Pregenerated sensors for ST8SIA6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003418Ensembl transcript IDs: ENSMUST00000003509.10
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTGGCAGTGGCGATGGCTTCCTGATCATGCTCAGGTCAGAACTTTaGCAGTGTACACTTGGAACGCCCTTGGCGTACGTCAGTCATCGA | + |
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Preference number: 1 (lower is better) Translates to: VGSGDGFLIMLRSEL*QCTLGTPLAYVSHR Trigger: TCGATGACTGACGTACGCCAAGGGCGTTCCAAGTGTACACTGGCAAAGTTCTGACCTGAGCATGATCAGGAAGCCATCGCCACTGCCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR TCA 90 bp | CAGTGTACACTTGGAACGCCCTTGGCGTACGTCAGTCATCGAGACTaGGTTTCGTTCTCTTCCCTCTTTGTGTTTACACACTGGGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: QCTLGTPLAYVSHRD*VSFSSLFVFTHWGN Trigger: ATTTCCCCAGTGTGTAAACACAAAGAGGGAAGAGAACGAAACTCAGTCTCGATGACTGACGTACGCCAAGGGCGTTCCAAGTGTACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR GCA 90 bp | GGGTGGCTTTGGTCTAGACAAGTGGGAGAGCGCCTTTGTAATTCATaGTTTCTCTGTGCCTTCTTCTATTGGCTTTTTGGAGATGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: GWLWSRQVGERLCNS*FLCAFFYWLFGDAV Trigger: CACAGCATCTCCAAAAAGCCAATAGAAGAAGGCACAGAGAAAGCATGAATTACAAAGGCGCTCTCCCACTTGTCTAGACCAAAGCCACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR TCA 90 bp | TGTGACTTTGTAGTCCTTGAGTCTCTCTGGAGTCTGCTTCTCATCTaGCATGGTGCTGTGCAGGCACGTATTTCTTCCCATGTAATGATC | + |
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Preference number: 1 (lower is better) Translates to: CDFVVLESLWSLLLI*HGAVQARISSHVMI Trigger: GATCATTACATGGGAAGAAATACGTGCCTGCACAGCACCATGTCAGATGAGAAGCAGACTCCAGAGAGACTCAAGGACTACAAAGTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR CCA 90 bp | GGAGAGCGCCTTTGTAATTCATGCTTTCTCTGTGCCTTCTTCTATTaGCTTTTTGGAGATGCTGTGACACATCCACTCCACCTCCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: GERLCNSCFLCAFFY*LFGDAVTHPLHLLK Trigger: TTTCAGGAGGTGGAGTGGATGTGTCACAGCATCTCCAAAAAGCCAATAGAAGAAGGCACAGAGAAAGCATGAATTACAAAGGCGCTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR TCA 90 bp | ACCAAGCAACAGTTTTTACAAACAGCATGTCAGCTTTGGGAACTGTaGACCATCAGTCACAGTACTTTTTGTGCCATGGCAGTGATTTGC | + |
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Preference number: 1 (lower is better) Translates to: TKQQFLQTACQLWEL*TISHSTFCAMAVIC Trigger: GCAAATCACTGCCATGGCACAAAAAGTACTGTGACTGATGGTTCACAGTTCCCAAAGCTGACATGCTGTTTGTAAAAACTGTTGCTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR CCA 90 bp | TCTGGGAAGGAAAATCAAAGGAGGAACATGTTGGAGACATGCAGATaGTATACAACGCATCCAGTTCACAGCACCAAGCAACAGTTTTTA | + |
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Preference number: 1 (lower is better) Translates to: SGKENQRRNMLETCR*YTTHPVHSTKQQFL Trigger: TAAAAACTGTTGCTTGGTGCTGTGAACTGGATGCGTTGTATACCATCTGCATGTCTCCAACATGTTCCTCCTTTGATTTTCCTTCCCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR TCA 90 bp | CATGTGAGAAGCAATGGATGTTTGAACTACTTTATGTCATTGAGTTaGTCCTGTCAGTGGGAGAGAGAATTGCAGAATCCCAAAGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: HVRSNGCLNYFMSLS*SCQWERELQNPKAG Trigger: TCCTGCTTTGGGATTCTGCAATTCTCTCTCCCACTGACAGGATCAACTCAATGACATAAAGTAGTTCAAACATCCATTGCTTCTCACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR TCA 90 bp | AGGTATTTTATCCGCCCTTCAGAACCACACATAAACAGGAAATACTaGACACACCTGGATTTGGGGGTTAAGTATAGAGAAGGACTCTTA | + |
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Preference number: 1 (lower is better) Translates to: RYFIRPSEPHINRKY*THLDLGVKYREGLL Trigger: TAAGAGTCCTTCTCTATACTTAACCCCCAAATCCAGGTGTGTTCAGTATTTCCTGTTTATGTGTGGTTCTGAAGGGCGGATAAAATACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR TCA 90 bp | CTGCTTTCAGATTCCATGTGGTTAATCTACAAGTCTACAAGGAGTTaGTGGTTACTTTTGTGCTTGGATCTTGATGGAAGGTTGAGATAT | + |
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Preference number: 1 (lower is better) Translates to: LLSDSMWLIYKSTRS*WLLLCLDLDGRLRY Trigger: ATATCTCAACCTTCCATCAAGATCCAAGCACAAAAGTAACCATCAACTCCTTGTAGACTTGTAGATTAACCACATGGAATCTGAAAGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR TCA 90 bp | ATAAAGGTGGGAATGGCTATCATGGATAGGAACAAGGAAGCATTCTaGGAGACCCTGGCTCAAATCAAATTCTATGATGATTTGAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: IKVGMAIMDRNKEAF*ETLAQIKFYDDLKN Trigger: ATTTTTCAAATCATCATAGAATTTGATTTGAGCCAGGGTCTCTCAGAATGCTTCCTTGTTCCTATCCATGATAGCCATTCCCACCTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR GCA 90 bp | TCTAGTTCAATGTTAGTAAAATACTTTGTGGGAGATAAGAATGGATaGGTCCCTGGCTGCAGTAAAGCTACTGATGTATGTTTTATCACT | + |
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Preference number: 1 (lower is better) Translates to: SSSMLVKYFVGDKNG*VPGCSKATDVCFIT Trigger: AGTGATAAAACATACATCAGTAGCTTTACTGCAGCCAGGGACGCATCCATTCTTATCTCCCACAAAGTATTTTACTAACATTGAACTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR TCA 90 bp | CAAGGAGTTGATGGTTACTTTTGTGCTTGGATCTTGATGGAAGGTTaGGATATTATTATCCACCATTACGAAACAAAAAGAACTGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: QGVDGYFCAWILMEG*DIIIHHYETKRTEL Trigger: AAGCTCAGTTCTTTTTGTTTCGTAATGGTGGATAATAATATCTCAACCTTCCATCAAGATCCAAGCACAAAAGTAACCATCAACTCCTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR CCA 90 bp | CATGTAGGCCTCATCTCCTATGCTCTTACTTTTTGGGAAAATCGATaGATGAACAGAATATACAGACATAAGCATTTAATGTCAAGTAAC | + |
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Preference number: 1 (lower is better) Translates to: HVGLISYALTFWENR*MNRIYRHKHLMSSN Trigger: GTTACTTGACATTAAATGCTTATGTCTGTATATTCTGTTCATCCATCGATTTTCCCAAAAAGTAAGAGCATAGGAGATGAGGCCTACATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR TCA 90 bp | CTACAAGTCTACAAGGAGTTGATGGTTACTTTTGTGCTTGGATCTTaGTGGAAGGTTGAGATATTATTATCCACCATTACGAAACAAAAA | + |
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Preference number: 1 (lower is better) Translates to: LQVYKELMVTFVLGS*WKVEILLSTITKQK Trigger: TTTTTGTTTCGTAATGGTGGATAATAATATCTCAACCTTCCATCAAGATCCAAGCACAAAAGTAACCATCAACTCCTTGTAGACTTGTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR CCA 90 bp | TGGCAAATCTCTGGGGGACAAAGAGAAAGCCATGCTTGCTCAGGTAGGAAGCATGGGGGCGGGTGGCTTTaGTCTAGACAAGTGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: WQISGGQRESHACSGRKHGGGWL*SRQVGE Trigger: CTCTCCCACTTGTCTAGACCAAAGCCACCCGCCCCC...ATGCTTCCTACCTGAGCAAGCATGGCTTTCTCTTTGTCCCCCAGAGATTTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR TCA 90 bp | ATAAGCCACCCACTTCTGTTAGATGTGGATTCCTCTAAAGAGAGCTTGAGTAACGTGGAGGCTGCAAAGTaGGTGGGGGCGGGTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: ISHPLLLDVDSSKESLSNVEAAK*VGAGGF Trigger: AAAGCCACCCGCCCCCACTCACTTTGCAGCCTCCAC...GTTACTCAAGCTCTCTTTAGAGGAATCCACATCTAACAGAAGTGGGTGGCTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR TCA 90 bp | TGGCAAATCTCTGGGGGACAAAGAGAAAGCCATGCTTGCTCAGGTAGGAAGCATGAAGGTGAGAATGAGTaGCTCGTGGAGGCTGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: WQISGGQRESHACSGRKHEGENE*LVEAAK Trigger: CTTTGCAGCCTCCACGAGTCACTCATTCTCACCTTC...ATGCTTCCTACCTGAGCAAGCATGGCTTTCTCTTTGTCCCCCAGAGATTTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR GCA 90 bp | CACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGCATCAGCATCACGTGACTCGTGGAGGCTaGAAAGTGAGTGGGGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: HTIIKGPNHQHHHQHQHHVTRGG*KVSGGG Trigger: CCCGCCCCCACTCACTTTGCAGCCTCCACGAGTCAC...GTGATGCTGATGCTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCACAACCTCCTTCCAGCATGCTCATTTGGGTAATCAGAACCAAGCGAACAGAATGAGTGACTCGTaGAGGCTGCAAAGTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: SLTTSFQHAHLGNQNQANRMSDS*RLQSEW Trigger: CCACTCACTTTGCAGCCTCCACGAGTCACTCATTCT...GTTCGCTTGGTTCTGATTACCCAAATGAGCATGCTGGAAGGAGGTTGTGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR GCA 90 bp | TGCTCGCCACACAGAGAGTCTTCGACACTGCTTTCAGATTCCATGTGGTTAATCGCCATGGCAGTGATTTaGTGGAAGTGTCACACTATA | + |
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Preference number: 2 (lower is better) Translates to: CSPHRESSTLLSDSMWLIAMAVI*WKCHTI Trigger: TATAGTGTGACACTTCCAGCAAATCACTGCCATGGC...GATTAACCACATGGAATCTGAAAGCAGTGTCGAAGACTCTCTGTGTGGCGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR TCA 90 bp | TCTGACCACAGCACACAGGAAATCTCAGGGCGTCTTCTGACTACTGTCTATGTTTCCATCCTTGTGATGTaGTTGGCTCTGAATTACTCA | + |
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Preference number: 2 (lower is better) Translates to: SDHSTQEISGRLLTTVYVSILVM*LALNYS Trigger: TGAGTAATTCAGAGCCAATCACATCACAAGGATGGA...AACATAGACAGTAGTCAGAAGACGCCCTGAGATTTCCTGTGTGCTGTGGTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR CCA 90 bp | GTAGGTAAGGGCATTATGGCAAATCTCTGGGGGACAAAGAGAAAGCCATGCTTGAACTACAGACCCATCTaGGAAGGAAAATCAAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VGKGIMANLWGTKRKPCLNYRPI*EGKSKE Trigger: CTCCTTTGATTTTCCTTCCCAGATGGGTCTGTAGTT...CAAGCATGGCTTTCTCTTTGTCCCCCAGAGATTTGCCATAATGCCCTTACCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR CAA 90 bp | AGTTCACAGCACCAAGCAACAGTTTTTACAAACAGCATGTCAGCTTaGGGAACTGTGAACCATCAGTCACAGTACTTTTTGTGCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: SSQHQATVFTNSMSA*GTVNHQSQYFLCHG Trigger: GCCATGGCACAAAAAGTACTGTGACTGATGGTTCACAGTTCCCAAAGCTGACATGCTGTTTGTAAAAACTGTTGCTTGGTGCTGTGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR TCA 90 bp | ATAAGCCACCCACTTCTGTTAGATGTGGATTCCTCTAAAGAGAGCTTGAGTAACAACAAGGAAGCATTCTaGGAGACCCTGGCTCAAATC | + |
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Preference number: 2 (lower is better) Translates to: ISHPLLLDVDSSKESLSNNKEAF*ETLAQI Trigger: GATTTGAGCCAGGGTCTCTCAGAATGCTTCCTTGTT...GTTACTCAAGCTCTCTTTAGAGGAATCCACATCTAACAGAAGTGGGTGGCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR GCA 90 bp | CAGTCATCGAGACTGAGTTTCGTTCTCTTCCCTCTTTGTGTTTACACACTGGGGGTAAAATTTCAGATGTaGTCAGGTTTGGCAGCACAA | + |
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Preference number: 2 (lower is better) Translates to: QSSRLSFVLFPLCVYTLGVKFQM*SGLAAQ Trigger: TTGTGCTGCCAAACCTGAGCACATCTGAAATTTTAC...CCCCAGTGTGTAAACACAAAGAGGGAAGAGAACGAAACTCAGTCTCGATGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR CAA 90 bp | GTTTCGTTCTCTTCCCTCTTTGTGTTTACACACTGGGGAAATGGCTaGATAGTCAGACATGAGAGTTTGAATGCTACCTCTGCTCCTATA | + |
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Preference number: 2 (lower is better) Translates to: VSFSSLFVFTHWGNG*IVRHESLNATSAPI Trigger: TATAGGAGCAGAGGTAGCATTCAAACTCTCATGTCTGACTATCAAGCCATTTCCCCAGTGTGTAAACACAAAGAGGGAAGAGAACGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR TCA 90 bp | TCCTGCTGTTCCCTTTCTTTTACTCAGAATCCACTTAATGTGCCTAAGAATTGGGATGGTCCTCGGGTCTaGTATCAAGTAGATGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: SCCSLSFTQNPLNVPKNWDGPRV*YQVDVH Trigger: GTGAACATCTACTTGATATCAGACCCGAGGACCATC...CCAATTCTTAGGCACATTAAGTGGATTCTGAGTAAAAGAAAGGGAACAGCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGAAGTGTCACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGAACCACCCCTGTCTATaGTCCTTTCAGCACTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: CWKCHTIIKGPNHQHHHQNHPCL*SFQHCV Trigger: AACACAGTGCTGAAAGGATCATAGACAGGGGTGGTT...CTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTGACACTTCCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR GCA 90 bp | AAATCACAACTACAGACCCATCTGGGAAGGAAAATCAAAGGAGGAACATGTTGGTTGGCTTTTTGGAGATaGTGTGACACATCCACTCCA | + |
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Preference number: 2 (lower is better) Translates to: KSQLQTHLGRKIKGGTCWLAFWR*CDTSTP Trigger: TGGAGTGGATGTGTCACAGCATCTCCAAAAAGCCAA...CCAACATGTTCCTCCTTTGATTTTCCTTCCCAGATGGGTCTGTAGTTGTGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR TCA 90 bp | ATAAGCCACCCACTTCTGTTAGATGTGGATTCCTCTAAAGAGAGCTTGAGTAACACTACTTTATGTCATTaGGTTGATCCTGTCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: ISHPLLLDVDSSKESLSNTTLCH*VDPVSG Trigger: CCCACTGACAGGATCAACTCAATGACATAAAGTAGT...GTTACTCAAGCTCTCTTTAGAGGAATCCACATCTAACAGAAGTGGGTGGCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR TCA 90 bp | AAATCACAACTACAGACCCATCTGGGAAGGAAAATCAAAGGAGGAACATGTTGGGAGTGTAATTTCTCATaGAAGCATTCATCTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: KSQLQTHLGRKIKGGTCWECNFS*KHSSPP Trigger: AGGGGGAGATGAATGCTTTCATGAGAAATTACACTC...CCAACATGTTCCTCCTTTGATTTTCCTTCCCAGATGGGTCTGTAGTTGTGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR CCA 90 bp | TTTATCACTAAGCCCATCCCATTTCCCTCTTCTAAGTGGATACTCTTCGTGAATAGATGTGCTCAGGTTTaGCAGCACAAGCATGAAACA | + |
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Preference number: 2 (lower is better) Translates to: FITKPIPFPSSKWILFVNRCAQV*QHKHET Trigger: TGTTTCATGCTTGTGCTGCCAAACCTGAGCACATCT...ATTCACGAAGAGTATCCACTTAGAAGAGGGAAATGGGATGGGCTTAGTGATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR CAA 90 bp | GTGTTTACACACTGGGGAAATGGCTTGATAGTCAGACATGAGAGTTaGAATGCTACCTCTGCTCCTATAATGCAACCTTACGTAAATTAC | + |
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Preference number: 2 (lower is better) Translates to: VFTHWGNGLIVRHES*NATSAPIMQPYVNY Trigger: GTAATTTACGTAAGGTTGCATTATAGGAGCAGAGGTAGCATTCAAACTCTCATGTCTGACTATCAAGCCATTTCCCCAGTGTGTAAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR TCA 90 bp | TTTATCACTAAGCCCATCCCATTTCCCTCTTCTAAGTGGATACTCTTCGTGAATTTTATGTCATTGAGTTaGTCCTGTCAGTGGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: FITKPIPFPSSKWILFVNFMSLS*SCQWER Trigger: TCTCTCCCACTGACAGGATCAACTCAATGACATAAA...ATTCACGAAGAGTATCCACTTAGAAGAGGGAAATGGGATGGGCTTAGTGATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR TCA 90 bp | ATAAGCCACCCACTTCTGTTAGATGTGGATTCCTCTAAAGAGAGCTTGAGTAACCTGCTTTTCTGCCAGTaGCAATATCTTCATATTCTC | + |
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Preference number: 2 (lower is better) Translates to: ISHPLLLDVDSSKESLSNLLFCQ*QYLHIL Trigger: GAGAATATGAAGATATTGTCACTGGCAGAAAAGCAG...GTTACTCAAGCTCTCTTTAGAGGAATCCACATCTAACAGAAGTGGGTGGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR GCA 90 bp | TCAGACATTCTCTTCAGAAAGGGTCTTTGGCACAATTGCACAGTTTCATTACCACGCCTTTGTAATTCATaGTTTCTCTGTGCCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SDILFRKGLWHNCTVSLPRLCNS*FLCAFF Trigger: GAAGAAGGCACAGAGAAAGCATGAATTACAAAGGCG...TGGTAATGAAACTGTGCAATTGTGCCAAAGACCCTTTCTGAAGAGAATGTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR CCA 90 bp | CACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGCATCAGCATCACCTTCTATTGGCTTTTTaGAGATGCTGTGACACATCC | + |
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Preference number: 2 (lower is better) Translates to: HTIIKGPNHQHHHQHQHHLLLAF*RCCDTS Trigger: GGATGTGTCACAGCATCTCCAAAAAGCCAATAGAAG...GTGATGCTGATGCTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR CCA 90 bp | TTTATCACTAAGCCCATCCCATTTCCCTCTTCTAAGTGGATACTCTTCGTGAATTGTGCCTTCTTCTATTaGCTTTTTGGAGATGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: FITKPIPFPSSKWILFVNCAFFY*LFGDAV Trigger: CACAGCATCTCCAAAAAGCCAATAGAAGAAGGCACA...ATTCACGAAGAGTATCCACTTAGAAGAGGGAAATGGGATGGGCTTAGTGATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCTGTTCCCTTTCTTTTACTCAGAATCCACTTAATGTGCCTAAGAATTGGTTTGGTCTAGACAAGTaGGAGAGCGCCTTTGTAATT | + |
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Preference number: 2 (lower is better) Translates to: SCCSLSFTQNPLNVPKNWFGLDK*ESAFVI Trigger: AATTACAAAGGCGCTCTCCCACTTGTCTAGACCAAA...CCAATTCTTAGGCACATTAAGTGGATTCTGAGTAAAAGAAAGGGAACAGCAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR CCA 90 bp | TCAGACATTCTCTTCAGAAAGGGTCTTTGGCACAATTGCACAGTTTCATTACCATGGGAATGGCTATCATaGATAGGAACAAGGAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: SDILFRKGLWHNCTVSLPWEWLS*IGTRKH Trigger: ATGCTTCCTTGTTCCTATCCATGATAGCCATTCCCA...TGGTAATGAAACTGTGCAATTGTGCCAAAGACCCTTTCTGAAGAGAATGTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR CCA 90 bp | ATAAGCCACCCACTTCTGTTAGATGTGGATTCCTCTAAAGAGAGCTTGAGTAACGATGATATGCATATGTaGGGAAGTCTGTGCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: ISHPLLLDVDSSKESLSNDDMHM*GSLCFS Trigger: AGAAAAGCACAGACTTCCCCACATATGCATATCATC...GTTACTCAAGCTCTCTTTAGAGGAATCCACATCTAACAGAAGTGGGTGGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR CCA 90 bp | TTTATCACTAAGCCCATCCCATTTCCCTCTTCTAAGTGGATACTCTTCGTGAATATTATGGCAAATCTCTaGGGGACAAAGAGAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: FITKPIPFPSSKWILFVNIMANL*GTKRKP Trigger: TGGCTTTCTCTTTGTCCCCCAGAGATTTGCCATAAT...ATTCACGAAGAGTATCCACTTAGAAGAGGGAAATGGGATGGGCTTAGTGATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR CCA 90 bp | CTACATTATGTATCTGGCAAACTTAACTCATTAACTTCCCAAGGTGAAAAGATCGCTTCTCATCTGACATaGTGCTGTGCAGGCACGTAT | + |
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Preference number: 2 (lower is better) Translates to: LHYVSGKLNSLTSQGEKIASHLT*CCAGTY Trigger: ATACGTGCCTGCACAGCACCATGTCAGATGAGAAGC...GATCTTTTCACCTTGGGAAGTTAATGAGTTAAGTTTGCCAGATACATAATGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGAAGTGTCACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGTCTACTGATTTATGTTaGAACAGGGATGTCATCGTG | + |
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Preference number: 2 (lower is better) Translates to: CWKCHTIIKGPNHQHHHQSTDLC*NRDVIV Trigger: CACGATGACATCCCTGTTTCAACATAAATCAGTAGA...CTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTGACACTTCCAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR CAA 90 bp | ATAAGCCACCCACTTCTGTTAGATGTGGATTCCTCTAAAGAGAGCTaGAGTAACAGCCAGAAGTCTCAAATTATGTTAAATCACAACTAC | + |
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Preference number: 2 (lower is better) Translates to: ISHPLLLDVDSSKES*SNSQKSQIMLNHNY Trigger: GTAGTTGTGATTTAACATAATTTGAGACTTCTGGCTGTTACTCAAGCTCTCTTTAGAGGAATCCACATCTAACAGAAGTGGGTGGCTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGAAGTGTCACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGATTAAAAGGTGTCGGTaGGACATTAGTAAGAGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: CWKCHTIIKGPNHQHHHQIKRCR*DISKRY Trigger: ATACCTCTTACTAATGTCCCACCGACACCTTTTAAT...CTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTGACACTTCCAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR-3UTR CCA 90 bp | ATAAGCCACCCACTTCTGTTAGATGTGGATTCCTCTAAAGAGAGCTTGAGTAACTATGCTCTTACTTTTTaGGAAAATCGATGGATGAAC | + |
|
Preference number: 2 (lower is better) Translates to: ISHPLLLDVDSSKESLSNYALTF*ENRWMN Trigger: GTTCATCCATCGATTTTCCCAAAAAGTAAGAGCATA...GTTACTCAAGCTCTCTTTAGAGGAATCCACATCTAACAGAAGTGGGTGGCTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CAA 90 bp | AGATGTGCTCAGGTTTGGCAGCACAAGCATGAAACAAGAAATAAATaGATGATATGCATATGTGGGGAAGTCTGTGCTTTTCTAGAAATT | + |
|
Preference number: 2 (lower is better) Translates to: RCAQVWQHKHETRNK*MICICGEVCAFLEI Trigger: AATTTCTAGAAAAGCACAGACTTCCCCACATATGCATATCATCAATTTATTTCTTGTTTCATGCTTGTGCTGCCAAACCTGAGCACATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR-3UTR GCA 90 bp | CTACATTATGTATCTGGCAAACTTAACTCATTAACTTCCCAAGGTGAAAAGATCCGAACAGCTTTCTCCTaGTGTTCCCTTTCTTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: LHYVSGKLNSLTSQGEKIRTAFS*CSLSFT Trigger: AGTAAAAGAAAGGGAACAGCAGGAGAAAGCTGTTCG...GATCTTTTCACCTTGGGAAGTTAATGAGTTAAGTTTGCCAGATACATAATGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR-3UTR TCA 90 bp | AATGCTACCTCTGCTCCTATAATGCAACCTTACGTAAATTACAGTTTTGTGTCTTTTGTGCTTGGATCTTaGTGGAAGGTTGAGATATTA | + |
|
Preference number: 2 (lower is better) Translates to: NATSAPIMQPYVNYSFVSFVLGS*WKVEIL Trigger: TAATATCTCAACCTTCCATCAAGATCCAAGCACAAA...AGACACAAAACTGTAATTTACGTAAGGTTGCATTATAGGAGCAGAGGTAGCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CCA 72 bp | CGTGGAGGCTGCAAAGTGAGTGGGGGCGGGTGGCTTTaGTCTAGACAAGTGGGAGAGCGCCTTTGTAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: RGGCKVSGGGWL*SRQVGERLCNS Trigger: TGAATTACAAAGGCGCTCTCCCACTTGTCTAGACCAAAGCCACCCGCCCCCACTCACTTTGCAGCCTCCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR GCA 72 bp | GGCGATGGCTTCCTGATCATGCTCAGGTCAGAACTTTaGCAGTGTACACTTGGAACGCCCTTGGCGTACGTC | + |
|
Preference number: 3 (lower is better) Translates to: GDGFLIMLRSEL*QCTLGTPLAYV Trigger: GACGTACGCCAAGGGCGTTCCAAGTGTACACTGGCAAAGTTCTGACCTGAGCATGATCAGGAAGCCATCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CCA 72 bp | AGAGAAAGAACGTTGAAGGTGAGAATGAGTGACTCGTaGAGGCTGCAAAGTGAGTGGGGGCGGGTGGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RERTLKVRMSDS*RLQSEWGRVAL Trigger: CAAAGCCACCCGCCCCCACTCACTTTGCAGCCTCCACGAGTCACTCATTCTCACCTTCAACGTTCTTTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CCA 72 bp | GATCATGCTCAGGTCAGAACTTTGCCAGTGTACACTTaGAACGCCCTTGGCGTACGTCAGTCATCGAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: DHAQVRTLPVYT*NALGVRQSSRL Trigger: CAGTCTCGATGACTGACGTACGCCAAGGGCGTTCCAAGTGTACACTGGCAAAGTTCTGACCTGAGCATGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CCA 72 bp | AGCGTAGCCTCACAACCTCCTTCCAGCATGCTCATTTaGGTAATCAGAACCAAGCGAACAGCTTTCTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SVASQPPSSMLI*VIRTKRTAFSC Trigger: GCAGGAGAAAGCTGTTCGCTTGGTTCTGATTACCCAAATGAGCATGCTGGAAGGAGGTTGTGAGGCTACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR TCA 72 bp | CTTGGAACGCCCTTGGCGTACGTCAGTCATCGAGACTaGGTTTCGTTCTCTTCCCTCTTTGTGTTTACACAC | + |
|
Preference number: 3 (lower is better) Translates to: LGTPLAYVSHRD*VSFSSLFVFTH Trigger: GTGTGTAAACACAAAGAGGGAAGAGAACGAAACTCAGTCTCGATGACTGACGTACGCCAAGGGCGTTCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAAATCTCTGGGGGACAAAGAGAAAGCCATGCTTGCTCAGGTAGGAAGCATCAAAGGAGGAACATGTaGGAGACATGCAGATGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: WQISGGQRESHACSGRKHQRRNM*ETCRWY Trigger: ATACCATCTGCATGTCTCCAACATGTTCCTCCTTTG...ATGCTTCCTACCTGAGCAAGCATGGCTTTCTCTTTGTCCCCCAGAGATTTGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCGCCACACAGAGAGTCTTCGACACTGCTTTCAGATTCCATGTGGTTAATCTCCTCTAAAGAGAGCTaGAGTAACAGCCAGAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CSPHRESSTLLSDSMWLISSKES*SNSQKS Trigger: AGACTTCTGGCTGTTACTCAAGCTCTCTTTAGAGGA...GATTAACCACATGGAATCTGAAAGCAGTGTCGAAGACTCTCTGTGTGGCGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR GCA 72 bp | TGGCAAATCTCTGGGGGACAAAGAGAAAGCCATGCTTaGTCAGGTAGGAAGCATCTTGATGTGAATAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: WQISGGQRESHA*SGRKHLDVNKP Trigger: TGGCTTATTCACATCAAGATGCTTCCTACCTGAGCAAGCATGGCTTTCTCTTTGTCCCCCAGAGATTTGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR TCA 72 bp | AAAGCCATGCTTGCTCAGGTAGGAAGCATCTTGATGTaGATAAGCCACCCACTTCTGTTAGATGTGGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: KAMLAQVGSILM*ISHPLLLDVDS Trigger: GGAATCCACATCTAACAGAAGTGGGTGGCTTATTCACATCAAGATGCTTCCTACCTGAGCAAGCATGGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CCA 72 bp | TTCATGCTTTCTCTGTGCCTTCTTCTATTGGCTTTTTaGAGATGCTGTGACACATCCACTCCACCTCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: FMLSLCLLLLAF*RCCDTSTPPPE Trigger: TTCAGGAGGTGGAGTGGATGTGTCACAGCATCTCCAAAAAGCCAATAGAAGAAGGCACAGAGAAAGCATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTGACCACAGCACACAGGAAATCTCAGGGCGTCTTCTGACTACTGTCTATGTTTCCAAGTCTGATGTTTaGGTCTCTATTCTCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SDHSTQEISGRLLTTVYVSKSDV*VSILRE Trigger: TTCTCTGAGAATAGAGACCAAAACATCAGACTTGGA...AACATAGACAGTAGTCAGAAGACGCCCTGAGATTTCCTGTGTGCTGTGGTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR GCA 72 bp | TGGTCTAGACAAGTGGGAGAGCGCCTTTGTAATTCATaGTTTCTCTGTGCCTTCTTCTATTGGCTTTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: WSRQVGERLCNS*FLCAFFYWLFG Trigger: TCCAAAAAGCCAATAGAAGAAGGCACAGAGAAAGCATGAATTACAAAGGCGCTCTCCCACTTGTCTAGACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR GCA 72 bp | TTGGGAACTGTGAACCATCAGTCACAGTACTTTTTGTaGCATGGCAGTGATTTGCTGGAAGTGTCACACTAT | + |
|
Preference number: 3 (lower is better) Translates to: LGTVNHQSQYFL*HGSDLLEVSHY Trigger: ATAGTGTGACACTTCCAGCAAATCACTGCCATGGCACAAAAAGTACTGTGACTGATGGTTCACAGTTCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CCA 72 bp | GAAAATCAAAGGAGGAACATGTTGGAGACATGCAGATaGTATACAACGCATCCAGTTCACAGCACCAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: ENQRRNMLETCR*YTTHPVHSTKQ Trigger: TTGCTTGGTGCTGTGAACTGGATGCGTTGTATACCATCTGCATGTCTCCAACATGTTCCTCCTTTGATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGCCACCCACTTCTGTTAGATGTGGATTCCTCTAAAGAGAGCTTGAGTAACCTGTGCCTTCTTCTATaGGCTTTTTGGAGATGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ISHPLLLDVDSSKESLSNLCLLL*AFWRCC Trigger: ACAGCATCTCCAAAAAGCCAATAGAAGAAGGCACAG...GTTACTCAAGCTCTCTTTAGAGGAATCCACATCTAACAGAAGTGGGTGGCTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCATCGAGACTGAGTTTCGTTCTCTTCCCTCTTTGTGTTTACACACTGGGGCTATGCTCTTACTTTTaGGGAAAATCGATGGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: QSSRLSFVLFPLCVYTLGLCSYF*GKSMDE Trigger: TTCATCCATCGATTTTCCCAAAAAGTAAGAGCATAG...CCCCAGTGTGTAAACACAAAGAGGGAAGAGAACGAAACTCAGTCTCGATGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR TCA 72 bp | ATCCGCCCTTCAGAACCACACATAAACAGGAAATACTaGACACACCTGGATTTGGGGGTTAAGTATAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: IRPSEPHINRKY*THLDLGVKYRE Trigger: TTCTCTATACTTAACCCCCAAATCCAGGTGTGTTCAGTATTTCCTGTTTATGTGTGGTTCTGAAGGGCGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR TCA 72 bp | GTTTACACACTGGGGAAATGGCTTGATAGTCAGACATaGGAGTTTGAATGCTACCTCTGCTCCTATAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: VYTLGKWLDSQT*EFECYLCSYNA Trigger: TGCATTATAGGAGCAGAGGTAGCATTCAAACTCTCATGTCTGACTATCAAGCCATTTCCCCAGTGTGTAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CCA 72 bp | CTTTGTAATTCATGCTTTCTCTGTGCCTTCTTCTATTaGCTTTTTGGAGATGCTGTGACACATCCACTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LCNSCFLCAFFY*LFGDAVTHPLH Trigger: GTGGAGTGGATGTGTCACAGCATCTCCAAAAAGCCAATAGAAGAAGGCACAGAGAAAGCATGAATTACAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGCTGTTCCCTTTCTTTTACTCAGAATCCACTTAATGTGCCTAAGAATTGGCTCAGAGAAAGAACGTaGAAGGTGAGAATGAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SCCSLSFTQNPLNVPKNWLRERT*KVRMSD Trigger: GTCACTCATTCTCACCTTCAACGTTCTTTCTCTGAG...CCAATTCTTAGGCACATTAAGTGGATTCTGAGTAAAAGAAAGGGAACAGCAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGGAAGTGTCACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGGGGTCTTTGGCACAATaGCACAGTTTCATTACCACT | + |
|
Preference number: 3 (lower is better) Translates to: CWKCHTIIKGPNHQHHHQGSLAQ*HSFITT Trigger: AGTGGTAATGAAACTGTGCAATTGTGCCAAAGACCC...CTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTGACACTTCCAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR-3UTR CAA 90 bp | AATGCTACCTCTGCTCCTATAATGCAACCTTACGTAAATTACAGTTTTGTGTCTCAGTGGGAGAGAGAATaGCAGAATCCCAAAGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NATSAPIMQPYVNYSFVSQWERE*QNPKAG Trigger: TCCTGCTTTGGGATTCTGCAATTCTCTCTCCCACTG...AGACACAAAACTGTAATTTACGTAAGGTTGCATTATAGGAGCAGAGGTAGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR TCA 72 bp | GGAATGGCTATCATGGATAGGAACAAGGAAGCATTCTaGGAGACCCTGGCTCAAATCAAATTCTATGATGAT | + |
|
Preference number: 3 (lower is better) Translates to: GMAIMDRNKEAF*ETLAQIKFYDD Trigger: ATCATCATAGAATTTGATTTGAGCCAGGGTCTCTCAGAATGCTTCCTTGTTCCTATCCATGATAGCCATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR TCA 72 bp | AGCAATGGATGTTTGAACTACTTTATGTCATTGAGTTaGTCCTGTCAGTGGGAGAGAGAATTGCAGAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SNGCLNYFMSLS*SCQWERELQNP Trigger: GGGATTCTGCAATTCTCTCTCCCACTGACAGGATCAACTCAATGACATAAAGTAGTTCAAACATCCATTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CCA 72 bp | TGTCTACAGAGTCCTCCTCTTTTGCATGGAGCACTGTaGATGATGAACTTGGATATGTATTTTCCTTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CLQSPPLLHGAL*MMNLDMYFPSD Trigger: ATCTGAAGGAAAATACATATCCAAGTTCATCATCCACAGTGCTCCATGCAAAAGAGGAGGACTCTGTAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR TCA 72 bp | GATTCCATGTGGTTAATCTACAAGTCTACAAGGAGTTaGTGGTTACTTTTGTGCTTGGATCTTGATGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DSMWLIYKSTRS*WLLLCLDLDGR Trigger: CCTTCCATCAAGATCCAAGCACAAAAGTAACCATCAACTCCTTGTAGACTTGTAGATTAACCACATGGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR GCA 72 bp | ATTTGGGTAATCAGAACCAAGCGAACAGCTTTCTCCTaGTGTTCCCTTTCTTTTACTCAGAATCCACTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: IWVIRTKRTAFS*CSLSFTQNPLN Trigger: ATTAAGTGGATTCTGAGTAAAAGAAAGGGAACAGCAGGAGAAAGCTGTTCGCTTGGTTCTGATTACCCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR GCA 72 bp | ATCAGTCACAGTACTTTTTGTGCCATGGCAGTGATTTaGTGGAAGTGTCACACTATAATCAAAGGACCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: ISHSTFCAMAVI*WKCHTIIKGPN Trigger: ATTTGGTCCTTTGATTATAGTGTGACACTTCCAGCAAATCACTGCCATGGCACAAAAAGTACTGTGACTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CCA 72 bp | TGGCATGTAGGCCTCATCTCCTATGCTCTTACTTTTTaGGAAAATCGATGGATGAACAGAATATACAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: WHVGLISYALTF*ENRWMNRIYRH Trigger: ATGTCTGTATATTCTGTTCATCCATCGATTTTCCCAAAAAGTAAGAGCATAGGAGATGAGGCCTACATGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CCA 72 bp | AGTCACAGTACTTTTTGTGCCATGGCAGTGATTTGCTaGAAGTGTCACACTATAATCAAAGGACCAAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: SHSTFCAMAVIC*KCHTIIKGPNH Trigger: ATGATTTGGTCCTTTGATTATAGTGTGACACTTCCAGCAAATCACTGCCATGGCACAAAAAGTACTGTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGGAAGTGTCACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGAAATTTATAGTTTTCTaGGCATGTAGGCCTCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: CWKCHTIIKGPNHQHHHQKFIVF*ACRPHL Trigger: GAGATGAGGCCTACATGCCAAGAAAACTATAAATTT...CTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTGACACTTCCAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR-3UTR CAA 90 bp | CTACATTATGTATCTGGCAAACTTAACTCATTAACTTCCCAAGGTGAAAAGATCTGGTTACTTTTGTGCTaGGATCTTGATGGAAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LHYVSGKLNSLTSQGEKIWLLLC*DLDGRL Trigger: CAACCTTCCATCAAGATCCAAGCACAAAAGTAACCA...GATCTTTTCACCTTGGGAAGTTAATGAGTTAAGTTTGCCAGATACATAATGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR TCA 72 bp | TACAAGGAGTTGATGGTTACTTTTGTGCTTGGATCTTaGTGGAAGGTTGAGATATTATTATCCACCATTACG | + |
|
Preference number: 3 (lower is better) Translates to: YKELMVTFVLGS*WKVEILLSTIT Trigger: CGTAATGGTGGATAATAATATCTCAACCTTCCATCAAGATCCAAGCACAAAAGTAACCATCAACTCCTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR TCA 72 bp | GATGGTTACTTTTGTGCTTGGATCTTGATGGAAGGTTaGGATATTATTATCCACCATTACGAAACAAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: DGYFCAWILMEG*DIIIHHYETKR Trigger: TCTTTTTGTTTCGTAATGGTGGATAATAATATCTCAACCTTCCATCAAGATCCAAGCACAAAAGTAACCATC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR GCA 72 bp | CAGCACAAGCATGAAACAAGAAATAAATTGATGATATaGATATGTGGGGAAGTCTGTGCTTTTCTAGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: QHKHETRNKLMI*ICGEVCAFLEI Trigger: AATTTCTAGAAAAGCACAGACTTCCCCACATATGCATATCATCAATTTATTTCTTGTTTCATGCTTGTGCTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CCA 72 bp | CTCATCTCCTATGCTCTTACTTTTTGGGAAAATCGATaGATGAACAGAATATACAGACATAAGCATTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: LISYALTFWENR*MNRIYRHKHLM Trigger: CATTAAATGCTTATGTCTGTATATTCTGTTCATCCATCGATTTTCCCAAAAAGTAAGAGCATAGGAGATGAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | AGCCTCACAACCTCCTTCCAGCATGCTCATTTGGGTAATCAGAACCAAGCGAACTTCCACAGCGACACTTaGAATCATCAAGCCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLTTSFQHAHLGNQNQANFHSDT*NHQACG Trigger: TCCACAGGCTTGATGATTGCAAGTGTCGCTGTGGAA...GTTCGCTTGGTTCTGATTACCCAAATGAGCATGCTGGAAGGAGGTTGTGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CCA 90 bp | AGCCTCACAACCTCCTTCCAGCATGCTCATTTGGGTAATCAGAACCAAGCGAACGTAGTGGTGACTGAGTaGGGTGTCTTCGATAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLTTSFQHAHLGNQNQANVVVTE*GVFDSL Trigger: AAGACTATCGAAGACACCCCACTCAGTCACCACTAC...GTTCGCTTGGTTCTGATTACCCAAATGAGCATGCTGGAAGGAGGTTGTGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | CAGTCATCGAGACTGAGTTTCGTTCTCTTCCCTCTTTGTGTTTACACACTGGGGTCATATTCTTCTGCTTaGCGGTTCCATGGGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSSRLSFVLFPLCVYTLGSYSSA*RFHGHL Trigger: GAGATGCCCATGGAACCGGCAAGCAGAAGAATATGA...CCCCAGTGTGTAAACACAAAGAGGGAAGAGAACGAAACTCAGTCTCGATGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CCA 90 bp | TGCTGGAAGTGTCACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGCAGCTGAGGTACCACTaGTGTCCTCTCTGCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CWKCHTIIKGPNHQHHHQQLRYH*CPLCFP Trigger: AGGGAAGCAGAGAGGACACCAGTGGTACCTCAGCTG...CTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTGACACTTCCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CCA 90 bp | TCAGACATTCTCTTCAGAAAGGGTCTTTGGCACAATTGCACAGTTTCATTACCAAGCGCTCCCTGTGATTaGGGGGAGGTTACACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDILFRKGLWHNCTVSLPSAPCD*GEVTPE Trigger: TTCAGGTGTAACCTCCCCCCAATCACAGGGAGCGCT...TGGTAATGAAACTGTGCAATTGTGCCAAAGACCCTTTCTGAAGAGAATGTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CAA 72 bp | GCTTTGGGAACTGTGAACCATCAGTCACAGTACTTTTaGTGCCATGGCAGTGATTTGCTGGAAGTGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ALGTVNHQSQYF*CHGSDLLEVSH Trigger: GTGTGACACTTCCAGCAAATCACTGCCATGGCACAAAAAGTACTGTGACTGATGGTTCACAGTTCCCAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CCA 90 bp | AGCCTCACAACCTCCTTCCAGCATGCTCATTTGGGTAATCAGAACCAAGCGAACGACACTGGAAACATGTaGAAAATGTTCTCTCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLTTSFQHAHLGNQNQANDTGNM*KMFSRM Trigger: CATTCGAGAGAACATTTTCCACATGTTTCCAGTGTC...GTTCGCTTGGTTCTGATTACCCAAATGAGCATGCTGGAAGGAGGTTGTGAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CCA 90 bp | TGGCAAATCTCTGGGGGACAAAGAGAAAGCCATGCTTGCTCAGGTAGGAAGCATAAAAGGCTGCGACACTaGAAACATGTGGAAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: WQISGGQRESHACSGRKHKRLRH*KHVENV Trigger: AACATTTTCCACATGTTTCCAGTGTCGCAGCCTTTT...ATGCTTCCTACCTGAGCAAGCATGGCTTTCTCTTTGTCCCCCAGAGATTTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CCA 90 bp | TGGCAAATCTCTGGGGGACAAAGAGAAAGCCATGCTTGCTCAGGTAGGAAGCATTATTCTTTAGGCATCTaGTGGAAACCATGCTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WQISGGQRESHACSGRKHYSLGI*WKPCLG Trigger: ACCTAAGCATGGTTTCCACCAGATGCCTAAAGAATA...ATGCTTCCTACCTGAGCAAGCATGGCTTTCTCTTTGTCCCCCAGAGATTTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | AATGCTACCTCTGCTCCTATAATGCAACCTTACGTAAATTACAGTTTTGTGTCTCACTGGTGTCCTCTCTaGTTCCCTCCATCAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NATSAPIMQPYVNYSFVSHWCPL*FPPSTA Trigger: GGCTGTTGATGGAGGGAAGCAGAGAGGACACCAGTG...AGACACAAAACTGTAATTTACGTAAGGTTGCATTATAGGAGCAGAGGTAGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | AAATCACAACTACAGACCCATCTGGGAAGGAAAATCAAAGGAGGAACATGTTGGTGGGGATGTGTTTCTTaGTTTCCACCTCGTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSQLQTHLGRKIKGGTCWWGCVS*FPPRSS Trigger: TGAGCTACGAGGTGGAAAGCAAGAAACACATCCCCA...CCAACATGTTCCTCCTTTGATTTTCCTTCCCAGATGGGTCTGTAGTTGTGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | AATGCTACCTCTGCTCCTATAATGCAACCTTACGTAAATTACAGTTTTGTGTCTGGCCCGATAGGAAAATaGTGGCAGGAGGAGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: NATSAPIMQPYVNYSFVSGPIGK*WQEEEC Trigger: GCATTCCTCCTCCTGCCAGCATTTTCCTATCGGGCC...AGACACAAAACTGTAATTTACGTAAGGTTGCATTATAGGAGCAGAGGTAGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CCA 90 bp | ATAAGCCACCCACTTCTGTTAGATGTGGATTCCTCTAAAGAGAGCTTGAGTAACCAATCATCAAGCCTGTaGACAAGCGGTATGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISHPLLLDVDSSKESLSNQSSSL*TSGMQS Trigger: TGACTGCATACCGCTTGTCCACAGGCTTGATGATTG...GTTACTCAAGCTCTCTTTAGAGGAATCCACATCTAACAGAAGTGGGTGGCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CAA 72 bp | AAGCAGCTCTACTTTTGTCTACAGAGTCCTCCTCTTTaGCATGGAGCACTGTGGATGATGAACTTGGATATG | + |
|
Preference number: 4 (lower is better) Translates to: KQLYFCLQSPPL*HGALWMMNLDM Trigger: CATATCCAAGTTCATCATCCACAGTGCTCCATGCAAAAGAGGAGGACTCTGTAGACAAAAGTAGAGCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR TCA 90 bp | CACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGCATCAGCATCACCGCAGAGAGACTTGTTaGGAATTCCCCCATTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTIIKGPNHQHHHQHQHHRRETC*EFPHYQ Trigger: TTGGTAATGGGGGAATTCTCAACAAGTCTCTCTGCG...GTGATGCTGATGCTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | TCAGACATTCTCTTCAGAAAGGGTCTTTGGCACAATTGCACAGTTTCATTACCATCTCATCCAGATATGTaGTGTTCCTGGTGCGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SDILFRKGLWHNCTVSLPSHPDM*CSWCVV Trigger: TACCACGCACCAGGAACAGCACATATCTGGATGAGA...TGGTAATGAAACTGTGCAATTGTGCCAAAGACCCTTTCTGAAGAGAATGTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTGTTCCCTTTCTTTTACTCAGAATCCACTTAATGTGCCTAAGAATTGGAGGATTCCTCTCATATaGAGCTGGAGCATTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCCSLSFTQNPLNVPKNWRIPLI*SWSIWL Trigger: CAGCCAAATGCTCCAGCTCCATATGAGAGGAATCCT...CCAATTCTTAGGCACATTAAGTGGATTCTGAGTAAAAGAAAGGGAACAGCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | CACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGCATCAGCATCACCCCATTACCAACCACTaGACACTGGTTATAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: HTIIKGPNHQHHHQHQHHPITNH*TLVIGI Trigger: TATCCCTATAACCAGTGTGCAGTGGTTGGTAATGGG...GTGATGCTGATGCTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCTGTGCCTTCTTCTATTGGCTTTTTGGAGATGCTGTGACACATCCACTTCACATTTGCTGAATTaGAGTTTGAGGATTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLCLLLLAFWRCCDTSTSHLLN*SLRIPL Trigger: GAGAGGAATCCTCAAACTGCAATTCAGCAAATGTGA...AGTGGATGTGTCACAGCATCTCCAAAAAGCCAATAGAAGAAGGCACAGAGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CCA 90 bp | TGCTCGCCACACAGAGAGTCTTCGACACTGCTTTCAGATTCCATGTGGTTAATCTTCTCCTTCAAATTCTaGTACTTCAGGGTTATAATG | + |
|
Preference number: 4 (lower is better) Translates to: CSPHRESSTLLSDSMWLIFSFKF*YFRVIM Trigger: CATTATAACCCTGAAGTACCAGAATTTGAAGGAGAA...GATTAACCACATGGAATCTGAAAGCAGTGTCGAAGACTCTCTGTGTGGCGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTGTTCCCTTTCTTTTACTCAGAATCCACTTAATGTGCCTAAGAATTGGTGGAGCTGGAGCATTTaGCTGTATTCTTTAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SCCSLSFTQNPLNVPKNWWSWSI*LYSLGI Trigger: GATGCCTAAAGAATACAGCCAAATGCTCCAGCTCCA...CCAATTCTTAGGCACATTAAGTGGATTCTGAGTAAAAGAAAGGGAACAGCAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CCA 90 bp | CACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGCATCAGCATCACCCTCTCATATGGAGCTaGAGCATTTGGCTGTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTIIKGPNHQHHHQHQHHPLIWS*SIWLYS Trigger: AGAATACAGCCAAATGCTCCAGCTCCATATGAGAGG...GTGATGCTGATGCTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CAA 72 bp | CATCAGTCACAGTACTTTTTGTGCCATGGCAGTGATTaGCTGGAAGTGTCACACTATAATCAAAGGACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HQSQYFLCHGSD*LEVSHYNQRTK Trigger: TTTGGTCCTTTGATTATAGTGTGACACTTCCAGCAAATCACTGCCATGGCACAAAAAGTACTGTGACTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CAA 72 bp | CACCAAGCAACAGTTTTTACAAACAGCATGTCAGCTTaGGGAACTGTGAACCATCAGTCACAGTACTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HQATVFTNSMSA*GTVNHQSQYFL Trigger: CAAAAAGTACTGTGACTGATGGTTCACAGTTCCCAAAGCTGACATGCTGTTTGTAAAAACTGTTGCTTGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | AATGCTACCTCTGCTCCTATAATGCAACCTTACGTAAATTACAGTTTTGTGTCTTGTGGACAAGCGGTATaGAGTCACCCCTTTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NATSAPIMQPYVNYSFVSCGQAV*SHPFSS Trigger: AGAACTAAAGGGGTGACTGCATACCGCTTGTCCACA...AGACACAAAACTGTAATTTACGTAAGGTTGCATTATAGGAGCAGAGGTAGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CCA 90 bp | CTACATTATGTATCTGGCAAACTTAACTCATTAACTTCCCAAGGTGAAAAGATCCCGATAGGAAAATGCTaGCAGGAGGAGGAATGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LHYVSGKLNSLTSQGEKIPIGKC*QEEECI Trigger: GATGCATTCCTCCTCCTGCCAGCATTTTCCTATCGG...GATCTTTTCACCTTGGGAAGTTAATGAGTTAAGTTTGCCAGATACATAATGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | ATAAGCCACCCACTTCTGTTAGATGTGGATTCCTCTAAAGAGAGCTTGAGTAACGTCCTCCAAAAACTGTaGTTTCTTCTCCTTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: ISHPLLLDVDSSKESLSNVLQKL*FLLLQI Trigger: AATTTGAAGGAGAAGAAAGCACAGTTTTTGGAGGAC...GTTACTCAAGCTCTCTTTAGAGGAATCCACATCTAACAGAAGTGGGTGGCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CAA 72 bp | AAGCAATGGATGTTTGAACTACTTTATGTCATTGAGTaGATCCTGTCAGTGGGAGAGAGAATTGCAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: KQWMFELLYVIE*ILSVGERIAES Trigger: GGATTCTGCAATTCTCTCTCCCACTGACAGGATCAACTCAATGACATAAAGTAGTTCAAACATCCATTGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CAA 72 bp | TTGGCATGTAGGCCTCATCTCCTATGCTCTTACTTTTaGGGAAAATCGATGGATGAACAGAATATACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LACRPHLLCSYF*GKSMDEQNIQT Trigger: TGTCTGTATATTCTGTTCATCCATCGATTTTCCCAAAAAGTAAGAGCATAGGAGATGAGGCCTACATGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CAA 72 bp | CCTCCTCTTTTGCATGGAGCACTGTGGATGATGAACTaGGATATGTATTTTCCTTCAGATTTGGAAAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPLLHGALWMMN*DMYFPSDLERN Trigger: GTTTCTTTCCAAATCTGAAGGAAAATACATATCCAAGTTCATCATCCACAGTGCTCCATGCAAAAGAGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | CTACATTATGTATCTGGCAAACTTAACTCATTAACTTCCCAAGGTGAAAAGATCATTGTCATATTCTTCTaGTTGCCGGTTCCATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHYVSGKLNSLTSQGEKIIVIFF*LPVPWA Trigger: TGCCCATGGAACCGGCAAGCAGAAGAATATGACAAT...GATCTTTTCACCTTGGGAAGTTAATGAGTTAAGTTTGCCAGATACATAATGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | ATAAGCCACCCACTTCTGTTAGATGTGGATTCCTCTAAAGAGAGCTTGAGTAACACAGGAAGCCAGTTTTaGTCTAAAATTGTCATATTC | + |
|
Preference number: 4 (lower is better) Translates to: ISHPLLLDVDSSKESLSNTGSQF*SKIVIF Trigger: GAATATGACAATTTTAGAGCAAAACTGGCTTCCTGT...GTTACTCAAGCTCTCTTTAGAGGAATCCACATCTAACAGAAGTGGGTGGCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | TCCTGCTGTTCCCTTTCTTTTACTCAGAATCCACTTAATGTGCCTAAGAATTGGAGATTTATCAATTTCTaGTCCGCAGAGAGACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SCCSLSFTQNPLNVPKNWRFINF*SAERLV Trigger: AACAAGTCTCTCTGCGGAGCAGAAATTGATAAATCT...CCAATTCTTAGGCACATTAAGTGGATTCTGAGTAAAAGAAAGGGAACAGCAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CCA 90 bp | AATGCTACCTCTGCTCCTATAATGCAACCTTACGTAAATTACAGTTTTGTGTCTATGCATCTCCATAGGTaGAGATGTCCTCCAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: NATSAPIMQPYVNYSFVSMHLHR*RCPPKT Trigger: AGTTTTTGGAGGACATCTCCACCTATGGAGATGCAT...AGACACAAAACTGTAATTTACGTAAGGTTGCATTATAGGAGCAGAGGTAGCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CAA 72 bp | CAGGTTTGGCAGCACAAGCATGAAACAAGAAATAAATaGATGATATGCATATGTGGGGAAGTCTGTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVWQHKHETRNK*MICICGEVCAF Trigger: AAAAGCACAGACTTCCCCACATATGCATATCATCAATTTATTTCTTGTTTCATGCTTGTGCTGCCAAACCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CAA 72 bp | AGAAAGTTCTCAGGGAACAACGGTCTTGGGTATCTGTaGAAAGTCCACACATTTACTAGGTTTAAATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RKFSGNNGLGYL*KVHTFTRFKCT Trigger: TGTACATTTAAACCTAGTAAATGTGTGGACTTTCAACAGATACCCAAGACCGTTGTTCCCTGAGAACTTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR GCA 90 bp | TTTATCACTAAGCCCATCCCATTTCCCTCTTCTAAGTGGATACTCTTCGTGAATAAGAAGAGAACCTTTTaGCTCATTTTTGACTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FITKPIPFPSSKWILFVNKKRTF*LIFDSL Trigger: CAAAGAGTCAAAAATGAGGCAAAAGGTTCTCTTCTT...ATTCACGAAGAGTATCCACTTAGAAGAGGGAAATGGGATGGGCTTAGTGATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| 3UTR CAA 72 bp | CCACTTCTGTTAGATGTGGATTCCTCTAAAGAGAGCTaGAGTAACAGCCAGAAGTCTCAAATTATGTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLLDVDSSKES*SNSQKSQIMLN Trigger: ATTTAACATAATTTGAGACTTCTGGCTGTTACTCAAGCTCTCTTTAGAGGAATCCACATCTAACAGAAGTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR TCA 90 bp | CTACATTATGTATCTGGCAAACTTAACTCATTAACTTCCCAAGGTGAAAAGATCCTTTTGCCTCATTTTTaGCTCTTTGAGTGTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LHYVSGKLNSLTSQGEKILLPHF*LFECLV Trigger: TACCAAACACTCAAAGAGTCAAAAATGAGGCAAAAG...GATCTTTTCACCTTGGGAAGTTAATGAGTTAAGTTTGCCAGATACATAATGTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS CCA 90 bp | CTGAGGTACCACTGGTGTCCTCTCTGCTTCCCTCCATCAACAGCCTaGAGCGGGCAGGCGCGTCGGCTGGGCACCAGAGCATACGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRYHWCPLCFPPSTA*SGQARRLGTRAYAG Trigger: TCCTGCGTATGCTCTGGTGCCCAGCCGACGCGCCTGCCCGCTCCAGGCTGTTGATGGAGGGAAGCAGAGAGGACACCAGTGGTACCTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS CCA 90 bp | GGGTTGTCGGGCTCCAGAGTGTCTTCAGTGCAGCTGAGGTACCACTaGTGTCCTCTCTGCTTCCCTCCATCAACAGCCTGGAGCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLSGSRVSSVQLRYH*CPLCFPPSTAWSGQ Trigger: CTGCCCGCTCCAGGCTGTTGATGGAGGGAAGCAGAGAGGACACCAGTGGTACCTCAGCTGCACTGAAGACACTCTGGAGCCCGACAACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS GCA 90 bp | CTGTTATTTGGGTTGTCTTCTCATCCAGATATGTGCTGTTCCTGGTaGGTGGTACCGGGGTTGTCGGGCTCCAGAGTGTCTTCAGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLFGLSSHPDMCCSW*VVPGLSGSRVSSVQ Trigger: CTGCACTGAAGACACTCTGGAGCCCGACAACCCCGGTACCACGCACCAGGAACAGCACATATCTGGATGAGAAGACAACCCAAATAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS CCA 90 bp | TCTCTGTTATTTGGGTTGTCTTCTCATCCAGATATGTGCTGTTCCTaGTGCGTGGTACCGGGGTTGTCGGGCTCCAGAGTGTCTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLFGLSSHPDMCCS*CVVPGLSGSRVSSV Trigger: CACTGAAGACACTCTGGAGCCCGACAACCCCGGTACCACGCACCAGGAACAGCACATATCTGGATGAGAAGACAACCCAAATAACAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS GCA 90 bp | TTCCACAGCGACACTTGCAATCATCAAGCCTGTGGACAAGCGGTATaGAGTCACCCCTTTAGTTCTCCAGAAAAGAGCGAGGTGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FHSDTCNHQACGQAV*SHPFSSPEKSEVSQ Trigger: CTGAGACACCTCGCTCTTTTCTGGAGAACTAAAGGGGTGACTGCATACCGCTTGTCCACAGGCTTGATGATTGCAAGTGTCGCTGTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS GCA 90 bp | GAATCCGTAGAGCTTCACGTTTTCACACAGTTCCACAGCGACACTTaGAATCATCAAGCCTGTGGACAAGCGGTATGCAGTCACCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ESVELHVFTQFHSDT*NHQACGQAVCSHPF Trigger: AAAGGGGTGACTGCATACCGCTTGTCCACAGGCTTGATGATTGCAAGTGTCGCTGTGGAACTGTGTGAAAACGTGAAGCTCTACGGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CAA 90 bp | TTTATCACTAAGCCCATCCCATTTCCCTCTTCTAAGTGGATACTCTTCGTGAATTGCGTGGTACCGGGGTaGTCGGGCTCCAGAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FITKPIPFPSSKWILFVNCVVPG*SGSRVS Trigger: AGACACTCTGGAGCCCGACAACCCCGGTACCACGCA...ATTCACGAAGAGTATCCACTTAGAAGAGGGAAATGGGATGGGCTTAGTGATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CAA 90 bp | TGGCAAATCTCTGGGGGACAAAGAGAAAGCCATGCTTGCTCAGGTAGGAAGCATGGAAACCACGAAGTCTaGAATGGCATCGCAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WQISGGQRESHACSGRKHGNHEV*NGIATG Trigger: TCCTGTTGCGATGCCATTCAAGACTTCGTGGTTTCC...ATGCTTCCTACCTGAGCAAGCATGGCTTTCTCTTTGTCCCCCAGAGATTTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CAA 90 bp | TGGCAAATCTCTGGGGGACAAAGAGAAAGCCATGCTTGCTCAGGTAGGAAGCATCCGCAGAGAGACTTGTaGAGAATTCCCCCATTACCA | + |
|
Preference number: 5 (lower is better) Translates to: WQISGGQRESHACSGRKHPQRDL*RIPPLP Trigger: TGGTAATGGGGGAATTCTCAACAAGTCTCTCTGCGG...ATGCTTCCTACCTGAGCAAGCATGGCTTTCTCTTTGTCCCCCAGAGATTTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CAA 90 bp | CAGTCATCGAGACTGAGTTTCGTTCTCTTCCCTCTTTGTGTTTACACACTGGGGGTTCCACAGCGACACTaGCAATCATCAAGCCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QSSRLSFVLFPLCVYTLGVPQRH*QSSSLW Trigger: CCACAGGCTTGATGATTGCAAGTGTCGCTGTGGAAC...CCCCAGTGTGTAAACACAAAGAGGGAAGAGAACGAAACTCAGTCTCGATGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS GCA 90 bp | TTGGTAGACTTTAAAAGAGATGCCTGTGTTGGCCCGATAGGAAAATaGTGGCAGGAGGAGGAATGCATCTCCATAGGTGGAGATGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVDFKRDACVGPIGK*WQEEECISIGGDVL Trigger: GAGGACATCTCCACCTATGGAGATGCATTCCTCCTCCTGCCAGCATTTTCCTATCGGGCCAACACAGGCATCTCTTTTAAAGTCTACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS CCA 90 bp | GATGTGTTTCTTGCTTTCCACCTCGTAGCTCATGTTAGTCCCCACTaGAGTGTTGTTCTGGGAAACCACGAAGTCTTGAATGGCATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: DVFLAFHLVAHVSPH*SVVLGNHEVLNGIA Trigger: TGCGATGCCATTCAAGACTTCGTGGTTTCCCAGAACAACACTCCAGTGGGGACTAACATGAGCTACGAGGTGGAAAGCAAGAAACACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS TCA 90 bp | CATATTCTTCTGCTTGCCGGTTCCATGGGCATCTCTGTATGTTTGTaGTGGTCTGGAGGTAGTCATCCTCAGAGTACCGTCTCGTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HILLLAGSMGISVCL*WSGGSHPQSTVSFC Trigger: ACAAAACGAGACGGTACTCTGAGGATGACTACCTCCAGACCATCACAAACATACAGAGATGCCCATGGAACCGGCAAGCAGAAGAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS GCA 90 bp | GGAAACCACGAAGTCTTGAATGGCATCGCAACAGGAAGCCAGTTTTaGTCTAAAATTGTCATATTCTTCTGCTTGCCGGTTCCATGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GNHEVLNGIATGSQF*SKIVIFFCLPVPWA Trigger: TGCCCATGGAACCGGCAAGCAGAAGAATATGACAATTTTAGAGCAAAACTGGCTTCCTGTTGCGATGCCATTCAAGACTTCGTGGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
||
| CDS-3UTR CAA 90 bp | TCCTGCTGTTCCCTTTCTTTTACTCAGAATCCACTTAATGTGCCTAAGAATTGGGTCCCCACTGGAGTGTaGTTCTGGGAAACCACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SCCSLSFTQNPLNVPKNWVPTGV*FWETTK Trigger: CTTCGTGGTTTCCCAGAACAACACTCCAGTGGGGAC...CCAATTCTTAGGCACATTAAGTGGATTCTGAGTAAAAGAAAGGGAACAGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS GCA 90 bp | CAACAGGAAGCCAGTTTTGCTCTAAAATTGTCATATTCTTCTGCTTaGCGGTTCCATGGGCATCTCTGTATGTTTGTGATGGTCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: QQEASFALKLSYSSA*RFHGHLCMFVMVWR Trigger: CCTCCAGACCATCACAAACATACAGAGATGCCCATGGAACCGGCAAGCAGAAGAATATGACAATTTTAGAGCAAAACTGGCTTCCTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS-3UTR CAA 90 bp | ATAAGCCACCCACTTCTGTTAGATGTGGATTCCTCTAAAGAGAGCTTGAGTAACGCTCCGCAGAGAGACTaGTTGAGAATTCCCCCATTA | + |
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Preference number: 5 (lower is better) Translates to: ISHPLLLDVDSSKESLSNAPQRD*LRIPPL Trigger: TAATGGGGGAATTCTCAACAAGTCTCTCTGCGGAGC...GTTACTCAAGCTCTCTTTAGAGGAATCCACATCTAACAGAAGTGGGTGGCTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS GCA 90 bp | ATCGCAACAGGAAGCCAGTTTTGCTCTAAAATTGTCATATTCTTCTaGTTGCCGGTTCCATGGGCATCTCTGTATGTTTGTGATGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: IATGSQFCSKIVIFF*LPVPWASLYVCDGL Trigger: CAGACCATCACAAACATACAGAGATGCCCATGGAACCGGCAAGCAGAAGAATATGACAATTTTAGAGCAAAACTGGCTTCCTGTTGCGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CCA 90 bp | CAGTTTTGCTCTAAAATTGTCATATTCTTCTGCTTGCCGGTTCCATaGGCATCTCTGTATGTTTGTGATGGTCTGGAGGTAGTCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: QFCSKIVIFFCLPVP*ASLYVCDGLEVVIL Trigger: GAGGATGACTACCTCCAGACCATCACAAACATACAGAGATGCCCATGGAACCGGCAAGCAGAAGAATATGACAATTTTAGAGCAAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CCA 90 bp | CTGAATTGCAGTTTGAGGATTCCTCTCATATGGAGCTGGAGCATTTaGCTGTATTCTTTAGGCATCTGGTGGAAACCATGCTTAGGTAAC | + |
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Preference number: 5 (lower is better) Translates to: LNCSLRIPLIWSWSI*LYSLGIWWKPCLGN Trigger: GTTACCTAAGCATGGTTTCCACCAGATGCCTAAAGAATACAGCCAAATGCTCCAGCTCCATATGAGAGGAATCCTCAAACTGCAATTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS-3UTR CAA 90 bp | TGCTGGAAGTGTCACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGGTCATATTCTTCTGCTaGCCGGTTCCATGGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: CWKCHTIIKGPNHQHHHQVIFFC*PVPWAS Trigger: AGATGCCCATGGAACCGGCAAGCAGAAGAATATGAC...CTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTGACACTTCCAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS GCA 90 bp | GAGGAGGAATGCATCTCCATAGGTGGAGATGTCCTCCAAAAACTGTaGTTTCTTCTCCTTCAAATTCTGGTACTTCAGGGTTATAATGCT | + |
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Preference number: 5 (lower is better) Translates to: EEECISIGGDVLQKL*FLLLQILVLQGYNA Trigger: AGCATTATAACCCTGAAGTACCAGAATTTGAAGGAGAAGAAAGCACAGTTTTTGGAGGACATCTCCACCTATGGAGATGCATTCCTCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS-3UTR CAA 90 bp | CACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGCATCAGCATCACATGGAGCTGGAGCATTaGGCTGTATTCTTTAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: HTIIKGPNHQHHHQHQHHMELEH*AVFFRH Trigger: ATGCCTAAAGAATACAGCCAAATGCTCCAGCTCCAT...GTGATGCTGATGCTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS-3UTR CAA 90 bp | CACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGCATCAGCATCACTCTCTGTTATTTGGGTaGTCTTCTCATCCAGATATG | + |
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Preference number: 5 (lower is better) Translates to: HTIIKGPNHQHHHQHQHHSLLFG*SSHPDM Trigger: CATATCTGGATGAGAAGACAACCCAAATAACAGAGA...GTGATGCTGATGCTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS-3UTR CAA 90 bp | TGCTGGAAGTGTCACACTATAATCAAAGGACCAAATCATCAGCATCATCATCAGGTTATAATGCTGGGATaGACAGTCACAAGATTTGTT | + |
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Preference number: 5 (lower is better) Translates to: CWKCHTIIKGPNHQHHHQVIMLG*TVTRFV Trigger: AACAAATCTTGTGACTGTCAATCCCAGCATTATAAC...CTGATGATGATGCTGATGATTTGGTCCTTTGATTATAGTGTGACACTTCCAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS-3UTR CAA 90 bp | AATGCTACCTCTGCTCCTATAATGCAACCTTACGTAAATTACAGTTTTGTGTCTAGAGTTCAAGCTATATaGCAGATCTTTGCATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: NATSAPIMQPYVNYSFVSRVQAI*QIFAFL Trigger: GAGAAATGCAAAGATCTGCAATATAGCTTGAACTCT...AGACACAAAACTGTAATTTACGTAAGGTTGCATTATAGGAGCAGAGGTAGCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS-3UTR CAA 90 bp | CTACATTATGTATCTGGCAAACTTAACTCATTAACTTCCCAAGGTGAAAAGATCTTCACATTTGCTGAATaGCAGTTTGAGGATTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LHYVSGKLNSLTSQGEKIFTFAE*QFEDSS Trigger: AGAGGAATCCTCAAACTGCAATTCAGCAAATGTGAA...GATCTTTTCACCTTGGGAAGTTAATGAGTTAAGTTTGCCAGATACATAATGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS TCA 72 bp | CGGGGTTGTCGGGCTCCAGAGTGTCTTCAGTGCAGCTaGGGTACCACTGGTGTCCTCTCTGCTTCCCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RGCRAPECLQCS*GTTGVLSASLH Trigger: ATGGAGGGAAGCAGAGAGGACACCAGTGGTACCTCAGCTGCACTGAAGACACTCTGGAGCCCGACAACCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CAA 72 bp | CCAGATATGTGCTGTTCCTGGTGCGTGGTACCGGGGTaGTCGGGCTCCAGAGTGTCTTCAGTGCAGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: PDMCCSWCVVPG*SGSRVSSVQLR Trigger: CCTCAGCTGCACTGAAGACACTCTGGAGCCCGACAACCCCGGTACCACGCACCAGGAACAGCACATATCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CCA 72 bp | GGCTCCAGAGTGTCTTCAGTGCAGCTGAGGTACCACTaGTGTCCTCTCTGCTTCCCTCCATCAACAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSRVSSVQLRYH*CPLCFPPSTAW Trigger: CCAGGCTGTTGATGGAGGGAAGCAGAGAGGACACCAGTGGTACCTCAGCTGCACTGAAGACACTCTGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CAA 90 bp | TCTTCTCATCCAGATATGTGCTGTTCCTGGTGCGTGGTACCGGGGTaGTCGGGCTCCAGAGTGTCTTCAGTGCAGCTGAGGTACCACTGG | + |
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Preference number: 6 (lower is better) Translates to: SSHPDMCCSWCVVPG*SGSRVSSVQLRYHW Trigger: CCAGTGGTACCTCAGCTGCACTGAAGACACTCTGGAGCCCGACAACCCCGGTACCACGCACCAGGAACAGCACATATCTGGATGAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS GCA 72 bp | GGGTTGTCTTCTCATCCAGATATGTGCTGTTCCTGGTaGGTGGTACCGGGGTTGTCGGGCTCCAGAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: GLSSHPDMCCSW*VVPGLSGSRVS Trigger: AGACACTCTGGAGCCCGACAACCCCGGTACCACGCACCAGGAACAGCACATATCTGGATGAGAAGACAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CCA 72 bp | TGTCTTCTCATCCAGATATGTGCTGTTCCTGGTGCGTaGTACCGGGGTTGTCGGGCTCCAGAGTGTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: CLLIQICAVPGA*YRGCRAPECLQ Trigger: CTGAAGACACTCTGGAGCCCGACAACCCCGGTACCACGCACCAGGAACAGCACATATCTGGATGAGAAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CCA 72 bp | TTTGGGTTGTCTTCTCATCCAGATATGTGCTGTTCCTaGTGCGTGGTACCGGGGTTGTCGGGCTCCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: FGLSSHPDMCCS*CVVPGLSGSRV Trigger: CACTCTGGAGCCCGACAACCCCGGTACCACGCACCAGGAACAGCACATATCTGGATGAGAAGACAACCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS GCA 72 bp | TCTCTGTTATTTGGGTTGTCTTCTCATCCAGATATGTaGTGTTCCTGGTGCGTGGTACCGGGGTTGTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: SLLFGLSSHPDM*CSWCVVPGLSG Trigger: GCCCGACAACCCCGGTACCACGCACCAGGAACAGCACATATCTGGATGAGAAGACAACCCAAATAACAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CAA 72 bp | CCCCACTGGAGTGTTGTTCTGGGAAACCACGAAGTCTaGAATGGCATCGCAACAGGAAGCCAGTTTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PHWSVVLGNHEV*NGIATGSQFCS Trigger: AGAGCAAAACTGGCTTCCTGTTGCGATGCCATTCAAGACTTCGTGGTTTCCCAGAACAACACTCCAGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CAA 90 bp | AGAATCCGTAGAGCTTCACGTTTTCACACAGTTCCACAGCGACACTaGCAATCATCAAGCCTGTGGACAAGCGGTATGCAGTCACCCCTT | + |
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Preference number: 6 (lower is better) Translates to: RIRRASRFHTVPQRH*QSSSLWTSGMQSPL Trigger: AAGGGGTGACTGCATACCGCTTGTCCACAGGCTTGATGATTGCAAGTGTCGCTGTGGAACTGTGTGAAAACGTGAAGCTCTACGGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS GCA 72 bp | GACACTTGCAATCATCAAGCCTGTGGACAAGCGGTATaGAGTCACCCCTTTAGTTCTCCAGAAAAGAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: DTCNHQACGQAV*SHPFSSPEKSE Trigger: CTCGCTCTTTTCTGGAGAACTAAAGGGGTGACTGCATACCGCTTGTCCACAGGCTTGATGATTGCAAGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS GCA 72 bp | GAGCTTCACGTTTTCACACAGTTCCACAGCGACACTTaGAATCATCAAGCCTGTGGACAAGCGGTATGCAGT | + |
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Preference number: 6 (lower is better) Translates to: ELHVFTQFHSDT*NHQACGQAVCS Trigger: ACTGCATACCGCTTGTCCACAGGCTTGATGATTGCAAGTGTCGCTGTGGAACTGTGTGAAAACGTGAAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CAA 72 bp | AGAGCTTCACGTTTTCACACAGTTCCACAGCGACACTaGCAATCATCAAGCCTGTGGACAAGCGGTATGCAG | + |
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Preference number: 6 (lower is better) Translates to: RASRFHTVPQRH*QSSSLWTSGMQ Trigger: CTGCATACCGCTTGTCCACAGGCTTGATGATTGCAAGTGTCGCTGTGGAACTGTGTGAAAACGTGAAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CCA 72 bp | GCGACACTGGAAACATGTGGAAAATGTTCTCTCGAATaGGGATGTGTTTCTTGCTTTCCACCTCGTAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: ATLETCGKCSLE*GCVSCFPPRSS Trigger: TGAGCTACGAGGTGGAAAGCAAGAAACACATCCCCATTCGAGAGAACATTTTCCACATGTTTCCAGTGTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CCA 72 bp | TTTGCTTCCAACATCTTTACTAGCGCTCCCTGTGATTaGGGGGAGGTTACACCTGAAGACGAAGTCAGATTT | + |
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Preference number: 6 (lower is better) Translates to: FASNIFTSAPCD*GEVTPEDEVRF Trigger: AAATCTGACTTCGTCTTCAGGTGTAACCTCCCCCCAATCACAGGGAGCGCTAGTAAAGATGTTGGAAGCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CAA 90 bp | GCAACAGGAAGCCAGTTTTGCTCTAAAATTGTCATATTCTTCTGCTaGCCGGTTCCATGGGCATCTCTGTATGTTTGTGATGGTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: ATGSQFCSKIVIFFC*PVPWASLYVCDGLE Trigger: CTCCAGACCATCACAAACATACAGAGATGCCCATGGAACCGGCAAGCAGAAGAATATGACAATTTTAGAGCAAAACTGGCTTCCTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CCA 72 bp | AGTTTGAGGATTCCTCTCATATGGAGCTGGAGCATTTaGCTGTATTCTTTAGGCATCTGGTGGAAACCATGC | + |
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Preference number: 6 (lower is better) Translates to: SLRIPLIWSWSI*LYSLGIWWKPC Trigger: GCATGGTTTCCACCAGATGCCTAAAGAATACAGCCAAATGCTCCAGCTCCATATGAGAGGAATCCTCAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CCA 72 bp | CTGAATTGCAGTTTGAGGATTCCTCTCATATGGAGCTaGAGCATTTGGCTGTATTCTTTAGGCATCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LNCSLRIPLIWS*SIWLYSLGIWW Trigger: CCACCAGATGCCTAAAGAATACAGCCAAATGCTCCAGCTCCATATGAGAGGAATCCTCAAACTGCAATTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CAA 72 bp | CAGTTTGAGGATTCCTCTCATATGGAGCTGGAGCATTaGGCTGTATTCTTTAGGCATCTGGTGGAAACCATG | + |
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Preference number: 6 (lower is better) Translates to: QFEDSSHMELEH*AVFFRHLVETM Trigger: CATGGTTTCCACCAGATGCCTAAAGAATACAGCCAAATGCTCCAGCTCCATATGAGAGGAATCCTCAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS GCA 72 bp | GCCAGTTTTGCTCTAAAATTGTCATATTCTTCTGCTTaGCGGTTCCATGGGCATCTCTGTATGTTTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: ASFALKLSYSSA*RFHGHLCMFVM Trigger: CATCACAAACATACAGAGATGCCCATGGAACCGGCAAGCAGAAGAATATGACAATTTTAGAGCAAAACTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS GCA 72 bp | GGAAGCCAGTTTTGCTCTAAAATTGTCATATTCTTCTaGTTGCCGGTTCCATGGGCATCTCTGTATGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: GSQFCSKIVIFF*LPVPWASLYVC Trigger: ACAAACATACAGAGATGCCCATGGAACCGGCAAGCAGAAGAATATGACAATTTTAGAGCAAAACTGGCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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| CDS CAA 72 bp | AGCCAGTTTTGCTCTAAAATTGTCATATTCTTCTGCTaGCCGGTTCCATGGGCATCTCTGTATGTTTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: SQFCSKIVIFFC*PVPWASLYVCD Trigger: ATCACAAACATACAGAGATGCCCATGGAACCGGCAAGCAGAAGAATATGACAATTTTAGAGCAAAACTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003509.10 |
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