Pregenerated sensors for ST7L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045576Ensembl transcript IDs: ENSMUST00000059271.13, ENSMUST00000106769.8, ENSMUST00000123876.6, ENSMUST00000183914.8, ENSMUST00000199335.2, ENSMUST00000200132.5
Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR TCA 90 bp | TCTGAGGGTTTCACTTTCTCTGCTGTTGGCAGGAGAGCCCGGCTCTaGAATGCTACTCTCTGTTCCTCCCATCAGTGGCCGCAAATGGCT | + |
Preference number: 1 (lower is better) Translates to: SEGFTFSAVGRRARL*NATLCSSHQWPQMA Trigger: AGCCATTTGCGGCCACTGATGGGAGGAACAGAGAGTAGCATTTCAGAGCCGGGCTCTCCTGCCAACAGCAGAGAAAGTGAAACCCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR GCA 90 bp | AAGCACTCTGCAGGGCAGCCACTTCTCCAGCCCGATAAGGCAGCATaGTATCCTGGTGTTCCAATTCCTCGCATTGGTGGCCAGAATAAC | + |
Preference number: 1 (lower is better) Translates to: KHSAGQPLLQPDKAA*YPGVPIPRIGGQNN Trigger: GTTATTCTGGCCACCAATGCGAGGAATTGGAACACCAGGATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCCCTGCAGAGTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR GCA 90 bp | GGGTTTCACTTTCTCTGCTGTTGGCAGGAGAGCCCGGCTCTGAAATaGTACTCTCTGTTCCTCCCATCAGTGGCCGCAAATGGCTTATGG | + |
Preference number: 1 (lower is better) Translates to: GFHFLCCWQESPALK*YSLFLPSVAANGLW Trigger: CCATAAGCCATTTGCGGCCACTGATGGGAGGAACAGAGAGTAGCATTTCAGAGCCGGGCTCTCCTGCCAACAGCAGAGAAAGTGAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR GCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATaGTTTCCTGCGCTGGTTTATAAATACTCCACACAAGTCCTGGAG | + |
Preference number: 1 (lower is better) Translates to: SVFRCSCGLALADER*FPALVYKYSTQVLE Trigger: CTCCAGGACTTGTGTGGAGTATTTATAAACCAGCGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR TCA 90 bp | TTAAAGGGTTTCTCCAGACCTTGCATTCTGATAGATGGTGGTGTCTaGGGGTTTCACTTTCTCTGCTGTTGGCAGGAGAGCCCGGCTCTG | + |
Preference number: 1 (lower is better) Translates to: LKGFSRPCILIDGGV*GFHFLCCWQESPAL Trigger: CAGAGCCGGGCTCTCCTGCCAACAGCAGAGAAAGTGAAACCCTCAGACACCACCATCTATCAGAATGCAAGGTCTGGAGAAACCCTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR TCA 90 bp | AAAACTAGGAGAACCTTTGAGCCAAGAAGCACATGCCACGCATGGTaGAATGTCCCTCCTGTGCCTTCTATGCACTTATTCCCCACTATA | + |
Preference number: 1 (lower is better) Translates to: KTRRTFEPRSTCHAW*NVPPVPSMHLFPTI Trigger: TATAGTGGGGAATAAGTGCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTCTTGGCTCAAAGGTTCTCCTAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR TCA 90 bp | AAGAGGGTGGTGTTTCTCGTGCATAGACCATATGTTATGAAGTGGTaGAAAACTAGAAAAGGAGCCTCCAGTTCCTTGTTGCATGTCTTC | + |
Preference number: 1 (lower is better) Translates to: KRVVFLVHRPYVMKW*KTRKGASSSLLHVF Trigger: GAAGACATGCAACAAGGAACTGGAGGCTCCTTTTCTAGTTTTTCACCACTTCATAACATATGGTCTATGCACGAGAAACACCACCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR TCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGAGGAGAGCCCGGCTCTaGAATGCTACTCTCTGTTCC | + |
Preference number: 2 (lower is better) Translates to: VFRCSCGLALADERCFPARRARL*NATLCS Trigger: GGAACAGAGAGTAGCATTTCAGAGCCGGGCTCTCCT...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR GCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGCTCGCCTTTAATCCCTaGACTTGGGAGGCAGAGGCA | + |
Preference number: 2 (lower is better) Translates to: VFRCSCGLALADERCFPALAFNP*TWEAEA Trigger: TGCCTCTGCCTCCCAAGTGCAGGGATTAAAGGCGAG...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR-3UTR GCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGGGGTTTCACTTTCTCTaGTGTTGGCAGGAGAGCCCG | + |
Preference number: 2 (lower is better) Translates to: VFRCSCGLALADERCFPAGFHFL*CWQESP Trigger: CGGGCTCTCCTGCCAACAGCAGAGAAAGTGAAACCC...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR TCA 90 bp | CGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGCTGGTTGTGAAAAAGGTCTGGTaGTCCTGGGCAGACAAGTTC | + |
Preference number: 2 (lower is better) Translates to: RCSCGLALADERCFPALVVKKVW*SWADKF Trigger: GAACTTGTCTGCCCAGGATCACCAGACCTTTTTCAC...AACCAGCGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR CAA 90 bp | GGTGTCAGAGCTGGGATCAGAGCAAAGCAGTTTGGTTCCAGAGTCTaGCTCATAAGCACTCTGCAGGGCAGCCACTTCTCCAGCCCGATA | + |
Preference number: 2 (lower is better) Translates to: GVRAGIRAKQFGSRV*LISTLQGSHFSSPI Trigger: TATCGGGCTGGAGAAGTGGCTGCCCTGCAGAGTGCTTATGAGCAAGACTCTGGAACCAAACTGCTTTGCTCTGATCCCAGCTCTGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR TCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGACCAGAGCTTGTGTTTaGCACAGTCATGGTAGAAGC | + |
Preference number: 2 (lower is better) Translates to: VFRCSCGLALADERCFPATRACV*HSHGRS Trigger: GCTTCTACCATGACTGTGTCAAACACAAGCTCTGGT...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR CAA 90 bp | AGCCCGATAAGGCAGCATGCTATCCTGGTGTTCCAATTCCTCGCATaGGTGGCCAGAATAACTGGTGGTGGTGGTGGAAGGAGGCTTCTT | + |
Preference number: 2 (lower is better) Translates to: SPIRQHAILVFQFLA*VARITGGGGGRRLL Trigger: AAGAAGCCTCCTTCCACCACCACCACCAGTTATTCTGGCCACCAATGCGAGGAATTGGAACACCAGGATAGCATGCTGCCTTATCGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR CCA 90 bp | CGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGCTGGTTGTAGGACGTAGGCAGTaGCACAGTCATTGTTTAACT | + |
Preference number: 2 (lower is better) Translates to: RCSCGLALADERCFPALVVGRRQ*HSHCLT Trigger: AGTTAAACAATGACTGTGCCACTGCCTACGTCCTAC...AACCAGCGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR CAA 90 bp | CATTCTGATAGATGGTGGTGTCTGAGGGTTTCACTTTCTCTGCTGTaGGCAGGAGAGCCCGGCTCTGAAATGCTACTCTCTGTTCCTCCC | + |
Preference number: 2 (lower is better) Translates to: HSDRWWCLRVSLSLL*AGEPGSEMLLSVPP Trigger: GGGAGGAACAGAGAGTAGCATTTCAGAGCCGGGCTCTCCTGCCAACAGCAGAGAAAGTGAAACCCTCAGACACCACCATCTATCAGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR TCA 90 bp | GGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCCTGGTGTTCCAATTCATGCCTCTCACACAGTaGGGTCATGTTAGTCTGAGA | + |
Preference number: 2 (lower is better) Translates to: GSHFSSPIRQHAILVFQFMPLTQ*GHVSLR Trigger: TCTCAGACTAACATGACCTCACTGTGTGAGAGGCAT...GAATTGGAACACCAGGATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR TCA 90 bp | GGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCCTGGTGTTCCAATTCTTCCTCTCCTCTAAGTaGACAGGATCCCCTTTTTGG | + |
Preference number: 2 (lower is better) Translates to: GSHFSSPIRQHAILVFQFFLSSK*TGSPFW Trigger: CCAAAAAGGGGATCCTGTTCACTTAGAGGAGAGGAA...GAATTGGAACACCAGGATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR GCA 90 bp | GGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCCTGGTGTTCCAATTCACCCATCTCTCTCGTTaGCTGTCTGGATCGTTCATA | + |
Preference number: 2 (lower is better) Translates to: GSHFSSPIRQHAILVFQFTHLSR*LSGSFI Trigger: TATGAACGATCCAGACAGGCAACGAGAGAGATGGGT...GAATTGGAACACCAGGATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR GCA 90 bp | ATAAGCACTCTGCAGGGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCCCTCCAGTTCCTTGTTaGATGTCTTCTGTGGAAGCA | + |
Preference number: 2 (lower is better) Translates to: ISTLQGSHFSSPIRQHAIPPVPC*MSSVEA Trigger: TGCTTCCACAGAAGACATGCAACAAGGAACTGGAGG...GATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCCCTGCAGAGTGCTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR GCA 90 bp | CGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGCTGGTTATTTCTTTCCCTCCATaGCTTCTGCATAACTGTGTC | + |
Preference number: 2 (lower is better) Translates to: RCSCGLALADERCFPALVISFPP*LLHNCV Trigger: GACACAGTTATGCAGAAGGCATGGAGGGAAAGAAAT...AACCAGCGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR CCA 90 bp | GGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCCTGGTGTTCCAATTCTCCCTGAGCAGCAGTTaGAAGTCATTTGTCTTGGAG | + |
Preference number: 2 (lower is better) Translates to: GSHFSSPIRQHAILVFQFSLSSS*KSFVLE Trigger: CTCCAAGACAAATGACTTCCAACTGCTGCTCAGGGA...GAATTGGAACACCAGGATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR TCA 90 bp | ATAAGCACTCTGCAGGGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCTGGAAGGAGGCTTCTTaGGCTTTAAAAGTGCATGCA | + |
Preference number: 2 (lower is better) Translates to: ISTLQGSHFSSPIRQHAIWKEAS*ALKVHA Trigger: TGCATGCACTTTTAAAGCTCAAGAAGCCTCCTTCCA...GATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCCCTGCAGAGTGCTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR GCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGTATGATGATTGTGTTTaGATGATCCTGGGGACACAT | + |
Preference number: 2 (lower is better) Translates to: VFRCSCGLALADERCFPAYDDCV*MILGTH Trigger: ATGTGTCCCCAGGATCATGCAAACACAATCATCATA...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR-3UTR TCA 90 bp | GGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCCTGGTGTTCCAATTCAGGGAAATACACTATTaGCTGCTCCATCTTTGTTGC | + |
Preference number: 2 (lower is better) Translates to: GSHFSSPIRQHAILVFQFREIHY*LLHLCC Trigger: GCAACAAAGATGGAGCAGTCAATAGTGTATTTCCCT...GAATTGGAACACCAGGATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR GCA 90 bp | GGCATGTGTGTGAAAGTGAGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCAGCCCGGCTCTGAAATaGTACTCTCTGTTCCTCCCA | + |
Preference number: 2 (lower is better) Translates to: GMCVKVREQLSKLGSLPPSPALK*YSLFLP Trigger: TGGGAGGAACAGAGAGTAGCATTTCAGAGCCGGGCT...GGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCTCACTTTCACACACATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR CCA 90 bp | CTGCAGCGAAGCCTGAGCCGATCCTTTCTTAACATGCTCCTACAAGAGGGTGGTGGGACACATTCATCATaGCATGTGTGTGAAAGTGAG | + |
Preference number: 2 (lower is better) Translates to: LQRSLSRSFLNMLLQEGGGTHSS*HVCESE Trigger: CTCACTTTCACACACATGCCATGATGAATGTGTCCC...ACCACCCTCTTGTAGGAGCATGTTAAGAAAGGATCGGCTCAGGCTTCGCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR CCA 90 bp | CATGCTGAGGGCTCTGGTGCTGGCATTGCTGTGACCGTCTATAAATTATCTCTCTGTTCCTCCCATCAGTaGCCGCAAATGGCTTATGGA | + |
Preference number: 2 (lower is better) Translates to: HAEGSGAGIAVTVYKLSLCSSHQ*PQMAYG Trigger: TCCATAAGCCATTTGCGGCCACTGATGGGAGGAACA...GAGAGATAATTTATAGACGGTCACAGCAATGCCAGCACCAGAGCCCTCAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR TCA 90 bp | CTACTCTCTGTTCCTCCCATCAGTGGCCGCAAATGGCTTATGGACACTTGTTCAACCAGAGCTTGTGTTTaGCACAGTCATGGTAGAAGC | + |
Preference number: 2 (lower is better) Translates to: LLSVPPISGRKWLMDTCSTRACV*HSHGRS Trigger: GCTTCTACCATGACTGTGTCAAACACAAGCTCTGGT...TGAACAAGTGTCCATAAGCCATTTGCGGCCACTGATGGGAGGAACAGAGAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR TCA 90 bp | AGTGAGCTCCAGAACAGCCAGGGCTACACAGAGAAATCTTGCCTCAAAATAAATACATGCCACGCATGGTaGAATGTCCCTCCTGTGCCT | + |
Preference number: 2 (lower is better) Translates to: SELQNSQGYTEKSCLKINTCHAW*NVPPVP Trigger: AGGCACAGGAGGGACATTTCACCATGCGTGGCATGT...ATTTATTTTGAGGCAAGATTTCTCTGTGTAGCCCTGGCTGTTCTGGAGCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR-3UTR GCA 90 bp | ATGATCCTGGGGACACATTCATCATGGCATGTGTGTGAAAGTGAGAGAACAACTCTCGCCTTTAATCCCTaGACTTGGGAGGCAGAGGCA | + |
Preference number: 2 (lower is better) Translates to: MILGTHSSWHVCESERTTLAFNP*TWEAEA Trigger: TGCCTCTGCCTCCCAAGTGCAGGGATTAAAGGCGAG...AGTTGTTCTCTCACTTTCACACACATGCCATGATGAATGTGTCCCCAGGATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR-3UTR GCA 90 bp | GGCATGTGTGTGAAAGTGAGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCCTCTCCTGCCCTGAGTaGCTGTTTAAACAACCTTTC | + |
Preference number: 2 (lower is better) Translates to: GMCVKVREQLSKLGSLPPLSCPE*LFKQPF Trigger: GAAAGGTTGTTTAAACAGGCACTCAGGGCAGGAGAG...GGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCTCACTTTCACACACATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR TCA 90 bp | GTAAAAGTCATTACCAAGTTTCCTTTCCCCATTAGGAGGGAATGGAATAGTCAGACATGCCACGCATGGTaGAATGTCCCTCCTGTGCCT | + |
Preference number: 2 (lower is better) Translates to: VKVITKFPFPIRREWNSQTCHAW*NVPPVP Trigger: AGGCACAGGAGGGACATTTCACCATGCGTGGCATGT...CTGACTATTCCATTCCCTCCTAATGGGGAAAGGAAACTTGGTAATGACTTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR GCA 90 bp | TTGCTTCTTCTTCGGCCAGTAGGACGTAGGCAGTGGCACAGTCATTGTTTAACTGAAATGTCCCTCCTGTaGCTTCTATGCACTTATTCC | + |
Preference number: 2 (lower is better) Translates to: LLLLRPVGRRQWHSHCLTEMSLL*LLCTYS Trigger: GGAATAAGTGCATAGAAGGCACAGGAGGGACATTTC...AGTTAAACAATGACTGTGCCACTGCCTACGTCCTACTGGCCGAAGAAGAAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR GCA 90 bp | AGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTTATATGAGTTCGAACTTGCCAGGCAATGGTGCTaGTCGCCTTTAATCCCTGCA | + |
Preference number: 2 (lower is better) Translates to: REQLSKLGSLPPLYEFELARQWC*SPLIPA Trigger: TGCAGGGATTAAAGGCGAGCAGCACCATTGCCTGGC...AAGTTCGAACTCATATAAGGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR-3UTR GCA 90 bp | ATAAGCACTCTGCAGGGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCTTCTACTTTCAAAGGTaGAATTTTTCATTCTCGCGT | + |
Preference number: 2 (lower is better) Translates to: ISTLQGSHFSSPIRQHAIFYFQR*NFSFSR Trigger: ACGCGAGAATGAAAAATTGCACCTTTGAAAGTAGAA...GATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCCCTGCAGAGTGCTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR TCA 90 bp | ATGATCCTGGGGACACATTCATCATGGCATGTGTGTGAAAGTGAGAGAACAACTACCAGAGCTTGTGTTTaGCACAGTCATGGTAGAAGC | + |
Preference number: 2 (lower is better) Translates to: MILGTHSSWHVCESERTTTRACV*HSHGRS Trigger: GCTTCTACCATGACTGTGTCAAACACAAGCTCTGGT...AGTTGTTCTCTCACTTTCACACACATGCCATGATGAATGTGTCCCCAGGATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR-3UTR GCA 90 bp | GAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTTATATGAGTTCGAACTTATCAATAGAGATCCCCTaGCTCTGCCTCCCAAGTGCT | + |
Preference number: 2 (lower is better) Translates to: ENNFLNLALSHPYMSSNLSIEIP*LCLPSA Trigger: AGCACTTGGGAGGCAGAGGCAGGGGATCTCTATTGA...TAAGTTCGAACTCATATAAGGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR GCA 90 bp | ATCATTCTAAAAGTGCCTTCCCATGTACACTGCAGGAGATTCAGAGCACCTTCTTCCCTCCATGCCTTCTaGATAACTGTGTCTGAAGGA | + |
Preference number: 2 (lower is better) Translates to: IILKVPSHVHCRRFRAPSSLHAF*ITVSEG Trigger: TCCTTCAGACACAGTTATGCAGAAGGCATGGAGGGA...AGAAGGTGCTCTGAATCTCCTGCAGTGTACATGGGAAGGCACTTTTAGAATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR CCA 90 bp | AAGAAGCACATGCCACGCATGGTGAAATGTCCCTCCTGTGCCTTCTATGCACTTGTGCCACATAGAACTTaGGTGTCAGTGAACTTAAAA | + |
Preference number: 2 (lower is better) Translates to: KKHMPRMVKCPSCAFYALVPHRT*VSVNLK Trigger: TTTTAAGTTCACTGACACCCAAGTTCTATGTGGCAC...AAGTGCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR CAA 90 bp | CGTAAGAGCCAACACATCTGCAAGGCACAAAATAGACTAGTTCTTTaGGGTTCTGTTGTTGTTGACCCCCTCACATCTCAATACCTCTCA | + |
Preference number: 2 (lower is better) Translates to: RKSQHICKAQNRLVL*GSVVVDPLTSQYLS Trigger: TGAGAGGTATTGAGATGTGAGGGGGTCAACAACAACAGAACCCAAAAGAACTAGTCTATTTTGTGCCTTGCAGATGTGTTGGCTCTTACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR CAA 90 bp | TACTTTACAACGAAGACTAGAGAAGATTGCATAACTTACATGAGGTaGCATAGGCGGTGTCAGAGCTGGGATCAGAGCAAAGCAGTTTGG | + |
Preference number: 2 (lower is better) Translates to: YFTTKTREDCITYMR*HRRCQSWDQSKAVW Trigger: CCAAACTGCTTTGCTCTGATCCCAGCTCTGACACCGCCTATGCAACCTCATGTAAGTTATGCAATCTTCTCTAGTCTTCGTTGTAAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR TCA 90 bp | GCTTCGCTATCTCCTCGCTTCAGAATGTGTTCTGGAGGTAAGATTAAACTTTTCATAGATGGTGGTGTCTaGGGGTTTCACTTTCTCTGC | + |
Preference number: 2 (lower is better) Translates to: ASLSPRFRMCSGGKIKLFIDGGV*GFHFLC Trigger: GCAGAGAAAGTGAAACCCTCAGACACCACCATCTAT...GAAAAGTTTAATCTTACCTCCAGAACACATTCTGAAGCGAGGAGATAGCGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR GCA 90 bp | ATGATCCTGGGGACACATTCATCATGGCATGTGTGTGAAAGTGAGAGAACAACTGAAATGTCCCTCCTGTaGCTTCTATGCACTTATTCC | + |
Preference number: 2 (lower is better) Translates to: MILGTHSSWHVCESERTTEMSLL*LLCTYS Trigger: GGAATAAGTGCATAGAAGGCACAGGAGGGACATTTC...AGTTGTTCTCTCACTTTCACACACATGCCATGATGAATGTGTCCCCAGGATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR-3UTR GCA 90 bp | AATAGATGTCCTTTCTCTAATGGGTATGGAATCATTCTAAAAGTGCCTTCCCATCCTGTCACTGGAGCTTaGAGCGTGTCAGGTAGCTTT | + |
Preference number: 2 (lower is better) Translates to: NRCPFSNGYGIILKVPSHPVTGA*SVSGSF Trigger: AAAGCTACCTGACACGCTGCAAGCTCCAGTGACAGG...ATGGGAAGGCACTTTTAGAATGATTCCATACCCATTAGAGAAAGGACATCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR GCA 90 bp | AAATACTCCACACAAGTCCTGGAGATCATACTCACAGCTTTAGCAAAAACACCCAGATGTCCCTGTAAGTaGCACATAGAACTTGGGTGT | + |
Preference number: 2 (lower is better) Translates to: KYSTQVLEIILTALAKTPRCPCK*HIELGC Trigger: ACACCCAAGTTCTATGTGGCACTTACAGGGACATCT...GGGTGTTTTTGCTAAAGCTGTGAGTATGATCTCCAGGACTTGTGTGGAGTATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR CCA 90 bp | ATGATCCTGGGGACACATTCATCATGGCATGTGTGTGAAAGTGAGAGAACAACTTTGCATTCTGATAGATaGTGGTGTCTGAGGGTTTCA | + |
Preference number: 2 (lower is better) Translates to: MILGTHSSWHVCESERTTLHSDR*WCLRVS Trigger: TGAAACCCTCAGACACCACCATCTATCAGAATGCAA...AGTTGTTCTCTCACTTTCACACACATGCCATGATGAATGTGTCCCCAGGATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR TCA 90 bp | ATCATTCTAAAAGTGCCTTCCCATGTACACTGCAGGAGATTCAGAGCACCTTCTTGGAGAGAATTTATCTaGGACGGTTCTTGTTTTCAG | + |
Preference number: 2 (lower is better) Translates to: IILKVPSHVHCRRFRAPSWREFI*DGSCFQ Trigger: CTGAAAACAAGAACCGTCTCAGATAAATTCTCTCCA...AGAAGGTGCTCTGAATCTCCTGCAGTGTACATGGGAAGGCACTTTTAGAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR GCA 90 bp | GTAAAAGTCATTACCAAGTTTCCTTTCCCCATTAGGAGGGAATGGAATAGTCAGGAAATGTCCCTCCTGTaGCTTCTATGCACTTATTCC | + |
Preference number: 2 (lower is better) Translates to: VKVITKFPFPIRREWNSQEMSLL*LLCTYS Trigger: GGAATAAGTGCATAGAAGGCACAGGAGGGACATTTC...CTGACTATTCCATTCCCTCCTAATGGGGAAAGGAAACTTGGTAATGACTTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR CCA 90 bp | GCTTCGCTATCTCCTCGCTTCAGAATGTGTTCTGGAGGTAAGATTAAACTTTTCCATTCTGATAGATGGTaGTGTCTGAGGGTTTCACTT | + |
Preference number: 2 (lower is better) Translates to: ASLSPRFRMCSGGKIKLFHSDRW*CLRVSL Trigger: AAGTGAAACCCTCAGACACCACCATCTATCAGAATG...GAAAAGTTTAATCTTACCTCCAGAACACATTCTGAAGCGAGGAGATAGCGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR CCA 90 bp | AGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTTATATGAGTTCGAACTTTGCTTTGATTCGAGCTaGAGGATTTCTTTCCCTCCA | + |
Preference number: 2 (lower is better) Translates to: REQLSKLGSLPPLYEFELCFDSS*RISFPP Trigger: TGGAGGGAAAGAAATCCTCCAGCTCGAATCAAAGCA...AAGTTCGAACTCATATAAGGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR TCA 90 bp | TCTCCTCGCTTCAGAATGTGTTCTGGAGGTAAGATTAAACTTTTCATCTCTAGTAGTCTGTTTCACAGGTaGAAAAGGTCTGGTGATCCT | + |
Preference number: 2 (lower is better) Translates to: SPRFRMCSGGKIKLFISSSLFHR*KRSGDP Trigger: AGGATCACCAGACCTTTTTCACCTGTGAAACAGACT...ACTAGAGATGAAAAGTTTAATCTTACCTCCAGAACACATTCTGAAGCGAGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR TCA 90 bp | TCTCCTCGCTTCAGAATGTGTTCTGGAGGTAAGATTAAACTTTTCATCTCTAGTTGCTTAACCCTTTTCTaGAGGCTGTTTCTGGAGAGA | + |
Preference number: 2 (lower is better) Translates to: SPRFRMCSGGKIKLFISSCLTLF*RLFLER Trigger: TCTCTCCAGAAACAGCCTTCAGAAAAGGGTTAAGCA...ACTAGAGATGAAAAGTTTAATCTTACCTCCAGAACACATTCTGAAGCGAGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000183914.8 ENSMUST00000199335.2 |
||
3UTR-3UTR GCA 90 bp | GTAAAAGTCATTACCAAGTTTCCTTTCCCCATTAGGAGGGAATGGAATAGTCAGTATGATGATTGTGTTTaGATGATCCTGGGGACACAT | + |
Preference number: 2 (lower is better) Translates to: VKVITKFPFPIRREWNSQYDDCV*MILGTH Trigger: ATGTGTCCCCAGGATCATGCAAACACAATCATCATA...CTGACTATTCCATTCCCTCCTAATGGGGAAAGGAAACTTGGTAATGACTTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR GCA 90 bp | GTTTATAAATACTCCACACAAGTCCTGGAGATCATACTCACAGCTTTAGCAAAAGAAAGCATAGGCAATTaGTTCGCTATCTCCTCGCTT | + |
Preference number: 2 (lower is better) Translates to: VYKYSTQVLEIILTALAKESIGN*FAISSL Trigger: AAGCGAGGAGATAGCGAAGCAATTGCCTATGCTTTC...TTTTGCTAAAGCTGTGAGTATGATCTCCAGGACTTGTGTGGAGTATTTATAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR CCA 90 bp | CTCGCTTCAGAATGTGTTCTGGAGGTAAGATTAAACTTTTCATCTCTAGTAAGTGATGTACCATGCTTATaGAAGTACCACCATTCAAAT | + |
Preference number: 2 (lower is better) Translates to: LASECVLEVRLNFSSLVSDVPCL*KYHHSN Trigger: ATTTGAATGGTGGTACTTCCATAAGCATGGTACATC...ACTTACTAGAGATGAAAAGTTTAATCTTACCTCCAGAACACATTCTGAAGCGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR CAA 90 bp | ATAATATCCACTTACTTCTTACTGTGGAGGAATAGTTCTACACAGTaGATATACGTTAAACACATTTACCCCAACAACACCTATGTAGCA | + |
Preference number: 2 (lower is better) Translates to: IISTYFLLWRNSSTQ*IYVKHIYPNNTYVA Trigger: TGCTACATAGGTGTTGTTGGGGTAAATGTGTTTAACGTATATCAACTGTGTAGAACTATTCCTCCACAGTAAGAAGTAAGTGGATATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR CAA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGTCACTTTCTCTGCTGTaGGCAGGAGAGCCCGGCTCT | + |
Preference number: 3 (lower is better) Translates to: VFRCSCGLALADERCFPASLSLL*AGEPGS Trigger: AGAGCCGGGCTCTCCTGCCAACAGCAGAGAAAGTGA...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR GCA 72 bp | GCAGGGCAGCCACTTCTCCAGCCCGATAAGGCAGCATaGTATCCTGGTGTTCCAATTCCTCGCATTGGTGGC | + |
Preference number: 3 (lower is better) Translates to: AGQPLLQPDKAA*YPGVPIPRIGG Trigger: GCCACCAATGCGAGGAATTGGAACACCAGGATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR GCA 72 bp | CAGCTCTTGCCGTCTACAAGTGTCTTCCGCTGCTCGTaGGGGTTAGCACTGGCAGATGAGAGATGCTTTCCT | + |
Preference number: 3 (lower is better) Translates to: QLLPSTSVFRCS*GLALADERCFP Trigger: AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACTTGTAGACGGCAAGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR-3UTR CAA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGTCACATCACCAGAGCTaGTGTTTGACACAGTCATGG | + |
Preference number: 3 (lower is better) Translates to: VFRCSCGLALADERCFPASHHQS*CLTQSW Trigger: CCATGACTGTGTCAAACACAAGCTCTGGTGATGTGA...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR-3UTR CAA 90 bp | CGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGCTGGTTTCACATCACCAGAGCTaGTGTTTGACACAGTCATGG | + |
Preference number: 3 (lower is better) Translates to: RCSCGLALADERCFPALVSHHQS*CLTQSW Trigger: CCATGACTGTGTCAAACACAAGCTCTGGTGATGTGA...AACCAGCGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR CAA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGTGGATCAGGCTGTTCTaGAACTCAATAGAGATCCCC | + |
Preference number: 3 (lower is better) Translates to: VFRCSCGLALADERCFPAWIRLF*NSIEIP Trigger: GGGGATCTCTATTGAGTTCAAGAACAGCCTGATCCA...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR GCA 72 bp | TTTCTCTGCTGTTGGCAGGAGAGCCCGGCTCTGAAATaGTACTCTCTGTTCCTCCCATCAGTGGCCGCAAAT | + |
Preference number: 3 (lower is better) Translates to: FLCCWQESPALK*YSLFLPSVAAN Trigger: ATTTGCGGCCACTGATGGGAGGAACAGAGAGTAGCATTTCAGAGCCGGGCTCTCCTGCCAACAGCAGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR CAA 90 bp | GGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCCTGGTGTTCCAATTCCTCCCTGAGCAGCAGTaGGAAGTCATTTGTCTTGGA | + |
Preference number: 3 (lower is better) Translates to: GSHFSSPIRQHAILVFQFLPEQQ*EVICLG Trigger: TCCAAGACAAATGACTTCCAACTGCTGCTCAGGGAG...GAATTGGAACACCAGGATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR CAA 90 bp | CTGCAGCGAAGCCTGAGCCGATCCTTTCTTAACATGCTCCTACAAGAGGGTGGTTTGACTGCTCCATCTTaGTTGCAGATTGCAGACCTG | + |
Preference number: 3 (lower is better) Translates to: LQRSLSRSFLNMLLQEGGLTAPS*LQIADL Trigger: CAGGTCTGCAATCTGCAACAAAGATGGAGCAGTCAA...ACCACCCTCTTGTAGGAGCATGTTAAGAAAGGATCGGCTCAGGCTTCGCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR GCA 72 bp | CGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATaGTTTCCTGCGCTGGTTTATAAATACTCCACACAA | + |
Preference number: 3 (lower is better) Translates to: RCSCGLALADER*FPALVYKYSTQ Trigger: TTGTGTGGAGTATTTATAAACCAGCGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR TCA 72 bp | TTCTCCAGACCTTGCATTCTGATAGATGGTGGTGTCTaGGGGTTTCACTTTCTCTGCTGTTGGCAGGAGAGC | + |
Preference number: 3 (lower is better) Translates to: FSRPCILIDGGV*GFHFLCCWQES Trigger: GCTCTCCTGCCAACAGCAGAGAAAGTGAAACCCTCAGACACCACCATCTATCAGAATGCAAGGTCTGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR GCA 72 bp | GGTGTCAGTGAACTTAAAAACCCTGTCACTGGAGCTTaGAGCGTGTCAGGTAGCTTTTCCTGTGGTAGCGTA | + |
Preference number: 3 (lower is better) Translates to: GVSELKNPVTGA*SVSGSFSCGSV Trigger: TACGCTACCACAGGAAAAGCTACCTGACACGCTGCAAGCTCCAGTGACAGGGTTTTTAAGTTCACTGACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR CAA 90 bp | CTCCCAAGTGCTGGGATTAAAGGCATGCAACACCATGGCCTGGCTCAGAATAAATCACATCACCAGAGCTaGTGTTTGACACAGTCATGG | + |
Preference number: 3 (lower is better) Translates to: LPSAGIKGMQHHGLAQNKSHHQS*CLTQSW Trigger: CCATGACTGTGTCAAACACAAGCTCTGGTGATGTGA...TTTATTCTGAGCCAGGCCATGGTGTTGCATGCCTTTAATCCCAGCACTTGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR TCA 72 bp | AGAACCTTTGAGCCAAGAAGCACATGCCACGCATGGTaGAATGTCCCTCCTGTGCCTTCTATGCACTTATTC | + |
Preference number: 3 (lower is better) Translates to: RTFEPRSTCHAW*NVPPVPSMHLF Trigger: GAATAAGTGCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTCTTGGCTCAAAGGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR TCA 72 bp | GCTTTAGCAAAAACACCCATGACTTCAGGAAACTGGTaGGTGAGAAACGCTAGCATTGCGGTAGAGGAGCAC | + |
Preference number: 3 (lower is better) Translates to: ALAKTPMTSGNW*VRNASIAVEEH Trigger: GTGCTCCTCTACCGCAATGCTAGCGTTTCTCACTCACCAGTTTCCTGAAGTCATGGGTGTTTTTGCTAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR CCA 72 bp | GTCATTACCAAGTTTCCTTTCCCCATTAGGAGGGAATaGAATAGTCAGTCTGCAACCCACACACCCACACTC | + |
Preference number: 3 (lower is better) Translates to: VITKFPFPIRRE*NSQSATHTPTL Trigger: GAGTGTGGGTGTGTGGGTTGCAGACTGACTATTCCATTCCCTCCTAATGGGGAAAGGAAACTTGGTAATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR TCA 72 bp | CCCTTTTTGGTCCATTTGTCCATGCCTCTCACACAGTaGGGTCATGTTAGTCTGAGACACACTTATTCCCCA | + |
Preference number: 3 (lower is better) Translates to: PFLVHLSMPLTQ*GHVSLRHTYSP Trigger: TGGGGAATAAGTGTGTCTCAGACTAACATGACCTCACTGTGTGAGAGGCATGGACAAATGGACCAAAAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR CCA 72 bp | ATCTCTCTCGTTGCCTGTCTGGATCGTTCATATATGTaGGTTAAGTGCCTCCCCACTTCTTTTCTTCCTCTC | + |
Preference number: 3 (lower is better) Translates to: ISLVACLDRSYM*VKCLPTSFLPL Trigger: GAGAGGAAGAAAAGAAGTGGGGAGGCACTTAACCCACATATATGAACGATCCAGACAGGCAACGAGAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR CAA 90 bp | AGTGAGCTCCAGAACAGCCAGGGCTACACAGAGAAATCTTGCCTCAAAATAAATAAACTAGGAGAACCTTaGAGCCAAGAAGCACATGCC | + |
Preference number: 3 (lower is better) Translates to: SELQNSQGYTEKSCLKINKLGEP*SQEAHA Trigger: GGCATGTGCTTCTTGGCTCAAAGGTTCTCCTAGTTT...ATTTATTTTGAGGCAAGATTTCTCTGTGTAGCCCTGGCTGTTCTGGAGCTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR TCA 72 bp | CTGTGTCTGAAGGACGTAAAAAGTCTGTTTCACAGGTaGAAAAGGTCTGGTGATCCTGGGCAGACAAGTTCA | + |
Preference number: 3 (lower is better) Translates to: LCLKDVKSLFHR*KRSGDPGQTSS Trigger: TGAACTTGTCTGCCCAGGATCACCAGACCTTTTTCACCTGTGAAACAGACTTTTTACGTCCTTCAGACACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR CCA 72 bp | CAAGTGCTGGGATTAAAGGCATGCAACACCATGGCCTaGCTCAGAATAAACTATTCTCATGCCAGGAAAAGA | + |
Preference number: 3 (lower is better) Translates to: QVLGLKACNTMA*LRINYSHARKR Trigger: TCTTTTCCTGGCATGAGAATAGTTTATTCTGAGCCAGGCCATGGTGTTGCATGCCTTTAATCCCAGCACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR CCA 72 bp | GAAAAATTCAAGAACCCATCTCTCTCGTTGCCTGTCTaGATCGTTCATATATGTGGGTTAAGTGCCTCCCCA | + |
Preference number: 3 (lower is better) Translates to: EKFKNPSLSLPV*IVHICGLSASP Trigger: TGGGGAGGCACTTAACCCACATATATGAACGATCCAGACAGGCAACGAGAGAGATGGGTTCTTGAATTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR CAA 90 bp | AGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTTATATGAGTTCGAACTTAAACTAGGAGAACCTTaGAGCCAAGAAGCACATGCC | + |
Preference number: 3 (lower is better) Translates to: REQLSKLGSLPPLYEFELKLGEP*SQEAHA Trigger: GGCATGTGCTTCTTGGCTCAAAGGTTCTCCTAGTTT...AAGTTCGAACTCATATAAGGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR GCA 72 bp | CTGTTAGCTAGAACTTCAGGGAAATACACTATTGACTaGTCCATCTTTGTTGCAGATTGCAGACCTGCTCTA | + |
Preference number: 3 (lower is better) Translates to: LLARTSGKYTID*SIFVADCRPAL Trigger: TAGAGCAGGTCTGCAATCTGCAACAAAGATGGAGCAGTCAATAGTGTATTTCCCTGAAGTTCTAGCTAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR GCA 72 bp | GGTGAAAAACTAGAAAAGGAGCCTCCAGTTCCTTGTTaGATGTCTTCTGTGGAAGCATTTAAGTGTTGCACA | + |
Preference number: 3 (lower is better) Translates to: GEKLEKEPPVPC*MSSVEAFKCCT Trigger: TGTGCAACACTTAAATGCTTCCACAGAAGACATGCAACAAGGAACTGGAGGCTCCTTTTCTAGTTTTTCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR GCA 72 bp | TATGGAATCATTCTAAAAGTGCCTTCCCATGTACACTaGAGGAGATTCAGAGCACCTTCTATTCGTTTCCAG | + |
Preference number: 3 (lower is better) Translates to: YGIILKVPSHVH*RRFRAPSIRFQ Trigger: CTGGAAACGAATAGAAGGTGCTCTGAATCTCCTGCAGTGTACATGGGAAGGCACTTTTAGAATGATTCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR CAA 90 bp | GTTTGCATGATCCTGGGGACACATTCATCATGGCATGTGTGTGAAAGTGAGAGAATGGCTTATGGACACTaGTTCAATAAAAGATGTACC | + |
Preference number: 3 (lower is better) Translates to: VCMILGTHSSWHVCESERMAYGH*FNKRCT Trigger: GGTACATCTTTTATTGAACAAGTGTCCATAAGCCAT...TCTCTCACTTTCACACACATGCCATGATGAATGTGTCCCCAGGATCATGCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR-3UTR CAA 90 bp | AGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTTATATGAGTTCGAACTTCAGGGAAATACACTATaGACTGCTCCATCTTTGTTG | + |
Preference number: 3 (lower is better) Translates to: REQLSKLGSLPPLYEFELQGNTL*TAPSLL Trigger: CAACAAAGATGGAGCAGTCAATAGTGTATTTCCCTG...AAGTTCGAACTCATATAAGGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR-3UTR CAA 90 bp | GTTTATAAATACTCCACACAAGTCCTGGAGATCATACTCACAGCTTTAGCAAAACAGCATCTACAATGGTaGTTGCTTCTTCTTCGGCCA | + |
Preference number: 3 (lower is better) Translates to: VYKYSTQVLEIILTALAKQHLQW*LLLLRP Trigger: TGGCCGAAGAAGAAGCAACAACCATTGTAGATGCTG...TTTTGCTAAAGCTGTGAGTATGATCTCCAGGACTTGTGTGGAGTATTTATAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR GCA 72 bp | ACTATTTCTTACTTTACAACGAAGACTAGAGAAGATTaGATAACTTACATGAGGTTGCATAGGCGGTGTCAG | + |
Preference number: 3 (lower is better) Translates to: TISYFTTKTRED*ITYMRLHRRCQ Trigger: CTGACACCGCCTATGCAACCTCATGTAAGTTATGCAATCTTCTCTAGTCTTCGTTGTAAAGTAAGAAATAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR TCA 72 bp | CTTACTTCTTACTGTGGAGGAATAGTTCTACACAGTTaGTATACGTTAAACACATTTACCCCAACAACACCT | + |
Preference number: 3 (lower is better) Translates to: LTSYCGGIVLHS*YTLNTFTPTTP Trigger: AGGTGTTGTTGGGGTAAATGTGTTTAACGTATATCAACTGTGTAGAACTATTCCTCCACAGTAAGAAGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGCCAGGAACAGGTGCATaGGGACACCCCACGGCCCGC | + |
Preference number: 4 (lower is better) Translates to: VFRCSCGLALADERCFPAPGTGA*GHPTAR Trigger: GCGGGCCGTGGGGTGTCCCCATGCACCTGTTCCTGG...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGCAAGCCAGGAACAGGTaGATGGGGACACCCCACGGC | + |
Preference number: 4 (lower is better) Translates to: VFRCSCGLALADERCFPAQARNR*MGTPHG Trigger: GCCGTGGGGTGTCCCCATGCACCTGTTCCTGGCTTG...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | AGCCAAGAAGCACATGCCACGCATGGTGAAATGTCCCTCCTGTGCCTTCTATGCCAAGCCAGGAACAGGTaGATGGGGACACCCCACGGC | + |
Preference number: 4 (lower is better) Translates to: SQEAHATHGEMSLLCLLCQARNR*MGTPHG Trigger: GCCGTGGGGTGTCCCCATGCACCTGTTCCTGGCTTG...GCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTCTTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTAGGAGAGCCCGGCTCTaGAATGCTACTCTCTGTTCC | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPRRARL*NATLCS Trigger: GGAACAGAGAGTAGCATTTCAGAGCCGGGCTCTCCT...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGGTGAAAAAGGTCTGGTaGTCCTGGGCAGACAAGTTC | + |
Preference number: 4 (lower is better) Translates to: VFRCSCGLALADERCFPAVKKVW*SWADKF Trigger: GAACTTGTCTGCCCAGGATCACCAGACCTTTTTCAC...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTCAGGAAACTGGTGAGTaGGAAACGCTAGCATTGCGG | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPQETGE*ETLALR Trigger: CCGCAATGCTAGCGTTTCTCACTCACCAGTTTCCTG...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTAGCCCGGCTCTGAAATaGTACTCTCTGTTCCTCCCA | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPSPALK*YSLFLP Trigger: TGGGAGGAACAGAGAGTAGCATTTCAGAGCCGGGCT...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
3UTR CAA 72 bp | GCTGGGATCAGAGCAAAGCAGTTTGGTTCCAGAGTCTaGCTCATAAGCACTCTGCAGGGCAGCCACTTCTCC | + |
Preference number: 4 (lower is better) Translates to: AGIRAKQFGSRV*LISTLQGSHFS Trigger: GGAGAAGTGGCTGCCCTGCAGAGTGCTTATGAGCAAGACTCTGGAACCAAACTGCTTTGCTCTGATCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR TCA 90 bp | GGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCCTGGTGTTCCAATTCGTGAAAAAGGTCTGGTaGTCCTGGGCAGACAAGTTC | + |
Preference number: 4 (lower is better) Translates to: GSHFSSPIRQHAILVFQFVKKVW*SWADKF Trigger: GAACTTGTCTGCCCAGGATCACCAGACCTTTTTCAC...GAATTGGAACACCAGGATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR TCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGTGCTTAACCCTTTTCTaGAGGCTGTTTCTGGAGAGA | + |
Preference number: 4 (lower is better) Translates to: VFRCSCGLALADERCFPACLTLF*RLFLER Trigger: TCTCTCCAGAAACAGCCTTCAGAAAAGGGTTAAGCA...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGGGTTTCTCCAGACCTTaGATTCTGATAGATGGTGGT | + |
Preference number: 4 (lower is better) Translates to: VFRCSCGLALADERCFPAGFSRP*ILIDGG Trigger: ACCACCATCTATCAGAATGCAAGGTCTGGAGAAACC...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTCCTTCCCATGTACACTaGAGGAGATTCAGAGCACCT | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPPSHVH*RRFRAP Trigger: AGGTGCTCTGAATCTCCTGCAGTGTACATGGGAAGG...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGTATCAGCAGTCTCTGTaGAGCTGGGATAAGGGTAAA | + |
Preference number: 4 (lower is better) Translates to: VFRCSCGLALADERCFPAYQQSL*SWDKGK Trigger: TTTACCCTTATCCCAGCTGCACAGAGACTGCTGATA...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR CCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTTGTTCCTCCCATCAGTaGCCGCAAATGGCTTATGGA | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPCSSHQ*PQMAYG Trigger: TCCATAAGCCATTTGCGGCCACTGATGGGAGGAACA...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR CCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGACTCCACACAAGTCCTaGAGATCATACTCACAGCTT | + |
Preference number: 4 (lower is better) Translates to: VFRCSCGLALADERCFPATPHKS*RSYSQL Trigger: AAGCTGTGAGTATGATCTCCAGGACTTGTGTGGAGT...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
3UTR CAA 72 bp | AGATGGTGGTGTCTGAGGGTTTCACTTTCTCTGCTGTaGGCAGGAGAGCCCGGCTCTGAAATGCTACTCTCT | + |
Preference number: 4 (lower is better) Translates to: RWWCLRVSLSLL*AGEPGSEMLLS Trigger: AGAGAGTAGCATTTCAGAGCCGGGCTCTCCTGCCAACAGCAGAGAAAGTGAAACCCTCAGACACCACCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
CDS-3UTR TCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTATAGATGGTGGTGTCTaGGGGTTTCACTTTCTCTGC | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPIDGGV*GFHFLC Trigger: GCAGAGAAAGTGAAACCCTCAGACACCACCATCTAT...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | CTGACACACAGTCTATACTTAAGGCCAGAACCTGAAAGGGTCAATGAAAGGATGCAAGCCAGGAACAGGTaGATGGGGACACCCCACGGC | + |
Preference number: 4 (lower is better) Translates to: LTHSLYLRPEPERVNERMQARNR*MGTPHG Trigger: GCCGTGGGGTGTCCCCATGCACCTGTTCCTGGCTTG...CATCCTTTCATTGACCCTTTCAGGTTCTGGCCTTAAGTATAGACTGTGTGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | AAGAAGCACATGCCACGCATGGTGAAATGTCCCTCCTGTGCCTTCTATGCACTTGGGTTTCACTTTCTCTaGTGTTGGCAGGAGAGCCCG | + |
Preference number: 4 (lower is better) Translates to: KKHMPRMVKCPSCAFYALGFHFL*CWQESP Trigger: CGGGCTCTCCTGCCAACAGCAGAGAAAGTGAAACCC...AAGTGCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTTCCCTCCATGCCTTCTaGATAACTGTGTCTGAAGGA | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPSLHAF*ITVSEG Trigger: TCCTTCAGACACAGTTATGCAGAAGGCATGGAGGGA...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 |
||
CDS-3UTR GCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTCTCTCCTGCCCTGAGTaGCTGTTTAAACAACCTTTC | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPLSCPE*LFKQPF Trigger: GAAAGGTTGTTTAAACAGGCACTCAGGGCAGGAGAG...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 |
||
CDS-3UTR CCA 90 bp | GTAAAAGTCATTACCAAGTTTCCTTTCCCCATTAGGAGGGAATGGAATAGTCAGCCAGGAACAGGTGCATaGGGACACCCCACGGCCCGC | + |
Preference number: 4 (lower is better) Translates to: VKVITKFPFPIRREWNSQPGTGA*GHPTAR Trigger: GCGGGCCGTGGGGTGTCCCCATGCACCTGTTCCTGG...CTGACTATTCCATTCCCTCCTAATGGGGAAAGGAAACTTGGTAATGACTTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CCA 90 bp | AAGGCTGTTTCTGGAGAGAATTTATCTGAGACGGTTCTTGTTTTCAGTAGTGCTCCAGGAACAGGTGCATaGGGACACCCCACGGCCCGC | + |
Preference number: 4 (lower is better) Translates to: KAVSGENLSETVLVFSSAPGTGA*GHPTAR Trigger: GCGGGCCGTGGGGTGTCCCCATGCACCTGTTCCTGG...AGCACTACTGAAAACAAGAACCGTCTCAGATAAATTCTCTCCAGAAACAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
CDS-3UTR CCA 90 bp | GAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTTATATGAGTTCGAACTTACCAGGAACAGGTGCATaGGGACACCCCACGGCCCGC | + |
Preference number: 4 (lower is better) Translates to: ENNFLNLALSHPYMSSNLPGTGA*GHPTAR Trigger: GCGGGCCGTGGGGTGTCCCCATGCACCTGTTCCTGG...TAAGTTCGAACTCATATAAGGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
CDS-3UTR CCA 90 bp | AGCCAAGAAGCACATGCCACGCATGGTGAAATGTCCCTCCTGTGCCTTCTATGCTGTTCCTCCCATCAGTaGCCGCAAATGGCTTATGGA | + |
Preference number: 4 (lower is better) Translates to: SQEAHATHGEMSLLCLLCCSSHQ*PQMAYG Trigger: TCCATAAGCCATTTGCGGCCACTGATGGGAGGAACA...GCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTCTTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR CCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGTTGCATTCTGATAGATaGTGGTGTCTGAGGGTTTCA | + |
Preference number: 4 (lower is better) Translates to: VFRCSCGLALADERCFPALHSDR*WCLRVS Trigger: TGAAACCCTCAGACACCACCATCTATCAGAATGCAA...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | GGCATGTGTGTGAAAGTGAGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCAGGAGAGCCCGGCTCTaGAATGCTACTCTCTGTTCC | + |
Preference number: 4 (lower is better) Translates to: GMCVKVREQLSKLGSLPPRRARL*NATLCS Trigger: GGAACAGAGAGTAGCATTTCAGAGCCGGGCTCTCCT...GGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCTCACTTTCACACACATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTAGTCTGTTTCACAGGTaGAAAAGGTCTGGTGATCCT | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPSLFHR*KRSGDP Trigger: AGGATCACCAGACCTTTTTCACCTGTGAAACAGACT...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGTGGAGAGAATTTATCTaGGACGGTTCTTGTTTTCAG | + |
Preference number: 4 (lower is better) Translates to: VFRCSCGLALADERCFPAWREFI*DGSCFQ Trigger: CTGAAAACAAGAACCGTCTCAGATAAATTCTCTCCA...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTTGCTTAACCCTTTTCTaGAGGCTGTTTCTGGAGAGA | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPCLTLF*RLFLER Trigger: TCTCTCCAGAAACAGCCTTCAGAAAAGGGTTAAGCA...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTACTTCAGGAAACTGGTaGGTGAGAAACGCTAGCATT | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPTSGNW*VRNASI Trigger: AATGCTAGCGTTTCTCACTCACCAGTTTCCTGAAGT...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTAGATGTCCCTGTAAGTaGCACATAGAACTTGGGTGT | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPRCPCK*HIELGC Trigger: ACACCCAAGTTCTATGTGGCACTTACAGGGACATCT...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | AGGATGCAAAAACTAGGAGAACCTTTGAGCCAAGAAGCACATGCCACGCATGGTGGGTTTCACTTTCTCTaGTGTTGGCAGGAGAGCCCG | + |
Preference number: 4 (lower is better) Translates to: RMQKLGEPLSQEAHATHGGFHFL*CWQESP Trigger: CGGGCTCTCCTGCCAACAGCAGAGAAAGTGAAACCC...ACCATGCGTGGCATGTGCTTCTTGGCTCAAAGGTTCTCCTAGTTTTTGCATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR CCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTTGCTTTGATTCGAGCTaGAGGATTTCTTTCCCTCCA | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPCFDSS*RISFPP Trigger: TGGAGGGAAAGAAATCCTCCAGCTCGAATCAAAGCA...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 |
||
CDS-3UTR CCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGTAGGACGTAGGCAGTaGCACAGTCATTGTTTAACT | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPVGRRQ*HSHCLT Trigger: AGTTAAACAATGACTGTGCCACTGCCTACGTCCTAC...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 |
||
CDS-3UTR CCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTACTCCACACAAGTCCTaGAGATCATACTCACAGCTT | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPTPHKS*RSYSQL Trigger: AAGCTGTGAGTATGATCTCCAGGACTTGTGTGGAGT...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | AGGATGCAAAAACTAGGAGAACCTTTGAGCCAAGAAGCACATGCCACGCATGGTCAGGAAACTGGTGAGTaGGAAACGCTAGCATTGCGG | + |
Preference number: 4 (lower is better) Translates to: RMQKLGEPLSQEAHATHGQETGE*ETLALR Trigger: CCGCAATGCTAGCGTTTCTCACTCACCAGTTTCCTG...ACCATGCGTGGCATGTGCTTCTTGGCTCAAAGGTTCTCCTAGTTTTTGCATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | GAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTTATATGAGTTCGAACTTACAAGCCAGGAACAGGTaGATGGGGACACCCCACGGC | + |
Preference number: 4 (lower is better) Translates to: ENNFLNLALSHPYMSSNLQARNR*MGTPHG Trigger: GCCGTGGGGTGTCCCCATGCACCTGTTCCTGGCTTG...TAAGTTCGAACTCATATAAGGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTATTTCTTTCCCTCCATaGCTTCTGCATAACTGTGTC | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPISFPP*LLHNCV Trigger: GACACAGTTATGCAGAAGGCATGGAGGGAAAGAAAT...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 |
||
CDS-3UTR GCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGATAAATTATCTCTCCTaGCCTGAGTGCCTGTTTAAA | + |
Preference number: 4 (lower is better) Translates to: VFRCSCGLALADERCFPAINYLS*PECLFK Trigger: TTTAAACAGGCACTCAGGGCAGGAGAGATAATTTAT...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 |
||
CDS-3UTR GCA 90 bp | AGCCAAGAAGCACATGCCACGCATGGTGAAATGTCCCTCCTGTGCCTTCTATGCGAAAGCATAGGCAATTaGTTCGCTATCTCCTCGCTT | + |
Preference number: 4 (lower is better) Translates to: SQEAHATHGEMSLLCLLCESIGN*FAISSL Trigger: AAGCGAGGAGATAGCGAAGCAATTGCCTATGCTTTC...GCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTCTTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | GAAGCACATGCCACGCATGGTGAAATGTCCCTCCTGTGCCTTCTATGCACTTATCCTTCCCATGTACACTaGAGGAGATTCAGAGCACCT | + |
Preference number: 4 (lower is better) Translates to: EAHATHGEMSLLCLLCTYPSHVH*RRFRAP Trigger: AGGTGCTCTGAATCTCCTGCAGTGTACATGGGAAGG...ATAAGTGCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR CCA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGGATGTACCATGCTTATaGAAGTACCACCATTCAAAT | + |
Preference number: 4 (lower is better) Translates to: VFRCSCGLALADERCFPADVPCL*KYHHSN Trigger: ATTTGAATGGTGGTACTTCCATAAGCATGGTACATC...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR CCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTCATTCTGATAGATGGTaGTGTCTGAGGGTTTCACTT | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPHSDRW*CLRVSL Trigger: AAGTGAAACCCTCAGACACCACCATCTATCAGAATG...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | AAGAAGCACATGCCACGCATGGTGAAATGTCCCTCCTGTGCCTTCTATGCACTTATAGATGGTGGTGTCTaGGGGTTTCACTTTCTCTGC | + |
Preference number: 4 (lower is better) Translates to: KKHMPRMVKCPSCAFYALIDGGV*GFHFLC Trigger: GCAGAGAAAGTGAAACCCTCAGACACCACCATCTAT...AAGTGCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTTGGAGAGAATTTATCTaGGACGGTTCTTGTTTTCAG | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPWREFI*DGSCFQ Trigger: CTGAAAACAAGAACCGTCTCAGATAAATTCTCTCCA...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR CCA 90 bp | GGCATGTGTGTGAAAGTGAGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTGTTCCTCCCATCAGTaGCCGCAAATGGCTTATGGA | + |
Preference number: 4 (lower is better) Translates to: GMCVKVREQLSKLGSLPPCSSHQ*PQMAYG Trigger: TCCATAAGCCATTTGCGGCCACTGATGGGAGGAACA...GGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCTCACTTTCACACACATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR CCA 90 bp | CTGCAGCGAAGCCTGAGCCGATCCTTTCTTAACATGCTCCTACAAGAGGGTGGTCATTCTGATAGATGGTaGTGTCTGAGGGTTTCACTT | + |
Preference number: 4 (lower is better) Translates to: LQRSLSRSFLNMLLQEGGHSDRW*CLRVSL Trigger: AAGTGAAACCCTCAGACACCACCATCTATCAGAATG...ACCACCCTCTTGTAGGAGCATGTTAAGAAAGGATCGGCTCAGGCTTCGCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTTATACACAAGTACATTaGTATCTCGCCTCAGTTGAG | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPYTQVH*YLASVE Trigger: CTCAACTGAGGCGAGATACCAATGTACTTGTGTATA...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 |
||
CDS-3UTR TCA 90 bp | GTTTGCATGATCCTGGGGACACATTCATCATGGCATGTGTGTGAAAGTGAGAGAGTGAAAAAGGTCTGGTaGTCCTGGGCAGACAAGTTC | + |
Preference number: 4 (lower is better) Translates to: VCMILGTHSSWHVCESERVKKVW*SWADKF Trigger: GAACTTGTCTGCCCAGGATCACCAGACCTTTTTCAC...TCTCTCACTTTCACACACATGCCATGATGAATGTGTCCCCAGGATCATGCAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | GAAGCACATGCCACGCATGGTGAAATGTCCCTCCTGTGCCTTCTATGCACTTATTGCTTAACCCTTTTCTaGAGGCTGTTTCTGGAGAGA | + |
Preference number: 4 (lower is better) Translates to: EAHATHGEMSLLCLLCTYCLTLF*RLFLER Trigger: TCTCTCCAGAAACAGCCTTCAGAAAAGGGTTAAGCA...ATAAGTGCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | ATGATCCTGGGGACACATTCATCATGGCATGTGTGTGAAAGTGAGAGAACAACTCAGGAAACTGGTGAGTaGGAAACGCTAGCATTGCGG | + |
Preference number: 4 (lower is better) Translates to: MILGTHSSWHVCESERTTQETGE*ETLALR Trigger: CCGCAATGCTAGCGTTTCTCACTCACCAGTTTCCTG...AGTTGTTCTCTCACTTTCACACACATGCCATGATGAATGTGTCCCCAGGATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | AGTGAGCTCCAGAACAGCCAGGGCTACACAGAGAAATCTTGCCTCAAAATAAATAGCCCGGCTCTGAAATaGTACTCTCTGTTCCTCCCA | + |
Preference number: 4 (lower is better) Translates to: SELQNSQGYTEKSCLKINSPALK*YSLFLP Trigger: TGGGAGGAACAGAGAGTAGCATTTCAGAGCCGGGCT...ATTTATTTTGAGGCAAGATTTCTCTGTGTAGCCCTGGCTGTTCTGGAGCTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | GAAGCACATGCCACGCATGGTGAAATGTCCCTCCTGTGCCTTCTATGCACTTATGGTTTCTCCAGACCTTaGATTCTGATAGATGGTGGT | + |
Preference number: 4 (lower is better) Translates to: EAHATHGEMSLLCLLCTYGFSRP*ILIDGG Trigger: ACCACCATCTATCAGAATGCAAGGTCTGGAGAAACC...ATAAGTGCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | AGGATGCAAAAACTAGGAGAACCTTTGAGCCAAGAAGCACATGCCACGCATGGTTCCCTCCATGCCTTCTaGATAACTGTGTCTGAAGGA | + |
Preference number: 4 (lower is better) Translates to: RMQKLGEPLSQEAHATHGSLHAF*ITVSEG Trigger: TCCTTCAGACACAGTTATGCAGAAGGCATGGAGGGA...ACCATGCGTGGCATGTGCTTCTTGGCTCAAAGGTTCTCCTAGTTTTTGCATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR GCA 90 bp | GGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCCTGGTGTTCCAATTCATAAATTATCTCTCCTaGCCTGAGTGCCTGTTTAAA | + |
Preference number: 4 (lower is better) Translates to: GSHFSSPIRQHAILVFQFINYLS*PECLFK Trigger: TTTAAACAGGCACTCAGGGCAGGAGAGATAATTTAT...GAATTGGAACACCAGGATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR GCA 90 bp | CTCCCAAGTGCTGGGATTAAAGGCATGCAACACCATGGCCTGGCTCAGAATAAATATCAGCAGTCTCTGTaGAGCTGGGATAAGGGTAAA | + |
Preference number: 4 (lower is better) Translates to: LPSAGIKGMQHHGLAQNKYQQSL*SWDKGK Trigger: TTTACCCTTATCCCAGCTGCACAGAGACTGCTGATA...TTTATTCTGAGCCAGGCCATGGTGTTGCATGCCTTTAATCCCAGCACTTGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CCA 90 bp | GAAGCACATGCCACGCATGGTGAAATGTCCCTCCTGTGCCTTCTATGCACTTATACTCCACACAAGTCCTaGAGATCATACTCACAGCTT | + |
Preference number: 4 (lower is better) Translates to: EAHATHGEMSLLCLLCTYTPHKS*RSYSQL Trigger: AAGCTGTGAGTATGATCTCCAGGACTTGTGTGGAGT...ATAAGTGCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | GTAAAAGTCATTACCAAGTTTCCTTTCCCCATTAGGAGGGAATGGAATAGTCAGAGGAGAGCCCGGCTCTaGAATGCTACTCTCTGTTCC | + |
Preference number: 4 (lower is better) Translates to: VKVITKFPFPIRREWNSQRRARL*NATLCS Trigger: GGAACAGAGAGTAGCATTTCAGAGCCGGGCTCTCCT...CTGACTATTCCATTCCCTCCTAATGGGGAAAGGAAACTTGGTAATGACTTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR TCA 90 bp | AGGATGCAAAAACTAGGAGAACCTTTGAGCCAAGAAGCACATGCCACGCATGGTAGTCTGTTTCACAGGTaGAAAAGGTCTGGTGATCCT | + |
Preference number: 4 (lower is better) Translates to: RMQKLGEPLSQEAHATHGSLFHR*KRSGDP Trigger: AGGATCACCAGACCTTTTTCACCTGTGAAACAGACT...ACCATGCGTGGCATGTGCTTCTTGGCTCAAAGGTTCTCCTAGTTTTTGCATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | GGCATGTGTGTGAAAGTGAGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCAGTCTGTTTCACAGGTaGAAAAGGTCTGGTGATCCT | + |
Preference number: 4 (lower is better) Translates to: GMCVKVREQLSKLGSLPPSLFHR*KRSGDP Trigger: AGGATCACCAGACCTTTTTCACCTGTGAAACAGACT...GGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCTCACTTTCACACACATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | AGTGAGCTCCAGAACAGCCAGGGCTACACAGAGAAATCTTGCCTCAAAATAAATCCTTCCCATGTACACTaGAGGAGATTCAGAGCACCT | + |
Preference number: 4 (lower is better) Translates to: SELQNSQGYTEKSCLKINPSHVH*RRFRAP Trigger: AGGTGCTCTGAATCTCCTGCAGTGTACATGGGAAGG...ATTTATTTTGAGGCAAGATTTCTCTGTGTAGCCCTGGCTGTTCTGGAGCTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR CCA 90 bp | CTCCCAAGTGCTGGGATTAAAGGCATGCAACACCATGGCCTGGCTCAGAATAAATTGCATTCTGATAGATaGTGGTGTCTGAGGGTTTCA | + |
Preference number: 4 (lower is better) Translates to: LPSAGIKGMQHHGLAQNKLHSDR*WCLRVS Trigger: TGAAACCCTCAGACACCACCATCTATCAGAATGCAA...TTTATTCTGAGCCAGGCCATGGTGTTGCATGCCTTTAATCCCAGCACTTGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CCA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTTCGTTTCCAGTGTTTTaGAACATGAGGATTAAATTC | + |
Preference number: 4 (lower is better) Translates to: SVFRCSCGLALADERCFPSFPVF*NMRIKF Trigger: GAATTTAATCCTCATGTTCCAAAACACTGGAAACGA...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106769.8 |
||
3UTR CAA 72 bp | AGGCTGTTTCTGGAGAGAATTTATCTGAGACGGTTCTaGTTTTCAGTAGTGCTGCTGTGTAGCAGATGGCCG | + |
Preference number: 4 (lower is better) Translates to: RLFLERIYLRRF*FSVVLLCSRWP Trigger: CGGCCATCTGCTACACAGCAGCACTACTGAAAACAAGAACCGTCTCAGATAAATTCTCTCCAGAAACAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183914.8 ENSMUST00000199335.2 |
||
CDS-3UTR GCA 90 bp | AGTGAGCTCCAGAACAGCCAGGGCTACACAGAGAAATCTTGCCTCAAAATAAATACACCAATTTCCTTCTaGAAAGCCCTCCATGTCTCC | + |
Preference number: 4 (lower is better) Translates to: SELQNSQGYTEKSCLKINTPISF*KALHVS Trigger: GGAGACATGGAGGGCTTTGCAGAAGGAAATTGGTGT...ATTTATTTTGAGGCAAGATTTCTCTGTGTAGCCCTGGCTGTTCTGGAGCTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
CDS-3UTR CCA 90 bp | GTTTGCATGATCCTGGGGACACATTCATCATGGCATGTGTGTGAAAGTGAGAGATGCTTTGATTCGAGCTaGAGGATTTCTTTCCCTCCA | + |
Preference number: 4 (lower is better) Translates to: VCMILGTHSSWHVCESERCFDSS*RISFPP Trigger: TGGAGGGAAAGAAATCCTCCAGCTCGAATCAAAGCA...TCTCTCACTTTCACACACATGCCATGATGAATGTGTCCCCAGGATCATGCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CCA 90 bp | CTGACACACAGTCTATACTTAAGGCCAGAACCTGAAAGGGTCAATGAAAGGATGAGAATCTCTGATCTTTaGCACTTGTCCCCGACTGTC | + |
Preference number: 4 (lower is better) Translates to: LTHSLYLRPEPERVNERMRISDL*HLSPTV Trigger: GACAGTCGGGGACAAGTGCCAAAGATCAGAGATTCT...CATCCTTTCATTGACCCTTTCAGGTTCTGGCCTTAAGTATAGACTGTGTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
3UTR CAA 72 bp | AGGGTCAATGAAAGGATGCAAAAACTAGGAGAACCTTaGAGCCAAGAAGCACATGCCACGCATGGTGAAATG | + |
Preference number: 4 (lower is better) Translates to: RVNERMQKLGEP*SQEAHATHGEM Trigger: CATTTCACCATGCGTGGCATGTGCTTCTTGGCTCAAAGGTTCTCCTAGTTTTTGCATCCTTTCATTGACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
3UTR CAA 72 bp | CTTCAGGGAAATACACTATTGACTGCTCCATCTTTGTaGCAGATTGCAGACCTGCTCTATTTCTCCCCCTTC | + |
Preference number: 4 (lower is better) Translates to: LQGNTLLTAPSL*QIADLLYFSPF Trigger: GAAGGGGGAGAAATAGAGCAGGTCTGCAATCTGCAACAAAGATGGAGCAGTCAATAGTGTATTTCCCTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR CAA 72 bp | GAACTTCAGGGAAATACACTATTGACTGCTCCATCTTaGTTGCAGATTGCAGACCTGCTCTATTTCTCCCCC | + |
Preference number: 4 (lower is better) Translates to: ELQGNTLLTAPS*LQIADLLYFSP Trigger: GGGGGAGAAATAGAGCAGGTCTGCAATCTGCAACAAAGATGGAGCAGTCAATAGTGTATTTCCCTGAAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
3UTR CAA 72 bp | ACGAAGACTAGAGAAGATTGCATAACTTACATGAGGTaGCATAGGCGGTGTCAGAGCTGGGATCAGAGCAAA | + |
Preference number: 4 (lower is better) Translates to: TKTREDCITYMR*HRRCQSWDQSK Trigger: TTTGCTCTGATCCCAGCTCTGACACCGCCTATGCAACCTCATGTAAGTTATGCAATCTTCTCTAGTCTTCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR TCA 90 bp | GGCATGTGTGTGAAAGTGAGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTGGAGAGAATTTATCTaGGACGGTTCTTGTTTTCAG | + |
Preference number: 4 (lower is better) Translates to: GMCVKVREQLSKLGSLPPWREFI*DGSCFQ Trigger: CTGAAAACAAGAACCGTCTCAGATAAATTCTCTCCA...GGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCTCACTTTCACACACATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR TCA 90 bp | AGTGAGCTCCAGAACAGCCAGGGCTACACAGAGAAATCTTGCCTCAAAATAAATACTTCAGGAAACTGGTaGGTGAGAAACGCTAGCATT | + |
Preference number: 4 (lower is better) Translates to: SELQNSQGYTEKSCLKINTSGNW*VRNASI Trigger: AATGCTAGCGTTTCTCACTCACCAGTTTCCTGAAGT...ATTTATTTTGAGGCAAGATTTCTCTGTGTAGCCCTGGCTGTTCTGGAGCTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR CCA 90 bp | AAGAAGCACATGCCACGCATGGTGAAATGTCCCTCCTGTGCCTTCTATGCACTTGATGTACCATGCTTATaGAAGTACCACCATTCAAAT | + |
Preference number: 4 (lower is better) Translates to: KKHMPRMVKCPSCAFYALDVPCL*KYHHSN Trigger: ATTTGAATGGTGGTACTTCCATAAGCATGGTACATC...AAGTGCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR CCA 90 bp | CTGACACACAGTCTATACTTAAGGCCAGAACCTGAAAGGGTCAATGAAAGGATGGTAGGACGTAGGCAGTaGCACAGTCATTGTTTAACT | + |
Preference number: 4 (lower is better) Translates to: LTHSLYLRPEPERVNERMVGRRQ*HSHCLT Trigger: AGTTAAACAATGACTGTGCCACTGCCTACGTCCTAC...CATCCTTTCATTGACCCTTTCAGGTTCTGGCCTTAAGTATAGACTGTGTGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CCA 90 bp | GGCATGTGTGTGAAAGTGAGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTATACACAAGTACATTaGTATCTCGCCTCAGTTGAG | + |
Preference number: 4 (lower is better) Translates to: GMCVKVREQLSKLGSLPPYTQVH*YLASVE Trigger: CTCAACTGAGGCGAGATACCAATGTACTTGTGTATA...GGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCTCACTTTCACACACATGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR GCA 90 bp | GAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTTATATGAGTTCGAACTTACTCTCCTGCCCTGAGTaGCTGTTTAAACAACCTTTC | + |
Preference number: 4 (lower is better) Translates to: ENNFLNLALSHPYMSSNLLSCPE*LFKQPF Trigger: GAAAGGTTGTTTAAACAGGCACTCAGGGCAGGAGAG...TAAGTTCGAACTCATATAAGGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR GCA 90 bp | GCTTCGCTATCTCCTCGCTTCAGAATGTGTTCTGGAGGTAAGATTAAACTTTTCAAACCCACTGGAGCATaGAACACCAATTTCCTTCTG | + |
Preference number: 4 (lower is better) Translates to: ASLSPRFRMCSGGKIKLFKPTGA*NTNFLL Trigger: CAGAAGGAAATTGGTGTTGCATGCTCCAGTGGGTTT...GAAAAGTTTAATCTTACCTCCAGAACACATTCTGAAGCGAGGAGATAGCGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
CDS-3UTR CCA 90 bp | GTTTGCATGATCCTGGGGACACATTCATCATGGCATGTGTGTGAAAGTGAGAGAGTGCCACATAGAACTTaGGTGTCAGTGAACTTAAAA | + |
Preference number: 4 (lower is better) Translates to: VCMILGTHSSWHVCESERVPHRT*VSVNLK Trigger: TTTTAAGTTCACTGACACCCAAGTTCTATGTGGCAC...TCTCTCACTTTCACACACATGCCATGATGAATGTGTCCCCAGGATCATGCAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
3UTR CAA 72 bp | CAACACATCTGCAAGGCACAAAATAGACTAGTTCTTTaGGGTTCTGTTGTTGTTGACCCCCTCACATCTCAA | + |
Preference number: 4 (lower is better) Translates to: QHICKAQNRLVL*GSVVVDPLTSQ Trigger: TTGAGATGTGAGGGGGTCAACAACAACAGAACCCAAAAGAACTAGTCTATTTTGTGCCTTGCAGATGTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR TCA 90 bp | GTAAAAGTCATTACCAAGTTTCCTTTCCCCATTAGGAGGGAATGGAATAGTCAGACTTCAGGAAACTGGTaGGTGAGAAACGCTAGCATT | + |
Preference number: 4 (lower is better) Translates to: VKVITKFPFPIRREWNSQTSGNW*VRNASI Trigger: AATGCTAGCGTTTCTCACTCACCAGTTTCCTGAAGT...CTGACTATTCCATTCCCTCCTAATGGGGAAAGGAAACTTGGTAATGACTTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR GCA 90 bp | GTAAAAGTCATTACCAAGTTTCCTTTCCCCATTAGGAGGGAATGGAATAGTCAGGAAAGCATAGGCAATTaGTTCGCTATCTCCTCGCTT | + |
Preference number: 4 (lower is better) Translates to: VKVITKFPFPIRREWNSQESIGN*FAISSL Trigger: AAGCGAGGAGATAGCGAAGCAATTGCCTATGCTTTC...CTGACTATTCCATTCCCTCCTAATGGGGAAAGGAAACTTGGTAATGACTTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR GCA 90 bp | AGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTTATATGAGTTCGAACTTTATCAGCAGTCTCTGTaGAGCTGGGATAAGGGTAAA | + |
Preference number: 4 (lower is better) Translates to: REQLSKLGSLPPLYEFELYQQSL*SWDKGK Trigger: TTTACCCTTATCCCAGCTGCACAGAGACTGCTGATA...AAGTTCGAACTCATATAAGGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR GCA 90 bp | AGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTTATATGAGTTCGAACTTATTTCTTTCCCTCCATaGCTTCTGCATAACTGTGTC | + |
Preference number: 4 (lower is better) Translates to: REQLSKLGSLPPLYEFELISFPP*LLHNCV Trigger: GACACAGTTATGCAGAAGGCATGGAGGGAAAGAAAT...AAGTTCGAACTCATATAAGGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CCA 90 bp | AGTGAGCTCCAGAACAGCCAGGGCTACACAGAGAAATCTTGCCTCAAAATAAATGATGTACCATGCTTATaGAAGTACCACCATTCAAAT | + |
Preference number: 4 (lower is better) Translates to: SELQNSQGYTEKSCLKINDVPCL*KYHHSN Trigger: ATTTGAATGGTGGTACTTCCATAAGCATGGTACATC...ATTTATTTTGAGGCAAGATTTCTCTGTGTAGCCCTGGCTGTTCTGGAGCTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS GCA 90 bp | CTCTTTCCAGCCCAGCGGCGGGCCCAGGCCCAAGCCAGGAACAGGTaGATGGGGACACCCCACGGCCCGCGCGGCTTCCGCGAAGTAGTC | + |
Preference number: 5 (lower is better) Translates to: LFPAQRRAQAQARNR*MGTPHGPRGFREVV Trigger: GACTACTTCGCGGAAGCCGCGCGGGCCGTGGGGTGTCCCCATGCACCTGTTCCTGGCTTGGGCCTGGGCCCGCCGCTGGGCTGGAAAGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000123876.6 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
CDS CCA 90 bp | CCCTCAGAGCGTAAAGCAGCCCCAGCCCCGCCAGGAACCACAGCGTaGACCCAGAGTTCGCCAACCCGGCCTTCAGCCGCTCTTTCCAGC | + |
Preference number: 5 (lower is better) Translates to: PSERKAAPAPPGTTA*TQSSPTRPSAALSS Trigger: GCTGGAAAGAGCGGCTGAAGGCCGGGTTGGCGAACTCTGGGTCCACGCTGTGGTTCCTGGCGGGGCTGGGGCTGCTTTACGCTCTGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000123876.6 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
CDS CCA 90 bp | AGAATCTCTGATCTTTGGCACTTGTCCCCGACTGTCCGGGAGGTTTaGGCCTCTCACCCGCTGTCACGTTGTCACACAGCCTCAGCGGGA | + |
Preference number: 5 (lower is better) Translates to: RISDLWHLSPTVREV*ASHPLSRCHTASAG Trigger: TCCCGCTGAGGCTGTGTGACAACGTGACAGCGGGTGAGAGGCCCAAACCTCCCGGACAGTCGGGGACAAGTGCCAAAGATCAGAGATTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
CDS-3UTR CAA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGGGTATCTCGCCTCAGTaGAGCTTCATGCTGAGGGCT | + |
Preference number: 5 (lower is better) Translates to: VFRCSCGLALADERCFPAGISPQ*SFMLRA Trigger: AGCCCTCAGCATGAAGCTCAACTGAGGCGAGATACC...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 |
||
CDS-3UTR CAA 90 bp | GGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCCTGGTGTTCCAATTCTCACTTTCTCTGCTGTaGGCAGGAGAGCCCGGCTCT | + |
Preference number: 5 (lower is better) Translates to: GSHFSSPIRQHAILVFQFSLSLL*AGEPGS Trigger: AGAGCCGGGCTCTCCTGCCAACAGCAGAGAAAGTGA...GAATTGGAACACCAGGATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CAA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTTCACTTTCTCTGCTGTaGGCAGGAGAGCCCGGCTCT | + |
Preference number: 5 (lower is better) Translates to: SVFRCSCGLALADERCFPSLSLL*AGEPGS Trigger: AGAGCCGGGCTCTCCTGCCAACAGCAGAGAAAGTGA...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR CAA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGGGGTTTCTCCAGACCTaGCATTCTGATAGATGGTGG | + |
Preference number: 5 (lower is better) Translates to: VFRCSCGLALADERCFPAGFLQT*HSDRWW Trigger: CCACCATCTATCAGAATGCAAGGTCTGGAGAAACCC...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR CAA 90 bp | GGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCCTGGTGTTCCAATTCGGGTTTCTCCAGACCTaGCATTCTGATAGATGGTGG | + |
Preference number: 5 (lower is better) Translates to: GSHFSSPIRQHAILVFQFGFLQT*HSDRWW Trigger: CCACCATCTATCAGAATGCAAGGTCTGGAGAAACCC...GAATTGGAACACCAGGATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CAA 90 bp | GTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTGCGTATCTGAGACGGTTCTaGTTTTCAGTAGTGCTGCTG | + |
Preference number: 5 (lower is better) Translates to: VFRCSCGLALADERCFPAYLRRF*FSVVLL Trigger: CAGCAGCACTACTGAAAACAAGAACCGTCTCAGATA...CGCAGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR CAA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTCAGCATCTACAATGGTaGTTGCTTCTTCTTCGGCCA | + |
Preference number: 5 (lower is better) Translates to: SVFRCSCGLALADERCFPQHLQW*LLLLRP Trigger: TGGCCGAAGAAGAAGCAACAACCATTGTAGATGCTG...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 |
||
CDS-3UTR CAA 90 bp | CTCCCAAGTGCTGGGATTAAAGGCATGCAACACCATGGCCTGGCTCAGAATAAAGGTATCTCGCCTCAGTaGAGCTTCATGCTGAGGGCT | + |
Preference number: 5 (lower is better) Translates to: LPSAGIKGMQHHGLAQNKGISPQ*SFMLRA Trigger: AGCCCTCAGCATGAAGCTCAACTGAGGCGAGATACC...TTTATTCTGAGCCAGGCCATGGTGTTGCATGCCTTTAATCCCAGCACTTGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CAA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTCATCTACAATGGTTGTaGCTTCTTCTTCGGCCAGTA | + |
Preference number: 5 (lower is better) Translates to: SVFRCSCGLALADERCFPHLQWL*LLLRPV Trigger: TACTGGCCGAAGAAGAAGCAACAACCATTGTAGATG...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 |
||
CDS-3UTR CAA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTAGATGGCCGCTGACTTaGGAAGGCTTATATCATCAT | + |
Preference number: 5 (lower is better) Translates to: SVFRCSCGLALADERCFPRWPLT*EGLYHH Trigger: ATGATGATATAAGCCTTCCAAAGTCAGCGGCCATCT...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR CAA 90 bp | AGCCAAGAAGCACATGCCACGCATGGTGAAATGTCCCTCCTGTGCCTTCTATGCAGAAAGCATAGGCAATaGCTTCGCTATCTCCTCGCT | + |
Preference number: 5 (lower is better) Translates to: SQEAHATHGEMSLLCLLCRKHRQ*LRYLLA Trigger: AGCGAGGAGATAGCGAAGCAATTGCCTATGCTTTCT...GCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTCTTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR CAA 90 bp | CTCGCTTCAGAATGTGTTCTGGAGGTAAGATTAAACTTTTCATCTCTAGTAAGTGACTGTCCGGGAGGTTaGGGCCTCTCACCCGCTGTC | + |
Preference number: 5 (lower is better) Translates to: LASECVLEVRLNFSSLVSDCPGG*GLSPAV Trigger: GACAGCGGGTGAGAGGCCCAAACCTCCCGGACAGTC...ACTTACTAGAGATGAAAAGTTTAATCTTACCTCCAGAACACATTCTGAAGCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
CDS-3UTR CAA 90 bp | ATAAGCACTCTGCAGGGCAGCCACTTCTCCAGCCCGATAAGGCAGCATGCTATCATGGCTTATGGACACTaGTTCAATAAAAGATGTACC | + |
Preference number: 5 (lower is better) Translates to: ISTLQGSHFSSPIRQHAIMAYGH*FNKRCT Trigger: GGTACATCTTTTATTGAACAAGTGTCCATAAGCCAT...GATAGCATGCTGCCTTATCGGGCTGGAGAAGTGGCTGCCCTGCAGAGTGCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CAA 90 bp | AGTGTCTTCCGCTGCTCGTGCGGGTTAGCACTGGCAGATGAGAGATGCTTTCCTATGGCTTATGGACACTaGTTCAATAAAAGATGTACC | + |
Preference number: 5 (lower is better) Translates to: SVFRCSCGLALADERCFPMAYGH*FNKRCT Trigger: GGTACATCTTTTATTGAACAAGTGTCCATAAGCCAT...AGGAAAGCATCTCTCATCTGCCAGTGCTAACCCGCACGAGCAGCGGAAGACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000200132.5 |
||
CDS-3UTR CAA 90 bp | CCATCTTTGTTGCAGATTGCAGACCTGCTCTATTTCTCCCCCTTCCTACTCCATCAGCATCTACAATGGTaGTTGCTTCTTCTTCGGCCA | + |
Preference number: 5 (lower is better) Translates to: PSLLQIADLLYFSPFLLHQHLQW*LLLLRP Trigger: TGGCCGAAGAAGAAGCAACAACCATTGTAGATGCTG...ATGGAGTAGGAAGGGGGAGAAATAGAGCAGGTCTGCAATCTGCAACAAAGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CAA 90 bp | AAGAAGCACATGCCACGCATGGTGAAATGTCCCTCCTGTGCCTTCTATGCACTTAGATGGCCGCTGACTTaGGAAGGCTTATATCATCAT | + |
Preference number: 5 (lower is better) Translates to: KKHMPRMVKCPSCAFYALRWPLT*EGLYHH Trigger: ATGATGATATAAGCCTTCCAAAGTCAGCGGCCATCT...AAGTGCATAGAAGGCACAGGAGGGACATTTCACCATGCGTGGCATGTGCTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR CAA 90 bp | GGCATGTGTGTGAAAGTGAGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCCATCTACAATGGTTGTaGCTTCTTCTTCGGCCAGTA | + |
Preference number: 5 (lower is better) Translates to: GMCVKVREQLSKLGSLPPHLQWL*LLLRPV Trigger: TACTGGCCGAAGAAGAAGCAACAACCATTGTAGATG...GGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCTCACTTTCACACACATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059271.13 |
||
CDS-3UTR CAA 90 bp | AGGATGCAAAAACTAGGAGAACCTTTGAGCCAAGAAGCACATGCCACGCATGGTTATCTGAGACGGTTCTaGTTTTCAGTAGTGCTGCTG | + |
Preference number: 5 (lower is better) Translates to: RMQKLGEPLSQEAHATHGYLRRF*FSVVLL Trigger: CAGCAGCACTACTGAAAACAAGAACCGTCTCAGATA...ACCATGCGTGGCATGTGCTTCTTGGCTCAAAGGTTCTCCTAGTTTTTGCATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR CAA 90 bp | GTTTGCATGATCCTGGGGACACATTCATCATGGCATGTGTGTGAAAGTGAGAGAAGATGGCCGCTGACTTaGGAAGGCTTATATCATCAT | + |
Preference number: 5 (lower is better) Translates to: VCMILGTHSSWHVCESERRWPLT*EGLYHH Trigger: ATGATGATATAAGCCTTCCAAAGTCAGCGGCCATCT...TCTCTCACTTTCACACACATGCCATGATGAATGTGTCCCCAGGATCATGCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR CAA 90 bp | AGTGAGCTCCAGAACAGCCAGGGCTACACAGAGAAATCTTGCCTCAAAATAAATTATCTGAGACGGTTCTaGTTTTCAGTAGTGCTGCTG | + |
Preference number: 5 (lower is better) Translates to: SELQNSQGYTEKSCLKINYLRRF*FSVVLL Trigger: CAGCAGCACTACTGAAAACAAGAACCGTCTCAGATA...ATTTATTTTGAGGCAAGATTTCTCTGTGTAGCCCTGGCTGTTCTGGAGCTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS TCA 90 bp | AACTCCAAACTGTGTCTGAAGGACGTAAAAAGTCTGTTTCACAGGTaGAAAAGGTCTGGTGATCCTTCTGTATTCTGCTCCTCTGAAGAG | + |
Preference number: 5 (lower is better) Translates to: NSKLCLKDVKSLFHR*KRSGDPSVFCSSEE Trigger: CTCTTCAGAGGAGCAGAATACAGAAGGATCACCAGACCTTTTTCACCTGTGAAACAGACTTTTTACGTCCTTCAGACACAGTTTGGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123876.6 |
||
CDS-3UTR CAA 90 bp | AGAGAACAACTTTCTAAACTTGGCTCTCTCCCACCCTTATATGAGTTCGAACTTAGAAAGCATAGGCAATaGCTTCGCTATCTCCTCGCT | + |
Preference number: 5 (lower is better) Translates to: REQLSKLGSLPPLYEFELRKHRQ*LRYLLA Trigger: AGCGAGGAGATAGCGAAGCAATTGCCTATGCTTTCT...AAGTTCGAACTCATATAAGGGTGGGAGAGAGCCAAGTTTAGAAAGTTGTTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS-3UTR CAA 90 bp | AGTGAGCTCCAGAACAGCCAGGGCTACACAGAGAAATCTTGCCTCAAAATAAATATGGCTTATGGACACTaGTTCAATAAAAGATGTACC | + |
Preference number: 5 (lower is better) Translates to: SELQNSQGYTEKSCLKINMAYGH*FNKRCT Trigger: GGTACATCTTTTATTGAACAAGTGTCCATAAGCCAT...ATTTATTTTGAGGCAAGATTTCTCTGTGTAGCCCTGGCTGTTCTGGAGCTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059271.13 ENSMUST00000200132.5 |
||
CDS CCA 72 bp | CGTAAAGCAGCCCCAGCCCCGCCAGGAACCACAGCGTaGACCCAGAGTTCGCCAACCCGGCCTTCAGCCGCT | + |
Preference number: 6 (lower is better) Translates to: RKAAPAPPGTTA*TQSSPTRPSAA Trigger: AGCGGCTGAAGGCCGGGTTGGCGAACTCTGGGTCCACGCTGTGGTTCCTGGCGGGGCTGGGGCTGCTTTACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059271.13 ENSMUST00000106769.8 ENSMUST00000123876.6 ENSMUST00000183914.8 ENSMUST00000200132.5 |
||
CDS CCA 72 bp | GATCTTTGGCACTTGTCCCCGACTGTCCGGGAGGTTTaGGCCTCTCACCCGCTGTCACGTTGTCACACAGCC | + |
Preference number: 6 (lower is better) Translates to: DLWHLSPTVREV*ASHPLSRCHTA Trigger: GGCTGTGTGACAACGTGACAGCGGGTGAGAGGCCCAAACCTCCCGGACAGTCGGGGACAAGTGCCAAAGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
CDS CAA 90 bp | TGCAAAGCCCTCCATGTCTCCCCGAGAATCTCTGATCTTTGGCACTaGTCCCCGACTGTCCGGGAGGTTTGGGCCTCTCACCCGCTGTCA | + |
Preference number: 6 (lower is better) Translates to: CKALHVSPRISDLWH*SPTVREVWASHPLS Trigger: TGACAGCGGGTGAGAGGCCCAAACCTCCCGGACAGTCGGGGACAAGTGCCAAAGATCAGAGATTCTCGGGGAGACATGGAGGGCTTTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
CDS GCA 72 bp | GGTGGCCCAAGCGACAAAAATAAACCCACTGGAGCATaGAACACCAATTTCCTTCTGCAAAGCCCTCCATGT | + |
Preference number: 6 (lower is better) Translates to: GGPSDKNKPTGA*NTNFLLQSPPC Trigger: ACATGGAGGGCTTTGCAGAAGGAAATTGGTGTTGCATGCTCCAGTGGGTTTATTTTTGTCGCTTGGGCCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
CDS GCA 72 bp | ATAAACCCACTGGAGCATGCAACACCAATTTCCTTCTaGAAAGCCCTCCATGTCTCCCCGAGAATCTCTGAT | + |
Preference number: 6 (lower is better) Translates to: INPLEHATPISF*KALHVSPRISD Trigger: ATCAGAGATTCTCGGGGAGACATGGAGGGCTTTGCAGAAGGAAATTGGTGTTGCATGCTCCAGTGGGTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183914.8 |
||
CDS TCA 72 bp | CTGTGTCTGAAGGACGTAAAAAGTCTGTTTCACAGGTaGAAAAGGTCTGGTGATCCTTCTGTATTCTGCTCC | + |
Preference number: 6 (lower is better) Translates to: LCLKDVKSLFHR*KRSGDPSVFCS Trigger: GGAGCAGAATACAGAAGGATCACCAGACCTTTTTCACCTGTGAAACAGACTTTTTACGTCCTTCAGACACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123876.6 |