATCTGGTCCTTCTaGAGAGTGATCTGTCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LPSPARTGPRPERGVGVSTIWSF*RVICPI Trigger: GATTGGACAGATCACTCTCAAGAAGGACCAGATCGT...GGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCAATGCTCATGGATGTaGGTTTTGCAGTTCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPSPARTGPRPERGVGVSQCSWM*VLQFLQ Trigger: CTGCAAGAACTGCAAAACCAACATCCATGAGCATTG...GGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CAA 90 bp | TGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAAAACCAGGTGGGATCTaGCCGAAGCATCTCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: CSAHQVSGALGRGERWEPKPGGI*PKHLCI Trigger: GATGCAGAGATGCTTCGGCAAGATCCCACCTGGTTT...TGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAGACGCCACCACTCCTCATaGGAGTCATCAATGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSAPGIRSPRQGREVGTRRHHSS*ESSMTV Trigger: CACAGTCATTGATGACTCCAATGAGGAGTGGTGGCG...TCTGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCCCCAGCTCGCACTGGGCCCCGCCCAGAACGAGGAGTGGGTGTCTCCCTTGTCCTTTTCTGCATaGTTTCCATCCTGTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FPPQLALGPAQNEEWVSPLSFSA*FPSCDL Trigger: CAAGTCACAGGATGGAAACAATGCAGAAAAGGACAA...GGGAGACACCCACTCCTCGTTCTGGGCGGGGCCCAGTGCGAGCTGGGGAGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS GCA 90 bp | ATCTGTCCAATCTCGCGGTTCCCCACAAACGATCTGGTCACGCGGTaGACACGTTCTCCAGCCCGCACCCGAATGATGAAGTTTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ICPISRFPTNDLVTR*TRSPARTRMMKFGG Trigger: CCCTCCAAACTTCATCATTCGGGTGCGGGCTGGAGAACGTGTGCACCGCGTGACCAGATCGTTTGTGGGGAACCGCGAGATTGGACAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS CCA 90 bp | CACGCGGTGCACACGTTCTCCAGCCCGCACCCGAATGATGAAGTTTaGAGGGAAGAATCCGACTTTCTCTCCGATTTTCCCCCGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: HAVHTFSSPHPNDEV*REESDFLSDFPPPP Trigger: TGGTGGCGGGGGAAAATCGGAGAGAAAGTCGGATTCTTCCCTCCAAACTTCATCATTCGGGTGCGGGCTGGAGAACGTGTGCACCGCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGGTGGGAACCAGATCATGGATGTTGGTTTaGCAGTTCTTGCAGCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSAPGIRSPRQGREVGTRSWMLV*QFLQRS Trigger: ACTCCGCTGCAAGAACTGCAAAACCAACATCCATGA...TCTGGTTCCCACCTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | CGGTGCAGGCTGCTCAGCGCACCAGGTATCCGGAGCCCTAGGCAGGGGAGAGAGTTGTCCTTTTCTGCATaGTTTCCATCCTGTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RCRLLSAPGIRSPRQGRELSFSA*FPSCDL Trigger: CAAGTCACAGGATGGAAACAATGCAGAAAAGGACAA...CTCTCTCCCCTGCCTAGGGCTCCGGATACCTGGTGCGCTGAGCAGCCTGCACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS TCA 90 bp | GCTCTGGGGGAGGCTCCATCTCAGCTGTCTCTGGAGAGCCCTTCTTaGATAACTGCTTCAGTCGCTGTAGCCCACTTTGCGGAGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALGEAPSQLSLESPS*ITASVAVAHFAESL Trigger: GAGAGACTCCGCAAAGTGGGCTACAGCGACTGAAGCAGTTATTCAAGAAGGGCTCTCCAGAGACAGCTGAGATGGAGCCTCCCCCAGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS TCA 90 bp | GGAAGTCGGTGGGAAACAGCCCCACCTTGCGGCCGGTGTAGACCTTaGCGTAACCACCAGCTTCATCTCCTTTCTGCACTACGATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSRWETAPPCGRCRP*RNHQLHLLSALRSG Trigger: ACCAGATCGTAGTGCAGAAAGGAGATGAAGCTGGTGGTTACGTCAAGGTCTACACCGGCCGCAAGGTGGGGCTGTTTCCCACCGACTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS CCA 90 bp | ATTGCGATTGGCAGCAGAGACAGCGTACTGTTGGTCGCTGTAGAGTaGGGAGCTATAGGCCCGACGGAAACCAGGTGGGATCTTGCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: IAIGSRDSVLLVAVE*GAIGPTETRWDLAE Trigger: TTCGGCAAGATCCCACCTGGTTTCCGTCGGGCCTATAGCTCCCCACTCTACAGCGACCAACAGTACGCTGTCTCTGCTGCCAATCGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS TCA 90 bp | TCTTCTCCCCTGGCGGGAAATCCAGGTCGTCCTTCTCCAGGGCTTTaGACCGATAGAGAGCCACAAAGTAATGAGACTGCTGGAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSPLAGNPGRPSPGL*TDREPQSNETAGSQ Trigger: CTGGCTTCCAGCAGTCTCATTACTTTGTGGCTCTCTATCGGTTCAAAGCCCTGGAGAAGGACGACCTGGATTTCCCGCCAGGGGAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | CCCCACCCCCAAGCTCTTGAAAGTTGGATGAACCTGAAGTGTGGGCCTAATCGGTTGAACTTGTGGGGCTaGTCGTTGACGAGCTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PHPQALESWMNLKCGPNRLNLWG*SLTSLG Trigger: TCCTAAGCTCGTCAACGACAAGCCCCACAAGTTCAA...CCGATTAGGCCCACACTTCAGGTTCATCCAACTTTCAAGAGCTTGGGGGTGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS CCA 90 bp | GAACTTGTGGGGCTTGTCGTTGACGAGCTTAGGAGGTTCTGGGGGTaGTTCCTCCTCTTCCTCCTCCTCCTCTTCTTCCTCATAGATATA | + |
|
Preference number: 5 (lower is better) Translates to: ELVGLVVDELRRFWG*FLLFLLLLFFLIDI Trigger: TATATCTATGAGGAAGAAGAGGAGGAGGAGGAAGAGGAGGAACCACCCCCAGAACCTCCTAAGCTCGTCAACGACAAGCCCCACAAGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS CCA 90 bp | ATCTTTGAACTTGTGGGGCTTGTCGTTGACGAGCTTAGGAGGTTCTaGGGGTGGTTCCTCCTCTTCCTCCTCCTCCTCTTCTTCCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: IFELVGLVVDELRRF*GWFLLFLLLLFFLI Trigger: TATGAGGAAGAAGAGGAGGAGGAGGAAGAGGAGGAACCACCCCCAGAACCTCCTAAGCTCGTCAACGACAAGCCCCACAAGTTCAAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | TTTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCCGCCTCTCCATTGGCTaGGGGCTCTGGGGGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FNKFETFDSSAPPYGDAPRLSIG*GLWGRL Trigger: GAGCCTCCCCCAGAGCCCCAAGCCAATGGAGAGGCG...GGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | TTTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCAGAGACAGCGTACTGTaGGTCGCTGTAGAGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FNKFETFDSSAPPYGDAPRDSVL*VAVEWG Trigger: TCCCCACTCTACAGCGACCAACAGTACGCTGTCTCT...GGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
||
| CDS-3UTR CAA 90 bp | TTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCCTCAAACACGGGGTCATaGCGATTGGCAGCAGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LINSKHLTVLPLLMEMLPSNTGS*RLAAET Trigger: TGTCTCTGCTGCCAATCGCAATGACCCCGTGTTTGA...GGGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CAA 90 bp | TTTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCCCCTTCTTCCGTTCCTaGTTTGCCATGATCACCCCG | + |
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Preference number: 5 (lower is better) Translates to: FNKFETFDSSAPPYGDAPPFFRS*FAMITP Trigger: CGGGGTGATCATGGCAAACAAGGAACGGAAGAAGGG...GGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CAA 90 bp | TTTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCTCAAACACGGGGTCATaGCGATTGGCAGCAGAGACA | + |
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Preference number: 5 (lower is better) Translates to: FNKFETFDSSAPPYGDAPSNTGS*RLAAET Trigger: TGTCTCTGCTGCCAATCGCAATGACCCCGTGTTTGA...GGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CAA 90 bp | TTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCCTTGGTTTTGCAGTTCTaGCAGCGGAGTCCAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: LINSKHLTVLPLLMEMLPLVLQF*QRSPNL Trigger: CAAGTTTGGACTCCGCTGCAAGAACTGCAAAACCAA...GGGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CAA 90 bp | TTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCCCAGCGGAGTCCAAACTaGTTATTGAGCACAATCATC | + |
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Preference number: 5 (lower is better) Translates to: LINSKHLTVLPLLMEMLPQRSPN*LLSTII Trigger: GATGATTGTGCTCAATAACAAGTTTGGACTCCGCTG...GGGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CAA 90 bp | TTTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCTTGGTTTTGCAGTTCTaGCAGCGGAGTCCAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: FNKFETFDSSAPPYGDAPLVLQF*QRSPNL Trigger: CAAGTTTGGACTCCGCTGCAAGAACTGCAAAACCAA...GGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CAA 90 bp | TTTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCCAGCGGAGTCCAAACTaGTTATTGAGCACAATCATC | + |
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Preference number: 5 (lower is better) Translates to: FNKFETFDSSAPPYGDAPQRSPN*LLSTII Trigger: GATGATTGTGCTCAATAACAAGTTTGGACTCCGCTG...GGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS-3UTR CAA 90 bp | TTTAATAAATTCGAAACATTTGACAGTTCTGCCCCTCCTTATGGAGATGCTCCCCAATGCTCATGGATGTaGGTTTTGCAGTTCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: FNKFETFDSSAPPYGDAPQCSWM*VLQFLQ Trigger: CTGCAAGAACTGCAAAACCAACATCCATGAGCATTG...GGGAGCATCTCCATAAGGAGGGGCAGAACTGTCAAATGTTTCGAATTTATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS GCA 72 bp | TCACCCCGACGCGCAGGGTTTCAAACACGGGGTCATTaGGATTGGCAGCAGAGACAGCGTACTGTTGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: SPRRAGFQTRGH*DWQQRQRTVGR Trigger: GCGACCAACAGTACGCTGTCTCTGCTGCCAATCGCAATGACCCCGTGTTTGAAACCCTGCGCGTCGGGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS GCA 72 bp | ATCTCGCGGTTCCCCACAAACGATCTGGTCACGCGGTaGACACGTTCTCCAGCCCGCACCCGAATGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: ISRFPTNDLVTR*TRSPARTRMMK Trigger: CTTCATCATTCGGGTGCGGGCTGGAGAACGTGTGCACCGCGTGACCAGATCGTTTGTGGGGAACCGCGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS CCA 72 bp | GGCAGCAGAGACAGCGTACTGTTGGTCGCTGTAGAGTaGGGAGCTATAGGCCCGACGGAAACCAGGTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: GSRDSVLLVAVE*GAIGPTETRWD Trigger: ATCCCACCTGGTTTCCGTCGGGCCTATAGCTCCCCACTCTACAGCGACCAACAGTACGCTGTCTCTGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS CAA 72 bp | GGGGTCATTGCGATTGGCAGCAGAGACAGCGTACTGTaGGTCGCTGTAGAGTGGGGAGCTATAGGCCCGACG | + |
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Preference number: 6 (lower is better) Translates to: GVIAIGSRDSVL*VAVEWGAIGPT Trigger: CGTCGGGCCTATAGCTCCCCACTCTACAGCGACCAACAGTACGCTGTCTCTGCTGCCAATCGCAATGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS CCA 72 bp | CTTGTGGGGCTTGTCGTTGACGAGCTTAGGAGGTTCTaGGGGTGGTTCCTCCTCTTCCTCCTCCTCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LVGLVVDELRRF*GWFLLFLLLLF Trigger: GAAGAGGAGGAGGAGGAAGAGGAGGAACCACCCCCAGAACCTCCTAAGCTCGTCAACGACAAGCCCCACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS CCA 72 bp | CCTCTGGCCTGGCTGACTCTGGCTCCTCCTCCATCATaGCTGCCAGAGGATTTTTCTTATCTGCCTGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PLAWLTLAPPPS*LPEDFSYLPAP Trigger: AGGGGCAGGCAGATAAGAAAAATCCTCTGGCAGCCATGATGGAGGAGGAGCCAGAGTCAGCCAGGCCAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS CAA 72 bp | ATCACCCCGACGCGCAGGGTTTCAAACACGGGGTCATaGCGATTGGCAGCAGAGACAGCGTACTGTTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: ITPTRRVSNTGS*RLAAETAYCWS Trigger: CGACCAACAGTACGCTGTCTCTGCTGCCAATCGCAATGACCCCGTGTTTGAAACCCTGCGCGTCGGGGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS CAA 90 bp | GGCTCTGGGGGAGGCTCCATCTCAGCTGTCTCTGGAGAGCCCTTCTaGAATAACTGCTTCAGTCGCTGTAGCCCACTTTGCGGAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GSGGGSISAVSGEPF*NNCFSRCSPLCGVS Trigger: AGAGACTCCGCAAAGTGGGCTACAGCGACTGAAGCAGTTATTCAAGAAGGGCTCTCCAGAGACAGCTGAGATGGAGCCTCCCCCAGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS CCA 72 bp | CGACGCGCAGGGTTTCAAACACGGGGTCATTGCGATTaGCAGCAGAGACAGCGTACTGTTGGTCGCTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RRAGFQTRGHCD*QQRQRTVGRCR Trigger: TCTACAGCGACCAACAGTACGCTGTCTCTGCTGCCAATCGCAATGACCCCGTGTTTGAAACCCTGCGCGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS TCA 72 bp | TGGGAAACAGCCCCACCTTGCGGCCGGTGTAGACCTTaGCGTAACCACCAGCTTCATCTCCTTTCTGCACTA | + |
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Preference number: 6 (lower is better) Translates to: WETAPPCGRCRP*RNHQLHLLSAL Trigger: TAGTGCAGAAAGGAGATGAAGCTGGTGGTTACGTCAAGGTCTACACCGGCCGCAAGGTGGGGCTGTTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS CAA 72 bp | GGAGGCTCCATCTCAGCTGTCTCTGGAGAGCCCTTCTaGAATAACTGCTTCAGTCGCTGTAGCCCACTTTGC | + |
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Preference number: 6 (lower is better) Translates to: GGSISAVSGEPF*NNCFSRCSPLC Trigger: GCAAAGTGGGCTACAGCGACTGAAGCAGTTATTCAAGAAGGGCTCTCCAGAGACAGCTGAGATGGAGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS TCA 72 bp | CTGGCGGGAAATCCAGGTCGTCCTTCTCCAGGGCTTTaGACCGATAGAGAGCCACAAAGTAATGAGACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LAGNPGRPSPGL*TDREPQSNETA Trigger: AGCAGTCTCATTACTTTGTGGCTCTCTATCGGTTCAAAGCCCTGGAGAAGGACGACCTGGATTTCCCGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS CCA 72 bp | CACACGTTCTCCAGCCCGCACCCGAATGATGAAGTTTaGAGGGAAGAATCCGACTTTCTCTCCGATTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: HTFSSPHPNDEV*REESDFLSDFP Trigger: GGGAAAATCGGAGAGAAAGTCGGATTCTTCCCTCCAAACTTCATCATTCGGGTGCGGGCTGGAGAACGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS GCA 72 bp | ATCTCAGCTGTCTCTGGAGAGCCCTTCTTGAATAACTaGTTCAGTCGCTGTAGCCCACTTTGCGGAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ISAVSGEPFLNN*FSRCSPLCGVS Trigger: AGAGACTCCGCAAAGTGGGCTACAGCGACTGAAGCAGTTATTCAAGAAGGGCTCTCCAGAGACAGCTGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS CAA 90 bp | TTGTCATCAGGAGTTTTCTTCTCGGCCTTCTTGTCCTTTTCTGCATaGTTTCCATCCTGTGACTTGCCCTCCTCTGGCCTGGCTGACTCT | + |
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Preference number: 6 (lower is better) Translates to: LSSGVFFSAFLSFSA*FPSCDLPSSGLADS Trigger: AGAGTCAGCCAGGCCAGAGGAGGGCAAGTCACAGGATGGAAACAATGCAGAAAAGGACAAGAAGGCCGAGAAGAAAACTCCTGATGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS CCA 72 bp | GCATCTCCACGTAGGACTGACAATGCTCATGGATGTTaGTTTTGCAGTTCTTGCAGCGGAGTCCAAACTTGT | + |
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Preference number: 6 (lower is better) Translates to: ASPRRTDNAHGC*FCSSCSGVQTC Trigger: ACAAGTTTGGACTCCGCTGCAAGAACTGCAAAACCAACATCCATGAGCATTGTCAGTCCTACGTGGAGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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| CDS CAA 72 bp | ATGTTGGTTTTGCAGTTCTTGCAGCGGAGTCCAAACTaGTTATTGAGCACAATCATCCGGGCACAGACATCG | + |
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Preference number: 6 (lower is better) Translates to: MLVLQFLQRSPN*LLSTIIRAQTS Trigger: CGATGTCTGTGCCCGGATGATTGTGCTCAATAACAAGTTTGGACTCCGCTGCAAGAACTGCAAAACCAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035839.3 ENSMUST00000160019.8 |
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