RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STAB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042286

Ensembl transcript IDs: ENSMUST00000036618.14, ENSMUST00000159249.2, ENSMUST00000160024.8

Found 520 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp TTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTaGCAAGCAATAAAAATGGTCTGTGTCTTCTCAGAG +
Preference number: 3 (lower is better)
Translates to: LSWTDHWPPQPP*QAIKMVCVFSE
Trigger: CTCTGAGAAGACACAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR TCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCGCTGCCCTGCTCCCGTaGGCCCCGAGGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAAALLP*APRTGW
Trigger: CCACCCTGTCCTCGGGGCTCACGGGAGCAGGGCAGC...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTCCCGTTGCACGTGCTaGTCCCGTCACCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPSRCTC*SRHPRS
Trigger: GCTTCGTGGGTGACGGGATCAGCACGTGCAACGGGA...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCGGAGTCCCCTGGAAGTaGGGGTGGAAGCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPGVPWK*GWKLPS
Trigger: CGATGGCAGCTTCCACCCCCACTTCCAGGGGACTCC...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCAGGTAGCCAGGCCGTaGCAGCCGCCATTGCCCACC +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQQVARP*QPPLPT
Trigger: GGTGGGCAATGGCGGCTGCCACGGCCTGGCTACCTG...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCACCGCGCAGCCCCTCCTaGCACAGCCCATGGTCACAG +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSPRSPS*HSPWSQ
Trigger: CTGTGACCATGGGCTGTGCCAGGAGGGGCTGCGCGG...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCACGCATCCTGAAGCATaGGCAGGAGGCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPTHPEA*AGGQPP
Trigger: CGGTGGCTGGCCTCCTGCCCATGCTTCAGGATGCGT...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCGGGGTGACGACAGGGTaGGCAGCAGAGCCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSAGVTTG*AAEPLA
Trigger: GGCCAACGGCTCTGCTGCCCACCCTGTCGTCACCCC...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCAGGCAGGTGCAAGTaGCCACTGTCCCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSAGRCK*PLSPPG
Trigger: GCCAGGTGGGGACAGTGGTCACTTGCACCTGCCTGC...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGGGCGGCAGAGAGTTaGGGGAGTGAAGCAAGGACG +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPWAAES*GSEART
Trigger: CGTCCTTGCTTCACTCCCTCAACTCTCTGCCGCCCA...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCACAGGTGGCCTTGCCTaGCCCACGGTACAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPTGGLA*PTVQAE
Trigger: TTCTGCCTGTACCGTGGGCCAGGCAAGGCCACCTGT...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCGTGATGGTGACCTCCTaGCCAGCCAGCGTCCACCAC +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATVMVTS*PASVHH
Trigger: GTGGTGGACGCTGGCTGGCCAGGAGGTCACCATCAC...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCGCACCCTGGAGAAAATaGGCCCTGGCCAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPAPWRK*ALASSG
Trigger: GCCAGAACTGGCCAGGGCCCATTTTCTCCAGGGTGC...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCGGCAAGCTTGGCACTaGGGTCCAAAGGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATRQAWH*GPKAPG
Trigger: CCCAGGTGCCTTTGGACCCCAGTGCCAAGCTTGCCG...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCCCTGCCAGCCCGCATaGCAGACACAGCTTCCATTC +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATPCQPA*QTQLPF
Trigger: GAATGGAAGCTGTGTCTGTCATGCGGGCTGGCAGGG...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCCGATGGGACGCATCCTaGAGCATGGGCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSARWDAS*SMGRRP
Trigger: TGGCCTCCTGCCCATGCTTCAGGATGCGTCCCATCG...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCGCAGGTGGGTGCCTCTaGAGAGCACTGGGAATTCTG +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPAGGCL*RALGIL
Trigger: CAGAATTCCCAGTGCTCTGCAGAGGCACCCACCTGC...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCGTGGCAGCCGCCATTaGCCACCCGACAGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLARGSRH*PPDRGQ
Trigger: TTGACCCCTGTCGGGTGGGCAATGGCGGCTGCCACG...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCGTCCGAAGAGGGAGCTaGCAGGAGCTTCCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPVRRGS*QELPAK
Trigger: CTTTGCTGGAAGCTCCTGGCAGCTCCCTCTTCGGAC...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCAGCCATCCTGGCAGGTaGATGTCCGCTGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSASHPGR*MSAAQE
Trigger: CTCCTGGGCAGCGGACATGCACCTGCCAGGATGGCT...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGAGCCCTCACGGCAGCTaGAGGAGACCTGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLSPHGS*RRPAGG
Trigger: GCCCCCAGCAGGTCTCCTGCAGCTGCCGTGAGGGCT...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCGGGGTGCACACAGGCTaGAACTCCAGCTGCACTTCA +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPGVHTG*NSSCTS
Trigger: TGAAGTGCAGCTGGAGTTGCAGCCTGTGTGCACCCC...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCGTGCACACGGTGGGGTaGACACAGGCTGCAACTCCA +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATVHTVG*TQAATP
Trigger: TGGAGTTGCAGCCTGTGTGCACCCCACCGTGTGCAC...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCTGGGGAGCAAGCAGATaGCTGGCAGGGGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSAWGASR*LAGVRS
Trigger: GCTCCTGACCCCTGCCAGCCATCTGCTTGCTCCCCA...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGTCGGCACATACAGGTaGCCTTGCCTGGCCCACGGT +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSVGTYR*PCLAHG
Trigger: ACCGTGGGCCAGGCAAGGCCACCTGTATGTGCCGAC...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCGGCCCTGGCCAGTTCTaGCAGCATCTTTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPGPGQF*QHLWLQ
Trigger: TTGCAGCCAAAGATGCTGCCAGAACTGGCCAGGGCC...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCCCCAGGAATCTGTCTTaGCACTGCCCATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPPRNLS*HCPWPE
Trigger: CTCAGGCCATGGGCAGTGCCAAGACAGATTCCTGGG...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCACCTTGAGGACCCTCTaGGTGTCGGGGAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATTLRTL*VSGKSS
Trigger: GGAGGACTTCCCCGACACCCAGAGGGTCCTCAAGGT...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR TCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGCAGCTGGAAGCCTTaGGTACAGCGGAATTTCCGG +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPCSWKP*VQRNFR
Trigger: CCGGAAATTCCGCTGTACTCAAGGCTTCCAGCTGCA...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCAGAGAGTTGAGGGAGTaGAGCAAGGACGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATRELRE*SKDGSL
Trigger: CAGGGAGCCGTCCTTGCTTCACTCCCTCAACTCTCT...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCATCCGGGCAGGCACTTaGAGGTGGGTGCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAIRAGT*RWVPLQ
Trigger: CTGCAGAGGCACCCACCTGCAAGTGCCTGCCCGGAT...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCCGGTCCCAGCAGGATaGGTCCCTCCTCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATPVPAG*VPPQRY
Trigger: ATATCTCTGAGGAGGGACGCATCCTGCTGGGACCGG...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCGATGGCCACACAGATaGGGCCATCCCCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLARWPHR*GHPHSS
Trigger: GCTGGAGTGGGGATGGCCGCATCTGTGTGGCCATCG...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGGCACACTATCTAGTTaGTGCAGCAACCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSGTLSS*CSNPGP
Trigger: CGGGCCCGGGTTGCTGCAGCAACTAGATAGTGTGCC...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTGGCCCAGGAGGGAGTTaGGGTGTCCCCCTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGGPGGS*GVPLSA
Trigger: TGCGGAAAGGGGGACACCGCAACTCCCTCCTGGGCC...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGTGCACTCACAGCTGTTaGCCAGACGGCACACGGCCT +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQCTHSC*PDGTRP
Trigger: AGGCCGTGTGCCGTCTGGGCAACAGCTGTGAGTGCA...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCGGGCTGGTCCCTTCTTaGCATGGGGAGAAGTCATCG +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATGLVPS*HGEKSS
Trigger: CGATGACTTCTCCCCATGGCAAGAAGGGACCAGCCC...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR CCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCGGCCAACAGTTTTCTTaGAGTCCCCTGGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPGQQFS*SPLEVG
Trigger: CCCCACTTCCAGGGGACTCCAAGAAAACTGTTGGCC...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGTGCCGTAGCAGGGGTTaGAGAAGCCCCCAGGACACT +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQCRSRG*RSPQDT
Trigger: AGTGTCCTGGGGGCTTCTCCAACCCCTGCTACGGCA...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCAGCAGTCGGGCACCTaGATCTTCTTGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATQQSGT*IFLAQV
Trigger: CACCTGTGCCAAGAAGATCCAGGTGCCCGACTGCTG...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGGGTACCAAAGAAGCCTaGGCAGCAGTCGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQGTKEA*AAVGHL
Trigger: CAGGTGCCCGACTGCTGCCCAGGCTTCTTTGGTACC...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTGGTGAGCAGCCCCCATaGCCAGAGGCACAGGGATCC +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGGEQPP*PEAQGS
Trigger: GGATCCCTGTGCCTCTGGCCATGGGGGCTGCTCACC...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCGGGTCCAAAGGCACCTaGGGCACAGAGTTCACAGGC +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSAGSKGT*GTEFTG
Trigger: GCCTGTGAACTCTGTGCCCCAGGTGCCTTTGGACCC...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCCTGCAACCTCCACGGTaGCCATCCAAGCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSALQPPR*PSKQGS
Trigger: AGACCCCTGCTTGGATGGCCACCGTGGAGGTTGCAG...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCGGTCCCTTCTTGCCATaGGGAGAAGTCATCGTCTGC +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPGPFLP*GEVIVC
Trigger: GCAGACGATGACTTCTCCCCATGGCAAGAAGGGACC...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR TCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAATCTGGGCACTGGCACTaGGCCTGCCCCTGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKSGHWH*ACPWGV
Trigger: GACTCCCCAGGGGCAGGCTCAGTGCCAGTGCCCAGA...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACATTCAGCGTTCTCTaGGCAGCCACCACGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSATFSVL*AATTVW
Trigger: CCAGACCGTGGTGGCTGCTCAGAGAACGCTGAATGT...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCAGGGTACCAGGGCTGTaGCTCTGCTGTCGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLARVPGL*LCCRQE
Trigger: TTCCTGCCGACAGCAGAGTCACAGCCCTGGTACCCT...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCCCCAGACTTTCCCACTaGTGTTGTGTATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPPRLSH*CCVSAS
Trigger: GCTGGCAGATACACAACATCAGTGGGAAAGTCTGGG...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCACAGTTGGCATAGGGTaGGCAGCCCCCATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLATVGIG*AAPMAR
Trigger: TCTGGCCATGGGGGCTGCTCACCCTATGCCAACTGT...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTTGGGCCACAGCATCGTaGAGGGGCGATGGGACGCAT +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGWATAS*RGDGTH
Trigger: ATGCGTCCCATCGCCCCTTCACGATGCTGTGGCCCA...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCGCTTCCTTGGCCTCTaGGAAGGTCAGACCATAAGG +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATRFLGL*EGQTIR
Trigger: CCTTATGGTCTGACCTTCTCAGAGGCCAAGGAAGCG...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAGTCTGCCGCTGGGGTaGCGACAGGGTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKSLPLG*RQGGQQ
Trigger: CTGCTGCCCACCCTGTCGTCACCCCAGCGGCAGACT...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCATCCCCCGGCTGGCATTaGTACTCAGAAAGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSSPGWH*YSERWR
Trigger: ACGCCACCTTTCTGAGTATCAATGCCAGCCGGGGGA...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCCCACCTCGTCGTTTTTaGACACGCAGCTGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPPPRRF*TRSWSF
Trigger: GAAAGACCAGCTGCGTGTGCAAAAACGACGAGGTGG...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCCAGGGCCCACATAGCTaGAGAGAGCATCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSAQGPHS*REHQHG
Trigger: GCCATGCTGATGCTCTCTGCAGCTATGTGGGCCCTG...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAACACTATCTAGTTGCTaGAGCAACCCGGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSTLSSC*SNPGPV
Trigger: GACCGGGCCCGGGTTGCTGCAGCAACTAGATAGTGT...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTCCCGAAGAGCCTCTaGGTGGCTGTGCAGGCAACG +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGLPKSL*VAVQAT
Trigger: CGTTGCCTGCACAGCCACGCAGAGGCTCTTCGGGAG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCGTTGCCCGAGTATCCTaGAGCACAGACGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAVARVS*STDAGR
Trigger: CCTGCCTGCGTCTGTGCTGCAGGATACTCGGGCAAC...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCCAGCAGCTGGTCAATaGCATAAGCCAGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATPAAGQ*HKPGHL
Trigger: AAGGTGGCCTGGCTTATGGCATTGACCAGCTGCTGG...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCTGCACTTCACAGCGTaGCCCAGTCCAGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQLHFTA*PSPAFI
Trigger: GATGAAGGCTGGACTGGGGCACGCTGTGAAGTGCAG...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCCACCTGCGTGTGCTTaGGGGCCCTGCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGPPACA*GPCILQ
Trigger: CTGGAGAATGCAGGGCCCCCAAGCACACGCAGGTGG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCTGTGCAGGCAACGGCTaGAGCCCACTGCCAAGATCC +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLACAGNG*SPLPRS
Trigger: GGATCTTGGCAGTGGGCTCCAGCCGTTGCCTGCACA...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGTCCACCAAGACCCCCTaGGCAGGGCTCACACAGGGT +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLSTKTP*AGLTQG
Trigger: ACCCTGTGTGAGCCCTGCCCAGGGGGTCTTGGTGGA...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCATCTTGGCACTGCCCATaGCCTGAGCACACTCCACCA +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSSWHCP*PEHTPP
Trigger: TGGTGGAGTGTGCTCAGGCCATGGGCAGTGCCAAGA...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCACCACCTTGGTACAGTTaGCATAGGGTGAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSPPWYS*HRVSSP
Trigger: GGGGCTGCTCACCCTATGCCAACTGTACCAAGGTGG...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCTGCTGGGGGCCTGTaGGGATACACTCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQPAGGL*GYTQHE
Trigger: TTCATGCTGAGTGTATCCCCACAGGCCCCCAGCAGG...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCAGGAACACGTCCTCTaGCCATCTCCCGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATQEHVL*PSPVLL
Trigger: CAAAAGCACGGGAGATGGCCAGAGGACGTGTTCCTG...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCACTGCAGGGGCTTCTaGGGCCACCAGGGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGHCRGF*GHQGKH
Trigger: ATGCTTGCCCTGGTGGCCCCAGAAGCCCCTGCAGTG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGTACAGCGGCAAGCTTaGCACTGGGGTCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSVQRQA*HWGPKA
Trigger: TGCCTTTGGACCCCAGTGCCAAGCTTGCCGCTGTAC...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCTGGCTGCAGTTaGCATGCTTACTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQPPGCS*HAYCSH
Trigger: GTGGCTGCAGTAAGCATGCCAACTGCAGCCAGGTGG...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCACTCTCTGGGTGGCATTaGCATAGCCCAGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSLSGWH*HSPAAS
Trigger: GGATGCTGCTGGGCTATGCCAATGCCACCCAGAGAG...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCATCCCACACGATGACGTaGCTAACCACAACTGCCCCC +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSSHTMT*LTTTAP
Trigger: GGGGGCAGTTGTGGTTAGCCACGTCATCGTGTGGGA...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR CCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCGGTCCCTTCTTGCCATaGGGAGAAGTCATCGTCTGC +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATGPFLP*GEVIVC
Trigger: GCAGACGATGACTTCTCCCCATGGCAAGAAGGGACC...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR TCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCGCACTCCTGGCAGACTaGACCGCTGAAGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSAALLAD*TAEVFL
Trigger: CAGGAAAACTTCAGCGGTTCAGTCTGCCAGGAGTGC...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCCAATGGCATGTaGTTCACCTCAGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAPSNGM*FTSGWP
Trigger: TGGCCAGCCTGAGGTGAATCACATGCCATTGGAGGG...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCGGGCTGGCCAGAGCATaGATGATGCCGTTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAGLARA*MMPLKA
Trigger: GGCTTTCAACGGCATCATTCATGCTCTGGCCAGCCC...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR GCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCATTAGACCGTACCGTCTaGCCTCGGATGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSLDRTV*PRMKLE
Trigger: CTCCAGCTTCATCCGAGGGCAGACGGTACGGTCTAA...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGAGGGGTCAATGGGGCTaGACTCGTAGCCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQRGQWG*TRSHFQ
Trigger: CTGGAAATGGCTACGAGTGCAGCCCCATTGACCCCT...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCAATCTGTCTTGGCACTaGCCATGGCCTGAGCACACT +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATNLSWH*PWPEHT
Trigger: AGTGTGCTCAGGCCATGGGCAGTGCCAAGACAGATT...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGCAGGTGCATGTCCGCTaGCCAGGAGCCACCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLQVHVR*PGATLV
Trigger: TACCAAGGTGGCTCCTGGGCAGCGGACATGCACCTG...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAACCCCGCAAAATGGCTaGCAGTTTGTCACGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSTPQNG*QFVTVV
Trigger: GACCACCGTGACAAACTGGCAGCCATTTTGCGGGGT...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCCTTCATAGCCCAGGCTaGACTCACAGCTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSALHSPG*THSCCP
Trigger: TGGGCAACAGCTGTGAGTGCAGCCTGGGCTATGAAG...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCAGTTGGCATGCTTACTaGAGCCACCATGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATSWHAY*SHHAPS
Trigger: AGAAGGGGCATGGTGGCTGCAGTAAGCATGCCAACT...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCTGGCTGCAGTTGGCATaGTTACTGCAGCCACCATGC +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSAWLQLA*LLQPPC
Trigger: GCATGGTGGCTGCAGTAAGCATGCCAACTGCAGCCA...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAATCCAGGCAGGTCCCGTaGCCACTACACGGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKSRQVP*PLHGVA
Trigger: GGCGACACCGTGTAGTGGCCACGGGACCTGCCTGGA...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCGTGGTAAGAATCTCCTaGCAGCCCTGCTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSAVVRIS*QPCSSM
Trigger: CATGCTGGAGCAGGGCTGCCAGGAGATTCTTACCAC...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCCCCATCCAGGATAGATaGCAGCCCACAGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSAPIQDR*QPTVLQ
Trigger: CTGGAGAACTGTGGGCTGCCATCTATCCTGGATGGG...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCAGATGGTGTAGGCTTTaGCAGCCTCGATTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATRWCRL*QPRFGP
Trigger: TGGCCCAAATCGAGGCTGCCAAAGCCTACACCATCT...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCATACTCCAGAGCAGGTaGGGCCATAGCGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAILQSR*GHSDPA
Trigger: AGCTGGGTCGCTATGGCCCCACCTGCTCTGGAGTAT...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCAGCCTCCATTGTTCTaGGAACAGGGGTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQQPPLF*EQGSRS
Trigger: GCTTCTGGACCCCTGTTCCCAGAACAATGGAGGCTG...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCTGCATGGTTCGGAGTTaGCCCAGGTTGGGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSACMVRS*PRLGRS
Trigger: TGACCTACCCAACCTGGGCCAACTCCGAACCATGCA...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTGGCGCCAAGGTCAGGTaGCTCCAGCAGCTGGTCAAT +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGGAKVR*LQQLVN
Trigger: ATTGACCAGCTGCTGGAGCCACCTGACCTTGGCGCC...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTTCCAGGCACACGCCATaGTCACTGCAGGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGSRHTP*SLQGLL
Trigger: CAGAAGCCCCTGCAGTGACCATGGCGTGTGCCTGGA...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAAGGCTAAGACCTGAGTaGGCAGGAAGCAATGTCCCC +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSRLRPE*AGSNVP
Trigger: GGGGACATTGCTTCCTGCCCACTCAGGTCTTAGCCT...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAATATCGCGGCGCCCCTaGGCTGCAACTCATAGCGGC +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKISRRP*AATHSG
Trigger: GCCGCTATGAGTTGCAGCTCAGGGGCGCCGCGATAT...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGCTGTCAGGGGTCACCTaGCAGGTAGCTGATCTGTCG +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLLSGVT*QVADLS
Trigger: CGACAGATCAGCTACCTGTCAGGTGACCCCTGACAG...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAATCGGGGCAAAGACTGTaGAGGGCCCAGGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKSGQRL*RAQAHP
Trigger: TGGATGGGCCTGGGCCCTTCACAGTCTTTGCCCCGA...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAGCTCACCAGGCCGGGTaGGACCGCAGGAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKAHQAG*DRRRKR
Trigger: TCTCTTTCTCCTGCGGTCTCACCCGGCCTGGTGAGC...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTGGGCTGGCCAGAGCATaGATGATGCCGTTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGGLARA*MMPLKA
Trigger: GGCTTTCAACGGCATCATTCATGCTCTGGCCAGCCC...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR GCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCGAAGACCCCATTAGCTaGGATGTAGTTGGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATEDPIS*DVVGLV
Trigger: CACAAGGCCAACTACATCGCAGCTAATGGGGTCTTC...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCGAGCAAGGATTGCTaGGTTTGCAGGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSASKDC*VCRRSH
Trigger: ATGGCTTCTCCTGCAAACGCAGCAATCCTTGCTCGC...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGGGCAGCATCTTTGGCTaGAACCAGAAGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLGSIFG*NQKAWS
Trigger: GGACCAGGCCTTCTGGTTGCAGCCAAAGATGCTGCC...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGTCCACAGTGGCATTCTaGACCCAGACTTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQSTVAF*TQTFPL
Trigger: CAGTGGGAAAGTCTGGGTGCAGAATGCCACTGTGGA...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCAGCGACATTCCCCATTaGCCAGGAATCTGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSASDIPH*PGICLG
Trigger: GCCAAGACAGATTCCTGGGCAATGGGGAATGTCGCT...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCACCCCACAGTATGTGTTaGGTCACAGGAACACGTCCT +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSPHSMC*VTGTRP
Trigger: AGGACGTGTTCCTGTGACGCAACACATACTGTGGGG...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGACGTGGTCAATGAAGTaGAGGACACCGTTCACCACC +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQTWSMK*RTPFTT
Trigger: GGTGGTGAACGGTGTCCTGCACTTCATTGACCACGT...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCGTCTGCATTATCTTCTaGAGTCTGGGGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATVCIIF*SLGRHE
Trigger: CTCATGCCTCCCCAGACTGCAGAAGATAATGCAGAC...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000160024.8
CDS-3UTR CCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCACCGCTGAAGTTTTCCTaGCACACACAGGTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSPLKFS*HTQVPF
Trigger: AAACGGGACCTGTGTGTGCCAGGAAAACTTCAGCGG...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTGAGCAAGCAGATGGCTaGCAGGGGTCAGGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGEQADG*QGSGAR
Trigger: TCTTGCTCCTGACCCCTGCCAGCCATCTGCTTGCTC...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCCTCTCCATGCTTCTTTaGGTCGGAGCAGATATGACA +
Preference number: 4 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPLSMLL*VGADMT
Trigger: TGTCATATCTGCTCCGACCCAAAGAAGCATGGAGAG...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCAGCCACAGTCCTCCTaGCACTGCTCTCCATGCTTC +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGQPQSS*HCSPCF
Trigger: GAAGCATGGAGAGCAGTGCCAGGAGGACTGTGGCTG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCTTGCAGAATCGGCCTTaGAAGCCAGGGGCACATGTA +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSALQNRP*KPGAHV
Trigger: TACATGTGCCCCTGGCTTCCAAGGCCGATTCTGCAA...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGCTGGGCCAGCCCTGTaGACCCACAGTTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNAGPAL*THSFPW
Trigger: CCATGGGAAACTGTGGGTCCACAGGGCTGGCCCAGC...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAAGAAGGTGGAGAAGTTaGCAGTGGCGGCCAAGACAT +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSRRWRS*QWRPRH
Trigger: ATGTCTTGGCCGCCACTGCCAACTTCTCCACCTTCT...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCAAGACCTCTCTGGGTaGCATTGGCATAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAQDLSG*HWHSPA
Trigger: TGCTGGGCTATGCCAATGCCACCCAGAGAGGTCTTG...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGTCCCACACGATGACGTaGCTAACCACAACTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLSHTMT*LTTTAP
Trigger: GGGGGCAGTTGTGGTTAGCCACGTCATCGTGTGGGA...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR CCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGAAACCAGGGTTGGGCTaGTCCCTTCTTGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLKPGLG*SLLAMG
Trigger: CCCCATGGCAAGAAGGGACCAGCCCAACCCTGGTTT...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR CCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCTGCCAAAAACAGGGTTaGGGACAGAAACCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATCQKQG*GQKPGL
Trigger: CAACCCTGGTTTCTGTCCCCAACCCTGTTTTTGGCA...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR TCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAATGTCGGCAGAGCTGCTaGGCCAGCGTCGCATTCATG +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKCRQSC*ASVAFM
Trigger: CATGAATGCGACGCTGGCTCAGCAGCTCTGCCGACA...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGCCAGGAGGTGGAGGCTaGAGAAGGAGGCATACTTGT +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLPGGGG*RRRHTC
Trigger: ACAAGTATGCCTCCTTCTTCAGCCTCCACCTCCTGG...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCCGAGCAAAATCATTaGGATAAATGCTGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQPEQNH*DKCCPP
Trigger: GGGAGGGCAGCATTTATCTCAATGATTTTGCTCGGG...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCATTTCAGCAGCGGCAGTaGCATTTCTCTGAGGGATTG +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSFQQRQ*HFSEGL
Trigger: CAATCCCTCAGAGAAATGTCACTGCCGCTGCTGAAA...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCGTCCTCCTCCAGGACTaGATCATCAAAGGGTTCACA +
Preference number: 4 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSAVLLQD*IIKGFT
Trigger: TGTGAACCCTTTGATGATTCAGTCCTGGAGGAGGAC...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR GCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGTCCCGTTTCCTTCTATaGCATCCAGGCAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLSRFLL*HPGRSR
Trigger: ACGGGACCTGCCTGGATGGCATAGAAGGAAACGGGA...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAGCACTTGCAGGTGGGTaGCTCTGCAGAGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKALAGG*LCRALG
Trigger: TCCCAGTGCTCTGCAGAGGCACCCACCTGCAAGTGC...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCGCAGGAATGTGGTTTaGAGGAGACATGGCACCCCT +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGRRNVV*RRHGTP
Trigger: AGGGGTGCCATGTCTCCTGCAAACCACATTCCTGCG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCAGTCCTCCTGGCACTaGTCTCCATGCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGQSSWH*SPCFFG
Trigger: CCCAAAGAAGCATGGAGAGCAGTGCCAGGAGGACTG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCAGCAGAGTCCTGGATaGAGTTGGCATTGGGATCGC +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGQQSPG*SWHWDR
Trigger: GCGATCCCAATGCCAACTGCATCCAGGACTCTGCTG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGGAGATGGTGTTTCCGTaGATGGTTCGGAGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLEMVFP*MVRSWP
Trigger: GGGCCAACTCCGAACCATGCACGGAAACACCATCTC...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCAGACTCTGGCAGACTaGGAGCTCTTGGTCACAGTG +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGQTLAD*ELLVTV
Trigger: CACTGTGACCAAGAGCTCCCAGTCTGCCAGAGTCTG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGGGGCATTTCAGACTCTaGCAGACTGGGAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLGHFRL*QTGSSW
Trigger: CCAAGAGCTCCCAGTCTGCCAGAGTCTGAAATGCCC...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCGAGCACTGGGAATTCTaGGGGCATTTCAGACTCTGG +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAEHWEF*GHFRLW
Trigger: CCAGAGTCTGAAATGCCCCCAGAATTCCCAGTGCTC...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGGGTTTGCAGGAGACATaGCACCCCTCAGAAGCGTTG +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLGLQET*HPSEAL
Trigger: CAACGCTTCTGAGGGGTGCCATGTCTCCTGCAAACC...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTGCTCCAGCATGGCAATaGCTGCTCTTAACCGCAGGA +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGAPAWQ*LLLTAG
Trigger: TCCTGCGGTTAAGAGCAGCCATTGCCATGCTGGAGC...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCGAACCCAGCACAGTCTaGTGCTGCTCTTCATCACAG +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAEPSTV*CCSSSQ
Trigger: CTGTGATGAAGAGCAGCACCAGACTGTGCTGGGTTC...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGCGGGGACATCCACAGTaGCATTCTGCACCCAGACTT +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLRGHPQ*HSAPRL
Trigger: AAGTCTGGGTGCAGAATGCCACTGTGGATGTCCCCG...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGGGTGGCAGCAGGACGTaGTCAATGAAGTGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLGGSRT*SMKCRT
Trigger: TGTCCTGCACTTCATTGACCACGTCCTGCTGCCACC...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCCAGCCTGTTTTTCCTaGAAATGTAGGTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATPACFS*KCRSVH
Trigger: GTGCACTGACCTACATTTCCAGGAAAAACAGGCTGG...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCCTCACACGCTTCCTTaGCCTCTGAGAAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGPHTLP*PLRRSD
Trigger: GTCTGACCTTCTCAGAGGCCAAGGAAGCGTGTGAGG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATACCTTGAGGACCCTCTaGGTGTCGGGGAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNTLRTL*VSGKSS
Trigger: GGAGGACTTCCCCGACACCCAGAGGGTCCTCAAGGT...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR CCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGTTATCTTCTGCAGTCTaGGGAGGCATGAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLLSSAV*GGMSRG
Trigger: CCCCCTGCTCATGCCTCCCCAGACTGCAGAAGATAA...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000160024.8
CDS-3UTR TCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAGGGCAGCAGGCCTTCTaGACCACATCCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKGQQAF*TTSFQH
Trigger: ATGCTGGAAGGATGTGGTTCAGAAGGCCTGCTGCCC...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTTACGCAGTTGCACACTaGTTGGCAGTCAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGYAVAH*LAVRPK
Trigger: TTTGGGCCTGACTGCCAATCAGTGTGCAACTGCGTA...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATCTCTCCCATGACAGGTaGTGCCGTCCCCCACAGTAT +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNLSHDR*CRPPQY
Trigger: ATACTGTGGGGGACGGCATCACCTGTCATGGGAGAG...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGAAGGTCCGTCACCCTTaGGCTCCTTGTATTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLKVRHP*APCIPG
Trigger: TCCTGGAATACAAGGAGCTCAAGGGTGACGGACCTT...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCGTAAGCTCCACGCATTaGGATGGAGTGCAATGGAGT +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAVSSTH*DGVQWS
Trigger: ACTCCATTGCACTCCATCTCAATGCGTGGAGCTTAC...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGAGCACAGTCTGGTGCTaGTCTTCATCACAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQSTVWC*SSSQCL
Trigger: TAAGCACTGTGATGAAGAGCAGCACCAGACTGTGCT...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAACGCTGCAGTTGCCTTTaGCGTAGCAGGGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKRCSCL*RSRGWR
Trigger: TCTCCAACCCCTGCTACGGCAAAGGCAACTGCAGCG...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGAGCCTTTGTGGCAAATaGAGTGGTGGGTACCCAGGT +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLSLCGK*SGGYPG
Trigger: ACCTGGGTACCCACCACTGCATTTGCCACAAAGGCT...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCATCTCCCGTGCTTTTaGACACAGCATAAGGACTGC +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAHLPCF*TQHKDC
Trigger: GCAGTCCTTATGCTGTGTGCAAAAGCACGGGAGATG...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAACAGGTCTGCCACTGTaGACACACGGCCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKTGLPL*THGHPL
Trigger: AAGGGGATGGCCGTGTGTGCACAGTGGCAGACCTGT...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATCTGTCCCCACCTGGCTaGAGTTGGCATGCTTACTGC +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNLSPPG*SWHAYC
Trigger: GCAGTAAGCATGCCAACTGCAGCCAGGTGGGGACAG...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCACAGAAGTATCTTCTCTaGGAAATTCCGAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSQKYLL*EIPRPA
Trigger: GGCTGGTCTCGGAATTTCCCAGAGAAGATACTTCTG...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCTCCTTCCAGCATTCCTaGCTGCAGCCACTTAAGGAT +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLASFQHS*LQPLKD
Trigger: ATCCTTAAGTGGCTGCAGCCAGGAATGCTGGAAGGA...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAACAGACTGGGAGCTCTTaGTCACAGTGGGGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKQTGSS*SQWGPV
Trigger: TACTGGCCCCCACTGTGACCAAGAGCTCCCAGTCTG...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTGATACCCTTGTAGTCTaGAAAGCAGAGGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGDTLVV*KAEAGS
Trigger: GGAGCCTGCCTCTGCTTTCCAGACTACAAGGGTATC...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAATGGCAAATGCAGTGGTaGGTACCCAGGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKWQMQW*VPRSPG
Trigger: CCCTGGAGACCTGGGTACCCACCACTGCATTTGCCA...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTTTCTGGCAGCATCTTTaGCTGCAACCAGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGFWQHL*LQPEGL
Trigger: CAGGCCTTCTGGTTGCAGCCAAAGATGCTGCCAGAA...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGGCACCTGGATCTTCTTaGCACAGGTGTAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLAPGSS*HRCRNS
Trigger: GCTGTTCCTACACCTGTGCCAAGAAGATCCAGGTGC...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGGGATGCAGTTGGCATTaGGATCGCACTTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLGCSWH*DRTSWD
Trigger: GTCCCAAGAAGTGCGATCCCAATGCCAACTGCATCC...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAGCCCAGGAGCCACCTTaGTACAGTTGGCATAGGGTG +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKAQEPP*YSWHRV
Trigger: CACCCTATGCCAACTGTACCAAGGTGGCTCCTGGGC...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGGTGGCCTGGATGTaGAAGACACCAGCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGLVAWM*KTPACF
Trigger: AAAACAGGCTGGTGTCTTCCACATCCAGGCCACCAG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAAACCAGGGTTGGGCTaGTCCCTTCTTGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKKPGLG*SLLAMG
Trigger: CCCCATGGCAAGAAGGGACCAGCCCAACCCTGGTTT...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR TCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTATGTTGCGAATCATATaGCCCCGCAAAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGMLRII*PRKMAA
Trigger: GGCAGCCATTTTGCGGGGTCATATGATTCGCAACAT...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGGTCCTCCTCCAGGACTaGATCATCAAAGGGTTCACA +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLVLLQD*IIKGFT
Trigger: TGTGAACCCTTTGATGATTCAGTCCTGGAGGAGGAC...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR GCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAACCCCAGGGACATAGTTaGCTCCTGATAGCTGCACAC +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKPQGHS*LLIAAH
Trigger: GTGTGCAGCTATCAGGAGGCAACTATGTCCCTGGGG...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAGCATTCTCCAGCATGTaGTCCCCTGCGATGACATGC +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKAFSSM*SPAMTC
Trigger: GCATGTCATCGCAGGGGAGCACATGCTGGAGAATGC...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCAAGTTTGGAAAGGCCTaGTGTGAAAAGGTAGATCAG +
Preference number: 4 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATKFGKA*CEKVDQ
Trigger: CTGATCTACCTTTTCACAGCAGGCCTTTCCAAACTT...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAACCCAGCACAGTCTGGTaGTGCTCTTCATCACAGTGC +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKPSTVW*CSSSQC
Trigger: GCACTGTGATGAAGAGCAGCACCAGACTGTGCTGGG...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAAAGGATTGCTGCGTTTaGAGGAGAAGCCATTACCTT +
Preference number: 4 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSKDCCV*RRSHYL
Trigger: AAGGTAATGGCTTCTCCTGCAAACGCAGCAATCCTT...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCGGAAATGTAGGTCAGTaGACAAAGCATCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAGNVGQ*TKHQCG
Trigger: GCCACACTGATGCTTTGTGCACTGACCTACATTTCC...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGCCTCTGCAGAGCACTaGGAATTCTGGGGGCATTTC +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNASAEH*EFWGHF
Trigger: GAAATGCCCCCAGAATTCCCAGTGCTCTGCAGAGGC...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTTTTTGCACACGCAGCTaGTCTTTCTGTCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGFCTRS*SFCQGS
Trigger: TGACCCCTGACAGAAAGACCAGCTGCGTGTGCAAAA...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGTCGCATTCATGTTACTaGAGACAGAGGAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQSHSCY*RQRRQR
Trigger: TCTCTGTCTCCTCTGTCTCCAGTAACATGAATGCGA...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAATTTCTTGGAGTCCCCTaGAAGTGGGGGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKFLGVP*KWGWKL
Trigger: CAGCTTCCACCCCCACTTCCAGGGGACTCCAAGAAA...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAATGCCTTCCAGCATGTaGATCACACCGTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKMPSSM*ITPLAA
Trigger: GGCTGCCAACGGTGTGATCCACATGCTGGAAGGCAT...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAGCCCACATTCATCGATaGCCACACAGATGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKAHIHR*PHRCGH
Trigger: ATGGCCGCATCTGTGTGGCCATCGATGAATGTGGGC...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGGAATTCTTGAACCACTaGGAGAAGGCAGAGAAATGG +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQEFLNH*EKAEKW
Trigger: CCATTTCTCTGCCTTCTCCCAGTGGTTCAAGAATTC...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTTATGACCCCGCAAAATaGCTGCCAGTTTGTCACGGT +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGYDPAK*LPVCHG
Trigger: ACCGTGACAAACTGGCAGCCATTTTGCGGGGTCATA...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGACCATAAGGGCCACTaGTGGCCTGGATGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNDHKGH*WPGCGR
Trigger: TCTTCCACATCCAGGCCACCAGTGGCCCTTATGGTC...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAGCATCCCATAGAAGGTaGAGAAGTTGGCAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKASHRR*RSWQWR
Trigger: CCGCCACTGCCAACTTCTCCACCTTCTATGGGATGC...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATAGAGAAGCTGAAACCTaGAGGTTTGCCTCGGGCACG +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNREAET*RFASGT
Trigger: CGTGCCCGAGGCAAACCTCCAGGTTTCAGCTTCTCT...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGTGCCAAAAACAGGGTTaGGGACAGAAACCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLCQKQG*GQKPGL
Trigger: CAACCCTGGTTTCTGTCCCCAACCCTGTTTTTGGCA...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR TCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCAGGAAGAGTGATGCTTaGATTCTTGAACCACTGGGA +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLARKSDA*ILEPLG
Trigger: TCCCAGTGGTTCAAGAATTCAAGCATCACTCTTCCT...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGCCACAAAGCCTTTGTTaGCAGGAACGAAGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLPQSLC*QERRVS
Trigger: AGACACTCTTCGTTCCTGTCAACAAAGGCTTTGTGG...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGAAGAGGCTAAGACCTaGGTGGGCAGGAAGCAATGT +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNEEAKT*VGRKQC
Trigger: ACATTGCTTCCTGCCCACTCAGGTCTTAGCCTCTTC...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGAGAGAAATGGGCATTTaGCTCCAGTTCCTGGATAAT +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQREMGI*LQFLDN
Trigger: ATTATCCAGGAACTGGAGGCAAATGCCCATTTCTCT...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGCGCATTGAGATGGAGTaGAATGGAGTTGTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLRIEME*NGVVQN
Trigger: GTTCTGGACAACTCCATTGCACTCCATCTCAATGCG...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCGTCTGCATTATCTTCTaGCTGAAAGGCAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAVCIIF*LKGREA
Trigger: AGCTTCTCTGCCTTTCAGGCAGAAGATAATGCAGAC...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATTTCACAGTCAGGACCTaGTTGGCCATGGTGAGGACA +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNFTVRT*LAMVRT
Trigger: TGTCCTCACCATGGCCAACCAGGTCCTGACTGTGAA...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTACCCACAGTTTCCCATaGATTCATTGCAGAATCGGC +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGTHSFP*IHCRIG
Trigger: GCCGATTCTGCAATGAATCCATGGGAAACTGTGGGT...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATCTGCATGTCACCTCTTaGAGGCAACAAGACCTGGCT +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNLHVTS*RQQDLA
Trigger: AGCCAGGTCTTGTTGCCTCCAAGAGGTGACATGCAG...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCCAGAGAGTGATTTGTaGGCACAAAGATGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGPESDL*AQRWCR
Trigger: CCTACACCATCTTTGTGCCCACAAATCACTCTCTGG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAATCCTGGCACAGCCCATaGTCACAGTCACATACTCCA +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKSWHSP*SQSHTP
Trigger: TGGAGTATGTGACTGTGACCATGGGCTGTGCCAGGA...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR TCA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGGCATTATCTTCTGCCTaGAAGGCAGAGAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLALSSA*KAEKLK
Trigger: TTTCAGCTTCTCTGCCTTTCAGGCAGAAGATAATGC...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGCTCCAGCCCACAGATaGTGCAAGTCTTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNAPAHR*CKSSFG
Trigger: TCCAAATGAAGACTTGCAGCATCTGTGGGCTGGAGC...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCACAAAAGATGTCACTaGTGCCAAAAACAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGHKRCH*CQKQGW
Trigger: CCAACCCTGTTTTTGGCAGCAGTGACATCTTTTGTG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAATTGTGGGCACAAAGATaGTGTAGGCTTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKLWAQR*CRLWQP
Trigger: AGGCTGCCAAAGCCTACACCATCTTTGTGCCCACAA...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAACGCAGGAGAAAGAGATaGTGTTTCCGTGCATGGTTC +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKRRRKR*CFRAWF
Trigger: GAACCATGCACGGAAACACCATCTCTTTCTCCTGCG...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATTCCGGGTACAGTTTATaGATTTCTCCCGAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNSGYSL*ISPEEP
Trigger: AGGCTCTTCGGGAGAAATGCATAAACTGTACCCGGA...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGTATAAACGCACTCCTTaGGGAAGATATCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQYKRTP*GRYPFS
Trigger: TGAAAATGGATATCTTCCCCAAGGAGTGCGTTTATA...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGTGACAAACTTGGTGTaGATGTCGCAACGTTTAGAC +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNVTNLV*MSQRLD
Trigger: GTCTAAACGTTGCGACATCCACACCAAGTTTGTCAC...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAACGTTGAGCCCATTTaGGTCGTGGATATAAACGCA +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKNVEPI*VVDINA
Trigger: TGCGTTTATATCCACGACCCAAATGGGCTCAACGTT...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATAGTCTTCATTTGGAGTaGCTGAGGTTCAAAGCGATC +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNSLHLE*LRFKAI
Trigger: GATCGCTTTGAACCTCAGCCACTCCAAATGAAGACT...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CCA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAGTAGAAGCAAGTATCTaGCCAACAGTTTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKVEASI*PTVFLE
Trigger: CTCCAAGAAAACTGTTGGCCAGATACTTGCTTCTAC...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR GCA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATCATCCTGTGACATGTTaGTTATTAAGTCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNHPVTC*LLSQHV
Trigger: CACATGCTGACTTAATAAGCAACATGTCACAGGATG...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CTCCTGGCCAGCCAGCGTCCACCACCTGCGTGTGCTTGGGGGCCCTaGATTCTCCAGCATGTGCTCCCCTGCGATGACATGCTGTCGGCA +
Preference number: 5 (lower is better)
Translates to: LLASQRPPPACAWGP*ILQHVLPCDDMLSA
Trigger: TGCCGACAGCATGTCATCGCAGGGGAGCACATGCTGGAGAATGCAGGGCCCCCAAGCACACGCAGGTGGTGGACGCTGGCTGGCCAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CCGAAGAGCCTCTGCGTGGCTGTGCAGGCAACGGCTGGAGCCCACTaGCAAGATCCCCGACAGTCCGAAGAGGGAGCTGCCAGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: PKSLCVAVQATAGAH*QDPRQSEEGAARSF
Trigger: GAAGCTCCTGGCAGCTCCCTCTTCGGACTGTCGGGGATCTTGGCAGTGGGCTCCAGCCGTTGCCTGCACAGCCACGCAGAGGCTCTTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CAGGCTGCACTCACAGCTGTTGCCCAGACGGCACACGGCCTGGGGTaGACACGGTGGGGTGCACACAGGCTGCAACTCCAGCTGCACTTC +
Preference number: 5 (lower is better)
Translates to: QAALTAVAQTAHGLG*TRWGAHRLQLQLHF
Trigger: GAAGTGCAGCTGGAGTTGCAGCCTGTGTGCACCCCACCGTGTGCACCCCAGGCCGTGTGCCGTCTGGGCAACAGCTGTGAGTGCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp GGTCTGCCACTGTGCACACACGGCCATCCCCTTCATAGCCCAGGCTaGACTCACAGCTGTTGCCCAGACGGCACACGGCCTGGGGTGCAC +
Preference number: 5 (lower is better)
Translates to: GLPLCTHGHPLHSPG*THSCCPDGTRPGVH
Trigger: GTGCACCCCAGGCCGTGTGCCGTCTGGGCAACAGCTGTGAGTGCAGCCTGGGCTATGAAGGGGATGGCCGTGTGTGCACAGTGGCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 90 bp CCATCATGGCAGACGCACCTGGCAACACCCTCCTGGATAACACAGTaGGCGTCCGAGTGGCAGGGCTGGGCCAGCCCTGTGGACCCACAG +
Preference number: 5 (lower is better)
Translates to: PSWQTHLATPSWITQ*ASEWQGWASPVDPQ
Trigger: CTGTGGGTCCACAGGGCTGGCCCAGCCCTGCCACTCGGACGCTCACTGTGTTATCCAGGAGGGTGTTGCCAGGTGCGTCTGCCATGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp GGCCGTGGCAGCCGCCATTGCCCACCCGACAGGGGTCAATGGGGCTaGACTCGTAGCCATTTCCAGCGAAGCCCAGCTTACACGTGCATC +
Preference number: 5 (lower is better)
Translates to: GRGSRHCPPDRGQWG*TRSHFQRSPAYTCI
Trigger: GATGCACGTGTAAGCTGGGCTTCGCTGGAAATGGCTACGAGTGCAGCCCCATTGACCCCTGTCGGGTGGGCAATGGCGGCTGCCACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp GATGGTGACCTCCTGGCCAGCCAGCGTCCACCACCTGCGTGTGCTTaGGGGCCCTGCATTCTCCAGCATGTGCTCCCCTGCGATGACATG +
Preference number: 5 (lower is better)
Translates to: DGDLLASQRPPPACA*GPCILQHVLPCDDM
Trigger: CATGTCATCGCAGGGGAGCACATGCTGGAGAATGCAGGGCCCCCAAGCACACGCAGGTGGTGGACGCTGGCTGGCCAGGAGGTCACCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp CCTGGCAGGTGCATGTCCGCTGCCCAGGAGCCACCTTGGTACAGTTaGCATAGGGTGAGCAGCCCCCATGGCCAGAGGCACAGGGATCCA +
Preference number: 5 (lower is better)
Translates to: PGRCMSAAQEPPWYS*HRVSSPHGQRHRDP
Trigger: TGGATCCCTGTGCCTCTGGCCATGGGGGCTGCTCACCCTATGCCAACTGTACCAAGGTGGCTCCTGGGCAGCGGACATGCACCTGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 90 bp CAGGAGGCAAGGCTTGCAGGGCAGAATCTGTGGGCCACAGCATCGTaGAGGGGCGATGGGACGCATCCTGAAGCATGGGCAGGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: QEARLAGQNLWATAS*RGDGTHPEAWAGGQ
Trigger: CTGGCCTCCTGCCCATGCTTCAGGATGCGTCCCATCGCCCCTTCACGATGCTGTGGCCCACAGATTCTGCCCTGCAAGCCTTGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 90 bp TGGCAGTGGCGGCCAAGACATCAAGCAGTTTCCCGTTGCACGTGCTaGTCCCGTCACCCACGAAGCCGGCCCGACACTGGCAAGCCACGT +
Preference number: 5 (lower is better)
Translates to: WQWRPRHQAVSRCTC*SRHPRSRPDTGKPR
Trigger: ACGTGGCTTGCCAGTGTCGGGCCGGCTTCGTGGGTGACGGGATCAGCACGTGCAACGGGAAACTGCTTGATGTCTTGGCCGCCACTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CCTGCGTGTGCTTGGGGGCCCTGCATTCTCCAGCATGTGCTCCCCTaGGATGACATGCTGTCGGCAGAGCTGCTGAGCCAGCGTCGCATT +
Preference number: 5 (lower is better)
Translates to: PACAWGPCILQHVLP*DDMLSAELLSQRRI
Trigger: AATGCGACGCTGGCTCAGCAGCTCTGCCGACAGCATGTCATCGCAGGGGAGCACATGCTGGAGAATGCAGGGCCCCCAAGCACACGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp GGATCACACCGTTGGCAGCCGGCACATCGACCCTCCGCACAGGGATaGCCTCCGGTCCCAGCAGGATGCGTCCCTCCTCAGAGATATTCA +
Preference number: 5 (lower is better)
Translates to: GSHRWQPAHRPSAQG*PPVPAGCVPPQRYS
Trigger: TGAATATCTCTGAGGAGGGACGCATCCTGCTGGGACCGGAGGGCATCCCTGTGCGGAGGGTCGATGTGCCGGCTGCCAACGGTGTGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp TGTGATTGTAGAAGACCAGCCAGTGGGCAGGGCCCAGGAGGGAGTTaGGGTGTCCCCCTTTCCGCAGGACCTCCACAGAGAGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: CDCRRPASGQGPGGS*GVPLSAGPPQRVPP
Trigger: GGGAGGCACTCTCTGTGGAGGTCCTGCGGAAAGGGGGACACCGCAACTCCCTCCTGGGCCCTGCCCACTGGCTGGTCTTCTACAATCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp TGTAGCCATCCTGGCAGGTGCATGTCCGCTGCCCAGGAGCCACCTTaGTACAGTTGGCATAGGGTGAGCAGCCCCCATGGCCAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: CSHPGRCMSAAQEPP*YSWHRVSSPHGQRH
Trigger: GTGCCTCTGGCCATGGGGGCTGCTCACCCTATGCCAACTGTACCAAGGTGGCTCCTGGGCAGCGGACATGCACCTGCCAGGATGGCTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 90 bp GAATCTGTGGGCCACAGCATCGTGAAGGGGCGATGGGACGCATCCTaGAGCATGGGCAGGAGGCCAGCCACCGTCAATAGGCGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: ESVGHSIVKGRWDAS*SMGRRPATVNRRLK
Trigger: CTTCAGCCGCCTATTGACGGTGGCTGGCCTCCTGCCCATGCTTCAGGATGCGTCCCATCGCCCCTTCACGATGCTGTGGCCCACAGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp TCTTGGCAGCGACATTCCCCATTGCCCAGGAATCTGTCTTGGCACTaGCCATGGCCTGAGCACACTCCACCAAGACCCCCTGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SWQRHSPLPRNLSWH*PWPEHTPPRPPGQG
Trigger: GCCCTGCCCAGGGGGTCTTGGTGGAGTGTGCTCAGGCCATGGGCAGTGCCAAGACAGATTCCTGGGCAATGGGGAATGTCGCTGCCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp ACTGTCCCCACCTGGCTGCAGTTGGCATGCTTACTGCAGCCACCATaGCCCTTCTGGCACAGGTCTGCCACTGTGCACACACGGCCATCC +
Preference number: 5 (lower is better)
Translates to: TVPTWLQLACLLQPP*PFWHRSATVHTRPS
Trigger: GGATGGCCGTGTGTGCACAGTGGCAGACCTGTGCCAGAAGGGGCATGGTGGCTGCAGTAAGCATGCCAACTGCAGCCAGGTGGGGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CATTCACAGCGCCGTGTGTTCGGACCGGTATTGAGGCAGTCAGCGTaGTCGCTGCAACCTCCACGGTGGCCATCCAAGCAGGGGTCTCGA +
Preference number: 5 (lower is better)
Translates to: HSQRRVFGPVLRQSA*SLQPPRWPSKQGSR
Trigger: TCGAGACCCCTGCTTGGATGGCCACCGTGGAGGTTGCAGCGAGCACGCTGACTGCCTCAATACCGGTCCGAACACACGGCGCTGTGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCGGGCAGCCACCAAAGTaGGTGAGGCAAGGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATGQPPK*VRQGSR
Trigger: CCGGGACCCTTGCCTCACCAACTTTGGTGGCTGCCC...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 90 bp GTGTGCTTGGGGGCCCTGCATTCTCCAGCATGTGCTCCCCTGCGATaGCATGCTGTCGGCAGAGCTGCTGAGCCAGCGTCGCATTCATGT +
Preference number: 5 (lower is better)
Translates to: VCLGALHSPACAPLR*HAVGRAAEPASHSC
Trigger: ACATGAATGCGACGCTGGCTCAGCAGCTCTGCCGACAGCATGTCATCGCAGGGGAGCACATGCTGGAGAATGCAGGGCCCCCAAGCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CCCTGGAGAAAATGGGCCCTGGCCAGTTCTGGCAGCATCTTTGGCTaGAACCAGAAGGCCTGGTCCTCGAGGCTCAGTCTACGGATGGCG +
Preference number: 5 (lower is better)
Translates to: PWRKWALASSGSIFG*NQKAWSSRLSLRMA
Trigger: CGCCATCCGTAGACTGAGCCTCGAGGACCAGGCCTTCTGGTTGCAGCCAAAGATGCTGCCAGAACTGGCCAGGGCCCATTTTCTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp GAGGGAGTTGCGGTGTCCCCCTTTCCGCAGGACCTCCACAGAGAGTaGCTCCCCAAGGATCACGTGATGTCGCACCGTGTCTATACCCAG +
Preference number: 5 (lower is better)
Translates to: EGVAVSPFPQDLHRE*LPKDHVMSHRVYTQ
Trigger: CTGGGTATAGACACGGTGCGACATCACGTGATCCTTGGGGAGGCACTCTCTGTGGAGGTCCTGCGGAAAGGGGGACACCGCAACTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CATGGCCAGAGGCACAGGGATCCACCTCTGAGCAATAGCTGCCGTTaGCCGAGTATCCTGCAGCACAGACGCAGGCAGGGATTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: HGQRHRDPPLSNSCR*PSILQHRRRQGFQQ
Trigger: CTGCTGGAATCCCTGCCTGCGTCTGTGCTGCAGGATACTCGGGCAACGGCAGCTATTGCTCAGAGGTGGATCCCTGTGCCTCTGGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp AGGCAGGTGCAAGTGACCACTGTCCCCACCTGGCTGCAGTTGGCATaGTTACTGCAGCCACCATGCCCCTTCTGGCACAGGTCTGCCACT +
Preference number: 5 (lower is better)
Translates to: RQVQVTTVPTWLQLA*LLQPPCPFWHRSAT
Trigger: AGTGGCAGACCTGTGCCAGAAGGGGCATGGTGGCTGCAGTAAGCATGCCAACTGCAGCCAGGTGGGGACAGTGGTCACTTGCACCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp TCATTGCAGAATCGGCCTTGGAAGCCAGGGGCACATGTACCCTGCTaGCACACCCCTCCACTGCCAGGACGGTTGTCACACAGACCGTGG +
Preference number: 5 (lower is better)
Translates to: SLQNRPWKPGAHVPC*HTPPLPGRLSHRPW
Trigger: CCACGGTCTGTGTGACAACCGTCCTGGCAGTGGAGGGGTGTGCCAGCAGGGTACATGTGCCCCTGGCTTCCAAGGCCGATTCTGCAATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp CCGAGTGGCAGGGCTGGGCCAGCCCTGTGGACCCACAGTTTCCCATaGATTCATTGCAGAATCGGCCTTGGAAGCCAGGGGCACATGTAC +
Preference number: 5 (lower is better)
Translates to: PSGRAGPALWTHSFP*IHCRIGLGSQGHMY
Trigger: GTACATGTGCCCCTGGCTTCCAAGGCCGATTCTGCAATGAATCCATGGGAAACTGTGGGTCCACAGGGCTGGCCCAGCCCTGCCACTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp AAGCAGGAGCCAGAGCCCCCAAGACCTTCATCACAACGGCCATGTTaGGTACAGCGGCAAGCTTGGCACTGGGGTCCAAAGGCACCTGGG +
Preference number: 5 (lower is better)
Translates to: KQEPEPPRPSSQRPC*VQRQAWHWGPKAPG
Trigger: CCCAGGTGCCTTTGGACCCCAGTGCCAAGCTTGCCGCTGTACCCAACATGGCCGTTGTGATGAAGGTCTTGGGGGCTCTGGCTCCTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS-3UTR CAA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCGCAGACTGGGAGCTCTaGGTCACAGTGGGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATADWEL*VTVGAS
Trigger: ACTGGCCCCCACTGTGACCAAGAGCTCCCAGTCTGC...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCCGTGGCAGCCGCCATaGCCCACCCGACAGGGGTCA +
Preference number: 5 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGPWQPP*PTRQGS
Trigger: TGACCCCTGTCGGGTGGGCAATGGCGGCTGCCACGG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCTGGGCAGCAGAGCCGTaGGCCAACCAGCCCACGAAG +
Preference number: 5 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSAWAAEP*ANQPTK
Trigger: CTTCGTGGGCTGGTTGGCCAACGGCTCTGCTGCCCA...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp GATTCATTGCAGAATCGGCCTTGGAAGCCAGGGGCACATGTACCCTaGTGGCACACCCCTCCACTGCCAGGACGGTTGTCACACAGACCG +
Preference number: 5 (lower is better)
Translates to: DSLQNRPWKPGAHVP*WHTPPLPGRLSHRP
Trigger: CGGTCTGTGTGACAACCGTCCTGGCAGTGGAGGGGTGTGCCAGCAGGGTACATGTGCCCCTGGCTTCCAAGGCCGATTCTGCAATGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CACAGGCTGTCCCATGGAACCCCTCTTGGCAGCGACATTCCCCATTaGCCAGGAATCTGTCTTGGCACTGCCCATGGCCTGAGCACACTC +
Preference number: 5 (lower is better)
Translates to: HRLSHGTPLGSDIPH*PGICLGTAHGLSTL
Trigger: GAGTGTGCTCAGGCCATGGGCAGTGCCAAGACAGATTCCTGGGCAATGGGGAATGTCGCTGCCAAGAGGGGTTCCATGGGACAGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp TTTCCTGGCATAGCTCTCCATCGCCCGTGTAGCCATCCTGGCAGGTaGATGTCCGCTGCCCAGGAGCCACCTTGGTACAGTTGGCATAGG +
Preference number: 5 (lower is better)
Translates to: FPGIALHRPCSHPGR*MSAAQEPPWYSWHR
Trigger: CCTATGCCAACTGTACCAAGGTGGCTCCTGGGCAGCGGACATGCACCTGCCAGGATGGCTACACGGGCGATGGAGAGCTATGCCAGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp TCACCAGGCCGGGTGAGACCGCAGGAGAAAGAGATGGTGTTTCCGTaGATGGTTCGGAGTTGGCCCAGGTTGGGTAGGTCAGACGCCAAG +
Preference number: 5 (lower is better)
Translates to: SPGRVRPQEKEMVFP*MVRSWPRLGRSDAK
Trigger: CTTGGCGTCTGACCTACCCAACCTGGGCCAACTCCGAACCATGCACGGAAACACCATCTCTTTCTCCTGCGGTCTCACCCGGCCTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp GGCACCCTGGAGAAAATGGGCCCTGGCCAGTTCTGGCAGCATCTTTaGCTGCAACCAGAAGGCCTGGTCCTCGAGGCTCAGTCTACGGAT +
Preference number: 5 (lower is better)
Translates to: GTLEKMGPGQFWQHL*LQPEGLVLEAQSTD
Trigger: ATCCGTAGACTGAGCCTCGAGGACCAGGCCTTCTGGTTGCAGCCAAAGATGCTGCCAGAACTGGCCAGGGCCCATTTTCTCCAGGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp ATGTTGGGTACAGCGGCAAGCTTGGCACTGGGGTCCAAAGGCACCTaGGGCACAGAGTTCACAGGCTGTCCCAGCAAAACCCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: MLGTAASLALGSKGT*GTEFTGCPSKTRMA
Trigger: TGCCATCCGGGTTTTGCTGGGACAGCCTGTGAACTCTGTGCCCCAGGTGCCTTTGGACCCCAGTGCCAAGCTTGCCGCTGTACCCAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS CCA 90 bp CCCAAGGCTAACTACACCTACACGATTATTACCACAGTCTGCCGCTaGGGTGACGACAGGGTGGGCAGCAGAGCCGTTGGCCAACCAGCC +
Preference number: 5 (lower is better)
Translates to: PKANYTYTIITTVCR*GDDRVGSRAVGQPA
Trigger: GGCTGGTTGGCCAACGGCTCTGCTGCCCACCCTGTCGTCACCCCAGCGGCAGACTGTGGTAATAATCGTGTAGGTGTAGTTAGCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCATATCCGGGCAGGCACTaGCAGGTGGGTGCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSYPGRH*QVGASA
Trigger: TGCAGAGGCACCCACCTGCAAGTGCCTGCCCGGATA...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCACCTGCGTGTGCTaGGGGGCCCTGCATTCTCCA +
Preference number: 5 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSATTCVC*GALHSP
Trigger: TGGAGAATGCAGGGCCCCCAAGCACACGCAGGTGGT...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 90 bp GCAGATGGCTGGCAGGGGTCAGGAGCAAGACAAACATTGTCTTGCTaGGTGTATCCGGGCAGGCACTTGCAGGTGGGTGCCTCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: ADGWQGSGARQTLSC*VYPGRHLQVGASAE
Trigger: CTCTGCAGAGGCACCCACCTGCAAGTGCCTGCCCGGATACACTCAGCAAGACAATGTTTGTCTTGCTCCTGACCCCTGCCAGCCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp TGGCCACACAGATGCGGCCATCCCCACTCCAGCCTTTGTGGCAAATaGAGTGGTGGGTACCCAGGTCTCCAGGGACACATTCAGCGTTCT +
Preference number: 5 (lower is better)
Translates to: WPHRCGHPHSSLCGK*SGGYPGLQGHIQRS
Trigger: AGAACGCTGAATGTGTCCCTGGAGACCTGGGTACCCACCACTGCATTTGCCACAAAGGCTGGAGTGGGGATGGCCGCATCTGTGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp TTTAGCTGCTCTCCGAAGAGGCGAAAGGCAGGCACACTATCTAGTTaGTGCAGCAACCCGGGCCCGGTCTGCATGTCACCTCTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: FSCSPKRRKAGTLSS*CSNPGPVCMSPLGG
Trigger: GCCTCCAAGAGGTGACATGCAGACCGGGCCCGGGTTGCTGCAGCAACTAGATAGTGTGCCTGCCTTTCGCCTCTTCGGAGAGCAGCTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp GATCACAGCGGGCGCCAAGGTCAGGTGGCTCCAGCAGCTGGTCAATaGCATAAGCCAGGCCACCTTCAAAGGTCAAGTGCCGTTGCACAA +
Preference number: 5 (lower is better)
Translates to: DHSGRQGQVAPAAGQ*HKPGHLQRSSAVAQ
Trigger: TTGTGCAACGGCACTTGACCTTTGAAGGTGGCCTGGCTTATGGCATTGACCAGCTGCTGGAGCCACCTGACCTTGGCGCCCGCTGTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp ACGGACCCCAAGGCTAACTACACCTACACGATTATTACCACAGTCTaGCGCTGGGGTGACGACAGGGTGGGCAGCAGAGCCGTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: TDPKANYTYTIITTV*RWGDDRVGSRAVGQ
Trigger: TTGGCCAACGGCTCTGCTGCCCACCCTGTCGTCACCCCAGCGGCAGACTGTGGTAATAATCGTGTAGGTGTAGTTAGCCTTGGGGTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp GTTGAAAGCCATGATGTCCCACACGATGACGTGGCTAACCACAACTaGCCCCGGGGCCAGAGGAACCAGAGAAGTGTTGTCAGGGCCCGT +
Preference number: 5 (lower is better)
Translates to: VESHDVPHDDVANHN*PRGQRNQRSVVRAR
Trigger: ACGGGCCCTGACAACACTTCTCTGGTTCCTCTGGCCCCGGGGGCAGTTGTGGTTAGCCACGTCATCGTGTGGGACATCATGGCTTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp GTTAATGCTTGTCATACCTGGTCGGCACATACAGGTGGCCTTGCCTaGCCCACGGTACAGGCAGAAGGTAGAGTTGCTGGGGCAGCCACC +
Preference number: 5 (lower is better)
Translates to: VNACHTWSAHTGGLA*PTVQAEGRVAGAAT
Trigger: GGTGGCTGCCCCAGCAACTCTACCTTCTGCCTGTACCGTGGGCCAGGCAAGGCCACCTGTATGTGCCGACCAGGTATGACAAGCATTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp CCTGTGGACCCACAGTTTCCCATGGATTCATTGCAGAATCGGCCTTaGAAGCCAGGGGCACATGTACCCTGCTGGCACACCCCTCCACTG +
Preference number: 5 (lower is better)
Translates to: PVDPQFPMDSLQNRP*KPGAHVPCWHTPPL
Trigger: CAGTGGAGGGGTGTGCCAGCAGGGTACATGTGCCCCTGGCTTCCAAGGCCGATTCTGCAATGAATCCATGGGAAACTGTGGGTCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp CGACCCAGCTCACACATCTCACAGGCTGTCCCATGGAACCCCTCTTaGCAGCGACATTCCCCATTGCCCAGGAATCTGTCTTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: RPSSHISQAVPWNPS*QRHSPLPRNLSWHC
Trigger: GCAGTGCCAAGACAGATTCCTGGGCAATGGGGAATGTCGCTGCCAAGAGGGGTTCCATGGGACAGCCTGTGAGATGTGTGAGCTGGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp GAGTGGCTGAGGTTCAAAGCGATCACAGCGGGCGCCAAGGTCAGGTaGCTCCAGCAGCTGGTCAATGCCATAAGCCAGGCCACCTTCAAA +
Preference number: 5 (lower is better)
Translates to: EWLRFKAITAGAKVR*LQQLVNAISQATFK
Trigger: TTTGAAGGTGGCCTGGCTTATGGCATTGACCAGCTGCTGGAGCCACCTGACCTTGGCGCCCGCTGTGATCGCTTTGAACCTCAGCCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp ACAGGGTGGCTCCAGCCCACAGATGCTGCAAGTCTTCATTTGGAGTaGCTGAGGTTCAAAGCGATCACAGCGGGCGCCAAGGTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: TGWLQPTDAASLHLE*LRFKAITAGAKVRW
Trigger: CCACCTGACCTTGGCGCCCGCTGTGATCGCTTTGAACCTCAGCCACTCCAAATGAAGACTTGCAGCATCTGTGGGCTGGAGCCACCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp CCAAGACCTTCATCACAACGGCCATGTTGGGTACAGCGGCAAGCTTaGCACTGGGGTCCAAAGGCACCTGGGGCACAGAGTTCACAGGCT +
Preference number: 5 (lower is better)
Translates to: PRPSSQRPCWVQRQA*HWGPKAPGAQSSQA
Trigger: AGCCTGTGAACTCTGTGCCCCAGGTGCCTTTGGACCCCAGTGCCAAGCTTGCCGCTGTACCCAACATGGCCGTTGTGATGAAGGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS-3UTR CAA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCTCGCAGGAATGTGGTTaGCAGGAGACATGGCACCCC +
Preference number: 5 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATSQECG*QETWHP
Trigger: GGGGTGCCATGTCTCCTGCAAACCACATTCCTGCGA...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAGGGCCCAGGAGGGAGTaGCGGTGTCCCCCTTTCCGC +
Preference number: 5 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKGPRRE*RCPPFR
Trigger: GCGGAAAGGGGGACACCGCAACTCCCTCCTGGGCCC...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGCTGCACTCACAGCTGTaGCCCAGACGGCACACGGCC +
Preference number: 5 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLLHSQL*PRRHTA
Trigger: GGCCGTGTGCCGTCTGGGCAACAGCTGTGAGTGCAG...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 90 bp GCAGTCAGGCCCAAATCTGTTGGGGTCTCGGCACTCCTGGCAGACTaGACCGCTGAAGTTTTCCTGGCACACACAGGTCCCGTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: AVRPKSVGVSALLAD*TAEVFLAHTGPVSF
Trigger: GAAGGAAACGGGACCTGTGTGTGCCAGGAAAACTTCAGCGGTTCAGTCTGCCAGGAGTGCCGAGACCCCAACAGATTTGGGCCTGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 90 bp TCCAGCATGTGCTCCCCTGCGATGACATGCTGTCGGCAGAGCTGCTaGGCCAGCGTCGCATTCATGTTACTGGAGACAGAGGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: SSMCSPAMTCCRQSC*ASVAFMLLETEETE
Trigger: CTCTGTCTCCTCTGTCTCCAGTAACATGAATGCGACGCTGGCTCAGCAGCTCTGCCGACAGCATGTCATCGCAGGGGAGCACATGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CTCCATTGTTCTGGGAACAGGGGTCCAGAAGCTTGCAAGTCTGAATaGCATCGCCACTGTAGCCCTCACGGCAGCTGCAGGAGACCTGCT +
Preference number: 5 (lower is better)
Translates to: LHCSGNRGPEACKSE*HRHCSPHGSCRRPA
Trigger: AGCAGGTCTCCTGCAGCTGCCGTGAGGGCTACAGTGGCGATGGCATTCAGACTTGCAAGCTTCTGGACCCCTGTTCCCAGAACAATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp AAGGACTGCAGCCTCCATTGTTCTGGGAACAGGGGTCCAGAAGCTTaGAAGTCTGAATGCCATCGCCACTGTAGCCCTCACGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KDCSLHCSGNRGPEA*KSECHRHCSPHGSC
Trigger: GCAGCTGCCGTGAGGGCTACAGTGGCGATGGCATTCAGACTTGCAAGCTTCTGGACCCCTGTTCCCAGAACAATGGAGGCTGCAGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp TCCCAGTGTAGCACATCTGGTGGCAGCAGGACGTGGTCAATGAAGTaGAGGACACCGTTCACCACCTCGAGATCGCTGCTTACCACCCGA +
Preference number: 5 (lower is better)
Translates to: SQCSTSGGSRTWSMK*RTPFTTSRSLLTTR
Trigger: TCGGGTGGTAAGCAGCGATCTCGAGGTGGTGAACGGTGTCCTGCACTTCATTGACCACGTCCTGCTGCCACCAGATGTGCTACACTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp TGGTCCTCGTGGAAGAGCCAGTTCTTTCTATCAGGAGGCAAGGCTTaGAGGGCAGAATCTGTGGGCCACAGCATCGTGAAGGGGCGATGG +
Preference number: 5 (lower is better)
Translates to: WSSWKSQFFLSGGKA*RAESVGHSIVKGRW
Trigger: CCATCGCCCCTTCACGATGCTGTGGCCCACAGATTCTGCCCTGCAAGCCTTGCCTCCTGATAGAAAGAACTGGCTCTTCCACGAGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp ACACAGATGCGGCCATCCCCACTCCAGCCTTTGTGGCAAATGCAGTaGTGGGTACCCAGGTCTCCAGGGACACATTCAGCGTTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: TQMRPSPLQPLWQMQ*WVPRSPGTHSAFSE
Trigger: CTCAGAGAACGCTGAATGTGTCCCTGGAGACCTGGGTACCCACCACTGCATTTGCCACAAAGGCTGGAGTGGGGATGGCCGCATCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp TCATCGATGGCCACACAGATGCGGCCATCCCCACTCCAGCCTTTGTaGCAAATGCAGTGGTGGGTACCCAGGTCTCCAGGGACACATTCA +
Preference number: 5 (lower is better)
Translates to: SSMATQMRPSPLQPL*QMQWWVPRSPGTHS
Trigger: TGAATGTGTCCCTGGAGACCTGGGTACCCACCACTGCATTTGCCACAAAGGCTGGAGTGGGGATGGCCGCATCTGTGTGGCCATCGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp AACCCGGGCCCGGTCTGCATGTCACCTCTTGGAGGCAACAAGACCTaGCTAACAATGTGTAGGATGCCATTGGTAGCAAGGAGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: NPGPVCMSPLGGNKT*LTMCRMPLVARRSG
Trigger: CCCCGACCTCCTTGCTACCAATGGCATCCTACACATTGTTAGCCAGGTCTTGTTGCCTCCAAGAGGTGACATGCAGACCGGGCCCGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp GCACCTGGGGCACAGAGTTCACAGGCTGTCCCAGCAAAACCCGGATaGCAATTACACTGCCCACTTCCACGTATACCATCCAGGCACACG +
Preference number: 5 (lower is better)
Translates to: APGAQSSQAVPAKPG*QLHCPLPRIPSRHT
Trigger: CGTGTGCCTGGATGGTATACGTGGAAGTGGGCAGTGTAATTGCCATCCGGGTTTTGCTGGGACAGCCTGTGAACTCTGTGCCCCAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS-3UTR CAA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCTGTCCACAGCTTCGTaGCTCGGGGCAAAGACTGTG +
Preference number: 5 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQLSTAS*LGAKTV
Trigger: CACAGTCTTTGCCCCGAGCAACGAAGCTGTGGACAG...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCGTTCTGGCAGCATCTTaGGCTGCAACCAGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATVLAAS*AATRRP
Trigger: AGGCCTTCTGGTTGCAGCCAAAGATGCTGCCAGAAC...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGCAGCTGGAAGCCTaGAGTACAGCGGAATTTCCG +
Preference number: 5 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATLQLEA*STAEFP
Trigger: CGGAAATTCCGCTGTACTCAAGGCTTCCAGCTGCAG...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp TCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCGAGTCCTGGATGCAGTaGGCATTGGGATCGCACTTC +
Preference number: 5 (lower is better)
Translates to: SAEGTFIVLDRPLAPSATESWMQ*ALGSHF
Trigger: GAAGTGCGATCCCAATGCCAACTGCATCCAGGACTC...GGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp CCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGATCAGGAGGCAAGGCTaGCAGGGCAGAATCTGTGGG +
Preference number: 5 (lower is better)
Translates to: PHPLRALLLSWTDHWPPQIRRQG*QGRICG
Trigger: CCCACAGATTCTGCCCTGCAAGCCTTGCCTCCTGAT...CTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 90 bp CAGACTCCCAGTGTAGCACATCTGGTGGCAGCAGGACGTGGTCAATaGAGTGCAGGACACCGTTCACCACCTCGAGATCGCTGCTTACCA +
Preference number: 5 (lower is better)
Translates to: QTPSVAHLVAAGRGQ*SAGHRSPPRDRCLP
Trigger: TGGTAAGCAGCGATCTCGAGGTGGTGAACGGTGTCCTGCACTTCATTGACCACGTCCTGCTGCCACCAGATGTGCTACACTGGGAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CAGCGTTCTCTGAGCAGCCACCACGGTCTGGGCGCGAGCAAGGATTaGTGCGTTTGCAGGAGAAGCCATTACCTTCAAAACCATCATGGC +
Preference number: 5 (lower is better)
Translates to: QRSLSSHHGLGASKD*CVCRRSHYLQNHHG
Trigger: GCCATGATGGTTTTGAAGGTAATGGCTTCTCCTGCAAACGCAGCAATCCTTGCTCGCGCCCAGACCGTGGTGGCTGCTCAGAGAACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp GCAGCTGGAAGCCTTGAGTACAGCGGAATTTCCGGGTACAGTTTATaGATTTCTCCCGAAGAGCCTCTGCGTGGCTGTGCAGGCAACGGC +
Preference number: 5 (lower is better)
Translates to: AAGSLEYSGISGYSL*ISPEEPLRGCAGNG
Trigger: GCCGTTGCCTGCACAGCCACGCAGAGGCTCTTCGGGAGAAATGCATAAACTGTACCCGGAAATTCCGCTGTACTCAAGGCTTCCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp TCCAACTCTCCCATGACAGGTGATGCCGTCCCCCACAGTATGTGTTaGGTCACAGGAACACGTCCTCTGGCCATCTCCCGTGCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: SNSPMTGDAVPHSMC*VTGTRPLAISRAFA
Trigger: TGCAAAAGCACGGGAGATGGCCAGAGGACGTGTTCCTGTGACGCAACACATACTGTGGGGGACGGCATCACCTGTCATGGGAGAGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp GACATGGCACCCCTCAGAAGCGTTGTTGTTAATGCTTGTCATACCTaGTCGGCACATACAGGTGGCCTTGCCTGGCCCACGGTACAGGCA +
Preference number: 5 (lower is better)
Translates to: DMAPLRSVVVNACHT*SAHTGGLAWPTVQA
Trigger: TGCCTGTACCGTGGGCCAGGCAAGGCCACCTGTATGTGCCGACCAGGTATGACAAGCATTAACAACAACGCTTCTGAGGGGTGCCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp GCTCGGGGCAAAGACTGTGAAGGGCCCAGGCCCATCCAGGATAGATaGCAGCCCACAGTTCTCCAGGATCGTTTCAAACCGTGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: ARGKDCEGPRPIQDR*QPTVLQDRFKPCEN
Trigger: GTTTTCACACGGTTTGAAACGATCCTGGAGAACTGTGGGCTGCCATCTATCCTGGATGGGCCTGGGCCCTTCACAGTCTTTGCCCCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp ATAGCACCAGACTCCCAGTGTAGCACATCTGGTGGCAGCAGGACGTaGTCAATGAAGTGCAGGACACCGTTCACCACCTCGAGATCGCTG +
Preference number: 5 (lower is better)
Translates to: IAPDSQCSTSGGSRT*SMKCRTPFTTSRSL
Trigger: CAGCGATCTCGAGGTGGTGAACGGTGTCCTGCACTTCATTGACCACGTCCTGCTGCCACCAGATGTGCTACACTGGGAGTCTGGTGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp AGACCGCAGGAGAAAGAGATGGTGTTTCCGTGCATGGTTCGGAGTTaGCCCAGGTTGGGTAGGTCAGACGCCAAGGCCTCAATGTTGCGA +
Preference number: 5 (lower is better)
Translates to: RPQEKEMVFPCMVRS*PRLGRSDAKASMLR
Trigger: TCGCAACATTGAGGCCTTGGCGTCTGACCTACCCAACCTGGGCCAACTCCGAACCATGCACGGAAACACCATCTCTTTCTCCTGCGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp TGGCATTGGCATAGCCCAGCAGCATCCCATAGAAGGTGGAGAAGTTaGCAGTGGCGGCCAAGACATCAAGCAGTTTCCCGTTGCACGTGC +
Preference number: 5 (lower is better)
Translates to: WHWHSPAASHRRWRS*QWRPRHQAVSRCTC
Trigger: GCACGTGCAACGGGAAACTGCTTGATGTCTTGGCCGCCACTGCCAACTTCTCCACCTTCTATGGGATGCTGCTGGGCTATGCCAATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp ATCGTCTGCATTATCTTCTGCCTGAAAGGCAGAGAAGCTGAAACCTaGAGGTTTGCCTCGGGCACGCAGGTAGAGAGCTCCCGCCACCAG +
Preference number: 5 (lower is better)
Translates to: IVCIIFCLKGREAET*RFASGTQVESSRHQ
Trigger: CTGGTGGCGGGAGCTCTCTACCTGCGTGCCCGAGGCAAACCTCCAGGTTTCAGCTTCTCTGCCTTTCAGGCAGAAGATAATGCAGACGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCAGGCAGAAGGTAGAGTaGCTGGGGCAGCCACCAAAG +
Preference number: 5 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLARQKVE*LGQPPK
Trigger: CTTTGGTGGCTGCCCCAGCAACTCTACCTTCTGCCT...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTATGTGGATCACACCGTaGGCAGCCGGCACATCGACC +
Preference number: 5 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGMWITP*AAGTST
Trigger: GGTCGATGTGCCGGCTGCCAACGGTGTGATCCACAT...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCATTGCAGAATCGGCCTaGGAAGCCAGGGGCACATGT +
Preference number: 5 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSAIAESA*EARGTC
Trigger: ACATGTGCCCCTGGCTTCCAAGGCCGATTCTGCAAT...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCAAAATGGCTGCCAGTTaGTCACGGTGGTCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSAKMAAS*SRWSSW
Trigger: CCACGAGGACCACCGTGACAAACTGGCAGCCATTTT...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCTCAAGCAGTTTCCCGTaGCACGTGCTGATCCCGTCA +
Preference number: 5 (lower is better)
Translates to: TSAEGTFIVLDRPLAPSASSSFP*HVLIPS
Trigger: TGACGGGATCAGCACGTGCAACGGGAAACTGCTTGA...GGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGGAACCAGAGAAGTGTaGTCAGGGCCCGTGTCACTT +
Preference number: 5 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSGTREV*SGPVSL
Trigger: AAGTGACACGGGCCCTGACAACACTTCTCTGGTTCC...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCTGGGCTGGTCCCTTCTaGCCATGGGGAGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAWAGPF*PWGEVI
Trigger: GATGACTTCTCCCCATGGCAAGAAGGGACCAGCCCA...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS TCA 90 bp TTGTGTATCTGCCAGCGTGTCGTGGCACTCAGTGTGGCTACTTGTTaGCCATTTAACCGGGCCAACTCCTCCTCTGAGAAGGCACCCTGG +
Preference number: 5 (lower is better)
Translates to: LCICQRVVALSVATC*PFNRANSSSEKAPW
Trigger: CCAGGGTGCCTTCTCAGAGGAGGAGTTGGCCCGGTTAAATGGTCAACAAGTAGCCACACTGAGTGCCACGACACGCTGGCAGATACACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 90 bp CATACTTGTTCCGTAGGAGCTCCAGTCCAACTCTCCCATGACAGGTaGTGCCGTCCCCCACAGTATGTGTTGCGTCACAGGAACACGTCC +
Preference number: 5 (lower is better)
Translates to: HTCSVGAPVQLSHDR*CRPPQYVLRHRNTS
Trigger: GGACGTGTTCCTGTGACGCAACACATACTGTGGGGGACGGCATCACCTGTCATGGGAGAGTTGGACTGGAGCTCCTACGGAACAAGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 90 bp AGGTTGGGTAGGTCAGACGCCAAGGCCTCAATGTTGCGAATCATATaGCCCCGCAAAATGGCTGCCAGTTTGTCACGGTGGTCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: RLGRSDAKASMLRII*PRKMAASLSRWSSW
Trigger: CCACGAGGACCACCGTGACAAACTGGCAGCCATTTTGCGGGGTCATATGATTCGCAACATTGAGGCCTTGGCGTCTGACCTACCCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp GTGACAAACTTGGTGTGGATGTCGCAACGTTTAGACCGTACCGTCTaGCCTCGGATGAAGCTGGAGTCTGACAGGCAGAGGACCAGGACA +
Preference number: 5 (lower is better)
Translates to: VTNLVWMSQRLDRTV*PRMKLESDRQRTRT
Trigger: TGTCCTGGTCCTCTGCCTGTCAGACTCCAGCTTCATCCGAGGGCAGACGGTACGGTCTAAACGTTGCGACATCCACACCAAGTTTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp GAGCAAGACAAACATTGTCTTGCTGAGTGTATCCGGGCAGGCACTTaGAGGTGGGTGCCTCTGCAGAGCACTGGGAATTCTGGGGGCATT +
Preference number: 5 (lower is better)
Translates to: EQDKHCLAECIRAGT*RWVPLQSTGNSGGI
Trigger: AATGCCCCCAGAATTCCCAGTGCTCTGCAGAGGCACCCACCTGCAAGTGCCTGCCCGGATACACTCAGCAAGACAATGTTTGTCTTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CGTTCTCTGAGCAGCCACCACGGTCTGGGCGCGAGCAAGGATTGCTaGGTTTGCAGGAGAAGCCATTACCTTCAAAACCATCATGGCAGA +
Preference number: 5 (lower is better)
Translates to: RSLSSHHGLGASKDC*VCRRSHYLQNHHGR
Trigger: TCTGCCATGATGGTTTTGAAGGTAATGGCTTCTCCTGCAAACGCAGCAATCCTTGCTCGCGCCCAGACCGTGGTGGCTGCTCAGAGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp AAGGCAGGCACACTATCTAGTTGCTGCAGCAACCCGGGCCCGGTCTaGATGTCACCTCTTGGAGGCAACAAGACCTGGCTAACAATGTGT +
Preference number: 5 (lower is better)
Translates to: KAGTLSSCCSNPGPV*MSPLGGNKTWLTMC
Trigger: ACACATTGTTAGCCAGGTCTTGTTGCCTCCAAGAGGTGACATGCAGACCGGGCCCGGGTTGCTGCAGCAACTAGATAGTGTGCCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp ACGTCCTCTGGCCATCTCCCGTGCTTTTGCACACAGCATAAGGACTaGAGCCTCCATTGTTCTGGGAACAGGGGTCCAGAAGCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: TSSGHLPCFCTQHKD*SLHCSGNRGPEACK
Trigger: CTTGCAAGCTTCTGGACCCCTGTTCCCAGAACAATGGAGGCTGCAGTCCTTATGCTGTGTGCAAAAGCACGGGAGATGGCCAGAGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp GTGTTGCGTCACAGGAACACGTCCTCTGGCCATCTCCCGTGCTTTTaGACACAGCATAAGGACTGCAGCCTCCATTGTTCTGGGAACAGG +
Preference number: 5 (lower is better)
Translates to: VLRHRNTSSGHLPCF*TQHKDCSLHCSGNR
Trigger: CCTGTTCCCAGAACAATGGAGGCTGCAGTCCTTATGCTGTGTGCAAAAGCACGGGAGATGGCCAGAGGACGTGTTCCTGTGACGCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp GGAGTTGGCCCAGGTTGGGTAGGTCAGACGCCAAGGCCTCAATGTTaGGAATCATATGACCCCGCAAAATGGCTGCCAGTTTGTCACGGT +
Preference number: 5 (lower is better)
Translates to: GVGPGWVGQTPRPQC*ESYDPAKWLPVCHG
Trigger: ACCGTGACAAACTGGCAGCCATTTTGCGGGGTCATATGATTCGCAACATTGAGGCCTTGGCGTCTGACCTACCCAACCTGGGCCAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CAGAGTTCACAGGCTGTCCCAGCAAAACCCGGATGGCAATTACACTaGCCACTTCCACGTATACCATCCAGGCACACGCCATGGTCACTG +
Preference number: 5 (lower is better)
Translates to: QSSQAVPAKPGWQLH*PLPRIPSRHTPWSL
Trigger: CAGTGACCATGGCGTGTGCCTGGATGGTATACGTGGAAGTGGGCAGTGTAATTGCCATCCGGGTTTTGCTGGGACAGCCTGTGAACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS CCA 90 bp GACAAACATTGTCTTGCTGAGTGTATCCGGGCAGGCACTTGCAGGTaGGTGCCTCTGCAGAGCACTGGGAATTCTGGGGGCATTTCAGAC +
Preference number: 5 (lower is better)
Translates to: DKHCLAECIRAGTCR*VPLQSTGNSGGISD
Trigger: GTCTGAAATGCCCCCAGAATTCCCAGTGCTCTGCAGAGGCACCCACCTGCAAGTGCCTGCCCGGATACACTCAGCAAGACAATGTTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp CCAGGGCAACAGCTGGGCTTCCAGACGGTGGTGACACAGTTTCGGTaGCAGCCCCTACTCATGTGGTTACGATTCCAAAAACTAGACGGT +
Preference number: 5 (lower is better)
Translates to: PGQQLGFQTVVTQFR*QPLLMWLRFQKLDG
Trigger: ACCGTCTAGTTTTTGGAATCGTAACCACATGAGTAGGGGCTGCCACCGAAACTGTGTCACCACCGTCTGGAAGCCCAGCTGTTGCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS-3UTR CAA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTTGGGCTGGTCCCTTCTaGCCATGGGGAGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGWAGPF*PWGEVI
Trigger: GATGACTTCTCCCCATGGCAAGAAGGGACCAGCCCA...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS TCA 90 bp AAGGAGGCATACTTGTTCCGTAGGAGCTCCAGTCCAACTCTCCCATaGCAGGTGATGCCGTCCCCCACAGTATGTGTTGCGTCACAGGAA +
Preference number: 5 (lower is better)
Translates to: KEAYLFRRSSSPTLP*QVMPSPTVCVASQE
Trigger: TTCCTGTGACGCAACACATACTGTGGGGGACGGCATCACCTGTCATGGGAGAGTTGGACTGGAGCTCCTACGGAACAAGTATGCCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 90 bp AGAAGTGTTGTCAGGGCCCGTGTCACTTATGAAGAGGCTAAGACCTaGGTGGGCAGGAAGCAATGTCCCCCGGCTGGCATTGATACTCAG +
Preference number: 5 (lower is better)
Translates to: RSVVRARVTYEEAKT*VGRKQCPPAGIDTQ
Trigger: CTGAGTATCAATGCCAGCCGGGGGACATTGCTTCCTGCCCACTCAGGTCTTAGCCTCTTCATAAGTGACACGGGCCCTGACAACACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp ATGCCATTGGTAGCAAGGAGGTCGGGGACATCCACAGTGGCATTCTaGACCCAGACTTTCCCACTGATGTTGTGTATCTGCCAGCGTGTC +
Preference number: 5 (lower is better)
Translates to: MPLVARRSGTSTVAF*TQTFPLMLCICQRV
Trigger: GACACGCTGGCAGATACACAACATCAGTGGGAAAGTCTGGGTGCAGAATGCCACTGTGGATGTCCCCGACCTCCTTGCTACCAATGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp ATCCTGCAGCACAGACGCAGGCAGGGATTCCAGCAGAGTCCTGGATaGAGTTGGCATTGGGATCGCACTTCTTGGGACATTGATGATCAG +
Preference number: 5 (lower is better)
Translates to: ILQHRRRQGFQQSPG*SWHWDRTSWDIDDQ
Trigger: CTGATCATCAATGTCCCAAGAAGTGCGATCCCAATGCCAACTGCATCCAGGACTCTGCTGGAATCCCTGCCTGCGTCTGTGCTGCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CAGTATGTGTTGCGTCACAGGAACACGTCCTCTGGCCATCTCCCGTaGTTTTGCACACAGCATAAGGACTGCAGCCTCCATTGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: QYVLRHRNTSSGHLP*FCTQHKDCSLHCSG
Trigger: CCCAGAACAATGGAGGCTGCAGTCCTTATGCTGTGTGCAAAAGCACGGGAGATGGCCAGAGGACGTGTTCCTGTGACGCAACACATACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 90 bp CAGGGTTGGGCTGGTCCCTTCTTGCCATGGGGAGAAGTCATCGTCTaGATTATCTTCTGCCTGAAAGGCAGAGAAGCTGAAACCTGGAGG +
Preference number: 5 (lower is better)
Translates to: QGWAGPFLPWGEVIV*IIFCLKGREAETWR
Trigger: CCTCCAGGTTTCAGCTTCTCTGCCTTTCAGGCAGAAGATAATGCAGACGATGACTTCTCCCCATGGCAAGAAGGGACCAGCCCAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp TGGCAATGGCTGCTCTTAACCGCAGGAACACCAGGCCATTCTGATTaGCCCTCCGAACCTCATGGAGTAGATGTCCATAGCAGGCATGAC +
Preference number: 5 (lower is better)
Translates to: WQWLLLTAGTPGHSD*PSEPHGVDVHSRHD
Trigger: GTCATGCCTGCTATGGACATCTACTCCATGAGGTTCGGAGGGCCAATCAGAATGGCCTGGTGTTCCTGCGGTTAAGAGCAGCCATTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp CCCAGCAGGATGCGTCCCTCCTCAGAGATATTCACAGTCAGGACCTaGTTGGCCATGGTGAGGACACGTCCTTTAGAGATGAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: PSRMRPSSEIFTVRT*LAMVRTRPLEMSFS
Trigger: TGAGAAGCTCATCTCTAAAGGACGTGTCCTCACCATGGCCAACCAGGTCCTGACTGTGAATATCTCTGAGGAGGGACGCATCCTGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp TACCCAGGACACTGTTGTTGCCCTGGGTCTCCAGAGAGTGATTTGTaGGCACAAAGATGGTGTAGGCTTTGGCAGCCTCGATTTGGGCCA +
Preference number: 5 (lower is better)
Translates to: YPGHCCCPGSPESDL*AQRWCRLWQPRFGP
Trigger: TGGCCCAAATCGAGGCTGCCAAAGCCTACACCATCTTTGTGCCCACAAATCACTCTCTGGAGACCCAGGGCAACAACAGTGTCCTGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp CAGACGCCAAGGCCTCAATGTTGCGAATCATATGACCCCGCAAAATaGCTGCCAGTTTGTCACGGTGGTCCTCGTGGAAGAGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: QTPRPQCCESYDPAK*LPVCHGGPRGRASS
Trigger: AGAACTGGCTCTTCCACGAGGACCACCGTGACAAACTGGCAGCCATTTTGCGGGGTCATATGATTCGCAACATTGAGGCCTTGGCGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp GTCCCCCGGCTGGCATTGATACTCAGAAAGGTGGCGTTAGAAGCGTaGAGTTCTAGATCTGGGCCACTCAGCGTCATGTTGTCCACAAAG +
Preference number: 5 (lower is better)
Translates to: VPRLALILRKVALEA*SSRSGPLSVMLSTK
Trigger: CTTTGTGGACAACATGACGCTGAGTGGCCCAGATCTAGAACTCCACGCTTCTAACGCCACCTTTCTGAGTATCAATGCCAGCCGGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp GTGTTGTCAGGGCCCGTGTCACTTATGAAGAGGCTAAGACCTGAGTaGGCAGGAAGCAATGTCCCCCGGCTGGCATTGATACTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: VLSGPVSLMKRLRPE*AGSNVPRLALILRK
Trigger: CTTTCTGAGTATCAATGCCAGCCGGGGGACATTGCTTCCTGCCCACTCAGGTCTTAGCCTCTTCATAAGTGACACGGGCCCTGACAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCCACCCCTCAGAAGCGTaGTTGTTAATGCTTGTCATA +
Preference number: 5 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPHPSEA*LLMLVI
Trigger: TATGACAAGCATTAACAACAACGCTTCTGAGGGGTG...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATCCCAGGACACTGTTGTaGCCCTGGGTCTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNPRTLL*PWVSRE
Trigger: CTCTCTGGAGACCCAGGGCAACAACAGTGTCCTGGG...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAACTGGTCCAGCATCTCTaGGCTCCACAGCTTCCGGCA +
Preference number: 5 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKLVQHL*APQLPA
Trigger: TGCCGGAAGCTGTGGAGCCAAGAGATGCTGGACCAG...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAAGTAAGCTCCACGCATaGAGATGGAGTGCAATGGAG +
Preference number: 5 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSSKLHA*RWSAME
Trigger: CTCCATTGCACTCCATCTCAATGCGTGGAGCTTACT...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCTGCCAAAAACAGGGTaGGGGACAGAAACCAGGGTT +
Preference number: 5 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLALPKTG*GTETRV
Trigger: AACCCTGGTTTCTGTCCCCAACCCTGTTTTTGGCAG...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS GCA 90 bp CGCCAAGGCCTCAATGTTGCGAATCATATGACCCCGCAAAATGGCTaGCAGTTTGTCACGGTGGTCCTCGTGGAAGAGCCAGTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: RQGLNVANHMTPQNG*QFVTVVLVEEPVLS
Trigger: AGAAAGAACTGGCTCTTCCACGAGGACCACCGTGACAAACTGGCAGCCATTTTGCGGGGTCATATGATTCGCAACATTGAGGCCTTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp GGGTCTCCAGAGAGTGATTTGTGGGCACAAAGATGGTGTAGGCTTTaGCAGCCTCGATTTGGGCCACCAGTTTGTGGTGCTTTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: GSPESDLWAQRWCRL*QPRFGPPVCGALAA
Trigger: AGCAGCTAAAGCACCACAAACTGGTGGCCCAAATCGAGGCTGCCAAAGCCTACACCATCTTTGTGCCCACAAATCACTCTCTGGAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp TGTTGTTGCCCTGGGTCTCCAGAGAGTGATTTGTGGGCACAAAGATaGTGTAGGCTTTGGCAGCCTCGATTTGGGCCACCAGTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: CCCPGSPESDLWAQR*CRLWQPRFGPPVCG
Trigger: ACCACAAACTGGTGGCCCAAATCGAGGCTGCCAAAGCCTACACCATCTTTGTGCCCACAAATCACTCTCTGGAGACCCAGGGCAACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp CCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCGCATATCTCATGTTTTaGAAAGTGATGGTGACCTCC +
Preference number: 5 (lower is better)
Translates to: PLRALLLSWTDHWPPQPPAYLMF*KVMVTS
Trigger: GGAGGTCACCATCACTTTCAAAAACATGAGATATGC...GGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAACAGTCAGGACCTGGTaGGCCATGGTGAGGACACGT +
Preference number: 5 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKTVRTW*AMVRTR
Trigger: ACGTGTCCTCACCATGGCCAACCAGGTCCTGACTGT...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGGCTCTCCATGCTTCTTaGGGTCGGAGCAGATATGAC +
Preference number: 5 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLALHAS*GRSRYD
Trigger: GTCATATCTGCTCCGACCCAAAGAAGCATGGAGAGC...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATTCCCCACTCCAGCCTTaGTGGCAAATGCAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNSPLQP*WQMQWW
Trigger: CCACCACTGCATTTGCCACAAAGGCTGGAGTGGGGA...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCATCTCCAGAGAGTGATTaGTGGGCACAAAGATGGTGT +
Preference number: 5 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSSPESD*WAQRWC
Trigger: ACACCATCTTTGTGCCCACAAATCACTCTCTGGAGA...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ACATGGCCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCAAGAAGGAGGCATACTaGTTCCGTAGGAGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: TWPTSAEGTFIVLDRPLAKKEAY*FRRSSS
Trigger: ACTGGAGCTCCTACGGAACAAGTATGCCTCCTTCTT...GGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp AGAAAGAGATGGTGTTTCCGTGCATGGTTCGGAGTTGGCCCAGGTTaGGTAGGTCAGACGCCAAGGCCTCAATGTTGCGAATCATATGAC +
Preference number: 5 (lower is better)
Translates to: RKRWCFRAWFGVGPG*VGQTPRPQCCESYD
Trigger: GTCATATGATTCGCAACATTGAGGCCTTGGCGTCTGACCTACCCAACCTGGGCCAACTCCGAACCATGCACGGAAACACCATCTCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATTGGCCAACAGTTTTCTaGGAGTCCCCTGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNWPTVF*ESPGSG
Trigger: CCCACTTCCAGGGGACTCCAAGAAAACTGTTGGCCA...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATATGTGTAGGATGCCATaGGTAGCAAGGAGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNMCRMP*VARRSG
Trigger: CCCCGACCTCCTTGCTACCAATGGCATCCTACACAT...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp GTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCCACTCAGCGTCATGTaGTCCACAAAGCCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: VLDRPLAPSATLTSNKNGPLSVM*STKPLL
Trigger: CAACAAAGGCTTTGTGGACAACATGACGCTGAGTGG...ACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp GCCTGTTTTTCCTGGAAATGTAGGTCAGTGCACAAAGCATCAGTGTaGCAAGGTGATGATCCTCCCAAGCATCTGTCCACAGGGGGTTCA +
Preference number: 5 (lower is better)
Translates to: ACFSWKCRSVHKASV*QGDDPPKHLSTGGS
Trigger: TGAACCCCCTGTGGACAGATGCTTGGGAGGATCATCACCTTGCCACACTGATGCTTTGTGCACTGACCTACATTTCCAGGAAAAACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp CCCACATCCGCTGAGGGCACTTTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCACTTCTTGGGACATaGATGATCAGTGATTTTCTG +
Preference number: 5 (lower is better)
Translates to: PTSAEGTFIVLDRPLAPSALLGT*MISDFL
Trigger: CAGAAAATCACTGATCATCAATGTCCCAAGAAGTGC...TGAGGGGGCCAATGGTCTGTCCAGGACAATAAAAGTGCCCTCAGCGGATGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATCTGCCAAAAACAGGGTaGGGGACAGAAACCAGGGTT +
Preference number: 5 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNLPKTG*GTETRV
Trigger: AACCCTGGTTTCTGTCCCCAACCCTGTTTTTGGCAG...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000160024.8
CDS CCA 90 bp ACTCTGCTGTCGGCAGGAAGAGTGATGCTTGAATTCTTGAACCACTaGGAGAAGGCAGAGAAATGGGCATTTGCCTCCAGTTCCTGGATA +
Preference number: 5 (lower is better)
Translates to: TLLSAGRVMLEFLNH*EKAEKWAFASSSWI
Trigger: TATCCAGGAACTGGAGGCAAATGCCCATTTCTCTGCCTTCTCCCAGTGGTTCAAGAATTCAAGCATCACTCTTCCTGCCGACAGCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp ATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATATTTGGGCCACCAGTTaGTGGTGCTTTAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: IVLDRPLAPSATLTSNKNIWATS*WCFSCS
Trigger: AGAGCAGCTAAAGCACCACAAACTGGTGGCCCAAAT...ATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGGTCTGTCATCCTGTGACATGTaGCTTATTAAGTCAGCATGT +
Preference number: 5 (lower is better)
Translates to: LDRPLAPSATLTSNKNGLSSCDM*LIKSAC
Trigger: ACATGCTGACTTAATAAGCAACATGTCACAGGATGA...CAGACCATTTTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS-3UTR CAA 90 bp TTTATTGTCCTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAATTGTCCACAAAGCCTTaGTTGACAGGAACGAAGAGT +
Preference number: 5 (lower is better)
Translates to: FIVLDRPLAPSATLTSNKLSTKP*LTGTKS
Trigger: ACTCTTCGTTCCTGTCAACAAAGGCTTTGTGGACAA...TTTATTGCTTGTCAGGGTGGCTGAGGGGGCCAATGGTCTGTCCAGGACAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 90 bp GTTGCAGTAGTCAGCACAGCCTTTCTTCAGAACGTTGAGCCCATTTaGGTCGTGGATATAAACGCACTCCTTGGGGAAGATATCCATTTT +
Preference number: 5 (lower is better)
Translates to: VAVVSTAFLQNVEPI*VVDINALLGEDIHF
Trigger: AAAATGGATATCTTCCCCAAGGAGTGCGTTTATATCCACGACCCAAATGGGCTCAACGTTCTGAAGAAAGGCTGTGCTGACTACTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CGTTGGCAGCCGGCACATCGACCCTCCGCACAGGGATaGCCTCCGGTCCCAGCAGGATGCGTCCCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: RWQPAHRPSAQG*PPVPAGCVPPQ
Trigger: CTGAGGAGGGACGCATCCTGCTGGGACCGGAGGGCATCCCTGTGCGGAGGGTCGATGTGCCGGCTGCCAACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CTCCTGGCCAGCCAGCGTCCACCACCTGCGTGTGCTTaGGGGCCCTGCATTCTCCAGCATGTGCTCCCCTGC +
Preference number: 6 (lower is better)
Translates to: LLASQRPPPACA*GPCILQHVLPC
Trigger: GCAGGGGAGCACATGCTGGAGAATGCAGGGCCCCCAAGCACACGCAGGTGGTGGACGCTGGCTGGCCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp CCTCCTGGCCAGCCAGCGTCCACCACCTGCGTGTGCTaGGGGGCCCTGCATTCTCCAGCATGTGCTCCCCTG +
Preference number: 6 (lower is better)
Translates to: PPGQPASTTCVC*GALHSPACAPL
Trigger: CAGGGGAGCACATGCTGGAGAATGCAGGGCCCCCAAGCACACGCAGGTGGTGGACGCTGGCTGGCCAGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CTCACAGCTGTTGCCCAGACGGCACACGGCCTGGGGTaGACACGGTGGGGTGCACACAGGCTGCAACTCCAG +
Preference number: 6 (lower is better)
Translates to: LTAVAQTAHGLG*TRWGAHRLQLQ
Trigger: CTGGAGTTGCAGCCTGTGTGCACCCCACCGTGTGCACCCCAGGCCGTGTGCCGTCTGGGCAACAGCTGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CTGCACTCACAGCTGTTGCCCAGACGGCACACGGCCTaGGGTGCACACGGTGGGGTGCACACAGGCTGCAAC +
Preference number: 6 (lower is better)
Translates to: LHSQLLPRRHTA*GAHGGVHTGCN
Trigger: GTTGCAGCCTGTGTGCACCCCACCGTGTGCACCCCAGGCCGTGTGCCGTCTGGGCAACAGCTGTGAGTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp ACTGCTTTGCAGGTAGCCAGGCCGTGGCAGCCGCCATaGCCCACCCGACAGGGGTCAATGGGGCTGCACTCG +
Preference number: 6 (lower is better)
Translates to: TALQVARPWQPP*PTRQGSMGLHS
Trigger: CGAGTGCAGCCCCATTGACCCCTGTCGGGTGGGCAATGGCGGCTGCCACGGCCTGGCTACCTGCAAAGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp CAGACGCACCTGGCAACACCCTCCTGGATAACACAGTaGGCGTCCGAGTGGCAGGGCTGGGCCAGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: QTHLATPSWITQ*ASEWQGWASPV
Trigger: CACAGGGCTGGCCCAGCCCTGCCACTCGGACGCTCACTGTGTTATCCAGGAGGGTGTTGCCAGGTGCGTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CATCCCCTTCATAGCCCAGGCTGCACTCACAGCTGTTaGCCAGACGGCACACGGCCTGGGGTGCACACGGTG +
Preference number: 6 (lower is better)
Translates to: HPLHSPGCTHSC*PDGTRPGVHTV
Trigger: CACCGTGTGCACCCCAGGCCGTGTGCCGTCTGGGCAACAGCTGTGAGTGCAGCCTGGGCTATGAAGGGGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CGTGGCAGCCGCCATTGCCCACCCGACAGGGGTCAATaGGGCTGCACTCGTAGCCATTTCCAGCGAAGCCCA +
Preference number: 6 (lower is better)
Translates to: RGSRHCPPDRGQ*GCTRSHFQRSP
Trigger: TGGGCTTCGCTGGAAATGGCTACGAGTGCAGCCCCATTGACCCCTGTCGGGTGGGCAATGGCGGCTGCCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CCTGGCAGGTGCATGTCCGCTGCCCAGGAGCCACCTTaGTACAGTTGGCATAGGGTGAGCAGCCCCCATGGC +
Preference number: 6 (lower is better)
Translates to: PGRCMSAAQEPP*YSWHRVSSPHG
Trigger: GCCATGGGGGCTGCTCACCCTATGCCAACTGTACCAAGGTGGCTCCTGGGCAGCGGACATGCACCTGCCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp GGGGCACATGTACCCTGCTGGCACACCCCTCCACTGCCAGGACGGTaGTCACACAGACCGTGGACACAGCCACAGTCCTCCTGGCACTGC +
Preference number: 6 (lower is better)
Translates to: GAHVPCWHTPPLPGR*SHRPWTQPQSSWHC
Trigger: GCAGTGCCAGGAGGACTGTGGCTGTGTCCACGGTCTGTGTGACAACCGTCCTGGCAGTGGAGGGGTGTGCCAGCAGGGTACATGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp GCAGCCCCCATGGCCAGAGGCACAGGGATCCACCTCTaGGCAATAGCTGCCGTTGCCCGAGTATCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: AAPMARGTGIHL*AIAAVARVSCS
Trigger: GCTGCAGGATACTCGGGCAACGGCAGCTATTGCTCAGAGGTGGATCCCTGTGCCTCTGGCCATGGGGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp CGGCCAAGACATCAAGCAGTTTCCCGTTGCACGTGCTaGTCCCGTCACCCACGAAGCCGGCCCGACACTGGC +
Preference number: 6 (lower is better)
Translates to: RPRHQAVSRCTC*SRHPRSRPDTG
Trigger: GCCAGTGTCGGGCCGGCTTCGTGGGTGACGGGATCAGCACGTGCAACGGGAAACTGCTTGATGTCTTGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp GCTTGGGGGCCCTGCATTCTCCAGCATGTGCTCCCCTaGGATGACATGCTGTCGGCAGAGCTGCTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: AWGPCILQHVLP*DDMLSAELLSQ
Trigger: CTGGCTCAGCAGCTCTGCCGACAGCATGTCATCGCAGGGGAGCACATGCTGGAGAATGCAGGGCCCCCAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CTGCGTGTGCTTGGGGGCCCTGCATTCTCCAGCATGTaGTCCCCTGCGATGACATGCTGTCGGCAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: LRVLGGPAFSSM*SPAMTCCRQSC
Trigger: GCAGCTCTGCCGACAGCATGTCATCGCAGGGGAGCACATGCTGGAGAATGCAGGGCCCCCAAGCACACGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp AGCCAGCGTCCACCACCTGCGTGTGCTTGGGGGCCCTaGATTCTCCAGCATGTGCTCCCCTGCGATGACATG +
Preference number: 6 (lower is better)
Translates to: SQRPPPACAWGP*ILQHVLPCDDM
Trigger: CATGTCATCGCAGGGGAGCACATGCTGGAGAATGCAGGGCCCCCAAGCACACGCAGGTGGTGGACGCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CAGGGGCACATGTACCCTGCTGGCACACCCCTCCACTaGCAGGACGGTTGTCACACAGACCGTGGACACAGC +
Preference number: 6 (lower is better)
Translates to: QGHMYPAGTPLH*QDGCHTDRGHS
Trigger: GCTGTGTCCACGGTCTGTGTGACAACCGTCCTGGCAGTGGAGGGGTGTGCCAGCAGGGTACATGTGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CTGTGCACACACGGCCATCCCCTTCATAGCCCAGGCTaGACTCACAGCTGTTGCCCAGACGGCACACGGCCT +
Preference number: 6 (lower is better)
Translates to: LCTHGHPLHSPG*THSCCPDGTRP
Trigger: AGGCCGTGTGCCGTCTGGGCAACAGCTGTGAGTGCAGCCTGGGCTATGAAGGGGATGGCCGTGTGTGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CGCCGTGTGTTCGGACCGGTATTGAGGCAGTCAGCGTaGTCGCTGCAACCTCCACGGTGGCCATCCAAGCAG +
Preference number: 6 (lower is better)
Translates to: RRVFGPVLRQSA*SLQPPRWPSKQ
Trigger: CTGCTTGGATGGCCACCGTGGAGGTTGCAGCGAGCACGCTGACTGCCTCAATACCGGTCCGAACACACGGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CTTCCATTCCCGCGCAGCCCCTCCTGGCACAGCCCATaGTCACAGTCACATACTCCAGAGCAGGTGGGGCCA +
Preference number: 6 (lower is better)
Translates to: LPFPRSPSWHSP*SQSHTPEQVGP
Trigger: TGGCCCCACCTGCTCTGGAGTATGTGACTGTGACCATGGGCTGTGCCAGGAGGGGCTGCGCGGGAATGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp TGCATGTCCGCTGCCCAGGAGCCACCTTGGTACAGTTaGCATAGGGTGAGCAGCCCCCATGGCCAGAGGCAC +
Preference number: 6 (lower is better)
Translates to: CMSAAQEPPWYS*HRVSSPHGQRH
Trigger: GTGCCTCTGGCCATGGGGGCTGCTCACCCTATGCCAACTGTACCAAGGTGGCTCCTGGGCAGCGGACATGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp GGCAGCAGGATGCCTTCCAGCATGTGGATCACACCGTaGGCAGCCGGCACATCGACCCTCCGCACAGGGATG +
Preference number: 6 (lower is better)
Translates to: GSRMPSSMWITP*AAGTSTLRTGM
Trigger: CATCCCTGTGCGGAGGGTCGATGTGCCGGCTGCCAACGGTGTGATCCACATGCTGGAAGGCATCCTGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp GTACCCTGCTGGCACACCCCTCCACTGCCAGGACGGTaGTCACACAGACCGTGGACACAGCCACAGTCCTCC +
Preference number: 6 (lower is better)
Translates to: VPCWHTPPLPGR*SHRPWTQPQSS
Trigger: GGAGGACTGTGGCTGTGTCCACGGTCTGTGTGACAACCGTCCTGGCAGTGGAGGGGTGTGCCAGCAGGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp ATACAGGTGGCCTTGCCTGGCCCACGGTACAGGCAGAAGGTAGAGTaGCTGGGGCAGCCACCAAAGTTGGTGAGGCAAGGGTCCCGGGGC +
Preference number: 6 (lower is better)
Translates to: IQVALPGPRYRQKVE*LGQPPKLVRQGSRG
Trigger: GCCCCGGGACCCTTGCCTCACCAACTTTGGTGGCTGCCCCAGCAACTCTACCTTCTGCCTGTACCGTGGGCCAGGCAAGGCCACCTGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp GTGGAGAAGTTGGCAGTGGCGGCCAAGACATCAAGCAGTTTCCCGTaGCACGTGCTGATCCCGTCACCCACGAAGCCGGCCCGACACTGG +
Preference number: 6 (lower is better)
Translates to: VEKLAVAAKTSSSFP*HVLIPSPTKPARHW
Trigger: CCAGTGTCGGGCCGGCTTCGTGGGTGACGGGATCAGCACGTGCAACGGGAAACTGCTTGATGTCTTGGCCGCCACTGCCAACTTCTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp ATTTTCTGGTCACAGCGGAGACCCTGCCAGCCCGCATaGCAGACACAGCTTCCATTCCCGCGCAGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: IFWSQRRPCQPA*QTQLPFPRSPS
Trigger: GGAGGGGCTGCGCGGGAATGGAAGCTGTGTCTGTCATGCGGGCTGGCAGGGTCTCCGCTGTGACCAGAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp CGTGGCATTCACAGCGCCGTGTGTTCGGACCGGTATTaGGGCAGTCAGCGTGCTCGCTGCAACCTCCACGGT +
Preference number: 6 (lower is better)
Translates to: RGIHSAVCSDRY*GSQRARCNLHG
Trigger: ACCGTGGAGGTTGCAGCGAGCACGCTGACTGCCTCAATACCGGTCCGAACACACGGCGCTGTGAATGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp AGCCGCCATTGCCCACCCGACAGGGGTCAATGGGGCTaGACTCGTAGCCATTTCCAGCGAAGCCCAGCTTAC +
Preference number: 6 (lower is better)
Translates to: SRHCPPDRGQWG*TRSHFQRSPAY
Trigger: GTAAGCTGGGCTTCGCTGGAAATGGCTACGAGTGCAGCCCCATTGACCCCTGTCGGGTGGGCAATGGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CCACTGCCAAGATCCCCGACAGTCCGAAGAGGGAGCTaGCAGGAGCTTCCAGCAAAGGGCCCTCCAATGGCA +
Preference number: 6 (lower is better)
Translates to: PLPRSPTVRRGS*QELPAKGPPMA
Trigger: TGCCATTGGAGGGCCCTTTGCTGGAAGCTCCTGGCAGCTCCCTCTTCGGACTGTCGGGGATCTTGGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp GGCCAGAGGCACAGGGATCCACCTCTGAGCAATAGCTaGCGTTGCCCGAGTATCCTGCAGCACAGACGCAGG +
Preference number: 6 (lower is better)
Translates to: GQRHRDPPLSNS*RCPSILQHRRR
Trigger: CCTGCGTCTGTGCTGCAGGATACTCGGGCAACGGCAGCTATTGCTCAGAGGTGGATCCCTGTGCCTCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp GCACACAGGCTGCAACTCCAGCTGCACTTCACAGCGTaGCCCAGTCCAGCCTTCATCGCAGAAGCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: AHRLQLQLHFTA*PSPAFIAEAGA
Trigger: GGCTCCTGCTTCTGCGATGAAGGCTGGACTGGGGCACGCTGTGAAGTGCAGCTGGAGTTGCAGCCTGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp ACCCCTCCACTGCCAGGACGGTTGTCACACAGACCGTaGACACAGCCACAGTCCTCCTGGCACTGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: TPPLPGRLSHRP*TQPQSSWHCSP
Trigger: TGGAGAGCAGTGCCAGGAGGACTGTGGCTGTGTCCACGGTCTGTGTGACAACCGTCCTGGCAGTGGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp AATCGGCCTTGGAAGCCAGGGGCACATGTACCCTGCTaGCACACCCCTCCACTGCCAGGACGGTTGTCACAC +
Preference number: 6 (lower is better)
Translates to: NRPWKPGAHVPC*HTPPLPGRLSH
Trigger: GTGTGACAACCGTCCTGGCAGTGGAGGGGTGTGCCAGCAGGGTACATGTGCCCCTGGCTTCCAAGGCCGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp GCCACACAGATGCGGCCATCCCCACTCCAGCCTTTGTaGCAAATGCAGTGGTGGGTACCCAGGTCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: ATQMRPSPLQPL*QMQWWVPRSPG
Trigger: CCCTGGAGACCTGGGTACCCACCACTGCATTTGCCACAAAGGCTGGAGTGGGGATGGCCGCATCTGTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp GCCTTGCCTGGCCCACGGTACAGGCAGAAGGTAGAGTaGCTGGGGCAGCCACCAAAGTTGGTGAGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: ALPGPRYRQKVE*LGQPPKLVRQG
Trigger: CCCTTGCCTCACCAACTTTGGTGGCTGCCCCAGCAACTCTACCTTCTGCCTGTACCGTGGGCCAGGCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp ATCAGTCGGCCATCTCGCAGGCTGTCCACAGCTTCGTaGCTCGGGGCAAAGACTGTGAAGGGCCCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: ISRPSRRLSTAS*LGAKTVKGPGP
Trigger: TGGGCCTGGGCCCTTCACAGTCTTTGCCCCGAGCAACGAAGCTGTGGACAGCCTGCGAGATGGCCGACTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp ACGTGGCATTCACAGCGCCGTGTGTTCGGACCGGTATaGAGGCAGTCAGCGTGCTCGCTGCAACCTCCACGG +
Preference number: 6 (lower is better)
Translates to: TWHSQRRVFGPV*RQSACSLQPPR
Trigger: CCGTGGAGGTTGCAGCGAGCACGCTGACTGCCTCAATACCGGTCCGAACACACGGCGCTGTGAATGCCACGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp TTGGCAGTGGCGGCCAAGACATCAAGCAGTTTCCCGTaGCACGTGCTGATCCCGTCACCCACGAAGCCGGCC +
Preference number: 6 (lower is better)
Translates to: LAVAAKTSSSFP*HVLIPSPTKPA
Trigger: GGCCGGCTTCGTGGGTGACGGGATCAGCACGTGCAACGGGAAACTGCTTGATGTCTTGGCCGCCACTGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp CCACGGTACAGGCAGAAGGTAGAGTTGCTGGGGCAGCCACCAAAGTaGGTGAGGCAAGGGTCCCGGGGCAGACACACTTTCCCATCTCCG +
Preference number: 6 (lower is better)
Translates to: PRYRQKVELLGQPPK*VRQGSRGRHTFPSP
Trigger: CGGAGATGGGAAAGTGTGTCTGCCCCGGGACCCTTGCCTCACCAACTTTGGTGGCTGCCCCAGCAACTCTACCTTCTGCCTGTACCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp GAAGCAGGAGCCAGAGCCCCCAAGACCTTCATCACAACGGCCATGTaGGGTACAGCGGCAAGCTTGGCACTGGGGTCCAAAGGCACCTGG +
Preference number: 6 (lower is better)
Translates to: EAGARAPKTFITTAM*GTAASLALGSKGTW
Trigger: CCAGGTGCCTTTGGACCCCAGTGCCAAGCTTGCCGCTGTACCCAACATGGCCGTTGTGATGAAGGTCTTGGGGGCTCTGGCTCCTGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS CAA 90 bp TCAGGCAGGCAGGTGCAAGTGACCACTGTCCCCACCTGGCTGCAGTaGGCATGCTTACTGCAGCCACCATGCCCCTTCTGGCACAGGTCT +
Preference number: 6 (lower is better)
Translates to: SGRQVQVTTVPTWLQ*ACLLQPPCPFWHRS
Trigger: AGACCTGTGCCAGAAGGGGCATGGTGGCTGCAGTAAGCATGCCAACTGCAGCCAGGTGGGGACAGTGGTCACTTGCACCTGCCTGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp GGTACCCAGGTCTCCAGGGACACATTCAGCGTTCTCTaGGCAGCCACCACGGTCTGGGCGCGAGCAAGGATT +
Preference number: 6 (lower is better)
Translates to: GTQVSRDTFSVL*AATTVWARARI
Trigger: AATCCTTGCTCGCGCCCAGACCGTGGTGGCTGCTCAGAGAACGCTGAATGTGTCCCTGGAGACCTGGGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp AGGCTTGCAGGGCAGAATCTGTGGGCCACAGCATCGTaGAGGGGCGATGGGACGCATCCTGAAGCATGGGCA +
Preference number: 6 (lower is better)
Translates to: RLAGQNLWATAS*RGDGTHPEAWA
Trigger: TGCCCATGCTTCAGGATGCGTCCCATCGCCCCTTCACGATGCTGTGGCCCACAGATTCTGCCCTGCAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp ATAGCTCTCCATCGCCCGTGTAGCCATCCTGGCAGGTaGATGTCCGCTGCCCAGGAGCCACCTTGGTACAGT +
Preference number: 6 (lower is better)
Translates to: IALHRPCSHPGR*MSAAQEPPWYS
Trigger: ACTGTACCAAGGTGGCTCCTGGGCAGCGGACATGCACCTGCCAGGATGGCTACACGGGCGATGGAGAGCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CGGCCATCCCCACTCCAGCCTTTGTGGCAAATGCAGTaGTGGGTACCCAGGTCTCCAGGGACACATTCAGCG +
Preference number: 6 (lower is better)
Translates to: RPSPLQPLWQMQ*WVPRSPGTHSA
Trigger: CGCTGAATGTGTCCCTGGAGACCTGGGTACCCACCACTGCATTTGCCACAAAGGCTGGAGTGGGGATGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp AGGTTCAAAGCGATCACAGCGGGCGCCAAGGTCAGGTaGCTCCAGCAGCTGGTCAATGCCATAAGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: RFKAITAGAKVR*LQQLVNAISQA
Trigger: GGCCTGGCTTATGGCATTGACCAGCTGCTGGAGCCACCTGACCTTGGCGCCCGCTGTGATCGCTTTGAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp CAGGTGCAAGTGACCACTGTCCCCACCTGGCTGCAGTaGGCATGCTTACTGCAGCCACCATGCCCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: QVQVTTVPTWLQ*ACLLQPPCPFW
Trigger: CCAGAAGGGGCATGGTGGCTGCAGTAAGCATGCCAACTGCAGCCAGGTGGGGACAGTGGTCACTTGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp CCGAGGACAGGGTGGCTCCAGCCCACAGATGCTGCAAGTCTTCATTaGGAGTGGCTGAGGTTCAAAGCGATCACAGCGGGCGCCAAGGTC +
Preference number: 6 (lower is better)
Translates to: PRTGWLQPTDAASLH*EWLRFKAITAGAKV
Trigger: GACCTTGGCGCCCGCTGTGATCGCTTTGAACCTCAGCCACTCCAAATGAAGACTTGCAGCATCTGTGGGCTGGAGCCACCCTGTCCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp CCCAAGACCTTCATCACAACGGCCATGTTGGGTACAGCGGCAAGCTaGGCACTGGGGTCCAAAGGCACCTGGGGCACAGAGTTCACAGGC +
Preference number: 6 (lower is better)
Translates to: PKTFITTAMLGTAAS*ALGSKGTWGTEFTG
Trigger: GCCTGTGAACTCTGTGCCCCAGGTGCCTTTGGACCCCAGTGCCAAGCTTGCCGCTGTACCCAACATGGCCGTTGTGATGAAGGTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS TCA 72 bp AGTGACCAGGGCAACAGCTGGGCTTCCAGACGGTGGTaGCACAGTTTCGGTGGCAGCCCCTACTCATGTGGT +
Preference number: 6 (lower is better)
Translates to: SDQGNSWASRRW*HSFGGSPYSCG
Trigger: ACCACATGAGTAGGGGCTGCCACCGAAACTGTGTCACCACCGTCTGGAAGCCCAGCTGTTGCCCTGGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS GCA 72 bp CGACATTCCCCATTGCCCAGGAATCTGTCTTGGCACTaGCCATGGCCTGAGCACACTCCACCAAGACCCCCT +
Preference number: 6 (lower is better)
Translates to: RHSPLPRNLSWH*PWPEHTPPRPP
Trigger: AGGGGGTCTTGGTGGAGTGTGCTCAGGCCATGGGCAGTGCCAAGACAGATTCCTGGGCAATGGGGAATGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp TCTGGGAACAGGGGTCCAGAAGCTTGCAAGTCTGAATaGCATCGCCACTGTAGCCCTCACGGCAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: SGNRGPEACKSE*HRHCSPHGSCR
Trigger: CCTGCAGCTGCCGTGAGGGCTACAGTGGCGATGGCATTCAGACTTGCAAGCTTCTGGACCCCTGTTCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CCCATGACAGGTGATGCCGTCCCCCACAGTATGTGTTaGGTCACAGGAACACGTCCTCTGGCCATCTCCCGT +
Preference number: 6 (lower is better)
Translates to: PMTGDAVPHSMC*VTGTRPLAISR
Trigger: ACGGGAGATGGCCAGAGGACGTGTTCCTGTGACGCAACACATACTGTGGGGGACGGCATCACCTGTCATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp GAGAAAATGGGCCCTGGCCAGTTCTGGCAGCATCTTTaGCTGCAACCAGAAGGCCTGGTCCTCGAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: EKMGPGQFWQHL*LQPEGLVLEAQ
Trigger: CTGAGCCTCGAGGACCAGGCCTTCTGGTTGCAGCCAAAGATGCTGCCAGAACTGGCCAGGGCCCATTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CCAGAGCCCCCAAGACCTTCATCACAACGGCCATGTTaGGTACAGCGGCAAGCTTGGCACTGGGGTCCAAAG +
Preference number: 6 (lower is better)
Translates to: PEPPRPSSQRPC*VQRQAWHWGPK
Trigger: CTTTGGACCCCAGTGCCAAGCTTGCCGCTGTACCCAACATGGCCGTTGTGATGAAGGTCTTGGGGGCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS CCA 72 bp ATGCCGTTGAAAGCCATGATGTCCCACACGATGACGTaGCTAACCACAACTGCCCCCGGGGCCAGAGGAACC +
Preference number: 6 (lower is better)
Translates to: MPLKAMMSHTMT*LTTTAPGARGT
Trigger: GGTTCCTCTGGCCCCGGGGGCAGTTGTGGTTAGCCACGTCATCGTGTGGGACATCATGGCTTTCAACGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp ATGGCCACACAGATGCGGCCATCCCCACTCCAGCCTTaGTGGCAAATGCAGTGGTGGGTACCCAGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: MATQMRPSPLQP*WQMQWWVPRSP
Trigger: TGGAGACCTGGGTACCCACCACTGCATTTGCCACAAAGGCTGGAGTGGGGATGGCCGCATCTGTGTGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp GTCCCATGGAACCCCTCTTGGCAGCGACATTCCCCATaGCCCAGGAATCTGTCTTGGCACTGCCCATGGCCT +
Preference number: 6 (lower is better)
Translates to: VPWNPSWQRHSP*PRNLSWHCPWP
Trigger: AGGCCATGGGCAGTGCCAAGACAGATTCCTGGGCAATGGGGAATGTCGCTGCCAAGAGGGGTTCCATGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp TTCATCACAACGGCCATGTTGGGTACAGCGGCAAGCTaGGCACTGGGGTCCAAAGGCACCTGGGGCACAGAG +
Preference number: 6 (lower is better)
Translates to: FITTAMLGTAAS*ALGSKGTWGTE
Trigger: CTCTGTGCCCCAGGTGCCTTTGGACCCCAGTGCCAAGCTTGCCGCTGTACCCAACATGGCCGTTGTGATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS CAA 72 bp GCCAGAGCCCCCAAGACCTTCATCACAACGGCCATGTaGGGTACAGCGGCAAGCTTGGCACTGGGGTCCAAA +
Preference number: 6 (lower is better)
Translates to: ARAPKTFITTAM*GTAASLALGSK
Trigger: TTTGGACCCCAGTGCCAAGCTTGCCGCTGTACCCAACATGGCCGTTGTGATGAAGGTCTTGGGGGCTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS CAA 90 bp GCAAGCAGATGGCTGGCAGGGGTCAGGAGCAAGACAAACATTGTCTaGCTGAGTGTATCCGGGCAGGCACTTGCAGGTGGGTGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: ASRWLAGVRSKTNIV*LSVSGQALAGGCLC
Trigger: GCAGAGGCACCCACCTGCAAGTGCCTGCCCGGATACACTCAGCAAGACAATGTTTGTCTTGCTCCTGACCCCTGCCAGCCATCTGCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp TCACAGGCTGTCCCATGGAACCCCTCTTGGCAGCGACATTCCCCATaGCCCAGGAATCTGTCTTGGCACTGCCCATGGCCTGAGCACACT +
Preference number: 6 (lower is better)
Translates to: SQAVPWNPSWQRHSP*PRNLSWHCPWPEHT
Trigger: AGTGTGCTCAGGCCATGGGCAGTGCCAAGACAGATTCCTGGGCAATGGGGAATGTCGCTGCCAAGAGGGGTTCCATGGGACAGCCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp GCGACCCAGCTCACACATCTCACAGGCTGTCCCATGGAACCCCTCTaGGCAGCGACATTCCCCATTGCCCAGGAATCTGTCTTGGCACTG +
Preference number: 6 (lower is better)
Translates to: ATQLTHLTGCPMEPL*AATFPIAQESVLAL
Trigger: CAGTGCCAAGACAGATTCCTGGGCAATGGGGAATGTCGCTGCCAAGAGGGGTTCCATGGGACAGCCTGTGAGATGTGTGAGCTGGGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp CATTCATCGATGGCCACACAGATGCGGCCATCCCCACTCCAGCCTTaGTGGCAAATGCAGTGGTGGGTACCCAGGTCTCCAGGGACACAT +
Preference number: 6 (lower is better)
Translates to: HSSMATQMRPSPLQP*WQMQWWVPRSPGTH
Trigger: ATGTGTCCCTGGAGACCTGGGTACCCACCACTGCATTTGCCACAAAGGCTGGAGTGGGGATGGCCGCATCTGTGTGGCCATCGATGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp GTGGTCCTCGTGGAAGAGCCAGTTCTTTCTATCAGGAGGCAAGGCTaGCAGGGCAGAATCTGTGGGCCACAGCATCGTGAAGGGGCGATG +
Preference number: 6 (lower is better)
Translates to: VVLVEEPVLSIRRQG*QGRICGPQHREGAM
Trigger: CATCGCCCCTTCACGATGCTGTGGCCCACAGATTCTGCCCTGCAAGCCTTGCCTCCTGATAGAAAGAACTGGCTCTTCCACGAGGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp TGGCTAACCACAACTGCCCCCGGGGCCAGAGGAACCAGAGAAGTGTaGTCAGGGCCCGTGTCACTTATGAAGAGGCTAAGACCTGAGTGG +
Preference number: 6 (lower is better)
Translates to: WLTTTAPGARGTREV*SGPVSLMKRLRPEW
Trigger: CCACTCAGGTCTTAGCCTCTTCATAAGTGACACGGGCCCTGACAACACTTCTCTGGTTCCTCTGGCCCCGGGGGCAGTTGTGGTTAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp CCTGGCTGCAGCCACTTAAGGATATCGCGGCGCCCCTaGGCTGCAACTCATAGCGGCAGTCCAGAAGTATCT +
Preference number: 6 (lower is better)
Translates to: PGCSHLRISRRP*AATHSGSPEVS
Trigger: AGATACTTCTGGACTGCCGCTATGAGTTGCAGCTCAGGGGCGCCGCGATATCCTTAAGTGGCTGCAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp CCCAAATCTGTTGGGGTCTCGGCACTCCTGGCAGACTaGACCGCTGAAGTTTTCCTGGCACACACAGGTCCC +
Preference number: 6 (lower is better)
Translates to: PKSVGVSALLAD*TAEVFLAHTGP
Trigger: GGGACCTGTGTGTGCCAGGAAAACTTCAGCGGTTCAGTCTGCCAGGAGTGCCGAGACCCCAACAGATTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp TGGCAGGGGTCAGGAGCAAGACAAACATTGTCTTGCTaGGTGTATCCGGGCAGGCACTTGCAGGTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: WQGSGARQTLSC*VYPGRHLQVGA
Trigger: GGCACCCACCTGCAAGTGCCTGCCCGGATACACTCAGCAAGACAATGTTTGTCTTGCTCCTGACCCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp TGCTCCCCTGCGATGACATGCTGTCGGCAGAGCTGCTaGGCCAGCGTCGCATTCATGTTACTGGAGACAGAG +
Preference number: 6 (lower is better)
Translates to: CSPAMTCCRQSC*ASVAFMLLETE
Trigger: CTCTGTCTCCAGTAACATGAATGCGACGCTGGCTCAGCAGCTCTGCCGACAGCATGTCATCGCAGGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp TCCGTAGGAGCTCCAGTCCAACTCTCCCATGACAGGTaGTGCCGTCCCCCACAGTATGTGTTGCGTCACAGG +
Preference number: 6 (lower is better)
Translates to: SVGAPVQLSHDR*CRPPQYVLRHR
Trigger: CCTGTGACGCAACACATACTGTGGGGGACGGCATCACCTGTCATGGGAGAGTTGGACTGGAGCTCCTACGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp GTCAGGGCCCGTGTCACTTATGAAGAGGCTAAGACCTaGGTGGGCAGGAAGCAATGTCCCCCGGCTGGCATT +
Preference number: 6 (lower is better)
Translates to: VRARVTYEEAKT*VGRKQCPPAGI
Trigger: AATGCCAGCCGGGGGACATTGCTTCCTGCCCACTCAGGTCTTAGCCTCTTCATAAGTGACACGGGCCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp AGATGCGGCCATCCCCACTCCAGCCTTTGTGGCAAATaGAGTGGTGGGTACCCAGGTCTCCAGGGACACATT +
Preference number: 6 (lower is better)
Translates to: RCGHPHSSLCGK*SGGYPGLQGHI
Trigger: AATGTGTCCCTGGAGACCTGGGTACCCACCACTGCATTTGCCACAAAGGCTGGAGTGGGGATGGCCGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp AAATGGGCCCTGGCCAGTTCTGGCAGCATCTTTGGCTaGAACCAGAAGGCCTGGTCCTCGAGGCTCAGTCTA +
Preference number: 6 (lower is better)
Translates to: KWALASSGSIFG*NQKAWSSRLSL
Trigger: TAGACTGAGCCTCGAGGACCAGGCCTTCTGGTTGCAGCCAAAGATGCTGCCAGAACTGGCCAGGGCCCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CGGGTGAGACCGCAGGAGAAAGAGATGGTGTTTCCGTaGATGGTTCGGAGTTGGCCCAGGTTGGGTAGGTCA +
Preference number: 6 (lower is better)
Translates to: RVRPQEKEMVFP*MVRSWPRLGRS
Trigger: TGACCTACCCAACCTGGGCCAACTCCGAACCATGCACGGAAACACCATCTCTTTCTCCTGCGGTCTCACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CATGATGTCCCACACGATGACGTGGCTAACCACAACTaGCCCCGGGGCCAGAGGAACCAGAGAAGTGTTGTC +
Preference number: 6 (lower is better)
Translates to: HDVPHDDVANHN*PRGQRNQRSVV
Trigger: GACAACACTTCTCTGGTTCCTCTGGCCCCGGGGGCAGTTGTGGTTAGCCACGTCATCGTGTGGGACATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp ATACCCAGCAAAACACCGGCAGCTTCCATCTCCCCGTaGCCCATGGCTACACACGCCATGTACGCAGTTGCA +
Preference number: 6 (lower is better)
Translates to: IPSKTPAASISP*PMATHAMYAVA
Trigger: TGCAACTGCGTACATGGCGTGTGTAGCCATGGGCCACGGGGAGATGGAAGCTGCCGGTGTTTTGCTGGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp ACTGAGCATCGGGCCAGTGGGGAGCAAGCAGATGGCTaGCAGGGGTCAGGAGCAAGACAAACATTGTCTTGC +
Preference number: 6 (lower is better)
Translates to: TEHRASGEQADG*QGSGARQTLSC
Trigger: GCAAGACAATGTTTGTCTTGCTCCTGACCCCTGCCAGCCATCTGCTTGCTCCCCACTGGCCCGATGCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp AGAACGGTGAATGGCCCCGACGTGGTAAGAATCTCCTaGCAGCCCTGCTCCAGCATGGCAATGGCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: RTVNGPDVVRIS*QPCSSMAMAAL
Trigger: AAGAGCAGCCATTGCCATGCTGGAGCAGGGCTGCCAGGAGATTCTTACCACGTCGGGGCCATTCACCGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp GGAGACAGAGAACATGGATGGCACCAGAACGGTGAATaGCCCCGACGTGGTAAGAATCTCCTGGCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: GDREHGWHQNGE*PRRGKNLLAAL
Trigger: CAGGGCTGCCAGGAGATTCTTACCACGTCGGGGCCATTCACCGTTCTGGTGCCATCCATGTTCTCTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp GGAGCTGCCAGGAGCTTCCAGCAAAGGGCCCTCCAATaGCATGTGATTCACCTCAGGCTGGCCACTGTGATT +
Preference number: 6 (lower is better)
Translates to: GAARSFQQRALQ*HVIHLRLATVI
Trigger: AATCACAGTGGCCAGCCTGAGGTGAATCACATGCCATTGGAGGGCCCTTTGCTGGAAGCTCCTGGCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp GTACAGTTTATGCATTTCTCCCGAAGAGCCTCTGCGTaGCTGTGCAGGCAACGGCTGGAGCCCACTGCCAAG +
Preference number: 6 (lower is better)
Translates to: VQFMHFSRRASA*LCRQRLEPTAK
Trigger: CTTGGCAGTGGGCTCCAGCCGTTGCCTGCACAGCCACGCAGAGGCTCTTCGGGAGAAATGCATAAACTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp GACTCCCAGTGTAGCACATCTGGTGGCAGCAGGACGTaGTCAATGAAGTGCAGGACACCGTTCACCACCTCG +
Preference number: 6 (lower is better)
Translates to: DSQCSTSGGSRT*SMKCRTPFTTS
Trigger: CGAGGTGGTGAACGGTGTCCTGCACTTCATTGACCACGTCCTGCTGCCACCAGATGTGCTACACTGGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp AACTACACCTACACGATTATTACCACAGTCTGCCGCTaGGGTGACGACAGGGTGGGCAGCAGAGCCGTTGGC +
Preference number: 6 (lower is better)
Translates to: NYTYTIITTVCR*GDDRVGSRAVG
Trigger: GCCAACGGCTCTGCTGCCCACCCTGTCGTCACCCCAGCGGCAGACTGTGGTAATAATCGTGTAGGTGTAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp CCCCGTGGCCCATGGCTACACACGCCATGTACGCAGTaGCACACTGATTGGCAGTCAGGCCCAAATCTGTTG +
Preference number: 6 (lower is better)
Translates to: PRGPWLHTPCTQ*HTDWQSGPNLL
Trigger: CAACAGATTTGGGCCTGACTGCCAATCAGTGTGCAACTGCGTACATGGCGTGTGTAGCCATGGGCCACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp GGGTGGCTCCAGCCCACAGATGCTGCAAGTCTTCATTaGGAGTGGCTGAGGTTCAAAGCGATCACAGCGGGC +
Preference number: 6 (lower is better)
Translates to: GWLQPTDAASLH*EWLRFKAITAG
Trigger: GCCCGCTGTGATCGCTTTGAACCTCAGCCACTCCAAATGAAGACTTGCAGCATCTGTGGGCTGGAGCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp CCCATGGCTACACACGCCATGTACGCAGTTGCACACTaGTTGGCAGTCAGGCCCAAATCTGTTGGGGTCTCG +
Preference number: 6 (lower is better)
Translates to: PMATHAMYAVAH*LAVRPKSVGVS
Trigger: CGAGACCCCAACAGATTTGGGCCTGACTGCCAATCAGTGTGCAACTGCGTACATGGCGTGTGTAGCCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp AGGACCTCCACAGAGAGTGCCTCCCCAAGGATCACGTaGTGTCGCACCGTGTCTATACCCAGGACACTGTTG +
Preference number: 6 (lower is better)
Translates to: RTSTESASPRIT*CRTVSIPRTLL
Trigger: CAACAGTGTCCTGGGTATAGACACGGTGCGACATCACGTGATCCTTGGGGAGGCACTCTCTGTGGAGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp AGTGTAGCACATCTGGTGGCAGCAGGACGTGGTCAATaGAGTGCAGGACACCGTTCACCACCTCGAGATCGC +
Preference number: 6 (lower is better)
Translates to: SVAHLVAAGRGQ*SAGHRSPPRDR
Trigger: GCGATCTCGAGGTGGTGAACGGTGTCCTGCACTTCATTGACCACGTCCTGCTGCCACCAGATGTGCTACACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp TTGGTGTGGATGTCGCAACGTTTAGACCGTACCGTCTaGCCTCGGATGAAGCTGGAGTCTGACAGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: LVWMSQRLDRTV*PRMKLESDRQR
Trigger: CCTCTGCCTGTCAGACTCCAGCTTCATCCGAGGGCAGACGGTACGGTCTAAACGTTGCGACATCCACACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CATAGCAGGCATGACCGTCACCCACCTCGTCGTTTTTaGACACGCAGCTGGTCTTTCTGTCAGGGGTCACCT +
Preference number: 6 (lower is better)
Translates to: HSRHDRHPPRRF*TRSWSFCQGSP
Trigger: AGGTGACCCCTGACAGAAAGACCAGCTGCGTGTGCAAAAACGACGAGGTGGGTGACGGTCATGCCTGCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CCAGCCCTGTGGACCCACAGTTTCCCATGGATTCATTaGAGAATCGGCCTTGGAAGCCAGGGGCACATGTAC +
Preference number: 6 (lower is better)
Translates to: PALWTHSFPWIH*RIGLGSQGHMY
Trigger: GTACATGTGCCCCTGGCTTCCAAGGCCGATTCTGCAATGAATCCATGGGAAACTGTGGGTCCACAGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CTGAGCAGCCACCACGGTCTGGGCGCGAGCAAGGATTaGTGCGTTTGCAGGAGAAGCCATTACCTTCAAAAC +
Preference number: 6 (lower is better)
Translates to: LSSHHGLGASKD*CVCRRSHYLQN
Trigger: GTTTTGAAGGTAATGGCTTCTCCTGCAAACGCAGCAATCCTTGCTCGCGCCCAGACCGTGGTGGCTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp ACACTATCTAGTTGCTGCAGCAACCCGGGCCCGGTCTaGATGTCACCTCTTGGAGGCAACAAGACCTGGCTA +
Preference number: 6 (lower is better)
Translates to: TLSSCCSNPGPV*MSPLGGNKTWL
Trigger: TAGCCAGGTCTTGTTGCCTCCAAGAGGTGACATGCAGACCGGGCCCGGGTTGCTGCAGCAACTAGATAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp AGCACATCTGGTGGCAGCAGGACGTGGTCAATGAAGTaGAGGACACCGTTCACCACCTCGAGATCGCTGCTT +
Preference number: 6 (lower is better)
Translates to: STSGGSRTWSMK*RTPFTTSRSLL
Trigger: AAGCAGCGATCTCGAGGTGGTGAACGGTGTCCTGCACTTCATTGACCACGTCCTGCTGCCACCAGATGTGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CAGGCTGTCCCAGCAAAACCCGGATGGCAATTACACTaGCCACTTCCACGTATACCATCCAGGCACACGCCA +
Preference number: 6 (lower is better)
Translates to: QAVPAKPGWQLH*PLPRIPSRHTP
Trigger: TGGCGTGTGCCTGGATGGTATACGTGGAAGTGGGCAGTGTAATTGCCATCCGGGTTTTGCTGGGACAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS GCA 72 bp AAGGCTAACTACACCTACACGATTATTACCACAGTCTaGCGCTGGGGTGACGACAGGGTGGGCAGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: KANYTYTIITTV*RWGDDRVGSRA
Trigger: GGCTCTGCTGCCCACCCTGTCGTCACCCCAGCGGCAGACTGTGGTAATAATCGTGTAGGTGTAGTTAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp TTCAGACTCTGGCAGACTGGGAGCTCTTGGTCACAGTaGGGGCCAGTATACCCAGCAAAACACCGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: FRLWQTGSSWSQ*GPVYPAKHRQL
Trigger: AAGCTGCCGGTGTTTTGCTGGGTATACTGGCCCCCACTGTGACCAAGAGCTCCCAGTCTGCCAGAGTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CCCCTCAGAAGCGTTGTTGTTAATGCTTGTCATACCTaGTCGGCACATACAGGTGGCCTTGCCTGGCCCACG +
Preference number: 6 (lower is better)
Translates to: PLRSVVVNACHT*SAHTGGLAWPT
Trigger: CGTGGGCCAGGCAAGGCCACCTGTATGTGCCGACCAGGTATGACAAGCATTAACAACAACGCTTCTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp TGGTGTTTCCGTGCATGGTTCGGAGTTGGCCCAGGTTaGGTAGGTCAGACGCCAAGGCCTCAATGTTGCGAA +
Preference number: 6 (lower is better)
Translates to: WCFRAWFGVGPG*VGQTPRPQCCE
Trigger: TTCGCAACATTGAGGCCTTGGCGTCTGACCTACCCAACCTGGGCCAACTCCGAACCATGCACGGAAACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp GAGAAAGAGATGGTGTTTCCGTGCATGGTTCGGAGTTaGCCCAGGTTGGGTAGGTCAGACGCCAAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: EKEMVFPCMVRS*PRLGRSDAKAS
Trigger: TGAGGCCTTGGCGTCTGACCTACCCAACCTGGGCCAACTCCGAACCATGCACGGAAACACCATCTCTTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp AGGCCACCTTCAAAGGTCAAGTGCCGTTGCACAATGTaGGCCTCGTCTTCGCCTACTATGAGCTCACCAGGC +
Preference number: 6 (lower is better)
Translates to: RPPSKVKCRCTM*ASSSPTMSSPG
Trigger: GCCTGGTGAGCTCATAGTAGGCGAAGACGAGGCCCACATTGTGCAACGGCACTTGACCTTTGAAGGTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CTCCAGCCCACAGATGCTGCAAGTCTTCATTTGGAGTaGCTGAGGTTCAAAGCGATCACAGCGGGCGCCAAG +
Preference number: 6 (lower is better)
Translates to: LQPTDAASLHLE*LRFKAITAGAK
Trigger: CTTGGCGCCCGCTGTGATCGCTTTGAACCTCAGCCACTCCAAATGAAGACTTGCAGCATCTGTGGGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp GCCAGCCCTGTGGACCCACAGTTTCCCATGGATTCATaGCAGAATCGGCCTTGGAAGCCAGGGGCACATGTA +
Preference number: 6 (lower is better)
Translates to: ASPVDPQFPMDS*QNRPWKPGAHV
Trigger: TACATGTGCCCCTGGCTTCCAAGGCCGATTCTGCAATGAATCCATGGGAAACTGTGGGTCCACAGGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp CTCACACATCTCACAGGCTGTCCCATGGAACCCCTCTaGGCAGCGACATTCCCCATTGCCCAGGAATCTGTC +
Preference number: 6 (lower is better)
Translates to: LTHLTGCPMEPL*AATFPIAQESV
Trigger: GACAGATTCCTGGGCAATGGGGAATGTCGCTGCCAAGAGGGGTTCCATGGGACAGCCTGTGAGATGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp CCATGTACGCAGTTGCACACTGATTGGCAGTCAGGCCCAAATCTGTaGGGGTCTCGGCACTCCTGGCAGACTGAACCGCTGAAGTTTTCC +
Preference number: 6 (lower is better)
Translates to: PCTQLHTDWQSGPNL*GSRHSWQTEPLKFS
Trigger: GGAAAACTTCAGCGGTTCAGTCTGCCAGGAGTGCCGAGACCCCAACAGATTTGGGCCTGACTGCCAATCAGTGTGCAACTGCGTACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp TTGTTGTTAATGCTTGTCATACCTGGTCGGCACATACAGGTGGCCTaGCCTGGCCCACGGTACAGGCAGAAGGTAGAGTTGCTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: LLLMLVIPGRHIQVA*PGPRYRQKVELLGQ
Trigger: CTGCCCCAGCAACTCTACCTTCTGCCTGTACCGTGGGCCAGGCAAGGCCACCTGTATGTGCCGACCAGGTATGACAAGCATTAACAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp TCAGCGTTCTCTGAGCAGCCACCACGGTCTGGGCGCGAGCAAGGATaGCTGCGTTTGCAGGAGAAGCCATTACCTTCAAAACCATCATGG +
Preference number: 6 (lower is better)
Translates to: SAFSEQPPRSGREQG*LRLQEKPLPSKPSW
Trigger: CCATGATGGTTTTGAAGGTAATGGCTTCTCCTGCAAACGCAGCAATCCTTGCTCGCGCCCAGACCGTGGTGGCTGCTCAGAGAACGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp AGTGTGTCCAGACAGTGTAGTGATATAGCCCTGGTCCAGCATCTCTaGGCTCCACAGCTTCCGGCAGCCAACCACGTGGTAGCGAAACAC +
Preference number: 6 (lower is better)
Translates to: SVSRQCSDIALVQHL*APQLPAANHVVAKH
Trigger: GTGTTTCGCTACCACGTGGTTGGCTGCCGGAAGCTGTGGAGCCAAGAGATGCTGGACCAGGGCTATATCACTACACTGTCTGGACACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp CTGGTCAATGCCATAAGCCAGGCCACCTTCAAAGGTCAAGTGCCGTaGCACAATGTGGGCCTCGTCTTCGCCTACTATGAGCTCACCAGG +
Preference number: 6 (lower is better)
Translates to: LVNAISQATFKGQVP*HNVGLVFAYYELTR
Trigger: CCTGGTGAGCTCATAGTAGGCGAAGACGAGGCCCACATTGTGCAACGGCACTTGACCTTTGAAGGTGGCCTGGCTTATGGCATTGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp TGCCAGCGTGTCGTGGCACTCAGTGTGGCTACTTGTTaGCCATTTAACCGGGCCAACTCCTCCTCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: CQRVVALSVATC*PFNRANSSSEK
Trigger: CTTCTCAGAGGAGGAGTTGGCCCGGTTAAATGGTCAACAAGTAGCCACACTGAGTGCCACGACACGCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp TACTTGTTCCGTAGGAGCTCCAGTCCAACTCTCCCATaGCAGGTGATGCCGTCCCCCACAGTATGTGTTGCG +
Preference number: 6 (lower is better)
Translates to: YLFRRSSSPTLP*QVMPSPTVCVA
Trigger: CGCAACACATACTGTGGGGGACGGCATCACCTGTCATGGGAGAGTTGGACTGGAGCTCCTACGGAACAAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CACCACGGTCTGGGCGCGAGCAAGGATTGCTGCGTTTaGAGGAGAAGCCATTACCTTCAAAACCATCATGGC +
Preference number: 6 (lower is better)
Translates to: HHGLGASKDCCV*RRSHYLQNHHG
Trigger: GCCATGATGGTTTTGAAGGTAATGGCTTCTCCTGCAAACGCAGCAATCCTTGCTCGCGCCCAGACCGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp AGCAGCCACCACGGTCTGGGCGCGAGCAAGGATTGCTaGGTTTGCAGGAGAAGCCATTACCTTCAAAACCAT +
Preference number: 6 (lower is better)
Translates to: SSHHGLGASKDC*VCRRSHYLQNH
Trigger: ATGGTTTTGAAGGTAATGGCTTCTCCTGCAAACGCAGCAATCCTTGCTCGCGCCCAGACCGTGGTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp AGCCTCCATTGTTCTGGGAACAGGGGTCCAGAAGCTTaGAAGTCTGAATGCCATCGCCACTGTAGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: SLHCSGNRGPEA*KSECHRHCSPH
Trigger: GTGAGGGCTACAGTGGCGATGGCATTCAGACTTGCAAGCTTCTGGACCCCTGTTCCCAGAACAATGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp GGCCATCTCCCGTGCTTTTGCACACAGCATAAGGACTaGAGCCTCCATTGTTCTGGGAACAGGGGTCCAGAA +
Preference number: 6 (lower is better)
Translates to: GHLPCFCTQHKD*SLHCSGNRGPE
Trigger: TTCTGGACCCCTGTTCCCAGAACAATGGAGGCTGCAGTCCTTATGCTGTGTGCAAAAGCACGGGAGATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp TTGCGTCACAGGAACACGTCCTCTGGCCATCTCCCGTaGTTTTGCACACAGCATAAGGACTGCAGCCTCCAT +
Preference number: 6 (lower is better)
Translates to: LRHRNTSSGHLP*FCTQHKDCSLH
Trigger: ATGGAGGCTGCAGTCCTTATGCTGTGTGCAAAAGCACGGGAGATGGCCAGAGGACGTGTTCCTGTGACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp GCTGGTCCCTTCTTGCCATGGGGAGAAGTCATCGTCTaGATTATCTTCTGCAGTCTGGGGAGGCATGAGCAG +
Preference number: 6 (lower is better)
Translates to: AGPFLPWGEVIV*IIFCSLGRHEQ
Trigger: CTGCTCATGCCTCCCCAGACTGCAGAAGATAATGCAGACGATGACTTCTCCCCATGGCAAGAAGGGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000160024.8
CDS CCA 72 bp GCATATCTCATGTTTTTGAAAGTGATGGTGACCTCCTaGCCAGCCAGCGTCCACCACCTGCGTGTGCTTGGG +
Preference number: 6 (lower is better)
Translates to: AYLMFLKVMVTS*PASVHHLRVLG
Trigger: CCCAAGCACACGCAGGTGGTGGACGCTGGCTGGCCAGGAGGTCACCATCACTTTCAAAAACATGAGATATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp AAAGACTGTGAAGGGCCCAGGCCCATCCAGGATAGATaGCAGCCCACAGTTCTCCAGGATCGTTTCAAACCG +
Preference number: 6 (lower is better)
Translates to: KDCEGPRPIQDR*QPTVLQDRFKP
Trigger: CGGTTTGAAACGATCCTGGAGAACTGTGGGCTGCCATCTATCCTGGATGGGCCTGGGCCCTTCACAGTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp GCCACAGTCCTCCTGGCACTGCTCTCCATGCTTCTTTaGGTCGGAGCAGATATGACAGGCGATACCCTTGTA +
Preference number: 6 (lower is better)
Translates to: ATVLLALLSMLL*VGADMTGDTLV
Trigger: TACAAGGGTATCGCCTGTCATATCTGCTCCGACCCAAAGAAGCATGGAGAGCAGTGCCAGGAGGACTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp TCACACATCTCACAGGCTGTCCCATGGAACCCCTCTTaGCAGCGACATTCCCCATTGCCCAGGAATCTGTCT +
Preference number: 6 (lower is better)
Translates to: SHISQAVPWNPS*QRHSPLPRNLS
Trigger: AGACAGATTCCTGGGCAATGGGGAATGTCGCTGCCAAGAGGGGTTCCATGGGACAGCCTGTGAGATGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp GCATTGAGATGGAGTGCAATGGAGTTGTCCAGAACTTaGAGTAGTGACGCCAGCAGGTCTCAGGGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: ALRWSAMELSRT*SSDASRSQGCP
Trigger: AGGGCAGCCCTGAGACCTGCTGGCGTCACTACTCCAAGTTCTGGACAACTCCATTGCACTCCATCTCAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS CAA 72 bp CCACCACGGTCTGGGCGCGAGCAAGGATTGCTGCGTTaGCAGGAGAAGCCATTACCTTCAAAACCATCATGG +
Preference number: 6 (lower is better)
Translates to: PPRSGREQGLLR*QEKPLPSKPSW
Trigger: CCATGATGGTTTTGAAGGTAATGGCTTCTCCTGCAAACGCAGCAATCCTTGCTCGCGCCCAGACCGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp TCTGAGCAGCCACCACGGTCTGGGCGCGAGCAAGGATaGCTGCGTTTGCAGGAGAAGCCATTACCTTCAAAA +
Preference number: 6 (lower is better)
Translates to: SEQPPRSGREQG*LRLQEKPLPSK
Trigger: TTTTGAAGGTAATGGCTTCTCCTGCAAACGCAGCAATCCTTGCTCGCGCCCAGACCGTGGTGGCTGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp AGACAGTGTAGTGATATAGCCCTGGTCCAGCATCTCTaGGCTCCACAGCTTCCGGCAGCCAACCACGTGGTA +
Preference number: 6 (lower is better)
Translates to: RQCSDIALVQHL*APQLPAANHVV
Trigger: TACCACGTGGTTGGCTGCCGGAAGCTGTGGAGCCAAGAGATGCTGGACCAGGGCTATATCACTACACTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp GCCATAAGCCAGGCCACCTTCAAAGGTCAAGTGCCGTaGCACAATGTGGGCCTCGTCTTCGCCTACTATGAG +
Preference number: 6 (lower is better)
Translates to: AISQATFKGQVP*HNVGLVFAYYE
Trigger: CTCATAGTAGGCGAAGACGAGGCCCACATTGTGCAACGGCACTTGACCTTTGAAGGTGGCCTGGCTTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp CCTCTTGGAGGCAACAAGACCTGGCTAACAATGTGTAGGATGCCATaGGTAGCAAGGAGGTCGGGGACATCCACAGTGGCATTCTGCACC +
Preference number: 6 (lower is better)
Translates to: PLGGNKTWLTMCRMP*VARRSGTSTVAFCT
Trigger: GGTGCAGAATGCCACTGTGGATGTCCCCGACCTCCTTGCTACCAATGGCATCCTACACATTGTTAGCCAGGTCTTGTTGCCTCCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp ACGGTATCCAGTAAGCTCCACGCATTGAGATGGAGTGCAATGGAGTaGTCCAGAACTTGGAGTAGTGACGCCAGCAGGTCTCAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: TVSSKLHALRWSAME*SRTWSSDASRSQGC
Trigger: GCAGCCCTGAGACCTGCTGGCGTCACTACTCCAAGTTCTGGACAACTCCATTGCACTCCATCTCAATGCGTGGAGCTTACTGGATACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS TCA 72 bp GCTGGTCTTTCTGTCAGGGGTCACCTGACAGGTAGCTaGTCTGTCGCAGGAATGTGGTTTGCAGGAGACATG +
Preference number: 6 (lower is better)
Translates to: AGLSVRGHLTGS*SVAGMWFAGDM
Trigger: CATGTCTCCTGCAAACCACATTCCTGCGACAGATCAGCTACCTGTCAGGTGACCCCTGACAGAAAGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp TTGCACACGCAGCTGGTCTTTCTGTCAGGGGTCACCTaGCAGGTAGCTGATCTGTCGCAGGAATGTGGTTTG +
Preference number: 6 (lower is better)
Translates to: LHTQLVFLSGVT*QVADLSQECGL
Trigger: CAAACCACATTCCTGCGACAGATCAGCTACCTGTCAGGTGACCCCTGACAGAAAGACCAGCTGCGTGTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp ATGGCTGCTCTTAACCGCAGGAACACCAGGCCATTCTaGTTGGCCCTCCGAACCTCATGGAGTAGATGTCCA +
Preference number: 6 (lower is better)
Translates to: MAALNRRNTRPF*LALRTSWSRCP
Trigger: TGGACATCTACTCCATGAGGTTCGGAGGGCCAATCAGAATGGCCTGGTGTTCCTGCGGTTAAGAGCAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp CATTGGGATCGCACTTCTTGGGACATTGATGATCAGTaGTTTTCTGGTCACAGCGGAGACCCTGCCAGCCCG +
Preference number: 6 (lower is better)
Translates to: HWDRTSWDIDDQ*FSGHSGDPASP
Trigger: CGGGCTGGCAGGGTCTCCGCTGTGACCAGAAAATCACTGATCATCAATGTCCCAAGAAGTGCGATCCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp AGGTCAGACGCCAAGGCCTCAATGTTGCGAATCATATaGCCCCGCAAAATGGCTGCCAGTTTGTCACGGTGG +
Preference number: 6 (lower is better)
Translates to: RSDAKASMLRII*PRKMAASLSRW
Trigger: CCACCGTGACAAACTGGCAGCCATTTTGCGGGGTCATATGATTCGCAACATTGAGGCCTTGGCGTCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp GTAGCAAGGAGGTCGGGGACATCCACAGTGGCATTCTaGACCCAGACTTTCCCACTGATGTTGTGTATCTGC +
Preference number: 6 (lower is better)
Translates to: VARRSGTSTVAF*TQTFPLMLCIC
Trigger: GCAGATACACAACATCAGTGGGAAAGTCTGGGTGCAGAATGCCACTGTGGATGTCCCCGACCTCCTTGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CACAGGAACACGTCCTCTGGCCATCTCCCGTGCTTTTaGACACAGCATAAGGACTGCAGCCTCCATTGTTCT +
Preference number: 6 (lower is better)
Translates to: HRNTSSGHLPCF*TQHKDCSLHCS
Trigger: AGAACAATGGAGGCTGCAGTCCTTATGCTGTGTGCAAAAGCACGGGAGATGGCCAGAGGACGTGTTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp TGGAAGAGCCAGTTCTTTCTATCAGGAGGCAAGGCTTaGAGGGCAGAATCTGTGGGCCACAGCATCGTGAAG +
Preference number: 6 (lower is better)
Translates to: WKSQFFLSGGKA*RAESVGHSIVK
Trigger: CTTCACGATGCTGTGGCCCACAGATTCTGCCCTGCAAGCCTTGCCTCCTGATAGAAAGAACTGGCTCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CTGCTCTTAACCGCAGGAACACCAGGCCATTCTGATTaGCCCTCCGAACCTCATGGAGTAGATGTCCATAGC +
Preference number: 6 (lower is better)
Translates to: LLLTAGTPGHSD*PSEPHGVDVHS
Trigger: GCTATGGACATCTACTCCATGAGGTTCGGAGGGCCAATCAGAATGGCCTGGTGTTCCTGCGGTTAAGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CACTGTTGTTGCCCTGGGTCTCCAGAGAGTGATTTGTaGGCACAAAGATGGTGTAGGCTTTGGCAGCCTCGA +
Preference number: 6 (lower is better)
Translates to: HCCCPGSPESDL*AQRWCRLWQPR
Trigger: TCGAGGCTGCCAAAGCCTACACCATCTTTGTGCCCACAAATCACTCTCTGGAGACCCAGGGCAACAACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CGCAGGCAGGGATTCCAGCAGAGTCCTGGATGCAGTTaGCATTGGGATCGCACTTCTTGGGACATTGATGAT +
Preference number: 6 (lower is better)
Translates to: RRQGFQQSPGCS*HWDRTSWDIDD
Trigger: ATCATCAATGTCCCAAGAAGTGCGATCCCAATGCCAACTGCATCCAGGACTCTGCTGGAATCCCTGCCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CGCAAAATGGCTGCCAGTTTGTCACGGTGGTCCTCGTaGAAGAGCCAGTTCTTTCTATCAGGAGGCAAGGCT +
Preference number: 6 (lower is better)
Translates to: RKMAASLSRWSS*KSQFFLSGGKA
Trigger: AGCCTTGCCTCCTGATAGAAAGAACTGGCTCTTCCACGAGGACCACCGTGACAAACTGGCAGCCATTTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CAGCTGGGCTTCCAGACGGTGGTGACACAGTTTCGGTaGCAGCCCCTACTCATGTGGTTACGATTCCAAAAA +
Preference number: 6 (lower is better)
Translates to: QLGFQTVVTQFR*QPLLMWLRFQK
Trigger: TTTTTGGAATCGTAACCACATGAGTAGGGGCTGCCACCGAAACTGTGTCACCACCGTCTGGAAGCCCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS CCA 72 bp GCACAGAGTTCACAGGCTGTCCCAGCAAAACCCGGATaGCAATTACACTGCCCACTTCCACGTATACCATCC +
Preference number: 6 (lower is better)
Translates to: AQSSQAVPAKPG*QLHCPLPRIPS
Trigger: GGATGGTATACGTGGAAGTGGGCAGTGTAATTGCCATCCGGGTTTTGCTGGGACAGCCTGTGAACTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS CCA 72 bp GACAGAAACCAGGGTTGGGCTGGTCCCTTCTTGCCATaGGGAGAAGTCATCGTCTGCATTATCTTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: DRNQGWAGPFLP*GEVIVCIIFCL
Trigger: CAGGCAGAAGATAATGCAGACGATGACTTCTCCCCATGGCAAGAAGGGACCAGCCCAACCCTGGTTTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp ACAGTGGCATTCTGCACCCAGACTTTCCCACTGATGTaGTGTATCTGCCAGCGTGTCGTGGCACTCAGTGTG +
Preference number: 6 (lower is better)
Translates to: TVAFCTQTFPLM*CICQRVVALSV
Trigger: CACACTGAGTGCCACGACACGCTGGCAGATACACAACATCAGTGGGAAAGTCTGGGTGCAGAATGCCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp GGCAACAAGACCTGGCTAACAATGTGTAGGATGCCATaGGTAGCAAGGAGGTCGGGGACATCCACAGTGGCA +
Preference number: 6 (lower is better)
Translates to: GNKTWLTMCRMP*VARRSGTSTVA
Trigger: TGCCACTGTGGATGTCCCCGACCTCCTTGCTACCAATGGCATCCTACACATTGTTAGCCAGGTCTTGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp GGACACTGTTGTTGCCCTGGGTCTCCAGAGAGTGATTaGTGGGCACAAAGATGGTGTAGGCTTTGGCAGCCT +
Preference number: 6 (lower is better)
Translates to: GHCCCPGSPESD*WAQRWCRLWQP
Trigger: AGGCTGCCAAAGCCTACACCATCTTTGTGCCCACAAATCACTCTCTGGAGACCCAGGGCAACAACAGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp GCATGTGGCACAAAGACAGTGAAAGGTCCGTCACCCTaGAGCTCCTTGTATTCCAGGAGGTGGAGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: ACGTKTVKGPSP*SSLYSRRWRLK
Trigger: CTTCAGCCTCCACCTCCTGGAATACAAGGAGCTCAAGGGTGACGGACCTTTCACTGTCTTTGTGCCACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp GTGGAAGAGCCAGTTCTTTCTATCAGGAGGCAAGGCTaGCAGGGCAGAATCTGTGGGCCACAGCATCGTGAA +
Preference number: 6 (lower is better)
Translates to: VEEPVLSIRRQG*QGRICGPQHRE
Trigger: TTCACGATGCTGTGGCCCACAGATTCTGCCCTGCAAGCCTTGCCTCCTGATAGAAAGAACTGGCTCTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp TCGCAGGAATGTGGTTTGCAGGAGACATGGCACCCCTCAGAAGCGTaGTTGTTAATGCTTGTCATACCTGGTCGGCACATACAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: SQECGLQETWHPSEA*LLMLVIPGRHIQVA
Trigger: GGCCACCTGTATGTGCCGACCAGGTATGACAAGCATTAACAACAACGCTTCTGAGGGGTGCCATGTCTCCTGCAAACCACATTCCTGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp CTATACCCAGGACACTGTTGTTGCCCTGGGTCTCCAGAGAGTGATTaGTGGGCACAAAGATGGTGTAGGCTTTGGCAGCCTCGATTTGGG +
Preference number: 6 (lower is better)
Translates to: LYPGHCCCPGSPESD*WAQRWCRLWQPRFG
Trigger: CCCAAATCGAGGCTGCCAAAGCCTACACCATCTTTGTGCCCACAAATCACTCTCTGGAGACCCAGGGCAACAACAGTGTCCTGGGTATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp AGGCTAAGACCTGAGTGGGCAGGAAGCAATGTCCCCCGGCTGGCATaGATACTCAGAAAGGTGGCGTTAGAAGCGTGGAGTTCTAGATCT +
Preference number: 6 (lower is better)
Translates to: RLRPEWAGSNVPRLA*ILRKVALEAWSSRS
Trigger: AGATCTAGAACTCCACGCTTCTAACGCCACCTTTCTGAGTATCAATGCCAGCCGGGGGACATTGCTTCCTGCCCACTCAGGTCTTAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp CTCAATGTTGCGAATCATATGACCCCGCAAAATGGCTaGCAGTTTGTCACGGTGGTCCTCGTGGAAGAGCCA +
Preference number: 6 (lower is better)
Translates to: LNVANHMTPQNG*QFVTVVLVEEP
Trigger: TGGCTCTTCCACGAGGACCACCGTGACAAACTGGCAGCCATTTTGCGGGGTCATATGATTCGCAACATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp GAGAGTGATTTGTGGGCACAAAGATGGTGTAGGCTTTaGCAGCCTCGATTTGGGCCACCAGTTTGTGGTGCT +
Preference number: 6 (lower is better)
Translates to: ESDLWAQRWCRL*QPRFGPPVCGA
Trigger: AGCACCACAAACTGGTGGCCCAAATCGAGGCTGCCAAAGCCTACACCATCTTTGTGCCCACAAATCACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp AGGCCTCAATGTTGCGAATCATATGACCCCGCAAAATaGCTGCCAGTTTGTCACGGTGGTCCTCGTGGAAGA +
Preference number: 6 (lower is better)
Translates to: RPQCCESYDPAK*LPVCHGGPRGR
Trigger: TCTTCCACGAGGACCACCGTGACAAACTGGCAGCCATTTTGCGGGGTCATATGATTCGCAACATTGAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp GACAGAAACCAGGGTTGGGCTGGTCCCTTCTTGCCATaGGGAGAAGTCATCGTCTGCATTATCTTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: DRNQGWAGPFLP*GEVIVCIIFCS
Trigger: ACTGCAGAAGATAATGCAGACGATGACTTCTCCCCATGGCAAGAAGGGACCAGCCCAACCCTGGTTTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000160024.8
CDS CAA 90 bp AGCAGGATGCGTCCCTCCTCAGAGATATTCACAGTCAGGACCTGGTaGGCCATGGTGAGGACACGTCCTTTAGAGATGAGCTTCTCAACT +
Preference number: 6 (lower is better)
Translates to: SRMRPSSEIFTVRTW*AMVRTRPLEMSFST
Trigger: AGTTGAGAAGCTCATCTCTAAAGGACGTGTCCTCACCATGGCCAACCAGGTCCTGACTGTGAATATCTCTGAGGAGGGACGCATCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp AGCTGGCGATGGGCCCGTATCCTAGCCAGCTCATCCTGTGACATGTaGCTTATTAAGTCAGCATGTGGCACAAAGACAGTGAAAGGTCCG +
Preference number: 6 (lower is better)
Translates to: SWRWARILASSSCDM*LIKSACGTKTVKGP
Trigger: CGGACCTTTCACTGTCTTTGTGCCACATGCTGACTTAATAAGCAACATGTCACAGGATGAGCTGGCTAGGATACGGGCCCATCGCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 90 bp ATTAAGTCAGCATGTGGCACAAAGACAGTGAAAGGTCCGTCACCCTaGAGCTCCTTGTATTCCAGGAGGTGGAGGCTGAAGAAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: IKSACGTKTVKGPSP*SSLYSRRWRLKKEA
Trigger: TGCCTCCTTCTTCAGCCTCCACCTCCTGGAATACAAGGAGCTCAAGGGTGACGGACCTTTCACTGTCTTTGTGCCACATGCTGACTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp GGCTGTGACTCTGCTGTCGGCAGGAAGAGTGATGCTTaGATTCTTGAACCACTGGGAGAAGGCAGAGAAATG +
Preference number: 6 (lower is better)
Translates to: GCDSAVGRKSDA*ILEPLGEGREM
Trigger: CATTTCTCTGCCTTCTCCCAGTGGTTCAAGAATTCAAGCATCACTCTTCCTGCCGACAGCAGAGTCACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp GCTGGTCCCTTCTTGCCATGGGGAGAAGTCATCGTCTaGATTATCTTCTGCCTGAAAGGCAGAGAAGCTGAA +
Preference number: 6 (lower is better)
Translates to: AGPFLPWGEVIV*IIFCLKGREAE
Trigger: TTCAGCTTCTCTGCCTTTCAGGCAGAAGATAATGCAGACGATGACTTCTCCCCATGGCAAGAAGGGACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp GCTGATCTGTCGCAGGAATGTGGTTTGCAGGAGACATaGCACCCCTCAGAAGCGTTGTTGTTAATGCTTGTC +
Preference number: 6 (lower is better)
Translates to: ADLSQECGLQET*HPSEALLLMLV
Trigger: GACAAGCATTAACAACAACGCTTCTGAGGGGTGCCATGTCTCCTGCAAACCACATTCCTGCGACAGATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp CTGGCATTGATACTCAGAAAGGTGGCGTTAGAAGCGTaGAGTTCTAGATCTGGGCCACTCAGCGTCATGTTG +
Preference number: 6 (lower is better)
Translates to: LALILRKVALEA*SSRSGPLSVML
Trigger: CAACATGACGCTGAGTGGCCCAGATCTAGAACTCCACGCTTCTAACGCCACCTTTCTGAGTATCAATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp GGTTTGCAGGAGACATGGCACCCCTCAGAAGCGTTGTaGTTAATGCTTGTCATACCTGGTCGGCACATACAG +
Preference number: 6 (lower is better)
Translates to: GLQETWHPSEAL*LMLVIPGRHIQ
Trigger: CTGTATGTGCCGACCAGGTATGACAAGCATTAACAACAACGCTTCTGAGGGGTGCCATGTCTCCTGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp AGTAAGCTCCACGCATTGAGATGGAGTGCAATGGAGTaGTCCAGAACTTGGAGTAGTGACGCCAGCAGGTCT +
Preference number: 6 (lower is better)
Translates to: SKLHALRWSAME*SRTWSSDASRS
Trigger: AGACCTGCTGGCGTCACTACTCCAAGTTCTGGACAACTCCATTGCACTCCATCTCAATGCGTGGAGCTTACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS TCA 72 bp GGTTGCAGTAGTCAGCACAGCCTTTCTTCAGAACGTTaGGCCCATTTGGGTCGTGGATATAAACGCACTCCT +
Preference number: 6 (lower is better)
Translates to: GCSSQHSLSSER*AHLGRGYKRTP
Trigger: AGGAGTGCGTTTATATCCACGACCCAAATGGGCTCAACGTTCTGAAGAAAGGCTGTGCTGACTACTGCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp GTCAGCACAGCCTTTCTTCAGAACGTTGAGCCCATTTaGGTCGTGGATATAAACGCACTCCTTGGGGAAGAT +
Preference number: 6 (lower is better)
Translates to: VSTAFLQNVEPI*VVDINALLGED
Trigger: ATCTTCCCCAAGGAGTGCGTTTATATCCACGACCCAAATGGGCTCAACGTTCTGAAGAAAGGCTGTGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp TCGGCAGGAAGAGTGATGCTTGAATTCTTGAACCACTaGGAGAAGGCAGAGAAATGGGCATTTGCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: SAGRVMLEFLNH*EKAEKWAFASS
Trigger: ACTGGAGGCAAATGCCCATTTCTCTGCCTTCTCCCAGTGGTTCAAGAATTCAAGCATCACTCTTCCTGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp TCCTGGAAATGTAGGTCAGTGCACAAAGCATCAGTGTaGCAAGGTGATGATCCTCCCAAGCATCTGTCCACA +
Preference number: 6 (lower is better)
Translates to: SWKCRSVHKASV*QGDDPPKHLST
Trigger: TGTGGACAGATGCTTGGGAGGATCATCACCTTGCCACACTGATGCTTTGTGCACTGACCTACATTTCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp TGTGGTTTGCAGGAGACATGGCACCCCTCAGAAGCGTaGTTGTTAATGCTTGTCATACCTGGTCGGCACATA +
Preference number: 6 (lower is better)
Translates to: CGLQETWHPSEA*LLMLVIPGRHI
Trigger: TATGTGCCGACCAGGTATGACAAGCATTAACAACAACGCTTCTGAGGGGTGCCATGTCTCCTGCAAACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CAA 72 bp TGGGCCCGTATCCTAGCCAGCTCATCCTGTGACATGTaGCTTATTAAGTCAGCATGTGGCACAAAGACAGTG +
Preference number: 6 (lower is better)
Translates to: WARILASSSCDM*LIKSACGTKTV
Trigger: CACTGTCTTTGTGCCACATGCTGACTTAATAAGCAACATGTCACAGGATGAGCTGGCTAGGATACGGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS GCA 72 bp TGGCAATCCACACAAGAACCCAGCACAGTCTGGTGCTaGTCTTCATCACAGTGCTTAGGTAAGATAGGCAAA +
Preference number: 6 (lower is better)
Translates to: WQSTQEPSTVWC*SSSQCLGKIGK
Trigger: TTTGCCTATCTTACCTAAGCACTGTGATGAAGAGCAGCACCAGACTGTGCTGGGTTCTTGTGTGGATTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS CCA 72 bp AAGGCTTGGCAATCCACACAAGAACCCAGCACAGTCTaGTGCTGCTCTTCATCACAGTGCTTAGGTAAGATA +
Preference number: 6 (lower is better)
Translates to: KAWQSTQEPSTV*CCSSSQCLGKI
Trigger: TATCTTACCTAAGCACTGTGATGAAGAGCAGCACCAGACTGTGCTGGGTTCTTGTGTGGATTGCCAAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14
CDS TCA 72 bp CCAAAAACTAGACGGTATCCAGTAAGCTCCACGCATTaGGATGGAGTGCAATGGAGTTGTCCAGAACTTGGA +
Preference number: 6 (lower is better)
Translates to: PKTRRYPVSSTH*DGVQWSCPELG
Trigger: TCCAAGTTCTGGACAACTCCATTGCACTCCATCTCAATGCGTGGAGCTTACTGGATACCGTCTAGTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000036618.14
ENSMUST00000159249.2
CDS GCA 72 bp CTTGAACCACTGGGAGAAGGCAGAGAAATGGGCATTTaGCTCCAGTTCCTGGATAATATCTCCATAGCAACT +
Preference number: 6 (lower is better)
Translates to: LEPLGEGREMGI*LQFLDNISIAT
Trigger: AGTTGCTATGGAGATATTATCCAGGAACTGGAGGCAAATGCCCATTTCTCTGCCTTCTCCCAGTGGTTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036618.14