Pregenerated sensors for STAC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032502Ensembl transcript IDs: ENSMUST00000035083.8, ENSMUST00000161995.2
Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCGGTGAGTCAGAACCACTGCCTGAGCCGCCCTTCTTCGTTCTCTaGGCCAGGGACGTGCCGAACCGGAGGGCCTCATACACGGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: GGESEPLPEPPFFVL*ARDVPNRRASYTGS Trigger: GGACCCCGTGTATGAGGCCCTCCGGTTCGGCACGTCCCTGGCCCAGAGAACGAAGAAGGGCGGCTCAGGCAGTGGTTCTGACTCACCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | GCAGACTCCAGCCTTGCACAGGTGGGCAGGAAGGGAGCTGAGTCCTaGGCAGCCTTAGCTACAGCCCACTTACTGCCCCCGGCTCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: ADSSLAQVGRKGAES*AALATAHLLPPAPL Trigger: GAGGGGAGCCGGGGGCAGTAAGTGGGCTGTAGCTAAGGCTGCCCAGGACTCAGCTCCCTTCCTGCCCACCTGTGCAAGGCTGGAGTCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR GCA 90 bp | AACCACTGCCTGAGCCGCCCTTCTTCGTTCTCTGGGCCAGGGACGTaGCGAACCGGAGGGCCTCATACACGGGGTCCACTTTATTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: NHCLSRPSSFSGPGT*RTGGPHTRGPLYCH Trigger: GTGGCAATAAAGTGGACCCCGTGTATGAGGCCCTCCGGTTCGGCACGTCCCTGGCCCAGAGAACGAAGAAGGGCGGCTCAGGCAGTGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | AAGGGCTCCTTCCTTGTCCCCACTCCCGCTTCTCCTTGCTGCTGCTaGACTCTGTGCCTTGGACCTTGCCCTGCCACTTCGGAGCCACTG | + |
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Preference number: 1 (lower is better) Translates to: KGSFLVPTPASPCCC*TLCLGPCPATSEPL Trigger: CAGTGGCTCCGAAGTGGCAGGGCAAGGTCCAAGGCACAGAGTCCAGCAGCAGCAAGGAGAAGCGGGAGTGGGGACAAGGAAGGAGCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR GCA 90 bp | CGCTTCTCCTTGCTGCTGCTGGACTCTGTGCCTTGGACCTTGCCCTaGCACTTCGGAGCCACTGGAATAGCAAGGACGCCCTCGTTCTCG | + |
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Preference number: 1 (lower is better) Translates to: RFSLLLLDSVPWTLP*HFGATGIARTPSFS Trigger: CGAGAACGAGGGCGTCCTTGCTATTCCAGTGGCTCCGAAGTGGCAGGGCAAGGTCCAAGGCACAGAGTCCAGCAGCAGCAAGGAGAAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR GCA 90 bp | CTACAAGCTCTGAAGTCGAGGTTCTGGGCGGTGAGTCAGAACCACTaGCTGAGCCGCCCTTCTTCGTTCTCTGGGCCAGGGACGTGCCGA | + |
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Preference number: 1 (lower is better) Translates to: LQALKSRFWAVSQNH*LSRPSSFSGPGTCR Trigger: TCGGCACGTCCCTGGCCCAGAGAACGAAGAAGGGCGGCTCAGGCAGTGGTTCTGACTCACCGCCCAGAACCTCGACTTCAGAGCTTGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | CAAGTCTCCCTGTTTTCTGGGCACCCATCCGTGCAGCTGCTCCTCTaGGTGGACACAGAGAGATCAGCAGCGCTGGCCTCCTGCTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: QVSLFSGHPSVQLLL*VDTERSAALASCLG Trigger: TCCCAAGCAGGAGGCCAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAGCTGCACGGATGGGTGCCCAGAAAACAGGGAGACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | CCGTGCAGCTGCTCCTCTGGGTGGACACAGAGAGATCAGCAGCGCTaGCCTCCTGCTTGGGAAGGGACTGCTACAGTCACACGTCTACCA | + |
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Preference number: 1 (lower is better) Translates to: PCSCSSGWTQRDQQR*PPAWEGTATVTRLP Trigger: TGGTAGACGTGTGACTGTAGCAGTCCCTTCCCAAGCAGGAGGCCAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAGCTGCACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR GCA 90 bp | CAGCTCTTCAAGTCTCCCTGTTTTCTGGGCACCCATCCGTGCAGCTaGTCCTCTGGGTGGACACAGAGAGATCAGCAGCGCTGGCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: QLFKSPCFLGTHPCS*SSGWTQRDQQRWPP Trigger: AGGAGGCCAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAGCTGCACGGATGGGTGCCCAGAAAACAGGGAGACTTGAAGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | CATCGGCCTCTTCAGGGACGTCTACAAGCTCTGAAGTCGAGGTTCTaGGCGGTGAGTCAGAACCACTGCCTGAGCCGCCCTTCTTCGTTC | + |
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Preference number: 1 (lower is better) Translates to: HRPLQGRLQALKSRF*AVSQNHCLSRPSSF Trigger: GAACGAAGAAGGGCGGCTCAGGCAGTGGTTCTGACTCACCGCCCAGAACCTCGACTTCAGAGCTTGTAGACGTCCCTGAAGAGGCCGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR TCA 90 bp | ACTTGGCTACTCGGCAGCTCCAAACTTCTCACTAGGACCACACCATaGCCTGGAGCAGACTCCAGCCTTGCACAGGTGGGCAGGAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: TWLLGSSKLLTRTTP*PGADSSLAQVGRKG Trigger: TCCCTTCCTGCCCACCTGTGCAAGGCTGGAGTCTGCTCCAGGTCATGGTGTGGTCCTAGTGAGAAGTTTGGAGCTGCCGAGTAGCCAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | TCCTCTGGGTGGACACAGAGAGATCAGCAGCGCTGGCCTCCTGCTTaGGAAGGGACTGCTACAGTCACACGTCTACCAGTACATCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: SSGWTQRDQQRWPPA*EGTATVTRLPVHPV Trigger: CACTGGATGTACTGGTAGACGTGTGACTGTAGCAGTCCCTTCCCAAGCAGGAGGCCAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | CCAGCCAAACTGAGACACAAACTGAGCAGGAGCTGGAGTGAACCCTaGGGTGTTGGGAGCCGGAAGGTTGACCTTCTTGATTCTCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: PAKLRHKLSRSWSEP*GVGSRKVDLLDSLQ Trigger: CTGCAGAGAATCAAGAAGGTCAACCTTCCGGCTCCCAACACCCCAGGGTTCACTCCAGCTCCTGCTCAGTTTGTGTCTCAGTTTGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | CTTGGGAAGGGACTGCTACAGTCACACGTCTACCAGTACATCCAGTaGGACGAGGCCTCTCTTCTTCCCACTGAGGACTCTGATGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: LGKGLLQSHVYQYIQ*DEASLLPTEDSDEA Trigger: GGCTTCATCAGAGTCCTCAGTGGGAAGAAGAGAGGCCTCGTCCCACTGGATGTACTGGTAGACGTGTGACTGTAGCAGTCCCTTCCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | AGAACAATCCTGCCAGCCAAACTGAGACACAAACTGAGCAGGAGCTaGAGTGAACCCTGGGGTGTTGGGAGCCGGAAGGTTGACCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: RTILPAKLRHKLSRS*SEPWGVGSRKVDLL Trigger: AAGAAGGTCAACCTTCCGGCTCCCAACACCCCAGGGTTCACTCCAGCTCCTGCTCAGTTTGTGTCTCAGTTTGGCTGGCAGGATTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR TCA 90 bp | TGTGAGCTAAGCCCCAGCTTCCTCTGTTTGCACAGAGATGAAGCATaGCCCGGTCCGTTCCACTTCACAGCTGCTGGAGCTGAAAACGTT | + |
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Preference number: 1 (lower is better) Translates to: CELSPSFLCLHRDEA*PGPFHFTAAGAENV Trigger: AACGTTTTCAGCTCCAGCAGCTGTGAAGTGGAACGGACCGGGTCATGCTTCATCTCTGTGCAAACAGAGGAAGCTGGGGCTTAGCTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR TCA 90 bp | CCAAAGTCACATTTAAACATGTCAGTGACTGCTAGGAAGCAGGTCTaGATGCTGGGACGGGGCTTGGGAGGAAGGCATCGCAGTGTGGTA | + |
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Preference number: 1 (lower is better) Translates to: PKSHLNMSVTARKQV*MLGRGLGGRHRSVV Trigger: TACCACACTGCGATGCCTTCCTCCCAAGCCCCGTCCCAGCATTCAGACCTGCTTCCTAGCAGTCACTGACATGTTTAAATGTGACTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | AGGTCTGAATGCTGGGACGGGGCTTGGGAGGAAGGCATCGCAGTGTaGTATGTTCTTGTAAACATCGGTACAGGTAGAGAGCAATATCCC | + |
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Preference number: 1 (lower is better) Translates to: RSECWDGAWEEGIAV*YVLVNIGTGREQYP Trigger: GGGATATTGCTCTCTACCTGTACCGATGTTTACAAGAACATACCACACTGCGATGCCTTCCTCCCAAGCCCCGTCCCAGCATTCAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR TCA 90 bp | TCCTCCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGGGATGGAATaGAAATGGAGACTCTTCCCTACTTCCCATTCCCAGCCTCACCTG | + |
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Preference number: 1 (lower is better) Translates to: SSTGRSGAPDKEGME*KWRLFPTSHSQPHL Trigger: CAGGTGAGGCTGGGAATGGGAAGTAGGGAAGAGTCTCCATTTTCATTCCATCCCCTCTTTATCAGGAGCACCACTTCTTCCTGTGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | ACTCTGATGAAGCCGTCCTGTTCTTCCTCAGAGGTCACGCATATCTaGTTCTCTTTCAGTGTTATCTGCCCCTGGTCCTTGCAGCCAATG | + |
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Preference number: 1 (lower is better) Translates to: TLMKPSCSSSEVTHI*FSFSVICPWSLQPM Trigger: CATTGGCTGCAAGGACCAGGGGCAGATAACACTGAAAGAGAACCAGATATGCGTGACCTCTGAGGAAGAACAGGACGGCTTCATCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | AGGTTGACCTTCTTGATTCTCTGCAGGAATCATGCTGAGGCTGATTaGCCAGCCCTGGGAACAGTTATCCAGAATCAGAGAAACTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: RLTFLILCRNHAEAD*PALGTVIQNQRNLA Trigger: AGCCAAGTTTCTCTGATTCTGGATAACTGTTCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAATCAAGAAGGTCAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR GCA 90 bp | GATTCTAAGTTGGCTACATTTATTCTAAGATGTTTTTCTCAGTGGTaGTCCCCTGTCCCTGGATCATCCTCCACAGGAAGAAGTGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: DSKLATFILRCFSQW*SPVPGSSSTGRSGA Trigger: AGCACCACTTCTTCCTGTGGAGGATGATCCAGGGACAGGGGAGCACCACTGAGAAAAACATCTTAGAATAAATGTAGCCAACTTAGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | GTTTGTGGTCTTCATTTGATCTCTGAAGTCATCCATACCGTTTTCTaGATATGTAAACACACTGTTGCTCCGTGTCCTCATGTCAGATCC | + |
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Preference number: 1 (lower is better) Translates to: VCGLHLISEVIHTVF*ICKHTVAPCPHVRS Trigger: GGATCTGACATGAGGACACGGAGCAACAGTGTGTTTACATATCCAGAAAACGGTATGGATGACTTCAGAGATCAAATGAAGACCACAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | CCTATAAATCTTCTCATGCTCTTCTACTCTCTGAACAAAGTTGGCTaGAAAGAAACCAACCCTGTCCTGAATCTTTCCTTTCCACCAGTC | + |
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Preference number: 1 (lower is better) Translates to: PINLLMLFYSLNKVG*KETNPVLNLSFPPV Trigger: GACTGGTGGAAAGGAAAGATTCAGGACAGGGTTGGTTTCTTTCCAGCCAACTTTGTTCAGAGAGTAGAAGAGCATGAGAAGATTTATAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR CCA 90 bp | CACACCTATAAATCTTCTCATGCTCTTCTACTCTCTGAACAAAGTTaGCTGGAAAGAAACCAACCCTGTCCTGAATCTTTCCTTTCCACC | + |
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Preference number: 1 (lower is better) Translates to: HTYKSSHALLLSEQS*LERNQPCPESFLST Trigger: GGTGGAAAGGAAAGATTCAGGACAGGGTTGGTTTCTTTCCAGCCAACTTTGTTCAGAGAGTAGAAGAGCATGAGAAGATTTATAGGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCGCCCTTCTTCGTTCTCTGGGCCAGGGACGTGCCGAACCGGAGGGCCTCAAGAGATCAGCAGCGCTaGCCTCCTGCTTGGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: EPPFFVLWARDVPNRRASRDQQR*PPAWEG Trigger: CCCTTCCCAAGCAGGAGGCCAGCGCTGCTGATCTCT...TGAGGCCCTCCGGTTCGGCACGTCCCTGGCCCAGAGAACGAAGAAGGGCGGCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR CAA 90 bp | CACTCCCGCTTCTCCTTGCTGCTGCTGGACTCTGTGCCTTGGACCTaGCCCTGCCACTTCGGAGCCACTGGAATAGCAAGGACGCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: HSRFSLLLLDSVPWT*PCHFGATGIARTPS Trigger: CGAGGGCGTCCTTGCTATTCCAGTGGCTCCGAAGTGGCAGGGCAAGGTCCAAGGCACAGAGTCCAGCAGCAGCAAGGAGAAGCGGGAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | GCTACAGCCCACTTACTGCCCCCGGCTCCCCTCAGCGCTGGGATGCTGCTCTCAAGCTGCTCCTCTGGGTaGACACAGAGAGATCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: ATAHLLPPAPLSAGMLLSSCSSG*TQRDQQ Trigger: CTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAGCT...TGAGAGCAGCATCCCAGCGCTGAGGGGAGCCGGGGGCAGTAAGTGGGCTGTAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR TCA 90 bp | CACAAACTGAGCAGGAGCTGGAGTGAACCCTGGGGTGTTGGGAGCCGGAAGGTTGAGCAGGAGCTGGAGTaGACCCTGGGGTGTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HKLSRSWSEPWGVGSRKVEQELE*TLGCWE Trigger: CTCCCAACACCCCAGGGTTCACTCCAGCTCCTGCTC...AACCTTCCGGCTCCCAACACCCCAGGGTTCACTCCAGCTCCTGCTCAGTTTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCATCTCCTGGCCCATCGGCCTCTTCAGGGACGTCTACAAGCTCTGAAGTCGTCTGGGCCAGGGACGTaGCGAACCGGAGGGCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: IHLLAHRPLQGRLQALKSSGPGT*RTGGPH Trigger: ATGAGGCCCTCCGGTTCGGCACGTCCCTGGCCCAGA...CGACTTCAGAGCTTGTAGACGTCCCTGAAGAGGCCGATGGGCCAGGAGATGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTGCTCCGTGTCCTCATGTCAGATCCATCTCCTGGCCCATCGGCCTCTTCAGTTGCCCATGCACCGCTaGGGCGCCAGGCCATCTGCA | + |
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Preference number: 2 (lower is better) Translates to: CCSVSSCQIHLLAHRPLQLPMHR*GARPSA Trigger: TGCAGATGGCCTGGCGCCCCAGCGGTGCATGGGCAA...CTGAAGAGGCCGATGGGCCAGGAGATGGATCTGACATGAGGACACGGAGCAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGAAGGGAGCTGAGTCCTGGGCAGCCTTAGCTACAGCCCACTTACTGCCCCACAGAGATGAAGCATaGCCCGGTCCGTTCCACTTC | + |
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Preference number: 2 (lower is better) Translates to: GRKGAESWAALATAHLLPHRDEA*PGPFHF Trigger: GAAGTGGAACGGACCGGGTCATGCTTCATCTCTGTG...GGGCAGTAAGTGGGCTGTAGCTAAGGCTGCCCAGGACTCAGCTCCCTTCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGTGGGCAGGAAGGGAGCTGAGTCCTGGGCAGCCTTAGCTACAGCCCACTTATCAGCGCTGGGATGCTaGTCTCAGGACGCCTTGATG | + |
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Preference number: 2 (lower is better) Translates to: QVGRKGAESWAALATAHLSALGC*SQDALM Trigger: CATCAAGGCGTCCTGAGAGCAGCATCCCAGCGCTGA...TAAGTGGGCTGTAGCTAAGGCTGCCCAGGACTCAGCTCCCTTCCTGCCCACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCAAGTCTCCCTGTTTTCTGGGCACCCATCCGTGCAGCTGCTCCTCTGGGAGAGATCAGCAGCGCTaGCCTCCTGCTTGGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LFKSPCFLGTHPCSCSSGRDQQR*PPAWEG Trigger: CCCTTCCCAAGCAGGAGGCCAGCGCTGCTGATCTCT...CCCAGAGGAGCAGCTGCACGGATGGGTGCCCAGAAAACAGGGAGACTTGAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTAGGACCACACCATGACCTGGAGCAGACTCCAGCCTTGCACAGGTGGGCACCAGCCTTGCACAGGTaGGCAGGAAGGGAGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SLGPHHDLEQTPALHRWAPALHR*AGRELS Trigger: ACTCAGCTCCCTTCCTGCCCACCTGTGCAAGGCTGG...TGCCCACCTGTGCAAGGCTGGAGTCTGCTCCAGGTCATGGTGTGGTCCTAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGAAGCAGGTCTGAATGCTGGGACGGGGCTTGGGAGGAAGGCATCGCAGTGGTGCTCCCCTGTCCCTaGATCATCCTCCACAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LGSRSECWDGAWEEGIAVVLPCP*IILHRK Trigger: CTTCCTGTGGAGGATGATCCAGGGACAGGGGAGCAC...CACTGCGATGCCTTCCTCCCAAGCCCCGTCCCAGCATTCAGACCTGCTTCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCAGTGGTGCTCCCCTGTCCCTGGATCATCCTCCACAGGAAGAAGTGGTGGAGCAGGAGCTGGAGTaGACCCTGGGGTGTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: FLSGAPLSLDHPPQEEVVEQELE*TLGCWE Trigger: CTCCCAACACCCCAGGGTTCACTCCAGCTCCTGCTC...CACCACTTCTTCCTGTGGAGGATGATCCAGGGACAGGGGAGCACCACTGAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCTACTCGGCAGCTCCAAACTTCTCACTAGGACCACACCATGACCTGGAGGCAGCGCTGGCCTCCTaGTTGGGAAGGGACTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: LGYSAAPNFSLGPHHDLEAALAS*LGRDCY Trigger: GTAGCAGTCCCTTCCCAAGCAGGAGGCCAGCGCTGC...CTCCAGGTCATGGTGTGGTCCTAGTGAGAAGTTTGGAGCTGCCGAGTAGCCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGGTGTTGGGAGCCGGAAGGTTGACCTTCTTGATTCTCTGCAGGAATCATGCCTGGGCACCCATCCGTaGAGCTGCTCCTCTGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: WGVGSRKVDLLDSLQESCLGTHP*SCSSGW Trigger: CCACCCAGAGGAGCAGCTGCACGGATGGGTGCCCAG...GCATGATTCCTGCAGAGAATCAAGAAGGTCAACCTTCCGGCTCCCAACACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGGAAGCAGGTCTGAATGCTGGGACGGGGCTTGGGAGGAAGGCATCGCAGTGATGCTGGTTCGGCCCTaGCTAGGATGTGCTGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LGSRSECWDGAWEEGIAVMLVRP*LGCAAE Trigger: TTCAGCAGCACATCCTAGGCAGGGCCGAACCAGCAT...CACTGCGATGCCTTCCTCCCAAGCCCCGTCCCAGCATTCAGACCTGCTTCCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | CACAAACTGAGCAGGAGCTGGAGTGAACCCTGGGGTGTTGGGAGCCGGAAGGTTACTCCCGCTTCTCCTTaGTGCTGCTGGACTCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: HKLSRSWSEPWGVGSRKVTPASP*CCWTLC Trigger: GCACAGAGTCCAGCAGCAGCAAGGAGAAGCGGGAGT...AACCTTCCGGCTCCCAACACCCCAGGGTTCACTCCAGCTCCTGCTCAGTTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTAGGACCACACCATGACCTGGAGCAGACTCCAGCCTTGCACAGGTGGGCAAAGGGAGCTGAGTCCTaGGCAGCCTTAGCTACAGCC | + |
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Preference number: 2 (lower is better) Translates to: SLGPHHDLEQTPALHRWAKGAES*AALATA Trigger: GGCTGTAGCTAAGGCTGCCCAGGACTCAGCTCCCTT...TGCCCACCTGTGCAAGGCTGGAGTCTGCTCCAGGTCATGGTGTGGTCCTAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | CACAAACTGAGCAGGAGCTGGAGTGAACCCTGGGGTGTTGGGAGCCGGAAGGTTGTCAGATCCATCTCCTaGCCCATCGGCCTCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: HKLSRSWSEPWGVGSRKVVRSIS*PIGLFR Trigger: CCTGAAGAGGCCGATGGGCCAGGAGATGGATCTGAC...AACCTTCCGGCTCCCAACACCCCAGGGTTCACTCCAGCTCCTGCTCAGTTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR CAA 90 bp | GCTGGAGTGAACCCTGGGGTGTTGGGAGCCGGAAGGTTGACCTTCTaGATTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: AGVNPGVLGAGRLTF*ILCRNHAEADWPAL Trigger: CAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAATCAAGAAGGTCAACCTTCCGGCTCCCAACACCCCAGGGTTCACTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR CAA 90 bp | CTCCTCTGGGTGGACACAGAGAGATCAGCAGCGCTGGCCTCCTGCTaGGGAAGGGACTGCTACAGTCACACGTCTACCAGTACATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LLWVDTERSAALASC*GRDCYSHTSTSTSS Trigger: ACTGGATGTACTGGTAGACGTGTGACTGTAGCAGTCCCTTCCCAAGCAGGAGGCCAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGCTACTCGGCAGCTCCAAACTTCTCACTAGGACCACACCATGACCTGGAGACCCATCCGTGCAGCTaGTCCTCTGGGTGGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: LGYSAAPNFSLGPHHDLETHPCS*SSGWTQ Trigger: CTGTGTCCACCCAGAGGAGCAGCTGCACGGATGGGT...CTCCAGGTCATGGTGTGGTCCTAGTGAGAAGTTTGGAGCTGCCGAGTAGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCACTAGGACCACACCATGACCTGGAGCAGACTCCAGCCTTGCACAGGTGGAAGGGAGCTGAGTCCTaGGCAGCCTTAGCTACAGCC | + |
|
Preference number: 2 (lower is better) Translates to: FSLGPHHDLEQTPALHRWKGAES*AALATA Trigger: GGCTGTAGCTAAGGCTGCCCAGGACTCAGCTCCCTT...CCACCTGTGCAAGGCTGGAGTCTGCTCCAGGTCATGGTGTGGTCCTAGTGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCCTCTGTTTGCACAGAGATGAAGCATGACCCGGTCCGTTCCACTTCACAGTGCTGGGACGGGGCTTaGGAGGAAGGCATCGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: ASSVCTEMKHDPVRSTSQCWDGA*EEGIAV Trigger: CACTGCGATGCCTTCCTCCCAAGCCCCGTCCCAGCA...CTGTGAAGTGGAACGGACCGGGTCATGCTTCATCTCTGTGCAAACAGAGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | GAGATGAAGCATGACCCGGTCCGTTCCACTTCACAGCTGCTGGAGCTGAAAACGCGCTGGCCTCCTGCTTaGGAAGGGACTGCTACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: EMKHDPVRSTSQLLELKTRWPPA*EGTATV Trigger: GACTGTAGCAGTCCCTTCCCAAGCAGGAGGCCAGCG...CGTTTTCAGCTCCAGCAGCTGTGAAGTGGAACGGACCGGGTCATGCTTCATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGGTGTTGGGAGCCGGAAGGTTGACCTTCTTGATTCTCTGCAGGAATCATGCACCCATCCGTGCAGCTaGTCCTCTGGGTGGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: WGVGSRKVDLLDSLQESCTHPCS*SSGWTQ Trigger: CTGTGTCCACCCAGAGGAGCAGCTGCACGGATGGGT...GCATGATTCCTGCAGAGAATCAAGAAGGTCAACCTTCCGGCTCCCAACACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCTACTCGGCAGCTCCAAACTTCTCACTAGGACCACACCATGACCTGGAGTCAGCGCTGGGATGCTaGTCTCAGGACGCCTTGATG | + |
|
Preference number: 2 (lower is better) Translates to: LGYSAAPNFSLGPHHDLESALGC*SQDALM Trigger: CATCAAGGCGTCCTGAGAGCAGCATCCCAGCGCTGA...CTCCAGGTCATGGTGTGGTCCTAGTGAGAAGTTTGGAGCTGCCGAGTAGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCTTCTTGATTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGAAGCAGACTCCAGCCTTaGACAGGTGGGCAGGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: TFLILCRNHAEADWPALGSRLQP*TGGQEG Trigger: CCCTTCCTGCCCACCTGTGCAAGGCTGGAGTCTGCT...TCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAATCAAGAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATCAGAGAAACTTGGCTACTCGGCAGCTCCAAACTTCTCACTAGGACCACACGCTCTCAGGACGCCTTaGTGTGCTGTGCAGTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: ESEKLGYSAAPNFSLGPHALRTP*CAVQWA Trigger: GGCCCACTGCACAGCACATCAAGGCGTCCTGAGAGC...GTGTGGTCCTAGTGAGAAGTTTGGAGCTGCCGAGTAGCCAAGTTTCTCTGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGAACAGTTATCCCGCCTTGATGTGCTGTaGAGTGGGCCTGCTTCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: FSAGIMLRLIGQPWEQLSRLDVL*SGPASR Trigger: TCTGGAAGCAGGCCCACTGCACAGCACATCAAGGCG...GGATAACTGTTCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTAGGACCACACCATGACCTGGAGCAGACTCCAGCCTTGCACAGGTGGGCAAGATGTTTTTCTCAGTaGTGCTCCCCTGTCCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SLGPHHDLEQTPALHRWARCFSQ*CSPVPG Trigger: TCCAGGGACAGGGGAGCACCACTGAGAAAAACATCT...TGCCCACCTGTGCAAGGCTGGAGTCTGCTCCAGGTCATGGTGTGGTCCTAGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCCTCCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGGGATGGAATGAAAATGGGCAGGAAGGGAGCTaGGTCCTGGGCAGCCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: HPPQEEVVLLIKRGWNENGQEGS*VLGSLS Trigger: GCTAAGGCTGCCCAGGACTCAGCTCCCTTCCTGCCC...ATTTTCATTCCATCCCCTCTTTATCAGGAGCACCACTTCTTCCTGTGGAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGTCTGAATGCTGGGACGGGGCTTGGGAGGAAGGCATCGCAGTGTGGTATGAAAGAGGGGATGGAATaGAAATGGAGACTCTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: AGLNAGTGLGRKASQCGMKEGME*KWRLFP Trigger: AGGGAAGAGTCTCCATTTTCATTCCATCCCCTCTTT...CATACCACACTGCGATGCCTTCCTCCCAAGCCCCGTCCCAGCATTCAGACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCTCAGGACGCCTTGATGTGCTGTGCAGTGGGCCTGCTTCCAGATTCCTACAAACTGTTCGTGAATaGGCAAGGGGGAGCTGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: LLSGRLDVLCSGPASRFLQTVRE*ARGSCS Trigger: ACTACAGCTCCCCCTTGCTCATTCACGAACAGTTTG...TAGGAATCTGGAAGCAGGCCCACTGCACAGCACATCAAGGCGTCCTGAGAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAAAGAACAATCCTGCCAGCCAAACTGAGACACAAACTGAGCAGGAGCTGGAGTGCTGCTGGACTCTGTaGCTTGGACCTTGCCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: RKNNPASQTETQTEQELECCWTL*LGPCPA Trigger: GGCAGGGCAAGGTCCAAGGCACAGAGTCCAGCAGCA...CTCCAGCTCCTGCTCAGTTTGTGTCTCAGTTTGGCTGGCAGGATTGTTCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTGTCCCTGGATCATCCTCCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGCTTCTCCTTGCTGCTaGTGGACTCTGTGCCTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SPVPGSSSTGRSGAPDKEASPCC*WTLCLG Trigger: TCCAAGGCACAGAGTCCAGCAGCAGCAAGGAGAAGC...CTCTTTATCAGGAGCACCACTTCTTCCTGTGGAGGATGATCCAGGGACAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGAACAGTTATCCCATCCAAACTGTTCGTaGATGAGCAAGGGGGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: FSAGIMLRLIGQPWEQLSHPNCS*MSKGEL Trigger: CAGCTCCCCCTTGCTCATTCACGAACAGTTTGGATG...GGATAACTGTTCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | GAATCAGAGAAACTTGGCTACTCGGCAGCTCCAAACTTCTCACTAGGACCACACCAGGACGCCTTGATGTaGTGTGCAGTGGGCCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: ESEKLGYSAAPNFSLGPHQDALM*CAVGLL Trigger: AAGCAGGCCCACTGCACAGCACATCAAGGCGTCCTG...GTGTGGTCCTAGTGAGAAGTTTGGAGCTGCCGAGTAGCCAAGTTTCTCTGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTGGGAGGAAGGCATCGCAGTGTGGTATGTTCTTGTAAACATCGGTACAGGTCCCGCTTCTCCTTGCTaGTGCTGGACTCTGTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: AWEEGIAVWYVLVNIGTGPASPC*CWTLCL Trigger: AAGGCACAGAGTCCAGCAGCAGCAAGGAGAAGCGGG...ACCTGTACCGATGTTTACAAGAACATACCACACTGCGATGCCTTCCTCCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTGGGAGGAAGGCATCGCAGTGTGGTATGTTCTTGTAAACATCGGTACAGGTGTGAGTCAGAACCACTaGCTGAGCCGCCCTTCTTCG | + |
|
Preference number: 2 (lower is better) Translates to: AWEEGIAVWYVLVNIGTGVSQNH*LSRPSS Trigger: CGAAGAAGGGCGGCTCAGGCAGTGGTTCTGACTCAC...ACCTGTACCGATGTTTACAAGAACATACCACACTGCGATGCCTTCCTCCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGGATGTGCTGCTGAAGAGAAAGAAAGAACAATCCTGCCAGCCAAACTGAGAAGCAGACTCCAGCCTTaGACAGGTGGGCAGGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LGCAAEEKERTILPAKLRSRLQP*TGGQEG Trigger: CCCTTCCTGCCCACCTGTGCAAGGCTGGAGTCTGCT...TCTCAGTTTGGCTGGCAGGATTGTTCTTTCTTTCTCTTCAGCAGCACATCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | CCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGGGATGGAATGAAAATGGAGACACTCCCGCTTCTCCTTaGTGCTGCTGGACTCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: PQEEVVLLIKRGWNENGDTPASP*CCWTLC Trigger: GCACAGAGTCCAGCAGCAGCAAGGAGAAGCGGGAGT...GTCTCCATTTTCATTCCATCCCCTCTTTATCAGGAGCACCACTTCTTCCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTCTGAATGCTGGGACGGGGCTTGGGAGGAAGGCATCGCAGTGTGGTATGTGCCCTAGAGAAGAATaGATTCTAAGTTGGCTACAT | + |
|
Preference number: 2 (lower is better) Translates to: AGLNAGTGLGRKASQCGMCPREE*ILSWLH Trigger: ATGTAGCCAACTTAGAATCCATTCTTCTCTAGGGCA...CATACCACACTGCGATGCCTTCCTCCCAAGCCCCGTCCCAGCATTCAGACCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | TTATCCAGAATCAGAGAAACTTGGCTACTCGGCAGCTCCAAACTTCTCACTAGGCGCCTTGATGTGCTGTaGAGTGGGCCTGCTTCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSRIRETWLLGSSKLLTRRLDVL*SGPASR Trigger: TCTGGAAGCAGGCCCACTGCACAGCACATCAAGGCG...CCTAGTGAGAAGTTTGGAGCTGCCGAGTAGCCAAGTTTCTCTGATTCTGGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGGCTACATTTATTCTAAGATGTTTTTCTCAGTGGTGCTCCCCTGTCCCTGGCAGGACGCCTTGATGTaGTGTGCAGTGGGCCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: VGYIYSKMFFSVVLPCPWQDALM*CAVGLL Trigger: AAGCAGGCCCACTGCACAGCACATCAAGGCGTCCTG...CCAGGGACAGGGGAGCACCACTGAGAAAAACATCTTAGAATAAATGTAGCCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | CAACGTAGGTGTTCATCTGTAATGGGTCTTTGGAAAGAGGTCCCTGGTGGTTTGAGCTGCTCCTCTGGGTaGACACAGAGAGATCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QRRCSSVMGLWKEVPGGLSCSSG*TQRDQQ Trigger: CTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAGCT...CAAACCACCAGGGACCTCTTTCCAAAGACCCATTACAGATGAACACCTACGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGGGATGGAATGAAAATGGAGACAGTCTCCCTGTTTTCTaGGCACCCATCCGTGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PQEEVVLLIKRGWNENGDSLPVF*APIRAA Trigger: AGCTGCACGGATGGGTGCCCAGAAAACAGGGAGACT...GTCTCCATTTTCATTCCATCCCCTCTTTATCAGGAGCACCACTTCTTCCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | CTGATTGGCCAGCCCTGGGAACAGTTATCCAGAATCAGAGAAACTTGGCTACTCAGATGTTTTTCTCAGTaGTGCTCCCCTGTCCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LIGQPWEQLSRIRETWLLRCFSQ*CSPVPG Trigger: TCCAGGGACAGGGGAGCACCACTGAGAAAAACATCT...GAGTAGCCAAGTTTCTCTGATTCTGGATAACTGTTCCCAGGGCTGGCCAATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTCTTGATTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGACTGAACAAAGTTGGCTaGAAAGAAACCAACCCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: TFLILCRNHAEADWPALGLNKVG*KETNPV Trigger: GACAGGGTTGGTTTCTTTCCAGCCAACTTTGTTCAG...TCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAATCAAGAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTGAGGCTGATTGGCCAGCCCTGGGAACAGTTATCCAGAATCAGAGAAACTAAACCAACCCTGTCCTaGATCTTTCCTTTCCACCAG | + |
|
Preference number: 2 (lower is better) Translates to: MLRLIGQPWEQLSRIRETKPTLS*IFPFHQ Trigger: CTGGTGGAAAGGAAAGATTCAGGACAGGGTTGGTTT...AGTTTCTCTGATTCTGGATAACTGTTCCCAGGGCTGGCCAATCAGCCTCAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTATAAATCTTCTCATGCTCTTCTACTCTCTGAACAAAGTTGGCTGGAAAGAGCAGCGCTGGCCTCCTaGTTGGGAAGGGACTGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: TYKSSHALLLSEQSWLERAALAS*LGRDCY Trigger: GTAGCAGTCCCTTCCCAAGCAGGAGGCCAGCGCTGC...TCTTTCCAGCCAACTTTGTTCAGAGAGTAGAAGAGCATGAGAAGATTTATAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTGATTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGAACAACCTTCTTGATTCTCTaGAGGAATCATGCTGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FLILCRNHAEADWPALGTTFLIL*RNHAEA Trigger: AGCCTCAGCATGATTCCTGCAGAGAATCAAGAAGGT...TGTTCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAATCAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | CATCCTCCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGGGATGGAATGAAAATTCTTTCAGTGTTATCTaGCCCTGGTCCTTGCAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: HPPQEEVVLLIKRGWNENSFSVI*PWSLQP Trigger: TGGCTGCAAGGACCAGGGGCAGATAACACTGAAAGA...ATTTTCATTCCATCCCCTCTTTATCAGGAGCACCACTTCTTCCTGTGGAGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR-3UTR CCA 90 bp | GGATGTGCTGCTGAAGAGAAAGAAAGAACAATCCTGCCAGCCAAACTGAGACACTCTGTAATGGGTCTTTaGAAAGAGGTCCCTGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: GCAAEEKERTILPAKLRHSVMGL*KEVPGG Trigger: ACCACCAGGGACCTCTTTCCAAAGACCCATTACAGA...GTGTCTCAGTTTGGCTGGCAGGATTGTTCTTTCTTTCTCTTCAGCAGCACATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| 3UTR-3UTR CCA 90 bp | TTGATTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGAACAGTTCTGATAAAGAGGGGATaGAATGAAAATGGAGACTCT | + |
|
Preference number: 2 (lower is better) Translates to: LILCRNHAEADWPALGTVLIKRG*NENGDS Trigger: AGAGTCTCCATTTTCATTCCATCCCCTCTTTATCAG...AACTGTTCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR-3UTR GCA 90 bp | CATCCTCCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGGGATGGAATGAAAATACCTTCTTGATTCTCTaGAGGAATCATGCTGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HPPQEEVVLLIKRGWNENTFLIL*RNHAEA Trigger: AGCCTCAGCATGATTCCTGCAGAGAATCAAGAAGGT...ATTTTCATTCCATCCCCTCTTTATCAGGAGCACCACTTCTTCCTGTGGAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR GCA 72 bp | ACTTACTGCCCCCGGCTCCCCTCAGCGCTGGGATGCTaGTCTCAGGACGCCTTGATGTGCTGTGCAGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TYCPRLPSALGC*SQDALMCCAVG Trigger: GCCCACTGCACAGCACATCAAGGCGTCCTGAGAGCAGCATCCCAGCGCTGAGGGGAGCCGGGGGCAGTAAGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| 3UTR GCA 72 bp | CTGAGCCGCCCTTCTTCGTTCTCTGGGCCAGGGACGTaGCGAACCGGAGGGCCTCATACACGGGGTCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LSRPSSFSGPGT*RTGGPHTRGPL Trigger: AAGTGGACCCCGTGTATGAGGCCCTCCGGTTCGGCACGTCCCTGGCCCAGAGAACGAAGAAGGGCGGCTCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR GCA 72 bp | CCCACTCCCGCTTCTCCTTGCTGCTGCTGGACTCTGTaGCTTGGACCTTGCCCTGCCACTTCGGAGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: PTPASPCCCWTL*LGPCPATSEPL Trigger: CAGTGGCTCCGAAGTGGCAGGGCAAGGTCCAAGGCACAGAGTCCAGCAGCAGCAAGGAGAAGCGGGAGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGAAGGGAGCTGAGTCCTGGGCAGCCTTAGCTACAGCCCACTTACTGCCCCACTCCCGCTTCTCCTaGCTGCTGCTGGACTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GRKGAESWAALATAHLLPHSRFS*LLLDSV Trigger: CACAGAGTCCAGCAGCAGCAAGGAGAAGCGGGAGTG...GGGCAGTAAGTGGGCTGTAGCTAAGGCTGCCCAGGACTCAGCTCCCTTCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR GCA 72 bp | CTGAAGTCGAGGTTCTGGGCGGTGAGTCAGAACCACTaGCTGAGCCGCCCTTCTTCGTTCTCTGGGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LKSRFWAVSQNH*LSRPSSFSGPG Trigger: CCCTGGCCCAGAGAACGAAGAAGGGCGGCTCAGGCAGTGGTTCTGACTCACCGCCCAGAACCTCGACTTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR CCA 72 bp | CTGTTTTCTGGGCACCCATCCGTGCAGCTGCTCCTCTaGGTGGACACAGAGAGATCAGCAGCGCTGGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LFSGHPSVQLLL*VDTERSAALAS Trigger: GGAGGCCAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAGCTGCACGGATGGGTGCCCAGAAAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCATCCGTGCAGCTGCTCCTCTGGGTGGACACAGAGAGATCAGCAGCGCTGATAAGGGCTCCTTCCTaGTCCCCACTCCCGCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HPSVQLLLWVDTERSAALIRAPS*SPLPLL Trigger: GAGAAGCGGGAGTGGGGACAAGGAAGGAGCCCTTAT...CAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAGCTGCACGGATGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR GCA 72 bp | AAGGGCTCCTTCCTTGTCCCCACTCCCGCTTCTCCTTaGTGCTGCTGGACTCTGTGCCTTGGACCTTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KGSFLVPTPASP*CCWTLCLGPCP Trigger: AGGGCAAGGTCCAAGGCACAGAGTCCAGCAGCAGCAAGGAGAAGCGGGAGTGGGGACAAGGAAGGAGCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAAACTGAGCAGGAGCTGGAGTGAACCCTGGGGTGTTGGGAGCCGGAAGGTTGCTGGACTCTGTGCCTaGGACCTTGCCCTGCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: HKLSRSWSEPWGVGSRKVAGLCA*DLALPL Trigger: AAGTGGCAGGGCAAGGTCCAAGGCACAGAGTCCAGC...AACCTTCCGGCTCCCAACACCCCAGGGTTCACTCCAGCTCCTGCTCAGTTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGAAGCAGGTCTGAATGCTGGGACGGGGCTTGGGAGGAAGGCATCGCAGTGATAAGGGCTCCTTCCTaGTCCCCACTCCCGCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LGSRSECWDGAWEEGIAVIRAPS*SPLPLL Trigger: GAGAAGCGGGAGTGGGGACAAGGAAGGAGCCCTTAT...CACTGCGATGCCTTCCTCCCAAGCCCCGTCCCAGCATTCAGACCTGCTTCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTCAAGTCTCCCTGTTTTCTGGGCACCCATCCGTGCAGCTGCTCCTCTGGGAATCCCTTTGGCAACTaGCCCATGCACCGCTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LFKSPCFLGTHPCSCSSGNPFGN*PMHRWG Trigger: GCCCCAGCGGTGCATGGGCAAGTTGCCAAAGGGATT...CCCAGAGGAGCAGCTGCACGGATGGGTGCCCAGAAAACAGGGAGACTTGAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR TCA 72 bp | CTCGGCAGCTCCAAACTTCTCACTAGGACCACACCATaGCCTGGAGCAGACTCCAGCCTTGCACAGGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LGSSKLLTRTTP*PGADSSLAQVG Trigger: GCCCACCTGTGCAAGGCTGGAGTCTGCTCCAGGTCATGGTGTGGTCCTAGTGAGAAGTTTGGAGCTGCCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR GCA 72 bp | AAGTCTCCCTGTTTTCTGGGCACCCATCCGTGCAGCTaGTCCTCTGGGTGGACACAGAGAGATCAGCAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: KSPCFLGTHPCS*SSGWTQRDQQR Trigger: GCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAGCTGCACGGATGGGTGCCCAGAAAACAGGGAGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR CCA 72 bp | TGCTCCTCTGGGTGGACACAGAGAGATCAGCAGCGCTaGCCTCCTGCTTGGGAAGGGACTGCTACAGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: CSSGWTQRDQQR*PPAWEGTATVT Trigger: TGTGACTGTAGCAGTCCCTTCCCAAGCAGGAGGCCAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR GCA 72 bp | AGATCAGCAGCGCTGGCCTCCTGCTTGGGAAGGGACTaGTACAGTCACACGTCTACCAGTACATCCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RSAALASCLGRD*YSHTSTSTSSG Trigger: CCCACTGGATGTACTGGTAGACGTGTGACTGTAGCAGTCCCTTCCCAAGCAGGAGGCCAGCGCTGCTGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR CCA 72 bp | CTGCCAGCCAAACTGAGACACAAACTGAGCAGGAGCTaGAGTGAACCCTGGGGTGTTGGGAGCCGGAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LPAKLRHKLSRS*SEPWGVGSRKV Trigger: AACCTTCCGGCTCCCAACACCCCAGGGTTCACTCCAGCTCCTGCTCAGTTTGTGTCTCAGTTTGGCTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGAACAGTTATCCTGCTCTCAGGACGCCTaGATGTGCTGTGCAGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: FSAGIMLRLIGQPWEQLSCSQDA*MCCAVG Trigger: GCCCACTGCACAGCACATCAAGGCGTCCTGAGAGCA...GGATAACTGTTCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR TCA 72 bp | AGCCCCAGCTTCCTCTGTTTGCACAGAGATGAAGCATaGCCCGGTCCGTTCCACTTCACAGCTGCTGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SPSFLCLHRDEA*PGPFHFTAAGA Trigger: AGCTCCAGCAGCTGTGAAGTGGAACGGACCGGGTCATGCTTCATCTCTGTGCAAACAGAGGAAGCTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR GCA 72 bp | CTCTTCAAGTCTCCCTGTTTTCTGGGCACCCATCCGTaGAGCTGCTCCTCTGGGTGGACACAGAGAGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: LFKSPCFLGTHP*SCSSGWTQRDQ Trigger: CTGATCTCTCTGTGTCCACCCAGAGGAGCAGCTGCACGGATGGGTGCCCAGAAAACAGGGAGACTTGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR CCA 72 bp | TGGACACAGAGAGATCAGCAGCGCTGGCCTCCTGCTTaGGAAGGGACTGCTACAGTCACACGTCTACCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: WTQRDQQRWPPA*EGTATVTRLPV Trigger: TACTGGTAGACGTGTGACTGTAGCAGTCCCTTCCCAAGCAGGAGGCCAGCGCTGCTGATCTCTCTGTGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGAACAATCCTGCCAGCCAAACTGAGACACAAACTGAGCAGGAGCTGGAGTCTGTGCCTTGGACCTaGCCCTGCCACTTCGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RKNNPASQTETQTEQELESVPWT*PCHFGA Trigger: GGCTCCGAAGTGGCAGGGCAAGGTCCAAGGCACAGA...CTCCAGCTCCTGCTCAGTTTGTGTCTCAGTTTGGCTGGCAGGATTGTTCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR CCA 72 bp | GGACTGCTACAGTCACACGTCTACCAGTACATCCAGTaGGACGAGGCCTCTCTTCTTCCCACTGAGGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: GLLQSHVYQYIQ*DEASLLPTEDS Trigger: AGAGTCCTCAGTGGGAAGAAGAGAGGCCTCGTCCCACTGGATGTACTGGTAGACGTGTGACTGTAGCAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGATTGGCCAGCCCTGGGAACAGTTATCCAGAATCAGAGAAACTTGGCTACTCGCTGGACTCTGTGCCTaGGACCTTGCCCTGCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LIGQPWEQLSRIRETWLLAGLCA*DLALPL Trigger: AAGTGGCAGGGCAAGGTCCAAGGCACAGAGTCCAGC...GAGTAGCCAAGTTTCTCTGATTCTGGATAACTGTTCCCAGGGCTGGCCAATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAAACTGAGCAGGAGCTGGAGTGAACCCTGGGGTGTTGGGAGCCGGAAGGTTTTCCACCAGTCTTCATaGGAGTCTTCTAGGAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HKLSRSWSEPWGVGSRKVFHQSS*ESSRRV Trigger: CACTCTCCTAGAAGACTCCAATGAAGACTGGTGGAA...AACCTTCCGGCTCCCAACACCCCAGGGTTCACTCCAGCTCCTGCTCAGTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR TCA 72 bp | CATTTAAACATGTCAGTGACTGCTAGGAAGCAGGTCTaGATGCTGGGACGGGGCTTGGGAGGAAGGCATCGC | + |
|
Preference number: 3 (lower is better) Translates to: HLNMSVTARKQV*MLGRGLGGRHR Trigger: GCGATGCCTTCCTCCCAAGCCCCGTCCCAGCATTCAGACCTGCTTCCTAGCAGTCACTGACATGTTTAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR CCA 72 bp | TGCTGGGACGGGGCTTGGGAGGAAGGCATCGCAGTGTaGTATGTTCTTGTAAACATCGGTACAGGTAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CWDGAWEEGIAV*YVLVNIGTGRE Trigger: CTCTCTACCTGTACCGATGTTTACAAGAACATACCACACTGCGATGCCTTCCTCCCAAGCCCCGTCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCTCTGTTTGCACAGAGATGAAGCATGACCCGGTCCGTTCCACTTCACAGTTGGGAGCCGGAAGGTaGACCTTCTTGATTCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ASSVCTEMKHDPVRSTSQLGAGR*TFLILC Trigger: GCAGAGAATCAAGAAGGTCAACCTTCCGGCTCCCAA...CTGTGAAGTGGAACGGACCGGGTCATGCTTCATCTCTGTGCAAACAGAGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGATGTGCTGCTGAAGAGAAAGAAAGAACAATCCTGCCAGCCAAACTGAGAGTGAACCCTGGGGTGTaGGGAGCCGGAAGGTTGACC | + |
|
Preference number: 3 (lower is better) Translates to: LGCAAEEKERTILPAKLRVNPGV*GAGRLT Trigger: GGTCAACCTTCCGGCTCCCAACACCCCAGGGTTCAC...TCTCAGTTTGGCTGGCAGGATTGTTCTTTCTTTCTCTTCAGCAGCACATCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGATGTGCTGCTGAAGAGAAAGAAAGAACAATCCTGCCAGCCAAACTGAGAATGCTGGGACGGGGCTaGGGAGGAAGGCATCGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LGCAAEEKERTILPAKLRMLGRG*GGRHRS Trigger: ACTGCGATGCCTTCCTCCCAAGCCCCGTCCCAGCAT...TCTCAGTTTGGCTGGCAGGATTGTTCTTTCTTTCTCTTCAGCAGCACATCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGAAGGGAGCTGAGTCCTGGGCAGCCTTAGCTACAGCCCACTTACTGCCCGTTTGTGGTCTTCATTaGATCTCTGAAGTCATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GRKGAESWAALATAHLLPVCGLH*ISEVIH Trigger: ATGGATGACTTCAGAGATCAAATGAAGACCACAAAC...GGGCAGTAAGTGGGCTGTAGCTAAGGCTGCCCAGGACTCAGCTCCCTTCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGATTGGCCAGCCCTGGGAACAGTTATCCAGAATCAGAGAAACTTGGCTACTCATCTGCCCCTGGTCCTaGCAGCCAATGAAGGTTCGA | + |
|
Preference number: 3 (lower is better) Translates to: LIGQPWEQLSRIRETWLLICPWS*QPMKVR Trigger: TCGAACCTTCATTGGCTGCAAGGACCAGGGGCAGAT...GAGTAGCCAAGTTTCTCTGATTCTGGATAACTGTTCCCAGGGCTGGCCAATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR GCA 72 bp | CGGATCTTTGCACTTGGTACCATGCTGGTTCGGCCCTaGCTAGGATGTGCTGCTGAAGAGAAAGAAAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: RIFALGTMLVRP*LGCAAEEKERT Trigger: TGTTCTTTCTTTCTCTTCAGCAGCACATCCTAGGCAGGGCCGAACCAGCATGGTACCAAGTGCAAAGATCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR CCA 72 bp | CAGCCCTGGGAACAGTTATCCAGAATCAGAGAAACTTaGCTACTCGGCAGCTCCAAACTTCTCACTAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: QPWEQLSRIRET*LLGSSKLLTRT Trigger: GGTCCTAGTGAGAAGTTTGGAGCTGCCGAGTAGCCAAGTTTCTCTGATTCTGGATAACTGTTCCCAGGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR CCA 72 bp | AAGCCGTCCTGTTCTTCCTCAGAGGTCACGCATATCTaGTTCTCTTTCAGTGTTATCTGCCCCTGGTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KPSCSSSEVTHI*FSFSVICPWSL Trigger: CAAGGACCAGGGGCAGATAACACTGAAAGAGAACCAGATATGCGTGACCTCTGAGGAAGAACAGGACGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR TCA 72 bp | ATGACCCGGTCCGTTCCACTTCACAGCTGCTGGAGCTaGAAACGTTGCCCTAGAGAAGAATGGATTCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: MTRSVPLHSCWS*KRCPREEWILS Trigger: ACTTAGAATCCATTCTTCTCTAGGGCAACGTTTTCAGCTCCAGCAGCTGTGAAGTGGAACGGACCGGGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR CCA 72 bp | ACGCATATCTGGTTCTCTTTCAGTGTTATCTGCCCCTaGTCCTTGCAGCCAATGAAGGTTCGAACACACCTA | + |
|
Preference number: 3 (lower is better) Translates to: THIWFSFSVICP*SLQPMKVRTHL Trigger: TAGGTGTGTTCGAACCTTCATTGGCTGCAAGGACCAGGGGCAGATAACACTGAAAGAGAACCAGATATGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCCTCCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGGGATGGAATGAAAATCAGAATCAGAGAAACTaGGCTACTCGGCAGCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HPPQEEVVLLIKRGWNENQNQRN*ATRQLQ Trigger: TTGGAGCTGCCGAGTAGCCAAGTTTCTCTGATTCTG...ATTTTCATTCCATCCCCTCTTTATCAGGAGCACCACTTCTTCCTGTGGAGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGAGGCTGATTGGCCAGCCCTGGGAACAGTTATCCAGAATCAGAGAAACTGGAAGGTTGACCTTCTaGATTCTCTGCAGGAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: MLRLIGQPWEQLSRIRETGRLTF*ILCRNH Trigger: ATGATTCCTGCAGAGAATCAAGAAGGTCAACCTTCC...AGTTTCTCTGATTCTGGATAACTGTTCCCAGGGCTGGCCAATCAGCCTCAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR GCA 72 bp | TTGGCTACATTTATTCTAAGATGTTTTTCTCAGTGGTaGTCCCCTGTCCCTGGATCATCCTCCACAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LATFILRCFSQW*SPVPGSSSTGR Trigger: TCTTCCTGTGGAGGATGATCCAGGGACAGGGGAGCACCACTGAGAAAAACATCTTAGAATAAATGTAGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR CCA 72 bp | AAGTTGGCTACATTTATTCTAAGATGTTTTTCTCAGTaGTGCTCCCCTGTCCCTGGATCATCCTCCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KLATFILRCFSQ*CSPVPGSSSTG Trigger: TCCTGTGGAGGATGATCCAGGGACAGGGGAGCACCACTGAGAAAAACATCTTAGAATAAATGTAGCCAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR CCA 72 bp | ACAAGGCAACGTAGGTGTTCATCTGTAATGGGTCTTTaGAAAGAGGTCCCTGGTGGTTTGTGGTCTTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: TRQRRCSSVMGL*KEVPGGLWSSF Trigger: AAATGAAGACCACAAACCACCAGGGACCTCTTTCCAAAGACCCATTACAGATGAACACCTACGTTGCCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR CCA 72 bp | CTTCTCATGCTCTTCTACTCTCTGAACAAAGTTGGCTaGAAAGAAACCAACCCTGTCCTGAATCTTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLMLFYSLNKVG*KETNPVLNLSF Trigger: AAAGGAAAGATTCAGGACAGGGTTGGTTTCTTTCCAGCCAACTTTGTTCAGAGAGTAGAAGAGCATGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR CCA 72 bp | CTTCATTTGATCTCTGAAGTCATCCATACCGTTTTCTaGATATGTAAACACACTGTTGCTCCGTGTCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LHLISEVIHTVF*ICKHTVAPCPH Trigger: ATGAGGACACGGAGCAACAGTGTGTTTACATATCCAGAAAACGGTATGGATGACTTCAGAGATCAAATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCTATAAATCTTCTCATGCTCTTCTACTCTCTGAACAAAGTTGGCTGGAAAGATATGTAAACACACTGTaGCTCCGTGTCCTCATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TYKSSHALLLSEQSWLERYVNTL*LRVLMS Trigger: TGACATGAGGACACGGAGCAACAGTGTGTTTACATA...TCTTTCCAGCCAACTTTGTTCAGAGAGTAGAAGAGCATGAGAAGATTTATAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| CDS-3UTR GCA 90 bp | GCTACAGCCCACTTACTGCCCCCGGCTCCCCTCAGCGCTGGGATGCTGCTCTCAAGGGCGGCTGCTCTGTaGCCGTTGCCTCCCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ATAHLLPPAPLSAGMLLSRAAAL*PLPPRS Trigger: TGACCGGGGAGGCAACGGGCACAGAGCAGCCGCCCT...TGAGAGCAGCATCCCAGCGCTGAGGGGAGCCGGGGGCAGTAAGTGGGCTGTAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| CDS-3UTR CCA 90 bp | TCACTAGGACCACACCATGACCTGGAGCAGACTCCAGCCTTGCACAGGTGGGCAGGCTGGGGCCTGGGCTaGCCTTGGCCAGCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLGPHHDLEQTPALHRWAGWGLG*PWPAGL Trigger: CAGACCTGCTGGCCAAGGCCAGCCCAGGCCCCAGCC...TGCCCACCTGTGCAAGGCTGGAGTCTGCTCCAGGTCATGGTGTGGTCCTAGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGAAGGGAGCTGAGTCCTGGGCAGCCTTAGCTACAGCCCACTTACTGCCCGCAGGCCAGCCTTGGTaGGCATGGACGCTGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRKGAESWAALATAHLLPAGQPW*AWTLGF Trigger: GAAGCCCAGCGTCCATGCCCACCAAGGCTGGCCTGC...GGGCAGTAAGTGGGCTGTAGCTAAGGCTGCCCAGGACTCAGCTCCCTTCCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCCTCTGGGTGGACACAGAGAGATCAGCAGCGCTGGCCTCCTGCTTGGGAATTCCAGGCTGCTGGTaGACGCAGGAGAGGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLWVDTERSAALASCLGIPGCW*TQERAA Trigger: AGCCGCCCTCTCCTGCGTCCACCAGCAGCCTGGAAT...TCCCAAGCAGGAGGCCAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| CDS-3UTR GCA 90 bp | CACCCATCCGTGCAGCTGCTCCTCTGGGTGGACACAGAGAGATCAGCAGCGCTGCCGCAGCGCAGTCCGTaGTTAGCATGTGTTCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: HPSVQLLLWVDTERSAALPQRSP*LACVPT Trigger: CGTGGGAACACATGCTAAGCACGGACTGCGCTGCGG...CAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAGCTGCACGGATGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| 3UTR CAA 72 bp | CTCCCCTCAGCGCTGGGATGCTGCTCTCAGGACGCCTaGATGTGCTGTGCAGTGGGCCTGCTTCCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSALGCCSQDA*MCCAVGLLPDS Trigger: GGAATCTGGAAGCAGGCCCACTGCACAGCACATCAAGGCGTCCTGAGAGCAGCATCCCAGCGCTGAGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| CDS-3UTR GCA 90 bp | GTACAGGTAGAGAGCAATATCCCCAGGTGGTGTGAGCTAAGCCCCAGCTTCCTCAGGGCGGCTGCTCTGTaGCCGTTGCCTCCCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQVESNIPRWCELSPSFLRAAAL*PLPPRS Trigger: TGACCGGGGAGGCAACGGGCACAGAGCAGCCGCCCT...GAGGAAGCTGGGGCTTAGCTCACACCACCTGGGGATATTGCTCTCTACCTGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGCTACTCGGCAGCTCCAAACTTCTCACTAGGACCACACCATGACCTGGAGTTGCCCATGCACCGCTaGGGCGCCAGGCCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGYSAAPNFSLGPHHDLELPMHR*GARPSA Trigger: TGCAGATGGCCTGGCGCCCCAGCGGTGCATGGGCAA...CTCCAGGTCATGGTGTGGTCCTAGTGAGAAGTTTGGAGCTGCCGAGTAGCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR GCA 90 bp | TCCCCTGTCCCTGGATCATCCTCCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGGAGCTTGCTGTTGCTaGCGGGGTGCAGGCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPVPGSSSTGRSGAPDKEGACCC*RGAGQP Trigger: AGGCTGGCCTGCACCCCGGCAGCAACAGCAAGCTCC...CTCTTTATCAGGAGCACCACTTCTTCCTGTGGAGGATGATCCAGGGACAGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR GCA 90 bp | CACAAACTGAGCAGGAGCTGGAGTGAACCCTGGGGTGTTGGGAGCCGGAAGGTTGTGAGTCAGAACCACTaGCTGAGCCGCCCTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HKLSRSWSEPWGVGSRKVVSQNH*LSRPSS Trigger: CGAAGAAGGGCGGCTCAGGCAGTGGTTCTGACTCAC...AACCTTCCGGCTCCCAACACCCCAGGGTTCACTCCAGCTCCTGCTCAGTTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGTGTTGGGAGCCGGAAGGTTGACCTTCTTGATTCTCTGCAGGAATCATGCTATTGGGCTGGGGCCTaGGCTGGCCTTGGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WGVGSRKVDLLDSLQESCYWAGA*AGLGQQ Trigger: CTGCTGGCCAAGGCCAGCCCAGGCCCCAGCCCAATA...GCATGATTCCTGCAGAGAATCAAGAAGGTCAACCTTCCGGCTCCCAACACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGAACAGTTATCCAGAATCGGATGGCTATTGGGCTaGGGCCTGGGCTGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGIMLRLIGQPWEQLSRIGWLLG*GLGWPW Trigger: CCAAGGCCAGCCCAGGCCCCAGCCCAATAGCCATCC...GATTCTGGATAACTGTTCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAACCCTGGGGTGTTGGGAGCCGGAAGGTTGACCTTCTTGATTCTCTGCAGCTGGGCTTCCAGGGATaGCTATTGGGCTGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEPWGVGSRKVDLLDSLQLGFQG*LLGWGL Trigger: CAGGCCCCAGCCCAATAGCCATCCCTGGAAGCCCAG...CTGCAGAGAATCAAGAAGGTCAACCTTCCGGCTCCCAACACCCCAGGGTTCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGAACAGTTATCCAGAATCTGGATTCCAGGCTGCTaGTGGACGCAGGAGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AGIMLRLIGQPWEQLSRIWIPGC*WTQERA Trigger: CGCCCTCTCCTGCGTCCACCAGCAGCCTGGAATCCA...GATTCTGGATAACTGTTCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTTGATTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGATGGATTCCAGGCTGCTaGTGGACGCAGGAGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TFLILCRNHAEADWPALGWIPGC*WTQERA Trigger: CGCCCTCTCCTGCGTCCACCAGCAGCCTGGAATCCA...TCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAATCAAGAAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR CAA 72 bp | AGGGCTGTCCGATCCCAATACATAAGGGCTCCTTCCTaGTCCCCACTCCCGCTTCTCCTTGCTGCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RAVRSQYIRAPS*SPLPLLLAAAG Trigger: TCCAGCAGCAGCAAGGAGAAGCGGGAGTGGGGACAAGGAAGGAGCCCTTATGTATTGGGATCGGACAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| 3UTR CAA 72 bp | GTGGACACAGAGAGATCAGCAGCGCTGGCCTCCTGCTaGGGAAGGGACTGCTACAGTCACACGTCTACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VDTERSAALASC*GRDCYSHTSTS Trigger: ACTGGTAGACGTGTGACTGTAGCAGTCCCTTCCCAAGCAGGAGGCCAGCGCTGCTGATCTCTCTGTGTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCCTCTGTTTGCACAGAGATGAAGCATGACCCGGTCCGTTCCACTTCACAGGGGCGCCAGGCCATCTaGACACTTGTGGTGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSVCTEMKHDPVRSTSQGRQAI*TLVVDA Trigger: AGCATCCACCACAAGTGTGCAGATGGCCTGGCGCCC...CTGTGAAGTGGAACGGACCGGGTCATGCTTCATCTCTGTGCAAACAGAGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGGGATGGAATGAAAATGGAGACGGTGCAGGCCAGCCTTaGTGGGCATGGACGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQEEVVLLIKRGWNENGDGAGQP*WAWTLG Trigger: GCCCAGCGTCCATGCCCACCAAGGCTGGCCTGCACC...GTCTCCATTTTCATTCCATCCCCTCTTTATCAGGAGCACCACTTCTTCCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCCTCTGGGTGGACACAGAGAGATCAGCAGCGCTGGCCTCCTGCTTGGGATCTGCACACTTGTGGTaGATGCTCATCTTACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLWVDTERSAALASCLGSAHLW*MLILQA Trigger: AGCCTGTAAGATGAGCATCCACCACAAGTGTGCAGA...TCCCAAGCAGGAGGCCAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR TCA 90 bp | CACAAACTGAGCAGGAGCTGGAGTGAACCCTGGGGTGTTGGGAGCCGGAAGGTTCAAACTGTTCGTGAATaGGCAAGGGGGAGCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HKLSRSWSEPWGVGSRKVQTVRE*ARGSCS Trigger: ACTACAGCTCCCCCTTGCTCATTCACGAACAGTTTG...AACCTTCCGGCTCCCAACACCCCAGGGTTCACTCCAGCTCCTGCTCAGTTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCAAGTCTCCCTGTTTTCTGGGCACCCATCCGTGCAGCTGCTCCTCTGGGCCACGATCATGTGGTTaGAGACATCACAGAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFKSPCFLGTHPCSCSSGPRSCG*RHHRRW Trigger: CCACCTTCTGTGATGTCTGCAACCACATGATCGTGG...CCCAGAGGAGCAGCTGCACGGATGGGTGCCCAGAAAACAGGGAGACTTGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGGGATGGAATGAAAATGGAGACTCTGGGCCAGGGACGTaGCGAACCGGAGGGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PQEEVVLLIKRGWNENGDSGPGT*RTGGPH Trigger: ATGAGGCCCTCCGGTTCGGCACGTCCCTGGCCCAGA...GTCTCCATTTTCATTCCATCCCCTCTTTATCAGGAGCACCACTTCTTCCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGAAGGGAGCTGAGTCCTGGGCAGCCTTAGCTACAGCCCACTTACTGCCCAGTGATCATGTCTCCTaGCCTCATTTCCAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRKGAESWAALATAHLLPSDHVS*PHFQVF Trigger: GAAGACTTGGAAATGAGGCCAGGAGACATGATCACT...GGGCAGTAAGTGGGCTGTAGCTAAGGCTGCCCAGGACTCAGCTCCCTTCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| 3UTR CAA 72 bp | GCTGGAGTGAACCCTGGGGTGTTGGGAGCCGGAAGGTaGACCTTCTTGATTCTCTGCAGGAATCATGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGVNPGVLGAGR*TFLILCRNHAE Trigger: CTCAGCATGATTCCTGCAGAGAATCAAGAAGGTCAACCTTCCGGCTCCCAACACCCCAGGGTTCACTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTCAGAGGTCACGCATATCTGGTTCTCTTTCAGTGTTATCTGCCCCTGGCCTTGGATTCCAGGCTaGTGGTGGACGCAGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSEVTHIWFSFSVICPWPWIPG*WWTQER Trigger: CCTCTCCTGCGTCCACCAGCAGCCTGGAATCCAAGG...CCAGGGGCAGATAACACTGAAAGAGAACCAGATATGCGTGACCTCTGAGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| CDS-3UTR CCA 90 bp | CAACGTAGGTGTTCATCTGTAATGGGTCTTTGGAAAGAGGTCCCTGGTGGTTTGATTCCAGGCTGCTGGTaGACGCAGGAGAGGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRRCSSVMGLWKEVPGGLIPGCW*TQERAA Trigger: AGCCGCCCTCTCCTGCGTCCACCAGCAGCCTGGAAT...CAAACCACCAGGGACCTCTTTCCAAAGACCCATTACAGATGAACACCTACGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| CDS-3UTR CCA 90 bp | CATCCTCCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGGGATGGAATGAAAATTCCAGGGATGGCTATTaGGCTGGGGCCTGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HPPQEEVVLLIKRGWNENSRDGY*AGAWAG Trigger: GCCAGCCCAGGCCCCAGCCCAATAGCCATCCCTGGA...ATTTTCATTCCATCCCCTCTTTATCAGGAGCACCACTTCTTCCTGTGGAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGGCCTGCTTCCAGATTCCTAGCACAGTCTCAGCTCTTCAAGTCTCCCTGTCTGAAGTCGAGGTTCTaGGCGGTGAGTCAGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGPASRFLAQSQLFKSPCLKSRF*AVSQNH Trigger: GTGGTTCTGACTCACCGCCCAGAACCTCGACTTCAG...ACAGGGAGACTTGAAGAGCTGAGACTGTGCTAGGAATCTGGAAGCAGGCCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGAACAGTTATCCAGAATCCATCCAAACTGTTCGTaGATGAGCAAGGGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGIMLRLIGQPWEQLSRIHPNCS*MSKGEL Trigger: CAGCTCCCCCTTGCTCATTCACGAACAGTTTGGATG...GATTCTGGATAACTGTTCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCAGTGGTGCTCCCCTGTCCCTGGATCATCCTCCACAGGAAGAAGTGGTGAGTCTTCTAGGAGAGTaGTCATGTCTCCTGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLSGAPLSLDHPPQEEVVSLLGE*SCLLAS Trigger: TGAGGCCAGGAGACATGATCACTCTCCTAGAAGACT...CACCACTTCTTCCTGTGGAGGATGATCCAGGGACAGGGGAGCACCACTGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR TCA 90 bp | CACCCATCCGTGCAGCTGCTCCTCTGGGTGGACACAGAGAGATCAGCAGCGCTGTTTGTGGTCTTCATTTaGTCTCTGAAGTCATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: HPSVQLLLWVDTERSAALFVVFI*SLKSSI Trigger: TATGGATGACTTCAGAGATCAAATGAAGACCACAAA...CAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAGCTGCACGGATGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR GCA 90 bp | ACCTTCTTGATTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGATCTTTCAGTGTTATCTaGCCCTGGTCCTTGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFLILCRNHAEADWPALGSFSVI*PWSLQP Trigger: TGGCTGCAAGGACCAGGGGCAGATAACACTGAAAGA...TCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAATCAAGAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGTCCCTGGATCATCCTCCACAGGAAGAAGTGGTGCTCCTGATAAAGAGTACCAGTACATCCAGTaGGACGAGGCCTCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPVPGSSSTGRSGAPDKEYQYIQ*DEASLL Trigger: AAGAAGAGAGGCCTCGTCCCACTGGATGTACTGGTA...CTCTTTATCAGGAGCACCACTTCTTCCTGTGGAGGATGATCCAGGGACAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGAACAGTTATCCTTAGCATGTGTTCCTTaGATTCCAGGCTGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSAGIMLRLIGQPWEQLSLACVP*IPGCWW Trigger: CCACCAGCAGCCTGGAATCCAAGGAACACATGCTAA...GGATAACTGTTCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGCTACATTTATTCTAAGATGTTTTTCTCAGTGGTGCTCCCCTGTCCCTGGCCGCAGCGCAGTCCGTaGTTAGCATGTGTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGYIYSKMFFSVVLPCPWPQRSP*LACVPW Trigger: CCAAGGAACACATGCTAAGCACGGACTGCGCTGCGG...CCAGGGACAGGGGAGCACCACTGAGAAAAACATCTTAGAATAAATGTAGCCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTTGATTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGAGTTCCCACGATCATGTaGTTGCAGACATCACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TFLILCRNHAEADWPALGVPTIM*LQTSQK Trigger: CTTCTGTGATGTCTGCAACCACATGATCGTGGGAAC...TCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAATCAAGAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTTGATTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGACCATCTGCACACTTGTaGTGGATGCTCATCTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TFLILCRNHAEADWPALGPSAHL*WMLILQ Trigger: CTGTAAGATGAGCATCCACCACAAGTGTGCAGATGG...TCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAATCAAGAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGCTACATTTATTCTAAGATGTTTTTCTCAGTGGTGCTCCCCTGTCCCTGGGTCAGATCCATCTCCTaGCCCATCGGCCTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGYIYSKMFFSVVLPCPWVRSIS*PIGLFR Trigger: CCTGAAGAGGCCGATGGGCCAGGAGATGGATCTGAC...CCAGGGACAGGGGAGCACCACTGAGAAAAACATCTTAGAATAAATGTAGCCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | CACCCATCCGTGCAGCTGCTCCTCTGGGTGGACACAGAGAGATCAGCAGCGCTGATCCATACCGTTTTCTaGATATGTAAACACACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HPSVQLLLWVDTERSAALIHTVF*ICKHTV Trigger: AACAGTGTGTTTACATATCCAGAAAACGGTATGGAT...CAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAGCTGCACGGATGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAGTGGTGCTCCCCTGTCCCTGGATCATCCTCCACAGGAAGAAGTGGTGCTGAACAAAGTTGGCTaGAAAGAAACCAACCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSGAPLSLDHPPQEEVVLNKVG*KETNPV Trigger: GACAGGGTTGGTTTCTTTCCAGCCAACTTTGTTCAG...CACCACTTCTTCCTGTGGAGGATGATCCAGGGACAGGGGAGCACCACTGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| 3UTR CAA 72 bp | CCGAACCGGAGGGCCTCATACACGGGGTCCACTTTATaGCCACACGCAATGGGCATAACTTCTTTAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PNRRASYTGSTL*PHAMGITSLMH Trigger: ATGCATTAAAGAAGTTATGCCCATTGCGTGTGGCAATAAAGTGGACCCCGTGTATGAGGCCCTCCGGTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| CDS-3UTR TCA 90 bp | CTGATTGGCCAGCCCTGGGAACAGTTATCCAGAATCAGAGAAACTTGGCTACTCTTAAAGACATGCTCCTaGAAGGCGTGGAGCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIGQPWEQLSRIRETWLLLKTCS*KAWSLL Trigger: CAGCAAGCTCCACGCCTTTCAGGAGCATGTCTTTAA...GAGTAGCCAAGTTTCTCTGATTCTGGATAACTGTTCCCAGGGCTGGCCAATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGAGGAAGGCATCGCAGTGTGGTATGTTCTTGTAAACATCGGTACAGGTAAACCAACCCTGTCCTaGATCTTTCCTTTCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: AWEEGIAVWYVLVNIGTGKPTLS*IFPFHQ Trigger: CTGGTGGAAAGGAAAGATTCAGGACAGGGTTGGTTT...ACCTGTACCGATGTTTACAAGAACATACCACACTGCGATGCCTTCCTCCCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAAGTGGTGCTCCTGATAAAGAGGGGATGGAATGAAAATGGAGACTCTTCCCACACTTGTGGTGGATaGTCATCTTACAGGCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EEVVLLIKRGWNENGDSSHTCGG*SSYRLR Trigger: GCGGAGCCTGTAAGATGAGCATCCACCACAAGTGTG...GGAAGAGTCTCCATTTTCATTCCATCCCCTCTTTATCAGGAGCACCACTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTGAGGCTGATTGGCCAGCCCTGGGAACAGTTATCCAGAATCAGAGAAACTGACCGTTTTAGTTTCTaGAGCTTGGATTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MLRLIGQPWEQLSRIRETDRFSF*SLDSRL Trigger: CAGCCTGGAATCCAAGCTCCAGAAACTAAAACGGTC...AGTTTCTCTGATTCTGGATAACTGTTCCCAGGGCTGGCCAATCAGCCTCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTTGATTCTCTGCAGGAATCATGCTGAGGCTGATTGGCCAGCCCTGGGAGAGGTCACGCATATCTaGTTCTCTTTCAGTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: TFLILCRNHAEADWPALGEVTHI*FSFSVI Trigger: GATAACACTGAAAGAGAACCAGATATGCGTGACCTC...TCCCAGGGCTGGCCAATCAGCCTCAGCATGATTCCTGCAGAGAATCAAGAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGTCCCTGGATCATCCTCCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGTTTCACATCACTGTTaGTTCTTGGGAAGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPVPGSSSTGRSGAPDKEVSHHC*FLGRSC Trigger: ACAACTTCTTCCCAAGAACCAACAGTGATGTGAAAC...CTCTTTATCAGGAGCACCACTTCTTCCTGTGGAGGATGATCCAGGGACAGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | GGATGTGCTGCTGAAGAGAAAGAAAGAACAATCCTGCCAGCCAAACTGAGACACTTGGAAAGAGGTCCCTaGTGGTTTGTGGTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GCAAEEKERTILPAKLRHLERGP*WFVVFI Trigger: AATGAAGACCACAAACCACCAGGGACCTCTTTCCAA...GTGTCTCAGTTTGGCTGGCAGGATTGTTCTTTCTTTCTCTTCAGCAGCACATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS-3UTR CCA 90 bp | TTATCCAGAATCAGAGAAACTTGGCTACTCGGCAGCTCCAAACTTCTCACTAGGTCTGTAATGGGTCTTTaGAAAGAGGTCCCTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSRIRETWLLGSSKLLTRSVMGL*KEVPGG Trigger: ACCACCAGGGACCTCTTTCCAAAGACCCATTACAGA...CCTAGTGAGAAGTTTGGAGCTGCCGAGTAGCCAAGTTTCTCTGATTCTGGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| 3UTR CAA 72 bp | TCATCCATACCGTTTTCTGGATATGTAAACACACTGTaGCTCCGTGTCCTCATGTCAGATCCATCTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSIPFSGYVNTL*LRVLMSDPSPG Trigger: GCCAGGAGATGGATCTGACATGAGGACACGGAGCAACAGTGTGTTTACATATCCAGAAAACGGTATGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| 3UTR CAA 72 bp | TTTGGAAAGAGGTCCCTGGTGGTTTGTGGTCTTCATTaGATCTCTGAAGTCATCCATACCGTTTTCTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: FGKRSLVVCGLH*ISEVIHTVFWI Trigger: TATCCAGAAAACGGTATGGATGACTTCAGAGATCAAATGAAGACCACAAACCACCAGGGACCTCTTTCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| CDS GCA 90 bp | TGGATTCCAGGCTGCTGGTGGACGCAGGAGAGGGCGGCTGCTCTGTaGCCGTTGCCTCCCCGGTCAGTCCGTCTCCGCTGTCCTCGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: WIPGCWWTQERAAAL*PLPPRSVRLRCPRG Trigger: CCCGCGAGGACAGCGGAGACGGACTGACCGGGGAGGCAACGGGCACAGAGCAGCCGCCCTCTCCTGCGTCCACCAGCAGCCTGGAATCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
||
| CDS CCA 90 bp | GCTGTTGCTGCCGGGGTGCAGGCCAGCCTTGGTGGGCATGGACGCTaGGCTTCCAGGGATGGCTATTGGGCTGGGGCCTGGGCTGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AVAAGVQASLGGHGR*ASRDGYWAGAWAGL Trigger: AAGGCCAGCCCAGGCCCCAGCCCAATAGCCATCCCTGGAAGCCCAGCGTCCATGCCCACCAAGGCTGGCCTGCACCCCGGCAGCAACAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS CCA 90 bp | GGAGCTTGCTGTTGCTGCCGGGGTGCAGGCCAGCCTTGGTGGGCATaGACGCTGGGCTTCCAGGGATGGCTATTGGGCTGGGGCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GACCCCRGAGQPWWA*TLGFQGWLLGWGLG Trigger: GCCCAGGCCCCAGCCCAATAGCCATCCCTGGAAGCCCAGCGTCCATGCCCACCAAGGCTGGCCTGCACCCCGGCAGCAACAGCAAGCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS GCA 90 bp | TGGAGCTTGGATTCCAGGCTGCTGGTGGACGCAGGAGAGGGCGGCTaGTCTGTGCCCGTTGCCTCCCCGGTCAGTCCGTCTCCGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WSLDSRLLVDAGEGG*SVPVASPVSPSPLS Trigger: GGACAGCGGAGACGGACTGACCGGGGAGGCAACGGGCACAGAGCAGCCGCCCTCTCCTGCGTCCACCAGCAGCCTGGAATCCAAGCTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
||
| CDS GCA 90 bp | TGTTCCTTGGATTCCAGGCTGCTGGTGGACGCAGGAGAGGGCGGCTaGTCTGTGCCCGTTGCCTCCCCGGTCAGTCCGTCTCCGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSLDSRLLVDAGEGG*SVPVASPVSPSPLS Trigger: GGACAGCGGAGACGGACTGACCGGGGAGGCAACGGGCACAGAGCAGCCGCCCTCTCCTGCGTCCACCAGCAGCCTGGAATCCAAGGAACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
||
| CDS CCA 90 bp | CGCAGTCCGTGCTTAGCATGTGTTCCTTGGATTCCAGGCTGCTGGTaGACGCAGGAGAGGGCGGCTGCTCTGTGCCCGTTGCCTCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RSPCLACVPWIPGCW*TQERAAALCPLPPR Trigger: CCGGGGAGGCAACGGGCACAGAGCAGCCGCCCTCTCCTGCGTCCACCAGCAGCCTGGAATCCAAGGAACACATGCTAAGCACGGACTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| CDS CCA 90 bp | GGGCATGGACGCTGGGCTTCCAGGGATGGCTATTGGGCTGGGGCCTaGGCTGGCCTTGGCCAGCAGGTCTGCTTGCGGTTTCACATCACT | + |
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Preference number: 5 (lower is better) Translates to: GHGRWASRDGYWAGA*AGLGQQVCLRFHIT Trigger: AGTGATGTGAAACCGCAAGCAGACCTGCTGGCCAAGGCCAGCCCAGGCCCCAGCCCAATAGCCATCCCTGGAAGCCCAGCGTCCATGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS-3UTR CAA 90 bp | CTGCTCTCAGGACGCCTTGATGTGCTGTGCAGTGGGCCTGCTTCCAGATTCCTAGGGCCTGGGCTGGCCTaGGCCAGCAGGTCTGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: LLSGRLDVLCSGPASRFLGPGLA*ASRSAC Trigger: GCAAGCAGACCTGCTGGCCAAGGCCAGCCCAGGCCC...TAGGAATCTGGAAGCAGGCCCACTGCACAGCACATCAAGGCGTCCTGAGAGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS CCA 90 bp | CTGGGCTTCCAGGGATGGCTATTGGGCTGGGGCCTGGGCTGGCCTTaGCCAGCAGGTCTGCTTGCGGTTTCACATCACTGTTGGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LGFQGWLLGWGLGWP*PAGLLAVSHHCWFL Trigger: CAAGAACCAACAGTGATGTGAAACCGCAAGCAGACCTGCTGGCCAAGGCCAGCCCAGGCCCCAGCCCAATAGCCATCCCTGGAAGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS-3UTR CAA 90 bp | GCTGGGATGCTGCTCTCAGGACGCCTTGATGTGCTGTGCAGTGGGCCTGCTTCCCTTAGCATGTGTTCCTaGGATTCCAGGCTGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: AGMLLSGRLDVLCSGPASLSMCS*DSRLLV Trigger: CACCAGCAGCCTGGAATCCAAGGAACACATGCTAAG...GGAAGCAGGCCCACTGCACAGCACATCAAGGCGTCCTGAGAGCAGCATCCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| CDS GCA 90 bp | GCTATTGGGCTGGGGCCTGGGCTGGCCTTGGCCAGCAGGTCTGCTTaGGGTTTCACATCACTGTTGGTTCTTGGGAAGAAGTTGTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: AIGLGPGLALASRSA*GFTSLLVLGKKLSA Trigger: TGCTGACAACTTCTTCCCAAGAACCAACAGTGATGTGAAACCGCAAGCAGACCTGCTGGCCAAGGCCAGCCCAGGCCCCAGCCCAATAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS-3UTR CAA 90 bp | CTGCTCCTCTGGGTGGACACAGAGAGATCAGCAGCGCTGGCCTCCTGCTTGGGATTCCACCAGTCTTCATaGGAGTCTTCTAGGAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: LLLWVDTERSAALASCLGFHQSS*ESSRRV Trigger: CACTCTCCTAGAAGACTCCAATGAAGACTGGTGGAA...TCCCAAGCAGGAGGCCAGCGCTGCTGATCTCTCTGTGTCCACCCAGAGGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS-3UTR CAA 90 bp | CACAAACTGAGCAGGAGCTGGAGTGAACCCTGGGGTGTTGGGAGCCGGAAGGTTATCTGTAATGGGTCTTaGGAAAGAGGTCCCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: HKLSRSWSEPWGVGSRKVICNGS*ERGPWW Trigger: CCACCAGGGACCTCTTTCCAAAGACCCATTACAGAT...AACCTTCCGGCTCCCAACACCCCAGGGTTCACTCCAGCTCCTGCTCAGTTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS-3UTR CAA 90 bp | CATCCTCCACAGGAAGAAGTGGTGCTCCTGATAAAGAGGGGATGGAATGAAAATTTCCAGGGATGGCTATaGGGCTGGGGCCTGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: HPPQEEVVLLIKRGWNENFQGWL*GWGLGW Trigger: CCAGCCCAGGCCCCAGCCCAATAGCCATCCCTGGAA...ATTTTCATTCCATCCCCTCTTTATCAGGAGCACCACTTCTTCCTGTGGAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS-3UTR CAA 90 bp | GCTTCCTCTGTTTGCACAGAGATGAAGCATGACCCGGTCCGTTCCACTTCACAGCCCACGATCATGTGGTaGCAGACATCACAGAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: ASSVCTEMKHDPVRSTSQPTIMW*QTSQKV Trigger: CACCTTCTGTGATGTCTGCAACCACATGATCGTGGG...CTGTGAAGTGGAACGGACCGGGTCATGCTTCATCTCTGTGCAAACAGAGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS-3UTR CAA 90 bp | TCCCCTGTCCCTGGATCATCCTCCACAGGAAGAAGTGGTGCTCCTGATAAAGAGTTTAGTTTCTGGAGCTaGGATTCCAGGCTGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: SPVPGSSSTGRSGAPDKEFSFWS*DSRLLV Trigger: CACCAGCAGCCTGGAATCCAAGCTCCAGAAACTAAA...CTCTTTATCAGGAGCACCACTTCTTCCTGTGGAGGATGATCCAGGGACAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS-3UTR CAA 90 bp | GAAGAAGTGGTGCTCCTGATAAAGAGGGGATGGAATGAAAATGGAGACTCTTCCAATCCCTTTGGCAACTaGCCCATGCACCGCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: EEVVLLIKRGWNENGDSSNPFGN*PMHRWG Trigger: GCCCCAGCGGTGCATGGGCAAGTTGCCAAAGGGATT...GGAAGAGTCTCCATTTTCATTCCATCCCCTCTTTATCAGGAGCACCACTTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS-3UTR CAA 90 bp | AGAAAGAACAATCCTGCCAGCCAAACTGAGACACAAACTGAGCAGGAGCTGGAGATCTGCCCCTGGTCCTaGCAGCCAATGAAGGTTCGA | + |
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Preference number: 5 (lower is better) Translates to: RKNNPASQTETQTEQELEICPWS*QPMKVR Trigger: TCGAACCTTCATTGGCTGCAAGGACCAGGGGCAGAT...CTCCAGCTCCTGCTCAGTTTGTGTCTCAGTTTGGCTGGCAGGATTGTTCTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS-3UTR CAA 90 bp | CAGTCTCAGCTCTTCAAGTCTCCCTGTTTTCTGGGCACCCATCCGTGCAGCTGCGTTTGTGGTCTTCATTaGATCTCTGAAGTCATCCAT | + |
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Preference number: 5 (lower is better) Translates to: QSQLFKSPCFLGTHPCSCVCGLH*ISEVIH Trigger: ATGGATGACTTCAGAGATCAAATGAAGACCACAAAC...GCAGCTGCACGGATGGGTGCCCAGAAAACAGGGAGACTTGAAGAGCTGAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS-3UTR CAA 90 bp | GCTTGGGAGGAAGGCATCGCAGTGTGGTATGTTCTTGTAAACATCGGTACAGGTGGTTTCACATCACTGTaGGTTCTTGGGAAGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: AWEEGIAVWYVLVNIGTGGFTSL*VLGKKL Trigger: CAACTTCTTCCCAAGAACCAACAGTGATGTGAAACC...ACCTGTACCGATGTTTACAAGAACATACCACACTGCGATGCCTTCCTCCCAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS-3UTR CAA 90 bp | TTATCCAGAATCAGAGAAACTTGGCTACTCGGCAGCTCCAAACTTCTCACTAGGAGGCCATCTGCACACTaGTGGTGGATGCTCATCTTA | + |
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Preference number: 5 (lower is better) Translates to: LSRIRETWLLGSSKLLTRRPSAH*WWMLIL Trigger: TAAGATGAGCATCCACCACAAGTGTGCAGATGGCCT...CCTAGTGAGAAGTTTGGAGCTGCCGAGTAGCCAAGTTTCTCTGATTCTGGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS-3UTR CAA 90 bp | CTAGGATGTGCTGCTGAAGAGAAAGAAAGAACAATCCTGCCAGCCAAACTGAGATATGTAAACACACTGTaGCTCCGTGTCCTCATGTCA | + |
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Preference number: 5 (lower is better) Translates to: LGCAAEEKERTILPAKLRYVNTL*LRVLMS Trigger: TGACATGAGGACACGGAGCAACAGTGTGTTTACATA...TCTCAGTTTGGCTGGCAGGATTGTTCTTTCTTTCTCTTCAGCAGCACATCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS GCA 72 bp | GGTGGACGCAGGAGAGGGCGGCTGCTCTGTGCCCGTTaGCTCCCCGGTCAGTCCGTCTCCGCTGTCCTCGCG | + |
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Preference number: 6 (lower is better) Translates to: GGRRRGRLLCAR*LPGQSVSAVLA Trigger: CGCGAGGACAGCGGAGACGGACTGACCGGGGAGGCAACGGGCACAGAGCAGCCGCCCTCTCCTGCGTCCACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| CDS CAA 72 bp | TGGTGGACGCAGGAGAGGGCGGCTGCTCTGTGCCCGTaGCCTCCCCGGTCAGTCCGTCTCCGCTGTCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: WWTQERAAALCP*PPRSVRLRCPR Trigger: GCGAGGACAGCGGAGACGGACTGACCGGGGAGGCAACGGGCACAGAGCAGCCGCCCTCTCCTGCGTCCACCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| CDS CAA 90 bp | GGCCAGCCTTGGTGGGCATGGACGCTGGGCTTCCAGGGATGGCTATaGGGCTGGGGCCTGGGCTGGCCTTGGCCAGCAGGTCTGCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: GQPWWAWTLGFQGWL*GWGLGWPWPAGLLA Trigger: CGCAAGCAGACCTGCTGGCCAAGGCCAGCCCAGGCCCCAGCCCAATAGCCATCCCTGGAAGCCCAGCGTCCATGCCCACCAAGGCTGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS GCA 72 bp | GATTCCAGGCTGCTGGTGGACGCAGGAGAGGGCGGCTaGTCTGTGCCCGTTGCCTCCCCGGTCAGTCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: DSRLLVDAGEGG*SVPVASPVSPS Trigger: AGACGGACTGACCGGGGAGGCAACGGGCACAGAGCAGCCGCCCTCTCCTGCGTCCACCAGCAGCCTGGAATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035083.8 ENSMUST00000161995.2 |
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| CDS CCA 72 bp | CAGCCTTGGTGGGCATGGACGCTGGGCTTCCAGGGATaGCTATTGGGCTGGGGCCTGGGCTGGCCTTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: QPWWAWTLGFQG*LLGWGLGWPWP Trigger: TGGCCAAGGCCAGCCCAGGCCCCAGCCCAATAGCCATCCCTGGAAGCCCAGCGTCCATGCCCACCAAGGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS CCA 72 bp | CGCTGGGCTTCCAGGGATGGCTATTGGGCTGGGGCCTaGGCTGGCCTTGGCCAGCAGGTCTGCTTGCGGTTT | + |
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Preference number: 6 (lower is better) Translates to: RWASRDGYWAGA*AGLGQQVCLRF Trigger: AAACCGCAAGCAGACCTGCTGGCCAAGGCCAGCCCAGGCCCCAGCCCAATAGCCATCCCTGGAAGCCCAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS CCA 72 bp | GCATGGACGCTGGGCTTCCAGGGATGGCTATTGGGCTaGGGCCTGGGCTGGCCTTGGCCAGCAGGTCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: AWTLGFQGWLLG*GLGWPWPAGLL Trigger: AAGCAGACCTGCTGGCCAAGGCCAGCCCAGGCCCCAGCCCAATAGCCATCCCTGGAAGCCCAGCGTCCATGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS CAA 72 bp | TGGAGCTTGCTGTTGCTGCCGGGGTGCAGGCCAGCCTaGGTGGGCATGGACGCTGGGCTTCCAGGGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: WSLLLLPGCRPA*VGMDAGLPGMA Trigger: AGCCATCCCTGGAAGCCCAGCGTCCATGCCCACCAAGGCTGGCCTGCACCCCGGCAGCAACAGCAAGCTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS CAA 90 bp | GGCAACTTGCCCATGCACCGCTGGGGCGCCAGGCCATCTGCACACTaGTGGTGGATGCTCATCTTACAGGCTCCGCAGCGCAGTCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: GNLPMHRWGARPSAH*WWMLILQAPQRSPC Trigger: GCACGGACTGCGCTGCGGAGCCTGTAAGATGAGCATCCACCACAAGTGTGCAGATGGCCTGGCGCCCCAGCGGTGCATGGGCAAGTTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS GCA 72 bp | AGACATGCTCCTGAAAGGCGTGGAGCTTGCTGTTGCTaGCGGGGTGCAGGCCAGCCTTGGTGGGCATGGACG | + |
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Preference number: 6 (lower is better) Translates to: RHAPERRGACCC*RGAGQPWWAWT Trigger: CGTCCATGCCCACCAAGGCTGGCCTGCACCCCGGCAGCAACAGCAAGCTCCACGCCTTTCAGGAGCATGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS CCA 72 bp | GGCTTCCAGGGATGGCTATTGGGCTGGGGCCTGGGCTaGCCTTGGCCAGCAGGTCTGCTTGCGGTTTCACAT | + |
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Preference number: 6 (lower is better) Translates to: GFQGWLLGWGLG*PWPAGLLAVSH Trigger: ATGTGAAACCGCAAGCAGACCTGCTGGCCAAGGCCAGCCCAGGCCCCAGCCCAATAGCCATCCCTGGAAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS CCA 72 bp | CCGTGCTTAGCATGTGTTCCTTGGATTCCAGGCTGCTaGTGGACGCAGGAGAGGGCGGCTGCTCTGTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PCLACVPWIPGC*WTQERAAALCP Trigger: CGGGCACAGAGCAGCCGCCCTCTCCTGCGTCCACCAGCAGCCTGGAATCCAAGGAACACATGCTAAGCACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161995.2 |
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| CDS CCA 72 bp | CAGGGATGGCTATTGGGCTGGGGCCTGGGCTGGCCTTaGCCAGCAGGTCTGCTTGCGGTTTCACATCACTGT | + |
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Preference number: 6 (lower is better) Translates to: QGWLLGWGLGWP*PAGLLAVSHHC Trigger: ACAGTGATGTGAAACCGCAAGCAGACCTGCTGGCCAAGGCCAGCCCAGGCCCCAGCCCAATAGCCATCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS CCA 72 bp | ACCGTTTTAGTTTCTGGAGCTTGGATTCCAGGCTGCTaGTGGACGCAGGAGAGGGCGGCTGCTCTGTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: TVLVSGAWIPGC*WTQERAAALCP Trigger: CGGGCACAGAGCAGCCGCCCTCTCCTGCGTCCACCAGCAGCCTGGAATCCAAGCTCCAGAAACTAAAACGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS CAA 90 bp | GGCTATTGGGCTGGGGCCTGGGCTGGCCTTGGCCAGCAGGTCTGCTaGCGGTTTCACATCACTGTTGGTTCTTGGGAAGAAGTTGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: GYWAGAWAGLGQQVC*RFHITVGSWEEVVS Trigger: GCTGACAACTTCTTCCCAAGAACCAACAGTGATGTGAAACCGCAAGCAGACCTGCTGGCCAAGGCCAGCCCAGGCCCCAGCCCAATAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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| CDS GCA 72 bp | TGGATGCTCATCTTACAGGCTCCGCAGCGCAGTCCGTaGTTAGCATGTGTTCCCACGATCATGTGGTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: WMLILQAPQRSP*LACVPTIMWLQ Trigger: CTGCAACCACATGATCGTGGGAACACATGCTAAGCACGGACTGCGCTGCGGAGCCTGTAAGATGAGCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035083.8 |
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