Pregenerated sensors for STAC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017400Ensembl transcript IDs: ENSMUST00000017544.9, ENSMUST00000131519.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAGGGCTAAGGGACACCAACAGGTCCTCTCTCAAGGCCCCACTTaGAGAGGGTGGATACACAGACCCAAGCAAAGGCTGTGGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: GRAKGHQQVLSQGPT*RGWIHRPKQRLWAE Trigger: CTCTGCCCACAGCCTTTGCTTGGGTCTGTGTATCCACCCTCTGCAAGTGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTTAGCCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR TCA 90 bp | AAGCAAAGGCTGTGGGCAGAGAGGAGTCAGGCATGCAAGGCAGTATaGGCGGGTAGTCTCTGGAAGACAGCAGACGACTCCCTAGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: KQRLWAERSQACKAV*AGSLWKTADDSLGW Trigger: CCACCCTAGGGAGTCGTCTGCTGTCTTCCAGAGACTACCCGCTCATACTGCCTTGCATGCCTGACTCCTCTCTGCCCACAGCCTTTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR CCA 90 bp | AAGGGACACCAACAGGTCCTCTCTCAAGGCCCCACTTGCAGAGGGTaGATACACAGACCCAAGCAAAGGCTGTGGGCAGAGAGGAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: KGHQQVLSQGPTCRG*IHRPKQRLWAERSQ Trigger: CTGACTCCTCTCTGCCCACAGCCTTTGCTTGGGTCTGTGTATCCACCCTCTGCAAGTGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR TCA 90 bp | AGGAACAGACTCCTACGTGTTACAATCCCTTGCAGACCTCAGTCCTaGCCCTGCTCTGTCGCCCAGGTTTCAAGTAATTGGAAAGATTCC | + |
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Preference number: 1 (lower is better) Translates to: RNRLLRVTIPCRPQS*PCSVAQVSSNWKDS Trigger: GGAATCTTTCCAATTACTTGAAACCTGGGCGACAGAGCAGGGTCAGGACTGAGGTCTGCAAGGGATTGTAACACGTAGGAGTCTGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR TCA 90 bp | GCTTCTGGTGGTAGGGATTTCTGGAGTCCTAACAGTGAAATGTTTTaGCCAAGCAAGGGCCAGCGTCTTGTTCTCCACCTGGGTCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: ASGGRDFWSPNSEMF*PSKGQRLVLHLGLC Trigger: ACAAAGACCCAGGTGGAGAACAAGACGCTGGCCCTTGCTTGGTCAAAACATTTCACTGTTAGGACTCCAGAAATCCCTACCACCAGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR-3UTR CCA 90 bp | CCTAGGGTGGGCCTCACTATGGCAACCCGACTAGGTGGTGCTTGGGCTCCGGGTGGGAGAGGAAGGGTGTaGCCAGGATGCCCGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PRVGLTMATRLGGAWAPGGRGRV*PGCPLP Trigger: AGGAAGCGGGCATCCTGGCCACACCCTTCCTCTCCC...ACCCGGAGCCCAAGCACCACCTAGTCGGGTTGCCATAGTGAGGCCCACCCTAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGCCTGGGGGCTCAGCAACGCCCCCGCAGACCCGTCATGCAGCCTCATGTACAATGAGACTGTTCTGTaGGGACTGCCTTCAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: WAWGLSNAPADPSCSLMYNETVL*GLPSRN Trigger: GTTCCTTGAAGGCAGTCCTCACAGAACAGTCTCATT...GTACATGAGGCTGCATGACGGGTCTGCGGGGGCGTTGCTGAGCCCCCAGGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGAAGGAGGGGCAGGTGCTGGCACCAGGAAAAAGAAGAAGCAGCCTCTTGAGTGCAGACCTCAGTCCTaGCCCTGCTCTGTCGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LEGGAGAGTRKKKKQPLECRPQS*PCSVAQ Trigger: CTGGGCGACAGAGCAGGGTCAGGACTGAGGTCTGCA...CTCAAGAGGCTGCTTCTTCTTTTTCCTGGTGCCAGCACCTGCCCCTCCTTCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR-3UTR CCA 90 bp | TCAATCTGCCAAGGTATCCTTCCCAGGGATGGGCCCTATAGAGCCCAAACGGTAGGCAACCCGACTAGGTaGTGCTTGGGCTCCGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SICQGILPRDGPYRAQTVGNPTR*CLGSGW Trigger: CCACCCGGAGCCCAAGCACCACCTAGTCGGGTTGCC...TACCGTTTGGGCTCTATAGGGCCCATCCCTGGGAAGGATACCTTGGCAGATTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR CAA 90 bp | AAGGAGGGGCAGGTGCTGGCACCAGGAAAAAGAAGAAGCAGCCTCTaGAGGAAGAGGTCCTTTGTCCTGCCAGGAGGGCTAAGGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: KEGQVLAPGKRRSSL*RKRSFVLPGGLRAP Trigger: AGGAGCCCTTAGCCCTCCTGGCAGGACAAAGGACCTCTTCCTCAAGAGGCTGCTTCTTCTTTTTCCTGGTGCCAGCACCTGCCCCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR-3UTR GCA 90 bp | AGACCCGTCATGCAGCCTCATGTACAGTGGGCATTGGGCCCGCCCCGGGGATTTGGTCTTTGTCCAGGCTaGTCTTGGCTACCGATTTCT | + |
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Preference number: 2 (lower is better) Translates to: RPVMQPHVQWALGPPRGFGLCPG*SWLPIS Trigger: AGAAATCGGTAGCCAAGAGCAGCCTGGACAAAGACC...AAATCCCCGGGGCGGGCCCAATGCCCACTGTACATGAGGCTGCATGACGGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGAAGGAGGGGCAGGTGCTGGCACCAGGAAAAAGAAGAAGCAGCCTCTTGAGCTAAGTGGGGGCGGGTaGTGCTTAGGAGAGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: LEGGAGAGTRKKKKQPLELSGGG*CLGERL Trigger: CAGTCTCTCTCCTAAGCATCACCCGCCCCCACTTAG...CTCAAGAGGCTGCTTCTTCTTTTTCCTGGTGCCAGCACCTGCCCCTCCTTCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR CAA 90 bp | GTGAGGACTGCCTTCAAGGAACAGACTCCTACGTGTTACAATCCCTaGCAGACCTCAGTCCTGACCCTGCTCTGTCGCCCAGGTTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: VRTAFKEQTPTCYNP*QTSVLTLLCRPGFK Trigger: CTTGAAACCTGGGCGACAGAGCAGGGTCAGGACTGAGGTCTGCAAGGGATTGTAACACGTAGGAGTCTGTTCCTTGAAGGCAGTCCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR CAA 90 bp | GGAGTCCTAACAGTGAAATGTTTTGACCAAGCAAGGGCCAGCGTCTaGTTCTCCACCTGGGTCTTTGTCCAGGCTGCTCTTGGCTACCGA | + |
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Preference number: 2 (lower is better) Translates to: GVLTVKCFDQARASV*FSTWVFVQAALGYR Trigger: TCGGTAGCCAAGAGCAGCCTGGACAAAGACCCAGGTGGAGAACAAGACGCTGGCCCTTGCTTGGTCAAAACATTTCACTGTTAGGACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR-3UTR TCA 90 bp | TCAATCTGCCAAGGTATCCTTCCCAGGGATGGGCCCTATAGAGCCCAAACGGTAGTTTCTTCCCACTTTTaGCTCCCTTTCCCAAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SICQGILPRDGPYRAQTVVSSHF*LPFPSP Trigger: GGGGCTTGGGAAAGGGAGTCAAAAGTGGGAAGAAAC...TACCGTTTGGGCTCTATAGGGCCCATCCCTGGGAAGGATACCTTGGCAGATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR-3UTR CAA 90 bp | AGACCCGTCATGCAGCCTCATGTACAGTGGGCATTGGGCCCGCCCCGGGGATTTTCTCCACCTGGGTCTTaGTCCAGGCTGCTCTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: RPVMQPHVQWALGPPRGFSPPGS*SRLLLA Trigger: AGCCAAGAGCAGCCTGGACAAAGACCCAGGTGGAGA...AAATCCCCGGGGCGGGCCCAATGCCCACTGTACATGAGGCTGCATGACGGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR CCA 72 bp | GTGGGCCTCACTATGGCAACCCGACTAGGTGGTGCTTaGGCTCCGGGTGGTCCTACCTGTAACTTCCTCGTT | + |
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Preference number: 3 (lower is better) Translates to: VGLTMATRLGGA*APGGPTCNFLV Trigger: AACGAGGAAGTTACAGGTAGGACCACCCGGAGCCCAAGCACCACCTAGTCGGGTTGCCATAGTGAGGCCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR TCA 72 bp | CTTCCTCAGTGCAGAAGGCTCCTAAGTGGGGGCGGGTaGTGCTTAGGAGAGAGACTGGGAGAGGAAGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: LPQCRRLLSGGG*CLGERLGEEGC Trigger: ACACCCTTCCTCTCCCAGTCTCTCTCCTAAGCATCACCCGCCCCCACTTAGGAGCCTTCTGCACTGAGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR TCA 72 bp | CTGTGGGCAGAGAGGAGTCAGGCATGCAAGGCAGTATaGGCGGGTAGTCTCTGGAAGACAGCAGACGACTCC | + |
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Preference number: 3 (lower is better) Translates to: LWAERSQACKAV*AGSLWKTADDS Trigger: GGAGTCGTCTGCTGTCTTCCAGAGACTACCCGCTCATACTGCCTTGCATGCCTGACTCCTCTCTGCCCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR CCA 72 bp | CAACAGGTCCTCTCTCAAGGCCCCACTTGCAGAGGGTaGATACACAGACCCAAGCAAAGGCTGTGGGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: QQVLSQGPTCRG*IHRPKQRLWAE Trigger: CTCTGCCCACAGCCTTTGCTTGGGTCTGTGTATCCACCCTCTGCAAGTGGGGCCTTGAGAGAGGACCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR TCA 72 bp | CATTGGCTGACAGGATCAGGGCTTAAAAGGAGGATCTaGGCTTGGAAGGAGGGGCAGGTGCTGGCACCAGGA | + |
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Preference number: 3 (lower is better) Translates to: HWLTGSGLKRRI*AWKEGQVLAPG Trigger: TCCTGGTGCCAGCACCTGCCCCTCCTTCCAAGCTCAGATCCTCCTTTTAAGCCCTGATCCTGTCAGCCAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR GCA 72 bp | AAGGGACACCAACAGGTCCTCTCTCAAGGCCCCACTTaGAGAGGGTGGATACACAGACCCAAGCAAAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: KGHQQVLSQGPT*RGWIHRPKQRL Trigger: CAGCCTTTGCTTGGGTCTGTGTATCCACCCTCTGCAAGTGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGAAGGAGGGGCAGGTGCTGGCACCAGGAAAAAGAAGAAGCAGCCTCTTGAGGGTAAGAAGGTAAGTTaGGTCCATCTGAGGACAGGG | + |
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Preference number: 3 (lower is better) Translates to: LEGGAGAGTRKKKKQPLEGKKVS*VHLRTG Trigger: CCCTGTCCTCAGATGGACCAAACTTACCTTCTTACC...CTCAAGAGGCTGCTTCTTCTTTTTCCTGGTGCCAGCACCTGCCCCTCCTTCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR CCA 72 bp | AGAAATAAACCTTCCTCAGTGCAGAAGGCTCCTAAGTaGGGGCGGGTGATGCTTAGGAGAGAGACTGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: RNKPSSVQKAPK*GRVMLRRETGR Trigger: TCTCCCAGTCTCTCTCCTAAGCATCACCCGCCCCCACTTAGGAGCCTTCTGCACTGAGGAAGGTTTATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR GCA 72 bp | CAGCGTCTTGTTCTCCACCTGGGTCTTTGTCCAGGCTaGTCTTGGCTACCGATTTCTAGTAGACAAAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: QRLVLHLGLCPG*SWLPISSRQRR Trigger: TCTCCTTTGTCTACTAGAAATCGGTAGCCAAGAGCAGCCTGGACAAAGACCCAGGTGGAGAACAAGACGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR-3UTR CAA 90 bp | AAAGAACTTTCCATAGCCTTCCTCAATCTGCCAAGGTATCCTTCCCAGGGATGGCGTTTCTTCCCACTTTaGACTCCCTTTCCCAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: KELSIAFLNLPRYPSQGWRFFPL*TPFPKP Trigger: GGGCTTGGGAAAGGGAGTCAAAAGTGGGAAGAAACG...CCATCCCTGGGAAGGATACCTTGGCAGATTGAGGAAGGCTATGGAAAGTTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR-3UTR CAA 90 bp | AAAGAACTTTCCATAGCCTTCCTCAATCTGCCAAGGTATCCTTCCCAGGGATGGACGTGTTACAATCCCTaGCAGACCTCAGTCCTGACC | + |
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Preference number: 3 (lower is better) Translates to: KELSIAFLNLPRYPSQGWTCYNP*QTSVLT Trigger: GGTCAGGACTGAGGTCTGCAAGGGATTGTAACACGT...CCATCCCTGGGAAGGATACCTTGGCAGATTGAGGAAGGCTATGGAAAGTTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| 3UTR TCA 72 bp | GGTAGGGATTTCTGGAGTCCTAACAGTGAAATGTTTTaGCCAAGCAAGGGCCAGCGTCTTGTTCTCCACCTG | + |
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Preference number: 3 (lower is better) Translates to: GRDFWSPNSEMF*PSKGQRLVLHL Trigger: CAGGTGGAGAACAAGACGCTGGCCCTTGCTTGGTCAAAACATTTCACTGTTAGGACTCCAGAAATCCCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR GCA 90 bp | TGGGCCTGGGGGCTCAGCAACGCCCCCGCAGACCCGTCATGCAGCCTCATGTACGCTGGTGGTGGCGCATaGACCAGGAGTGGGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: WAWGLSNAPADPSCSLMYAGGGA*TRSGEL Trigger: CAGCTCCCCACTCCTGGTGCATGCGCCACCACCAGC...GTACATGAGGCTGCATGACGGGTCTGCGGGGGCGTTGCTGAGCCCCCAGGCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CCA 90 bp | CCTAGGGTGGGCCTCACTATGGCAACCCGACTAGGTGGTGCTTGGGCTCCGGGTGGGAGGCAGTGGGGTTaGCGGTGTCAGCAGCACCTC | + |
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Preference number: 4 (lower is better) Translates to: PRVGLTMATRLGGAWAPGGRQWG*RCQQHL Trigger: GAGGTGCTGCTGACACCGCCAACCCCACTGCCTCCC...ACCCGGAGCCCAAGCACCACCTAGTCGGGTTGCCATAGTGAGGCCCACCCTAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CCA 90 bp | AGGGCTAAGGGACACCAACAGGTCCTCTCTCAAGGCCCCACTTGCAGAGGGTGGCAAGGGGCGAGGGACTaGGCACGGGGAGGGTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: RAKGHQQVLSQGPTCRGWQGARD*ARGGCW Trigger: CCAACACCCTCCCCGTGCCCAGTCCCTCGCCCCTTG...CCACCCTCTGCAAGTGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTTAGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CCA 90 bp | AGGGCTAAGGGACACCAACAGGTCCTCTCTCAAGGCCCCACTTGCAGAGGGTGGGGCACAGGCTGGTGGTaGCGCATGCACCAGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: RAKGHQQVLSQGPTCRGWGTGWW*RMHQEW Trigger: CCACTCCTGGTGCATGCGCCACCACCAGCCTGTGCC...CCACCCTCTGCAAGTGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTTAGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR TCA 90 bp | AAGGCTCCTAAGTGGGGGCGGGTGATGCTTAGGAGAGAGACTGGGAGAGGAAGGGCAGCCTCACTGGTTTaGGCGGTGCCAAGGGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: KAPKWGRVMLRRETGRGRAASLV*AVPRGE Trigger: CTCGCCCCTTGGCACCGCTCAAACCAGTGAGGCTGC...CCTTCCTCTCCCAGTCTCTCTCCTAAGCATCACCCGCCCCCACTTAGGAGCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CCA 90 bp | CCTAGGGTGGGCCTCACTATGGCAACCCGACTAGGTGGTGCTTGGGCTCCGGGTACTGTGCAGCCTCACTaGTTTGAGCGGTGCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PRVGLTMATRLGGAWAPGTVQPH*FERCQG Trigger: CCCTTGGCACCGCTCAAACCAGTGAGGCTGCACAGT...ACCCGGAGCCCAAGCACCACCTAGTCGGGTTGCCATAGTGAGGCCCACCCTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CCA 90 bp | AGGGCTAAGGGACACCAACAGGTCCTCTCTCAAGGCCCCACTTGCAGAGGGTGGCATGGCACAGGCTGGTaGTGGCGCATGCACCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RAKGHQQVLSQGPTCRGWHGTGW*WRMHQE Trigger: CTCCTGGTGCATGCGCCACCACCAGCCTGTGCCATG...CCACCCTCTGCAAGTGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTTAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR GCA 90 bp | AGACCCGTCATGCAGCCTCATGTACAGTGGGCATTGGGCCCGCCCCGGGGATTTGGAACGGTTCATCAGTaGCAGGGAGGTGCCATAGCG | + |
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Preference number: 4 (lower is better) Translates to: RPVMQPHVQWALGPPRGFGTVHQ*QGGAIA Trigger: CGCTATGGCACCTCCCTGGCACTGATGAACCGTTCC...AAATCCCCGGGGCGGGCCCAATGCCCACTGTACATGAGGCTGCATGACGGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR GCA 90 bp | CCTAGGGTGGGCCTCACTATGGCAACCCGACTAGGTGGTGCTTGGGCTCCGGGTCTGAGCTGCGGATGCTaGCTTCCCCGTCTTCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: PRVGLTMATRLGGAWAPGLSCGC*LPRLLL Trigger: TAACAGAAGACGGGGAAGGCAGCATCCGCAGCTCAG...ACCCGGAGCCCAAGCACCACCTAGTCGGGTTGCCATAGTGAGGCCCACCCTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CCA 90 bp | AAGGCTCCTAAGTGGGGGCGGGTGATGCTTAGGAGAGAGACTGGGAGAGGAAGGCCCGGGCATTGCTGGTaGGAGATCTCCTCGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: KAPKWGRVMLRRETGRGRPGHCW*EISSEH Trigger: GTGCTCCGAGGAGATCTCCCACCAGCAATGCCCGGG...CCTTCCTCTCCCAGTCTCTCTCCTAAGCATCACCCGCCCCCACTTAGGAGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR GCA 90 bp | CAGAGGGTGGATACACAGACCCAAGCAAAGGCTGTGGGCAGAGAGGAGTCAGGCGTCTTGCCCGGGCATTaGTGGTGGGAGATCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: QRVDTQTQAKAVGREESGVLPGH*WWEISS Trigger: CGAGGAGATCTCCCACCAGCAATGCCCGGGCAAGAC...GCCTGACTCCTCTCTGCCCACAGCCTTTGCTTGGGTCTGTGTATCCACCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CCA 90 bp | CAGAGGGTGGATACACAGACCCAAGCAAAGGCTGTGGGCAGAGAGGAGTCAGGCCACTCAGGCTCCGTGTaGGGGACTCAGATGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QRVDTQTQAKAVGREESGHSGSV*GTQMCC Trigger: GCAGCACATCTGAGTCCCCCACACGGAGCCTGAGTG...GCCTGACTCCTCTCTGCCCACAGCCTTTGCTTGGGTCTGTGTATCCACCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CCA 90 bp | TCAATCTGCCAAGGTATCCTTCCCAGGGATGGGCCCTATAGAGCCCAAACGGTACCGCAGGGGCAGCTTTaGGGGCTGCTGTCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SICQGILPRDGPYRAQTVPQGQL*GLLSRA Trigger: AGCCCTGGACAGCAGCCCCCAAAGCTGCCCCTGCGG...TACCGTTTGGGCTCTATAGGGCCCATCCCTGGGAAGGATACCTTGGCAGATTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR GCA 90 bp | GTGGATACACAGACCCAAGCAAAGGCTGTGGGCAGAGAGGAGTCAGGCATGCAAGGCAGCTTTGGGGGCTaGTGTCCAGGGCTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VDTQTQAKAVGREESGMQGSFGG*CPGLFS Trigger: GGAGAAGAGCCCTGGACAGCAGCCCCCAAAGCTGCC...TTGCATGCCTGACTCCTCTCTGCCCACAGCCTTTGCTTGGGTCTGTGTATCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CCA 90 bp | AGGGCTAAGGGACACCAACAGGTCCTCTCTCAAGGCCCCACTTGCAGAGGGTGGCAGCGTCTCATAAACTaGGTCCACCTTCCCGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: RAKGHQQVLSQGPTCRGWQRLIN*VHLPAG Trigger: ACCAGCGGGAAGGTGGACCCAGTTTATGAGACGCTG...CCACCCTCTGCAAGTGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTTAGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CCA 90 bp | TCAAGCCAGAGGGGAGGGCTAAGGGACACCAACAGGTCCTCTCTCAAGGCCCCACCCGCTGCACGAAATTaGCTGGGAAGAAGCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: SSQRGGLRDTNRSSLKAPPAARN*LGRSQL Trigger: GAGTTGGCTTCTTCCCAGCCAATTTCGTGCAGCGGG...TGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTTAGCCCTCCCCTCTGGCTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR TCA 90 bp | CTTGGGCTCCGGGTGGTCCTACCTGTAACTTCCTCGTTTCTTCCCACTTTTGACCCTCTGTTGGGCACTTaGGCTCAGAGCCCGAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: LGLRVVLPVTSSFLPTFDPLLGT*AQSPSG Trigger: TCCGCTCGGGCTCTGAGCTCAAGTGCCCAACAGAGG...GTCAAAAGTGGGAAGAAACGAGGAAGTTACAGGTAGGACCACCCGGAGCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR TCA 90 bp | TCAAGCCAGAGGGGAGGGCTAAGGGACACCAACAGGTCCTCTCTCAAGGCCCCAACGGGCTGGCTCTCTTaGAGACATGTTCCTGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SSQRGGLRDTNRSSLKAPTGWLS*RHVPGN Trigger: GTTTCCAGGAACATGTCTTCAAGAGAGCCAGCCCGT...TGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTTAGCCCTCCCCTCTGGCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR GCA 90 bp | AGGGCTAAGGGACACCAACAGGTCCTCTCTCAAGGCCCCACTTGCAGAGGGTGGATCCGATCTCCAGGCTaGAGAGCCAGGTCATTGTTC | + |
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Preference number: 4 (lower is better) Translates to: RAKGHQQVLSQGPTCRGWIRSPG*RARSLF Trigger: GAACAATGACCTGGCTCTGCAGCCTGGAGATCGGAT...CCACCCTCTGCAAGTGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTTAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CCA 90 bp | GTGGATACACAGACCCAAGCAAAGGCTGTGGGCAGAGAGGAGTCAGGCATGCAACGACGTAGGAGTACATaGGCCCCACGTCCTTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VDTQTQAKAVGREESGMQRRRST*APRPSA Trigger: TGCGGAAGGACGTGGGGCCCATGTACTCCTACGTCG...TTGCATGCCTGACTCCTCTCTGCCCACAGCCTTTGCTTGGGTCTGTGTATCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR GCA 90 bp | CTTGGGCTCCGGGTGGTCCTACCTGTAACTTCCTCGTTTCTTCCCACTTTTGACCCTGGCCTCACCCGCTaGACGAAATTGGCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLRVVLPVTSSFLPTFDPGLTR*TKLAGK Trigger: CTTCCCAGCCAATTTCGTGCAGCGGGTGAGGCCAGG...GTCAAAAGTGGGAAGAAACGAGGAAGTTACAGGTAGGACCACCCGGAGCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGTGGATACACAGACCCAAGCAAAGGCTGTGGGCAGAGAGGAGTCAGGCCGCTATCCTTGCTTCTaGTCACGCCTACGCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QRVDTQTQAKAVGREESGRYPCF*SRLRRS Trigger: AGATCTGCGTAGGCGTGAGCAGAAGCAAGGATAGCG...GCCTGACTCCTCTCTGCCCACAGCCTTTGCTTGGGTCTGTGTATCCACCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR TCA 90 bp | AGGGCTAAGGGACACCAACAGGTCCTCTCTCAAGGCCCCACTTGCAGAGGGTGGACCAGAGGTGAACGCTaGCTTTGCAAGTCTTACATC | + |
|
Preference number: 4 (lower is better) Translates to: RAKGHQQVLSQGPTCRGWTRGER*LCKSYI Trigger: GATGTAAGACTTGCAAAGTCAGCGTTCACCTCTGGT...CCACCCTCTGCAAGTGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTTAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR TCA 90 bp | AAGGCTCCTAAGTGGGGGCGGGTGATGCTTAGGAGAGAGACTGGGAGAGGAAGGACTCAGATGTGCTGCTaGAGCTGGAACGGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KAPKWGRVMLRRETGRGRTQMCC*SWNGSS Trigger: TGATGAACCGTTCCAGCTTCAGCAGCACATCTGAGT...CCTTCCTCTCCCAGTCTCTCTCCTAAGCATCACCCGCCCCCACTTAGGAGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGTCTTTGTCCAGGCTGCTCTTGGCTACCGATTTCTAGTAGACAAAGGACACTGGTTTGAGCGGTaGCAAGGGGCGAGGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TWVFVQAALGYRFLVDKGHWFER*QGARDW Trigger: CCAGTCCCTCGCCCCTTGGCACCGCTCAAACCAGTG...TCCTTTGTCTACTAGAAATCGGTAGCCAAGAGCAGCCTGGACAAAGACCCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR GCA 90 bp | AAATGTTTTGACCAAGCAAGGGCCAGCGTCTTGTTCTCCACCTGGGTCTTTGTCGCCCCTCTTCTGAGCTaGGGATGCTGCCTTCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KCFDQARASVLFSTWVFVAPLLS*GCCLPR Trigger: ACGGGGAAGGCAGCATCCGCAGCTCAGAAGAGGGGC...GACAAAGACCCAGGTGGAGAACAAGACGCTGGCCCTTGCTTGGTCAAAACATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGTCTTTGTCCAGGCTGCTCTTGGCTACCGATTTCTAGTAGACAAAGGAAGAAGGGGGAGGCAGTaGGGTTGGCGGTGTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TWVFVQAALGYRFLVDKGRRGRQ*GWRCQQ Trigger: CTGCTGACACCGCCAACCCCACTGCCTCCCCCTTCT...TCCTTTGTCTACTAGAAATCGGTAGCCAAGAGCAGCCTGGACAAAGACCCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| 3UTR CAA 72 bp | GCCTTCAAGGAACAGACTCCTACGTGTTACAATCCCTaGCAGACCTCAGTCCTGACCCTGCTCTGTCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFKEQTPTCYNP*QTSVLTLLCRP Trigger: TGGGCGACAGAGCAGGGTCAGGACTGAGGTCTGCAAGGGATTGTAACACGTAGGAGTCTGTTCCTTGAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| 3UTR CAA 72 bp | CAGGTGCTGGCACCAGGAAAAAGAAGAAGCAGCCTCTaGAGGAAGAGGTCCTTTGTCCTGCCAGGAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QVLAPGKRRSSL*RKRSFVLPGGL Trigger: TAGCCCTCCTGGCAGGACAAAGGACCTCTTCCTCAAGAGGCTGCTTCTTCTTTTTCCTGGTGCCAGCACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CCA 90 bp | AAATGTTTTGACCAAGCAAGGGCCAGCGTCTTGTTCTCCACCTGGGTCTTTGTCTTGCCCGGGCATTGCTaGTGGGAGATCTCCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCFDQARASVLFSTWVFVLPGHC*WEISSE Trigger: CTCCGAGGAGATCTCCCACCAGCAATGCCCGGGCAA...GACAAAGACCCAGGTGGAGAACAAGACGCTGGCCCTTGCTTGGTCAAAACATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGTCTTTGTCCAGGCTGCTCTTGGCTACCGATTTCTAGTAGACAAAGGACGCATGCACCAGGAGTaGGGAGCTGAAGTTGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TWVFVQAALGYRFLVDKGRMHQE*GAEVAS Trigger: CGACGCAACTTCAGCTCCCCACTCCTGGTGCATGCG...TCCTTTGTCTACTAGAAATCGGTAGCCAAGAGCAGCCTGGACAAAGACCCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGGCTCCGGGTGGTCCTACCTGTAACTTCCTCGTTTCTTCCCACTTTTGACAGGGCTCTTCTCCTCTaGTCCGGAGCCTTCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLRVVLPVTSSFLPTFDRALLL*SGAFTF Trigger: GAAAGTGAAGGCTCCGGACCAGAGGAGAAGAGCCCT...GTCAAAAGTGGGAAGAAACGAGGAAGTTACAGGTAGGACCACCCGGAGCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CCA 90 bp | GTGGATACACAGACCCAAGCAAAGGCTGTGGGCAGAGAGGAGTCAGGCATGCAAACGCCTACGCAGATCTaGTTCTCCTTGAGGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VDTQTQAKAVGREESGMQTPTQI*FSLRLM Trigger: CATGAGCCTCAAGGAGAACCAGATCTGCGTAGGCGT...TTGCATGCCTGACTCCTCTCTGCCCACAGCCTTTGCTTGGGTCTGTGTATCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTCCTACCTGTAACTTCCTCGTTTCTTCCCACTTTTGACTCCCTTTCCCAAGGGACTCCTTGTTCATaGCACAGGCTGGTGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VVLPVTSSFLPTFDSLSQGTPCS*HRLVVA Trigger: CGCCACCACCAGCCTGTGCCATGAACAAGGAGTCCC...TTGGGAAAGGGAGTCAAAAGTGGGAAGAAACGAGGAAGTTACAGGTAGGACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR TCA 90 bp | AAATGTTTTGACCAAGCAAGGGCCAGCGTCTTGTTCTCCACCTGGGTCTTTGTCTCGGAGCACCAGAGGTaGACGCTGACTTTGCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KCFDQARASVLFSTWVFVSEHQR*TLTLQV Trigger: GACTTGCAAAGTCAGCGTTCACCTCTGGTGCTCCGA...GACAAAGACCCAGGTGGAGAACAAGACGCTGGCCCTTGCTTGGTCAAAACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR TCA 90 bp | ACCTGGGTCTTTGTCCAGGCTGCTCTTGGCTACCGATTTCTAGTAGACAAAGGATTTCTGCTGGAGCTGTaGATACACTGTCCCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TWVFVQAALGYRFLVDKGFLLEL*IHCPQA Trigger: GGCCTGGGGACAGTGTATTCACAGCTCCAGCAGAAA...TCCTTTGTCTACTAGAAATCGGTAGCCAAGAGCAGCCTGGACAAAGACCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR TCA 90 bp | TTGGAAGGAGGGGCAGGTGCTGGCACCAGGAAAAAGAAGAAGCAGCCTCTTGAGTTTCCAGAGAAAGGCTaGCAGCATCGCCAAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: LEGGAGAGTRKKKKQPLEFPEKG*QHRQTF Trigger: GAATGTTTGGCGATGCTGTCAGCCTTTCTCTGGAAA...CTCAAGAGGCTGCTTCTTCTTTTTCCTGGTGCCAGCACCTGCCCCTCCTTCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTCCTACCTGTAACTTCCTCGTTTCTTCCCACTTTTGACTCCCTTTCCCAATCAGTGCCAGGGAGGTaGCATAGCGCAGCGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VVLPVTSSFLPTFDSLSQSVPGR*HSAASH Trigger: ATGAGACGCTGCGCTATGGCACCTCCCTGGCACTGA...TTGGGAAAGGGAGTCAAAAGTGGGAAGAAACGAGGAAGTTACAGGTAGGACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAACTTTCCATAGCCTTCCTCAATCTGCCAAGGTATCCTTCCCAGGGATGGCTTCTGAGCTGCGGATaGTGCCTTCCCCGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KELSIAFLNLPRYPSQGWLLSCG*CLPRLL Trigger: CAGAAGACGGGGAAGGCAGCATCCGCAGCTCAGAAG...CCATCCCTGGGAAGGATACCTTGGCAGATTGAGGAAGGCTATGGAAAGTTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CCA 90 bp | AAATGTTTTGACCAAGCAAGGGCCAGCGTCTTGTTCTCCACCTGGGTCTTTGTCGTAGACCCCTGTCTGTaGATGCAGGTGGTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KCFDQARASVLFSTWVFVVDPCL*MQVVEK Trigger: CTTCTCCACCACCTGCATCCACAGACAGGGGTCTAC...GACAAAGACCCAGGTGGAGAACAAGACGCTGGCCCTTGCTTGGTCAAAACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTCCTACCTGTAACTTCCTCGTTTCTTCCCACTTTTGACTCCCTTTCCCAATGGAGCTTGGTTTCTTaGAGGGTGGAGACGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VVLPVTSSFLPTFDSLSQWSLVS*RVETVP Trigger: AGGGACCGTCTCCACCCTCCAAGAAACCAAGCTCCA...TTGGGAAAGGGAGTCAAAAGTGGGAAGAAACGAGGAAGTTACAGGTAGGACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAACTTTCCATAGCCTTCCTCAATCTGCCAAGGTATCCTTCCCAGGGATGGTGTTCCTGGAAACTGTaGAGCCTCACTGGTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KELSIAFLNLPRYPSQGWCSWKL*SLTGLS Trigger: GCTCAAACCAGTGAGGCTGCACAGTTTCCAGGAACA...CCATCCCTGGGAAGGATACCTTGGCAGATTGAGGAAGGCTATGGAAAGTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAACTTTCCATAGCCTTCCTCAATCTGCCAAGGTATCCTTCCCAGGGATGGGCCTTCACTTTCTGCTaGAGCTGTGAATACACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KELSIAFLNLPRYPSQGWAFTFC*SCEYTV Trigger: GACAGTGTATTCACAGCTCCAGCAGAAAGTGAAGGC...CCATCCCTGGGAAGGATACCTTGGCAGATTGAGGAAGGCTATGGAAAGTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CAA 90 bp | CCTAGGGTGGGCCTCACTATGGCAACCCGACTAGGTGGTGCTTGGGCTCCGGGTACCTCTGTTGGGCACTaGAGCTCAGAGCCCGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PRVGLTMATRLGGAWAPGTSVGH*SSEPER Trigger: CCGCTCGGGCTCTGAGCTCAAGTGCCCAACAGAGGT...ACCCGGAGCCCAAGCACCACCTAGTCGGGTTGCCATAGTGAGGCCCACCCTAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS CCA 90 bp | GCTGGCTCTCTTGAAGACATGTTCCTGGAAACTGTGCAGCCTCACTaGTTTGAGCGGTGCCAAGGGGCGAGGGACTGGGCACGGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGSLEDMFLETVQPH*FERCQGARDWARGG Trigger: CCCTCCCCGTGCCCAGTCCCTCGCCCCTTGGCACCGCTCAAACCAGTGAGGCTGCACAGTTTCCAGGAACATGTCTTCAAGAGAGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS TCA 90 bp | CGTCACGCTCACTCAGGCTCCGTGTGGGGGACTCAGATGTGCTGCTaGAGCTGGAACGGTTCATCAGTGCCAGGGAGGTGCCATAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RHAHSGSVWGTQMCC*SWNGSSVPGRCHSA Trigger: TGCGCTATGGCACCTCCCTGGCACTGATGAACCGTTCCAGCTTCAGCAGCACATCTGAGTCCCCCACACGGAGCCTGAGTGAGCGTGACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017544.9 ENSMUST00000131519.2 |
||
| CDS CCA 90 bp | GCTGGTCCCAGTAGGTGGGGACTCCTTGTTCATGGCACAGGCTGGTaGTGGCGCATGCACCAGGAGTGGGGAGCTGAAGTTGCGTCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGPSRWGLLVHGTGW*WRMHQEWGAEVASK Trigger: TTTCGACGCAACTTCAGCTCCCCACTCCTGGTGCATGCGCCACCACCAGCCTGTGCCATGAACAAGGAGTCCCCACCTACTGGGACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS CCA 90 bp | CAGCGTCTCATAAACTGGGTCCACCTTCCCGCTGGTCCCAGTAGGTaGGGACTCCTTGTTCATGGCACAGGCTGGTGGTGGCGCATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QRLINWVHLPAGPSR*GLLVHGTGWWWRMH Trigger: GTGCATGCGCCACCACCAGCCTGTGCCATGAACAAGGAGTCCCCACCTACTGGGACCAGCGGGAAGGTGGACCCAGTTTATGAGACGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS CCA 90 bp | CCGCAGGGGCAGCTTTGGGGGCTGCTGTCCAGGGCTCTTCTCCTCTaGTCCGGAGCCTTCACTTTCTGCTGGAGCTGTGAATACACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PQGQLWGLLSRALLL*SGAFTFCWSCEYTV Trigger: GACAGTGTATTCACAGCTCCAGCAGAAAGTGAAGGCTCCGGACCAGAGGAGAAGAGCCCTGGACAGCAGCCCCCAAAGCTGCCCCTGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTGGATACACAGACCCAAGCAAAGGCTGTGGGCAGAGAGGAGTCAGGCTGCAGCCTCACTGGTTaGAGCGGTGCCAAGGGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QRVDTQTQAKAVGREESGCSLTG*SGAKGR Trigger: TCGCCCCTTGGCACCGCTCAAACCAGTGAGGCTGCA...GCCTGACTCCTCTCTGCCCACAGCCTTTGCTTGGGTCTGTGTATCCACCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CAA 90 bp | TCAAGCCAGAGGGGAGGGCTAAGGGACACCAACAGGTCCTCTCTCAAGGCCCCAACCAAACCCCGCTTCTaGCCACTGCTGACGCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSQRGGLRDTNRSSLKAPTKPRF*PLLTRM Trigger: CATCCGCGTCAGCAGTGGCAAGAAGCGGGGTTTGGT...TGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTTAGCCCTCCCCTCTGGCTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS TCA 90 bp | GAGGCAGTGGGGTTGGCGGTGTCAGCAGCACCTCTGTTGGGCACTTaGGCTCAGAGCCCGAGCGGAGGAAGAAGTTCTCTACGCTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: EAVGLAVSAAPLLGT*AQSPSGGRSSLRSY Trigger: GTAAGAGCGTAGAGAACTTCTTCCTCCGCTCGGGCTCTGAGCTCAAGTGCCCAACAGAGGTGCTGCTGACACCGCCAACCCCACTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CAA 90 bp | TCAAGCCAGAGGGGAGGGCTAAGGGACACCAACAGGTCCTCTCTCAAGGCCCCAGTAGGTGGGGACTCCTaGTTCATGGCACAGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSQRGGLRDTNRSSLKAPVGGDS*FMAQAG Trigger: ACCAGCCTGTGCCATGAACAAGGAGTCCCCACCTAC...TGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTTAGCCCTCCCCTCTGGCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS TCA 90 bp | TCATGGCACAGGCTGGTGGTGGCGCATGCACCAGGAGTGGGGAGCTaGAGTTGCGTCGAAAAGATGTGGATGTCTTGCCCGGGCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SWHRLVVAHAPGVGS*SCVEKMWMSCPGIA Trigger: AGCAATGCCCGGGCAAGACATCCACATCTTTTCGACGCAACTTCAGCTCCCCACTCCTGGTGCATGCGCCACCACCAGCCTGTGCCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS CCA 90 bp | ACTGTGGCCTCTCTCTGGGGCCTGCTGTCCAGGGCTCTTCTCCTCTaGTCCGGAGCCTTCACTTTCTGCTGGAGCTGTGAATACACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TVASLWGLLSRALLL*SGAFTFCWSCEYTV Trigger: GACAGTGTATTCACAGCTCCAGCAGAAAGTGAAGGCTCCGGACCAGAGGAGAAGAGCCCTGGACAGCAGGCCCCAGAGAGAGGCCACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131519.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTGGATACACAGACCCAAGCAAAGGCTGTGGGCAGAGAGGAGTCAGGCACTCGGTCGCCAATCTaGCCCTTCCACCAGTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: QRVDTQTQAKAVGREESGTRSPI*PFHQSS Trigger: CGAAGACTGGTGGAAGGGCAAGATTGGCGACCGAGT...GCCTGACTCCTCTCTGCCCACAGCCTTTGCTTGGGTCTGTGTATCCACCCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS CCA 90 bp | TGGTGGCACAGTTCACACGGGCTGGCTCTCTTGAAGACATGTTCCTaGAAACTGTGCAGCCTCACTGGTTTGAGCGGTGCCAAGGGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: WWHSSHGLALLKTCS*KLCSLTGLSGAKGR Trigger: TCGCCCCTTGGCACCGCTCAAACCAGTGAGGCTGCACAGTTTCCAGGAACATGTCTTCAAGAGAGCCAGCCCGTGTGAACTGTGCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS CCA 90 bp | TCGCCAAACATTCTCTCCTGGCCTCACCCGCTGCACGAAATTGGCTaGGAAGAAGCCAACTCGGTCGCCAATCTTGCCCTTCCACCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPNILSWPHPLHEIG*EEANSVANLALPPV Trigger: GACTGGTGGAAGGGCAAGATTGGCGACCGAGTTGGCTTCTTCCCAGCCAATTTCGTGCAGCGGGTGAGGCCAGGAGAGAATGTTTGGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS CCA 90 bp | AGCATCGCCAAACATTCTCTCCTGGCCTCACCCGCTGCACGAAATTaGCTGGGAAGAAGCCAACTCGGTCGCCAATCTTGCCCTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SIAKHSLLASPAARN*LGRSQLGRQSCPST Trigger: GGTGGAAGGGCAAGATTGGCGACCGAGTTGGCTTCTTCCCAGCCAATTTCGTGCAGCGGGTGAGGCCAGGAGAGAATGTTTGGCGATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CAA 90 bp | TCAAGCCAGAGGGGAGGGCTAAGGGACACCAACAGGTCCTCTCTCAAGGCCCCACTTCGAAGGATGGTTTaGAGGGAGAGGGAGCGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SSQRGGLRDTNRSSLKAPLRRMV*RERERL Trigger: TAAGCGCTCCCTCTCCCTCAAAACCATCCTTCGAAG...TGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTTAGCCCTCCCCTCTGGCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CAA 90 bp | AGGGCTAAGGGACACCAACAGGTCCTCTCTCAAGGCCCCACTTGCAGAGGGTGGCACGGGCTGGCTCTCTaGAAGACATGTTCCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RAKGHQQVLSQGPTCRGWHGLAL*KTCSWK Trigger: TTTCCAGGAACATGTCTTCAAGAGAGCCAGCCCGTG...CCACCCTCTGCAAGTGGGGCCTTGAGAGAGGACCTGTTGGTGTCCCTTAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CAA 90 bp | TCAATCTGCCAAGGTATCCTTCCCAGGGATGGGCCCTATAGAGCCCAAACGGTACTGGAGCTTGGTTTCTaGGAGGGTGGAGACGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SICQGILPRDGPYRAQTVLELGF*EGGDGP Trigger: GGGACCGTCTCCACCCTCCAAGAAACCAAGCTCCAG...TACCGTTTGGGCTCTATAGGGCCCATCCCTGGGAAGGATACCTTGGCAGATTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS TCA 90 bp | GGCATTGCTGGTGGGAGATCTCCTCGGAGCACCAGAGGTGAACGCTaGCTTTGCAAGTCTTACATCGCAAGCCCTGTTTGGAGTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GIAGGRSPRSTRGER*LCKSYIASPVWSFP Trigger: TGGGAAACTCCAAACAGGGCTTGCGATGTAAGACTTGCAAAGTCAGCGTTCACCTCTGGTGCTCCGAGGAGATCTCCCACCAGCAATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS CCA 90 bp | CTTGTTTCCAGAGAAAGGCTGACAGCATCGCCAAACATTCTCTCCTaGCCTCACCCGCTGCACGAAATTGGCTGGGAAGAAGCCAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: LVSRERLTASPNILS*PHPLHEIGWEEANS Trigger: CGAGTTGGCTTCTTCCCAGCCAATTTCGTGCAGCGGGTGAGGCCAGGAGAGAATGTTTGGCGATGCTGTCAGCCTTTCTCTGGAAACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
||
| CDS-3UTR CAA 90 bp | CTTGGGCTCCGGGTGGTCCTACCTGTAACTTCCTCGTTTCTTCCCACTTTTGACACCCGCTGCACGAAATaGGCTGGGAAGAAGCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: LGLRVVLPVTSSFLPTFDTRCTK*AGKKPT Trigger: AGTTGGCTTCTTCCCAGCCAATTTCGTGCAGCGGGT...GTCAAAAGTGGGAAGAAACGAGGAAGTTACAGGTAGGACCACCCGGAGCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CAA 90 bp | TCAATCTGCCAAGGTATCCTTCCCAGGGATGGGCCCTATAGAGCCCAAACGGTACATCGCAAGCCCTGTTaGGAGTTTCCCACAATGAGC | + |
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Preference number: 5 (lower is better) Translates to: SICQGILPRDGPYRAQTVHRKPC*EFPTMS Trigger: GCTCATTGTGGGAAACTCCAAACAGGGCTTGCGATG...TACCGTTTGGGCTCTATAGGGCCCATCCCTGGGAAGGATACCTTGGCAGATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CAA 90 bp | GTGGTCCTACCTGTAACTTCCTCGTTTCTTCCCACTTTTGACTCCCTTTCCCAAAAAGATGTGGATGTCTaGCCCGGGCATTGCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: VVLPVTSSFLPTFDSLSQKDVDV*PGHCWW Trigger: CCACCAGCAATGCCCGGGCAAGACATCCACATCTTT...TTGGGAAAGGGAGTCAAAAGTGGGAAGAAACGAGGAAGTTACAGGTAGGACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS-3UTR CAA 90 bp | GTGGTCCTACCTGTAACTTCCTCGTTTCTTCCCACTTTTGACTCCCTTTCCCAATTAAATCGCTGGAGCTaGGTTTCTTGGAGGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: VVLPVTSSFLPTFDSLSQLNRWS*VSWRVE Trigger: CTCCACCCTCCAAGAAACCAAGCTCCAGCGATTTAA...TTGGGAAAGGGAGTCAAAAGTGGGAAGAAACGAGGAAGTTACAGGTAGGACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS GCA 72 bp | TTCCTGGAAACTGTGCAGCCTCACTGGTTTGAGCGGTaGCAAGGGGCGAGGGACTGGGCACGGGGAGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: FLETVQPHWFER*QGARDWARGGC Trigger: ACACCCTCCCCGTGCCCAGTCCCTCGCCCCTTGGCACCGCTCAAACCAGTGAGGCTGCACAGTTTCCAGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CCA 72 bp | GAGGCAGGAACTTGTAGAGGGCGACGTAGGAGTACATaGGCCCCACGTCCTTCCGCAGGGGCAGCTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: EAGTCRGRRRST*APRPSAGAALG Trigger: CCCCAAAGCTGCCCCTGCGGAAGGACGTGGGGCCCATGTACTCCTACGTCGCCCTCTACAAGTTCCTGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017544.9 ENSMUST00000131519.2 |
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| CDS CAA 72 bp | TCCACCTTCCCGCTGGTCCCAGTAGGTGGGGACTCCTaGTTCATGGCACAGGCTGGTGGTGGCGCATGCACC | + |
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Preference number: 6 (lower is better) Translates to: STFPLVPVGGDS*FMAQAGGGACT Trigger: GGTGCATGCGCCACCACCAGCCTGTGCCATGAACAAGGAGTCCCCACCTACTGGGACCAGCGGGAAGGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CAA 90 bp | GCACAGGCTGGTGGTGGCGCATGCACCAGGAGTGGGGAGCTGAAGTaGCGTCGAAAAGATGTGGATGTCTTGCCCGGGCATTGCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: AQAGGGACTRSGELK*RRKDVDVLPGHCWW Trigger: CCACCAGCAATGCCCGGGCAAGACATCCACATCTTTTCGACGCAACTTCAGCTCCCCACTCCTGGTGCATGCGCCACCACCAGCCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS TCA 72 bp | CACTCAGGCTCCGTGTGGGGGACTCAGATGTGCTGCTaGAGCTGGAACGGTTCATCAGTGCCAGGGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: HSGSVWGTQMCC*SWNGSSVPGRC Trigger: GCACCTCCCTGGCACTGATGAACCGTTCCAGCTTCAGCAGCACATCTGAGTCCCCCACACGGAGCCTGAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017544.9 ENSMUST00000131519.2 |
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| CDS CAA 72 bp | TCTGCCAAGGAGTCGGCTGGCACCAAACCCCGCTTCTaGCCACTGCTGACGCGGATGAAGCCATCGCTATCC | + |
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Preference number: 6 (lower is better) Translates to: SAKESAGTKPRF*PLLTRMKPSLS Trigger: GGATAGCGATGGCTTCATCCGCGTCAGCAGTGGCAAGAAGCGGGGTTTGGTGCCAGCCGACTCCTTGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CAA 90 bp | GGAGGCAGTGGGGTTGGCGGTGTCAGCAGCACCTCTGTTGGGCACTaGAGCTCAGAGCCCGAGCGGAGGAAGAAGTTCTCTACGCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: GGSGVGGVSSTSVGH*SSEPERRKKFSTLL Trigger: TAAGAGCGTAGAGAACTTCTTCCTCCGCTCGGGCTCTGAGCTCAAGTGCCCAACAGAGGTGCTGCTGACACCGCCAACCCCACTGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CAA 90 bp | GCTCTCTTGAAGACATGTTCCTGGAAACTGTGCAGCCTCACTGGTTaGAGCGGTGCCAAGGGGCGAGGGACTGGGCACGGGGAGGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: ALLKTCSWKLCSLTG*SGAKGRGTGHGEGV Trigger: AACACCCTCCCCGTGCCCAGTCCCTCGCCCCTTGGCACCGCTCAAACCAGTGAGGCTGCACAGTTTCCAGGAACATGTCTTCAAGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS TCA 72 bp | AGGCTGGTGGTGGCGCATGCACCAGGAGTGGGGAGCTaGAGTTGCGTCGAAAAGATGTGGATGTCTTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: RLVVAHAPGVGS*SCVEKMWMSCP Trigger: CGGGCAAGACATCCACATCTTTTCGACGCAACTTCAGCTCCCCACTCCTGGTGCATGCGCCACCACCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS TCA 72 bp | CATAAACTGGGTCCACCTTCCCGCTGGTCCCCACAATaGGCTGGTGGCACAGTTCACACGGGCTGGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: HKLGPPSRWSPQ*AGGTVHTGWLS Trigger: AGAGAGCCAGCCCGTGTGAACTGTGCCACCAGCTCATTGTGGGGACCAGCGGGAAGGTGGACCCAGTTTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131519.2 |
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| CDS CCA 72 bp | AGTAGGTGGGGACTCCTTGTTCATGGCACAGGCTGGTaGTGGCGCATGCACCAGGAGTGGGGAGCTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SRWGLLVHGTGW*WRMHQEWGAEV Trigger: AACTTCAGCTCCCCACTCCTGGTGCATGCGCCACCACCAGCCTGTGCCATGAACAAGGAGTCCCCACCTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CCA 72 bp | ATAAACTGGGTCCACCTTCCCGCTGGTCCCAGTAGGTaGGGACTCCTTGTTCATGGCACAGGCTGGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: INWVHLPAGPSR*GLLVHGTGWWW Trigger: CCACCACCAGCCTGTGCCATGAACAAGGAGTCCCCACCTACTGGGACCAGCGGGAAGGTGGACCCAGTTTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CCA 72 bp | CAGCTTTGGGGGCTGCTGTCCAGGGCTCTTCTCCTCTaGTCCGGAGCCTTCACTTTCTGCTGGAGCTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: QLWGLLSRALLL*SGAFTFCWSCE Trigger: TTCACAGCTCCAGCAGAAAGTGAAGGCTCCGGACCAGAGGAGAAGAGCCCTGGACAGCAGCCCCCAAAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CAA 90 bp | CCCCGCTTCTTGCCACTGCTGACGCGGATGAAGCCATCGCTATCCTaGCTTCTGCTCACGCCTACGCAGATCTGGTTCTCCTTGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: PRFLPLLTRMKPSLS*LLLTPTQIWFSLRL Trigger: GAGCCTCAAGGAGAACCAGATCTGCGTAGGCGTGAGCAGAAGCAAGGATAGCGATGGCTTCATCCGCGTCAGCAGTGGCAAGAAGCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CAA 90 bp | AGTCATAGACAGTGGAGACCCCTCCCAATCTTCACGGCTCCTGTCTaGACTGTGGCCTCTCTCTGGGGCCTGCTGTCCAGGGCTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SHRQWRPLPIFTAPV*TVASLWGLLSRALL Trigger: GAGAAGAGCCCTGGACAGCAGGCCCCAGAGAGAGGCCACAGTCAAGACAGGAGCCGTGAAGATTGGGAGGGGTCTCCACTGTCTATGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131519.2 |
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| CDS CAA 90 bp | CAGCATCGCCAAACATTCTCTCCTGGCCTCACCCGCTGCACGAAATaGGCTGGGAAGAAGCCAACTCGGTCGCCAATCTTGCCCTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: QHRQTFSPGLTRCTK*AGKKPTRSPILPFH Trigger: GTGGAAGGGCAAGATTGGCGACCGAGTTGGCTTCTTCCCAGCCAATTTCGTGCAGCGGGTGAGGCCAGGAGAGAATGTTTGGCGATGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS GCA 72 bp | GACTCCTTGTTCATGGCACAGGCTGGTGGTGGCGCATaGACCAGGAGTGGGGAGCTGAAGTTGCGTCGAAAA | + |
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Preference number: 6 (lower is better) Translates to: DSLFMAQAGGGA*TRSGELKLRRK Trigger: TTTTCGACGCAACTTCAGCTCCCCACTCCTGGTGCATGCGCCACCACCAGCCTGTGCCATGAACAAGGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS GCA 72 bp | CAGCATCGCCAAACATTCTCTCCTGGCCTCACCCGCTaGACGAAATTGGCTGGGAAGAAGCCAACTCGGTCG | + |
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Preference number: 6 (lower is better) Translates to: QHRQTFSPGLTR*TKLAGKKPTRS Trigger: CGACCGAGTTGGCTTCTTCCCAGCCAATTTCGTGCAGCGGGTGAGGCCAGGAGAGAATGTTTGGCGATGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CCA 72 bp | GCTCTTCTCCTCTGGTCCGGAGCCTTCACTTTCTGCTaGAGCTGTGAATACACTGTCCCCAGGCCCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ALLLWSGAFTFC*SCEYTVPRPLF Trigger: GAAGAGGGGCCTGGGGACAGTGTATTCACAGCTCCAGCAGAAAGTGAAGGCTCCGGACCAGAGGAGAAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017544.9 ENSMUST00000131519.2 |
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| CDS CAA 72 bp | GGGGAGCTGAAGTTGCGTCGAAAAGATGTGGATGTCTaGCCCGGGCATTGCTGGTGGGAGATCTCCTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: GELKLRRKDVDV*PGHCWWEISSE Trigger: CTCCGAGGAGATCTCCCACCAGCAATGCCCGGGCAAGACATCCACATCTTTTCGACGCAACTTCAGCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CCA 72 bp | ATTCTCTCCTGGCCTCACCCGCTGCACGAAATTGGCTaGGAAGAAGCCAACTCGGTCGCCAATCTTGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: ILSWPHPLHEIG*EEANSVANLAL Trigger: AAGGGCAAGATTGGCGACCGAGTTGGCTTCTTCCCAGCCAATTTCGTGCAGCGGGTGAGGCCAGGAGAGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CAA 72 bp | TTGCCACTGCTGACGCGGATGAAGCCATCGCTATCCTaGCTTCTGCTCACGCCTACGCAGATCTGGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LPLLTRMKPSLS*LLLTPTQIWFS Trigger: GGAGAACCAGATCTGCGTAGGCGTGAGCAGAAGCAAGGATAGCGATGGCTTCATCCGCGTCAGCAGTGGCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS TCA 72 bp | GGTGGGAGATCTCCTCGGAGCACCAGAGGTGAACGCTaGCTTTGCAAGTCTTACATCGCAAGCCCTGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: GGRSPRSTRGER*LCKSYIASPVW Trigger: CCAAACAGGGCTTGCGATGTAAGACTTGCAAAGTCAGCGTTCACCTCTGGTGCTCCGAGGAGATCTCCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS GCA 72 bp | CTCAGATGTGCTGCTGAAGCTGGAACGGTTCATCAGTaGCAGGGAGGTGCCATAGCGCAGCGTCTCATAAAC | + |
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Preference number: 6 (lower is better) Translates to: LRCAAEAGTVHQ*QGGAIAQRLIN Trigger: GTTTATGAGACGCTGCGCTATGGCACCTCCCTGGCACTGATGAACCGTTCCAGCTTCAGCAGCACATCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017544.9 ENSMUST00000131519.2 |
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| CDS CCA 72 bp | CGCAAGCCCTGTTTGGAGTTTCCCACAATGAGCTGGTaGCACAGTTCACACGGGCTGGCTCTCTTGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: RKPCLEFPTMSW*HSSHGLALLKT Trigger: TGTCTTCAAGAGAGCCAGCCCGTGTGAACTGTGCCACCAGCTCATTGTGGGAAACTCCAAACAGGGCTTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CCA 72 bp | CATCGCAAGCCCTGTTTGGAGTTTCCCACAATGAGCTaGTGGCACAGTTCACACGGGCTGGCTCTCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: HRKPCLEFPTMS*WHSSHGLALLK Trigger: CTTCAAGAGAGCCAGCCCGTGTGAACTGTGCCACCAGCTCATTGTGGGAAACTCCAAACAGGGCTTGCGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CAA 72 bp | ATGAGCTGGTGGCACAGTTCACACGGGCTGGCTCTCTaGAAGACATGTTCCTGGAAACTGTGCAGCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: MSWWHSSHGLAL*KTCSWKLCSLT Trigger: AGTGAGGCTGCACAGTTTCCAGGAACATGTCTTCAAGAGAGCCAGCCCGTGTGAACTGTGCCACCAGCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CAA 90 bp | TTTCCCACAATGAGCTGGTGGCACAGTTCACACGGGCTGGCTCTCTaGAAGACATGTTCCTGGAAACTGTGCAGCCTCACTGGTTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: FPTMSWWHSSHGLAL*KTCSWKLCSLTGLS Trigger: GCTCAAACCAGTGAGGCTGCACAGTTTCCAGGAACATGTCTTCAAGAGAGCCAGCCCGTGTGAACTGTGCCACCAGCTCATTGTGGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CAA 90 bp | GAGCGGAGGAAGAAGTTCTCTACGCTCTTACTTCGAAGGATGGTTTaGAGGGAGAGGGAGCGCTTAAATCGCTGGAGCTTGGTTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: ERRKKFSTLLLRRMV*RERERLNRWSLVSW Trigger: CCAAGAAACCAAGCTCCAGCGATTTAAGCGCTCCCTCTCCCTCAAAACCATCCTTCGAAGTAAGAGCGTAGAGAACTTCTTCCTCCGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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| CDS CAA 72 bp | ACGCTGACTTTGCAAGTCTTACATCGCAAGCCCTGTTaGGAGTTTCCCACAATGAGCTGGTGGCACAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: TLTLQVLHRKPC*EFPTMSWWHSS Trigger: TGAACTGTGCCACCAGCTCATTGTGGGAAACTCCAAACAGGGCTTGCGATGTAAGACTTGCAAAGTCAGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017544.9 |
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