Pregenerated sensors for ST6GALNAC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079442Ensembl transcript IDs: ENSMUST00000102818.11, ENSMUST00000146557.2, ENSMUST00000179989.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTCTTCCTCACCCCGAGTCCTCCCAGGCCCCGCTCTGTGCCTGTTaGGTGAGGGCAGGGTGGCTGTCCTGGGCCAGCACAGTCCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: FLPHPESSQAPLCAC*VRAGWLSWASTVLW Trigger: CCACAGGACTGTGCTGGCCCAGGACAGCCACCCTGCCCTCACTCAACAGGCACAGAGCGGGGCCTGGGAGGACTCGGGGTGAGGAAGAAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR CCA 90 bp | TCAGGCCTGATGCCAGGACCCTTCGTCTCACCCACGACCCACTCATaGCCTATCCCTACACTCAGCCCCTCAGCCCCTCCAGGCCTGCGG | + |
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Preference number: 1 (lower is better) Translates to: SGLMPGPFVSPTTHS*PIPTLSPSAPPGLR Trigger: CCGCAGGCCTGGAGGGGCTGAGGGGCTGAGTGTAGGGATAGGCCATGAGTGGGTCGTGGGTGAGACGAAGGGTCCTGGCATCAGGCCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR CCA 90 bp | CCCTACACTCAGCCCCTCAGCCCCTCCAGGCCTGCGGAAACGGTTTaGCTTCCCGCCTGTAACCCTGGCTCAGAGATTTCCCTCTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: PYTQPLSPSRPAETV*LPACNPGSEISLSA Trigger: AGCAGAGAGGGAAATCTCTGAGCCAGGGTTACAGGCGGGAAGCCAAACCGTTTCCGCAGGCCTGGAGGGGCTGAGGGGCTGAGTGTAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR TCA 90 bp | GGACTCTGGGGACCGCGCAGGTTACACCCAGAGGGTCCCGAACTCTaGAGCAGAGAGCTAAAGCCCAGGGTGCCATTCTTCAGTCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: GLWGPRRLHPEGPEL*SRELKPRVPFFSLP Trigger: TGGAAGACTGAAGAATGGCACCCTGGGCTTTAGCTCTCTGCTTCAGAGTTCGGGACCCTCTGGGTGTAACCTGCGCGGTCCCCAGAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR TCA 90 bp | CAGGGCCAGAATCATGGTGAACCAACCGGTGCTGAGAAAGGAGCCTaGTTGTCTCCTGGGCTTGTTCGGTCTGGCTGCCCGAGCAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: QGQNHGEPTGAEKGA*LSPGLVRSGCPSRG Trigger: TCCTCTGCTCGGGCAGCCAGACCGAACAAGCCCAGGAGACAATCAGGCTCCTTTCTCAGCACCGGTTGGTTCACCATGATTCTGGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146557.2 |
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| 3UTR CCA 90 bp | AGACAATGCGGGAAGAGCAGGACAGTTGTGGGCCTAGAGAAGGGCTaGAAGGCTCAGTCAGCCCTCCAGGGAACAGGCTACAGGCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: RQCGKSRTVVGLEKG*KAQSALQGTGYRPC Trigger: ACAAGGCCTGTAGCCTGTTCCCTGGAGGGCTGACTGAGCCTTCCAGCCCTTCTCTAGGCCCACAACTGTCCTGCTCTTCCCGCATTGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR CCA 90 bp | GGGCCAGCACAGTCCTGTGGTCAGACCATCAGAAGGTCAGGCTTGTaGGATGCTGGGGCAGGAGACTGTAGGGCTGATGTCCAGACAATG | + |
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Preference number: 1 (lower is better) Translates to: GPAQSCGQTIRRSGL*DAGAGDCRADVQTM Trigger: CATTGTCTGGACATCAGCCCTACAGTCTCCTGCCCCAGCATCCCACAAGCCTGACCTTCTGATGGTCTGACCACAGGACTGTGCTGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR TCA 90 bp | CATCAAATCCCAAGTTCCAGGGTGCACCAACCAGGGCCACCAGCCTaGGAATGTGGCACCATGTGGCTGGAGCCAGGTAGAGGAAAGGTT | + |
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Preference number: 1 (lower is better) Translates to: HQIPSSRVHQPGPPA*ECGTMWLEPGRGKV Trigger: AACCTTTCCTCTACCTGGCTCCAGCCACATGGTGCCACATTCTCAGGCTGGTGGCCCTGGTTGGTGCACCCTGGAACTTGGGATTTGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR CCA 90 bp | AGGGTGCCATTCTTCAGTCTTCCAAAGGGGGAAGGAGGCAGAGCCTaGGTAGTGAGCTCTCAAGGCTGCCAGCATCCTAGTTCAGACACC | + |
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Preference number: 1 (lower is better) Translates to: RVPFFSLPKGEGGRA*VVSSQGCQHPSSDT Trigger: GGTGTCTGAACTAGGATGCTGGCAGCCTTGAGAGCTCACTACCCAGGCTCTGCCTCCTTCCCCCTTTGGAAGACTGAAGAATGGCACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR TCA 90 bp | CAGGATCAGTCAGGCAGAGGGCCACCCTATTTAAATGGTGGCTTCTaGATACTGAGAGCCAAGTGTGTTCTAAGTAAGCCCCAAGGGGCA | + |
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Preference number: 1 (lower is better) Translates to: QDQSGRGPPYLNGGF*ILRAKCVLSKPQGA Trigger: TGCCCCTTGGGGCTTACTTAGAACACACTTGGCTCTCAGTATTCAGAAGCCACCATTTAAATAGGGTGGCCCTCTGCCTGACTGATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR CCA 90 bp | CCAGAAGCCAGGACAGAAGCATCTCTGTGTGCCTTGTCTAAGGGTTaGGTCAGCATTTCCTTATGGCTGAAAGCAGGAAGACTGACTCTC | + |
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Preference number: 1 (lower is better) Translates to: PEARTEASLCALSKG*VSISLWLKAGRLTL Trigger: GAGAGTCAGTCTTCCTGCTTTCAGCCATAAGGAAATGCTGACCCAACCCTTAGACAAGGCACACAGAGATGCTTCTGTCCTGGCTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
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| 3UTR TCA 90 bp | GTCCCACAGTTAAGAGACAGCCTGACTGGCAAAGACTTTGGAATCTaGCTCATGAGGCAGGAAAGTGGCGTTGGGTGGAATTTCTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: VPQLRDSLTGKDFGI*LMRQESGVGWNFFL Trigger: GAGGAAGAAATTCCACCCAACGCCACTTTCCTGCCTCATGAGTCAGATTCCAAAGTCTTTGCCAGTCAGGCTGTCTCTTAACTGTGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR TCA 90 bp | TGGTGTAAATGGCATCTTCTCGACTCCTCTTCAAGTCACAAGGCCTaGGGTTCCTCCGAGTGTACCCAGTGTTGGGTAATAGAGACTTCA | + |
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Preference number: 1 (lower is better) Translates to: WCKWHLLDSSSSHKA*GSSECTQCWVIETS Trigger: TGAAGTCTCTATTACCCAACACTGGGTACACTCGGAGGAACCTCAGGCCTTGTGACTTGAAGAGGAGTCGAGAAGATGCCATTTACACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR TCA 90 bp | TTGGGTAATAGAGACTTCATGTTCTACCTGGTGTCAGGTAGAAGGTaGGTCATAAATGCTCACATTAGAGCCGTGTTGGCCTGGAATGGG | + |
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Preference number: 1 (lower is better) Translates to: LGNRDFMFYLVSGRR*VINAHIRAVLAWNG Trigger: CCCATTCCAGGCCAACACGGCTCTAATGTGAGCATTTATGACTCACCTTCTACCTGACACCAGGTAGAACATGAAGTCTCTATTACCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR GCA 90 bp | ATTCTCATTAGGATGAGAACATCATCATTATTATTATTATTATTTTaGACTGATGCCACCTATGCCAGGGTGGAACAGGATCAGTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: ILIRMRTSSLLLLLF*TDATYARVEQDQSG Trigger: GCCTGACTGATCCTGTTCCACCCTGGCATAGGTGGCATCAGTGCAAAATAATAATAATAATAATGATGATGTTCTCATCCTAATGAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
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| 3UTR-3UTR TCA 90 bp | CACCTGGCACTGGACAGGGACAAGGGCAGTGTTGTGGGCCAGGTGCCAGGTCTCCCGCTCTGTGCCTGTTaGGTGAGGGCAGGGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: HLALDRDKGSVVGQVPGLPLCAC*VRAGWL Trigger: CAGCCACCCTGCCCTCACTCAACAGGCACAGAGCGG...GAGACCTGGCACCTGGCCCACAACACTGCCCTTGTCCCTGTCCAGTGCCAGGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAACCAGGGCCACCAGCCTGAGAATGTGGCACCATGTGGCTGGAGCCAGGTAGGTCACAGGCCTGGCTaGGGCCTGGCAGTCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: TNQGHQPENVAPCGWSQVGHRPG*GLAVTG Trigger: GCCAGTGACTGCCAGGCCTCAGCCAGGCCTGTGACC...TACCTGGCTCCAGCCACATGGTGCCACATTCTCAGGCTGGTGGCCCTGGTTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCCCCTCAGCCCCTCCAGGCCTGCGGAAACGGTTTGGCTTCCCGCCTGTAGAAGGAGGCAGAGCCTaGGTAGTGAGCTCTCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSPSAPPGLRKRFGFPPVEGGRA*VVSSQG Trigger: GCCTTGAGAGCTCACTACCCAGGCTCTGCCTCCTTC...TACAGGCGGGAAGCCAAACCGTTTCCGCAGGCCTGGAGGGGCTGAGGGGCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | CACCTGGCACTGGACAGGGACAAGGGCAGTGTTGTGGGCCAGGTGCCAGGTCTCGTGGCACCATGTGGCTaGAGCCAGGTAGAGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: HLALDRDKGSVVGQVPGLVAPCG*SQVEER Trigger: CCTTTCCTCTACCTGGCTCCAGCCACATGGTGCCAC...GAGACCTGGCACCTGGCCCACAACACTGCCCTTGTCCCTGTCCAGTGCCAGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGACCAGGGAGTCTCTTGACCCTGGACATGCACGGAGAAGGGCACAGGTGACATGGGGTCAGGCCTaGTGCCAGGACCCTTCGTCT | + |
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Preference number: 2 (lower is better) Translates to: TRTRESLDPGHARRRAQVTWGQA*CQDPSS Trigger: AGACGAAGGGTCCTGGCATCAGGCCTGACCCCATGT...CACCTGTGCCCTTCTCCGTGCATGTCCAGGGTCAAGAGACTCCCTGGTCCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGAAAGCTAGCCTGGGCTATATCATCTGTAATGAGCACCAGCTCCCTCCGGGTCACAGGCCTGGCTaGGGCCTGGCAGTCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: LLKASLGYIICNEHQLPPGHRPG*GLAVTG Trigger: GCCAGTGACTGCCAGGCCTCAGCCAGGCCTGTGACC...CGGAGGGAGCTGGTGCTCATTACAGATGATATAGCCCAGGCTAGCTTTCAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGTCTCTAGTCACTCCTGGGAAAATGGGTAGGAGGGAGAGTGGGCTAGGCTCTGTGCCTGTTGAGTaGGGGCAGGGTGGCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: ARSLVTPGKMGRRESGLGSVPVE*GQGGCP Trigger: AGGACAGCCACCCTGCCCTCACTCAACAGGCACAGA...GCCTAGCCCACTCTCCCTCCTACCCATTTTCCCAGGAGTGACTAGAGACCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAGGTCTCTAGTCACTCCTGGGAAAATGGGTAGGAGGGAGAGTGGGCTAGGCTCCCAAGTTCCAGGGTaGACCAACCAGGGCCACCAG | + |
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Preference number: 2 (lower is better) Translates to: ARSLVTPGKMGRRESGLGSQVPG*TNQGHQ Trigger: CTGGTGGCCCTGGTTGGTGCACCCTGGAACTTGGGA...GCCTAGCCCACTCTCCCTCCTACCCATTTTCCCAGGAGTGACTAGAGACCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | GCTAGCCTGGGCTATATCATCTGTAATGAGCACCAGCTCCCTCCGCAGGGTGGCAATGGGTCACAGGCCTaGCTGAGGCCTGGCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: ASLGYIICNEHQLPPQGGNGSQA*LRPGSH Trigger: GTGACTGCCAGGCCTCAGCCAGGCCTGTGACCCATT...GCCACCCTGCGGAGGGAGCTGGTGCTCATTACAGATGATATAGCCCAGGCTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCTCACATCCATCAAATCCCAAGTTCCAGGGTGCACCAACCAGGGCCACCAGAGAGCCGTGTTGGCCTaGAATGGGTCACAGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ALTSIKSQVPGCTNQGHQRAVLA*NGSQAW Trigger: CCAGGCCTGTGACCCATTCCAGGCCAACACGGCTCT...CTGGTGGCCCTGGTTGGTGCACCCTGGAACTTGGGATTTGATGGATGTGAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAAGCCCAGGGTGCCATTCTTCAGTCTTCCAAAGGGGGAAGGAGGCAGAGCCGAGACCACTCCTTTCTaGTCAGCACCCTCCCCGCGC | + |
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Preference number: 2 (lower is better) Translates to: LKPRVPFFSLPKGEGGRAETTPF*SAPSPR Trigger: GCGCGGGGAGGGTGCTGACCAGAAAGGAGTGGTCTC...GGCTCTGCCTCCTTCCCCCTTTGGAAGACTGAAGAATGGCACCCTGGGCTTTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAAGCCCAGGGTGCCATTCTTCAGTCTTCCAAAGGGGGAAGGAGGCAGAGCCTCTGTGCCTGTTGAGTaGGGGCAGGGTGGCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LKPRVPFFSLPKGEGGRASVPVE*GQGGCP Trigger: AGGACAGCCACCCTGCCCTCACTCAACAGGCACAGA...GGCTCTGCCTCCTTCCCCCTTTGGAAGACTGAAGAATGGCACCCTGGGCTTTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAGGGTCCCGAACTCTGAAGCAGAGAGCTAAAGCCCAGGGTGCCATTCTTAATGGGTCACAGGCCTaGCTGAGGCCTGGCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: PRGSRTLKQRAKAQGAILNGSQA*LRPGSH Trigger: GTGACTGCCAGGCCTCAGCCAGGCCTGTGACCCATT...AAGAATGGCACCCTGGGCTTTAGCTCTCTGCTTCAGAGTTCGGGACCCTCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | CACCTGGCACTGGACAGGGACAAGGGCAGTGTTGTGGGCCAGGTGCCAGGTCTCCAGGGGTGGTGTAAATaGCATCTTCTCGACTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: HLALDRDKGSVVGQVPGLQGWCK*HLLDSS Trigger: AGAGGAGTCGAGAAGATGCCATTTACACCACCCCTG...GAGACCTGGCACCTGGCCCACAACACTGCCCTTGTCCCTGTCCAGTGCCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGTCTCTAGTCACTCCTGGGAAAATGGGTAGGAGGGAGAGTGGGCTAGGCGTGGCACCATGTGGCTaGAGCCAGGTAGAGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: ARSLVTPGKMGRRESGLGVAPCG*SQVEER Trigger: CCTTTCCTCTACCTGGCTCCAGCCACATGGTGCCAC...GCCTAGCCCACTCTCCCTCCTACCCATTTTCCCAGGAGTGACTAGAGACCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGTCTCTAGTCACTCCTGGGAAAATGGGTAGGAGGGAGAGTGGGCTAGGCAGAAGGTCAGGCTTGTaGGATGCTGGGGCAGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: ARSLVTPGKMGRRESGLGRRSGL*DAGAGD Trigger: GTCTCCTGCCCCAGCATCCCACAAGCCTGACCTTCT...GCCTAGCCCACTCTCCCTCCTACCCATTTTCCCAGGAGTGACTAGAGACCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCCCCTCAGCCCCTCCAGGCCTGCGGAAACGGTTTGGCTTCCCGCCTGTAAAGAGACAGCCTGACTaGCAAAGACTTTGGAATCTG | + |
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Preference number: 2 (lower is better) Translates to: LSPSAPPGLRKRFGFPPVKRQPD*QRLWNL Trigger: CAGATTCCAAAGTCTTTGCCAGTCAGGCTGTCTCTT...TACAGGCGGGAAGCCAAACCGTTTCCGCAGGCCTGGAGGGGCTGAGGGGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGAAAGCTAGCCTGGGCTATATCATCTGTAATGAGCACCAGCTCCCTCCGAGAGCCGTGTTGGCCTaGAATGGGTCACAGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LLKASLGYIICNEHQLPPRAVLA*NGSQAW Trigger: CCAGGCCTGTGACCCATTCCAGGCCAACACGGCTCT...CGGAGGGAGCTGGTGCTCATTACAGATGATATAGCCCAGGCTAGCTTTCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAATGAGCACCAGCTCCCTCCGCAGGGTGGCCTCACACCCTCCTTAACAGCTGAAAGTGGCGTTGGGTaGAATTTCTTCCTCACCCCG | + |
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Preference number: 2 (lower is better) Translates to: CNEHQLPPQGGLTPSLTAESGVG*NFFLTP Trigger: CGGGGTGAGGAAGAAATTCCACCCAACGCCACTTTC...AGCTGTTAAGGAGGGTGTGAGGCCACCCTGCGGAGGGAGCTGGTGCTCATTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGACCAGGGAGTCTCTTGACCCTGGACATGCACGGAGAAGGGCACAGGTGGCGCTGAGTTCGTTCTaGCCTCTGTTTTACAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: TRTRESLDPGHARRRAQVALSSF*PLFYKG Trigger: TCCTTTGTAAAACAGAGGGCAGAACGAACTCAGCGC...CACCTGTGCCCTTCTCCGTGCATGTCCAGGGTCAAGAGACTCCCTGGTCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
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| 3UTR-3UTR GCA 90 bp | CTAAAGCCCAGGGTGCCATTCTTCAGTCTTCCAAAGGGGGAAGGAGGCAGAGCCGTGAGCTCTCAAGGCTaGCAGCATCCTAGTTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: LKPRVPFFSLPKGEGGRAVSSQG*QHPSSD Trigger: GTCTGAACTAGGATGCTGGCAGCCTTGAGAGCTCAC...GGCTCTGCCTCCTTCCCCCTTTGGAAGACTGAAGAATGGCACCCTGGGCTTTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | ACATCTGACACTCATCTAGCCGGCCCTTCTCAAAGTAGTGGTAGGGCACGGAGCAGCCTGATTGTCTCCTaGGCTTGTTCGGTCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TSDTHLAGPSQSSGRARSSLIVS*ACSVWL Trigger: CAGCCAGACCGAACAAGCCCAGGAGACAATCAGGCT...GCTCCGTGCCCTACCACTACTTTGAGAAGGGCCGGCTAGATGAGTGTCAGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146557.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAACCAGGGCCACCAGCCTGAGAATGTGGCACCATGTGGCTGGAGCCAGGTAAGATGTGGATTCTTCTaGAAGCAGGGGTGGTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: TNQGHQPENVAPCGWSQVRCGFF*KQGWCK Trigger: TTTACACCACCCCTGCTTCCAGAAGAATCCACATCT...TACCTGGCTCCAGCCACATGGTGCCACATTCTCAGGCTGGTGGCCCTGGTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGTCTCTAGTCACTCCTGGGAAAATGGGTAGGAGGGAGAGTGGGCTAGGCCCCAAGATGAAGATGTaGATTCTTCTGGAAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ARSLVTPGKMGRRESGLGPKMKM*ILLEAG Trigger: CCCTGCTTCCAGAAGAATCCACATCTTCATCTTGGG...GCCTAGCCCACTCTCCCTCCTACCCATTTTCCCAGGAGTGACTAGAGACCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | GCTAGCCTGGGCTATATCATCTGTAATGAGCACCAGCTCCCTCCGCAGGGTGGCCATGAGGCAGGAAAGTaGCGTTGGGTGGAATTTCTT | + |
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Preference number: 2 (lower is better) Translates to: ASLGYIICNEHQLPPQGGHEAGK*RWVEFL Trigger: AAGAAATTCCACCCAACGCCACTTTCCTGCCTCATG...GCCACCCTGCGGAGGGAGCTGGTGCTCATTACAGATGATATAGCCCAGGCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAATGAGCACCAGCTCCCTCCGCAGGGTGGCCTCACACCCTCCTTAACAGCTACTTCATGTTCTACCTaGTGTCAGGTAGAAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: CNEHQLPPQGGLTPSLTATSCST*CQVEGE Trigger: CTCACCTTCTACCTGACACCAGGTAGAACATGAAGT...AGCTGTTAAGGAGGGTGTGAGGCCACCCTGCGGAGGGAGCTGGTGCTCATTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAGGGTCCCGAACTCTGAAGCAGAGAGCTAAAGCCCAGGGTGCCATTCTTTTCTGGAAGCAGGGGTaGTGTAAATGGCATCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: PRGSRTLKQRAKAQGAILFWKQG*CKWHLL Trigger: GAGAAGATGCCATTTACACCACCCCTGCTTCCAGAA...AAGAATGGCACCCTGGGCTTTAGCTCTCTGCTTCAGAGTTCGGGACCCTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGTCTCTAGTCACTCCTGGGAAAATGGGTAGGAGGGAGAGTGGGCTAGGCGACTGGCAAAGACTTTaGAATCTGACTCATGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: ARSLVTPGKMGRRESGLGDWQRL*NLTHEA Trigger: TGCCTCATGAGTCAGATTCCAAAGTCTTTGCCAGTC...GCCTAGCCCACTCTCCCTCCTACCCATTTTCCCAGGAGTGACTAGAGACCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCTTGTCTAAGGGTTGGGTCAGCATTTCCTTATGGCTGAAAGCAGGAAGAGAGGGTCCCGAACTCTaGAGCAGAGAGCTAAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: CALSKGWVSISLWLKAGREGPEL*SRELKP Trigger: GGGCTTTAGCTCTCTGCTTCAGAGTTCGGGACCCTC...TCTTCCTGCTTTCAGCCATAAGGAAATGCTGACCCAACCCTTAGACAAGGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
||
| 3UTR-3UTR CCA 90 bp | GCTCAAAGGCCCTCACATCCATCAAATCCCAAGTTCCAGGGTGCACCAACCAGGTTCTGGAAGCAGGGGTaGTGTAAATGGCATCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: AQRPSHPSNPKFQGAPTRFWKQG*CKWHLL Trigger: GAGAAGATGCCATTTACACCACCCCTGCTTCCAGAA...CCTGGTTGGTGCACCCTGGAACTTGGGATTTGATGGATGTGAGGGCCTTTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR TCA 90 bp | GAACAGGCTACAGGCCTTGTCCTAACTAACCCCCATCCCACATCCGTTACCACAGGACAAACCCCAAGATaGAGATGTGGATTCTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: EQATGLVLTNPHPTSVTTGQTPR*RCGFFW Trigger: CCAGAAGAATCCACATCTTCATCTTGGGGTTTGTCC...TGTGGTAACGGATGTGGGATGGGGGTTAGTTAGGACAAGGCCTGTAGCCTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAAAATCAGCAGATCTTGGGCTAGCTGTAGCTTCACACAGCCATTTCCTGACTCAAGACAGTCAGTCCTaGGAGGCTGAGGCTCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PKSADLGLAVASHSHFLTQDSQS*EAEAQR Trigger: CCTTTGAGCCTCAGCCTCTCAGGACTGACTGTCTTG...AGTCAGGAAATGGCTGTGTGAAGCTACAGCTAGCCCAAGATCTGCTGATTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCCCGCGCTGAGTTCGTTCTGCCCTCTGTTTTACAAAGGAATCATGTCCCACATGAGGCAGGAAAGTaGCGTTGGGTGGAATTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PPRAEFVLPSVLQRNHVPHEAGK*RWVEFL Trigger: AAGAAATTCCACCCAACGCCACTTTCCTGCCTCATG...TGGGACATGATTCCTTTGTAAAACAGAGGGCAGAACGAACTCAGCGCGGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CAA 90 bp | CTCTTCAAGTCACAAGGCCTGAGGTTCCTCCGAGTGTACCCAGTGTaGGGTAATAGAGACTTCATGTTCTACCTGGTGTCAGGTAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LFKSQGLRFLRVYPV*GNRDFMFYLVSGRR Trigger: CCTTCTACCTGACACCAGGTAGAACATGAAGTCTCTATTACCCAACACTGGGTACACTCGGAGGAACCTCAGGCCTTGTGACTTGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCCCGCGCTGAGTTCGTTCTGCCCTCTGTTTTACAAAGGAATCATGTCCCAAGATGTGGATTCTTCTaGAAGCAGGGGTGGTGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: PPRAEFVLPSVLQRNHVPRCGFF*KQGWCK Trigger: TTTACACCACCCCTGCTTCCAGAAGAATCCACATCT...TGGGACATGATTCCTTTGTAAAACAGAGGGCAGAACGAACTCAGCGCGGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR TCA 90 bp | TTATTATTATTATTATTTTGCACTGATGCCACCTATGCCAGGGTGGAACAGGATCCGCTCTGTGCCTGTTaGGTGAGGGCAGGGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLLLLFCTDATYARVEQDPLCAC*VRAGWL Trigger: CAGCCACCCTGCCCTCACTCAACAGGCACAGAGCGG...ATCCTGTTCCACCCTGGCATAGGTGGCATCAGTGCAAAATAATAATAATAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR CCA 90 bp | GAACAGGCTACAGGCCTTGTCCTAACTAACCCCCATCCCACATCCGTTACCACAGAGTGTACCCAGTGTTaGGTAATAGAGACTTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: EQATGLVLTNPHPTSVTTECTQC*VIETSC Trigger: ACATGAAGTCTCTATTACCCAACACTGGGTACACTC...TGTGGTAACGGATGTGGGATGGGGGTTAGTTAGGACAAGGCCTGTAGCCTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR CCA 90 bp | CGTTACCACAGAGACACAGTGTCCAGAAAATCTGCCTTTACCAGCACACTCCCACCCAAGATGAAGATGTaGATTCTTCTGGAAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RYHRDTVSRKSAFTSTLPPKMKM*ILLEAG Trigger: CCCTGCTTCCAGAAGAATCCACATCTTCATCTTGGG...TGGGAGTGTGCTGGTAAAGGCAGATTTTCTGGACACTGTGTCTCTGTGGTAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCCTAACTAACCCCCATCCCACATCCGTTACCACAGAGACACAGTGTCCAGAAGTGTCAGGTAGAAGGTaGGTCATAAATGCTCACATT | + |
|
Preference number: 2 (lower is better) Translates to: VLTNPHPTSVTTETQCPEVSGRR*VINAHI Trigger: AATGTGAGCATTTATGACTCACCTTCTACCTGACAC...TTCTGGACACTGTGTCTCTGTGGTAACGGATGTGGGATGGGGGTTAGTTAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTTACAAAGGAATCATGTCCCACAGTTAAGAGACAGCCTGACTGGCAAAGACAAGACAGTCAGTCCTaGGAGGCTGAGGCTCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: CFTKESCPTVKRQPDWQRQDSQS*EAEAQR Trigger: CCTTTGAGCCTCAGCCTCTCAGGACTGACTGTCTTG...TCTTTGCCAGTCAGGCTGTCTCTTAACTGTGGGACATGATTCCTTTGTAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR CCA 90 bp | CGTTACCACAGAGACACAGTGTCCAGAAAATCTGCCTTTACCAGCACACTCCCAGAGTGTACCCAGTGTTaGGTAATAGAGACTTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: RYHRDTVSRKSAFTSTLPECTQC*VIETSC Trigger: ACATGAAGTCTCTATTACCCAACACTGGGTACACTC...TGGGAGTGTGCTGGTAAAGGCAGATTTTCTGGACACTGTGTCTCTGTGGTAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAGACACAGTGTCCAGAAAATCTGCCTTTACCAGCACACTCCCAAGACAGTGTGTCAGGTAGAAGGTaGGTCATAAATGCTCACATT | + |
|
Preference number: 2 (lower is better) Translates to: TETQCPENLPLPAHSQDSVSGRR*VINAHI Trigger: AATGTGAGCATTTATGACTCACCTTCTACCTGACAC...ACTGTCTTGGGAGTGTGCTGGTAAAGGCAGATTTTCTGGACACTGTGTCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR TCA 90 bp | TTATTATTATTATTATTTTGCACTGATGCCACCTATGCCAGGGTGGAACAGGATGAGGGTCCCGAACTCTaGAGCAGAGAGCTAAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LLLLLFCTDATYARVEQDEGPEL*SRELKP Trigger: GGGCTTTAGCTCTCTGCTTCAGAGTTCGGGACCCTC...ATCCTGTTCCACCCTGGCATAGGTGGCATCAGTGCAAAATAATAATAATAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAAAATCAGCAGATCTTGGGCTAGCTGTAGCTTCACACAGCCATTTCCTGACTTTAACAGCTAGGTGGTaGCTGTGTTTTAGTACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: PKSADLGLAVASHSHFLTLTARW*LCFSTE Trigger: TTCAGTACTAAAACACAGCCACCACCTAGCTGTTAA...AGTCAGGAAATGGCTGTGTGAAGCTACAGCTAGCCCAAGATCTGCTGATTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
||
| 3UTR-3UTR GCA 90 bp | TTATTATTATTATTATTTTGCACTGATGCCACCTATGCCAGGGTGGAACAGGATGTGAGCTCTCAAGGCTaGCAGCATCCTAGTTCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LLLLLFCTDATYARVEQDVSSQG*QHPSSD Trigger: GTCTGAACTAGGATGCTGGCAGCCTTGAGAGCTCAC...ATCCTGTTCCACCCTGGCATAGGTGGCATCAGTGCAAAATAATAATAATAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR CCA 90 bp | TTATTATTATTATTATTTTGCACTGATGCCACCTATGCCAGGGTGGAACAGGATGCAGGAAAGTGGCGTTaGGTGGAATTTCTTCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LLLLLFCTDATYARVEQDAGKWR*VEFLPH Trigger: GTGAGGAAGAAATTCCACCCAACGCCACTTTCCTGC...ATCCTGTTCCACCCTGGCATAGGTGGCATCAGTGCAAAATAATAATAATAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR TCA 72 bp | CCGAGTCCTCCCAGGCCCCGCTCTGTGCCTGTTGAGTaGGGGCAGGGTGGCTGTCCTGGGCCAGCACAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PSPPRPRSVPVE*GQGGCPGPAQS Trigger: GGACTGTGCTGGCCCAGGACAGCCACCCTGCCCTCACTCAACAGGCACAGAGCGGGGCCTGGGAGGACTCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR GCA 72 bp | TCTTCCTCACCCCGAGTCCTCCCAGGCCCCGCTCTGTaGCTGTTGAGTGAGGGCAGGGTGGCTGTCCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SSSPRVLPGPAL*LLSEGRVAVLG Trigger: GCCCAGGACAGCCACCCTGCCCTCACTCAACAGGCACAGAGCGGGGCCTGGGAGGACTCGGGGTGAGGAAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CCA 72 bp | CAGCCCCTCAGCCCCTCCAGGCCTGCGGAAACGGTTTaGCTTCCCGCCTGTAACCCTGGCTCAGAGATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QPLSPSRPAETV*LPACNPGSEIS Trigger: GGAAATCTCTGAGCCAGGGTTACAGGCGGGAAGCCAAACCGTTTCCGCAGGCCTGGAGGGGCTGAGGGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CCA 72 bp | ATGCCAGGACCCTTCGTCTCACCCACGACCCACTCATaGCCTATCCCTACACTCAGCCCCTCAGCCCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: MPGPFVSPTTHS*PIPTLSPSAPP Trigger: TGGAGGGGCTGAGGGGCTGAGTGTAGGGATAGGCCATGAGTGGGTCGTGGGTGAGACGAAGGGTCCTGGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR TCA 72 bp | CCAAGTTCCAGGGTGCACCAACCAGGGCCACCAGCCTaGGAATGTGGCACCATGTGGCTGGAGCCAGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PSSRVHQPGPPA*ECGTMWLEPGR Trigger: TCTACCTGGCTCCAGCCACATGGTGCCACATTCTCAGGCTGGTGGCCCTGGTTGGTGCACCCTGGAACTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CCA 72 bp | TCCACCTGGCACTGGACAGGGACAAGGGCAGTGTTGTaGGCCAGGTGCCAGGTCTCTAGTCACTCCTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: STWHWTGTRAVL*ARCQVSSHSWE Trigger: TTCCCAGGAGTGACTAGAGACCTGGCACCTGGCCCACAACACTGCCCTTGTCCCTGTCCAGTGCCAGGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGACCATCCCGTAGACCACGATCTCCTCGCACAGCTCCAGGGCCAGAATCATGATTGTCTCCTGGGCTaGTTCGGTCTGGCTGCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: ADHPVDHDLLAQLQGQNHDCLLG*FGLAAR Trigger: TCGGGCAGCCAGACCGAACAAGCCCAGGAGACAATC...ATGATTCTGGCCCTGGAGCTGTGCGAGGAGATCGTGGTCTACGGGATGGTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146557.2 |
||
| 3UTR TCA 72 bp | GGACCGCGCAGGTTACACCCAGAGGGTCCCGAACTCTaGAGCAGAGAGCTAAAGCCCAGGGTGCCATTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GPRRLHPEGPEL*SRELKPRVPFF Trigger: GAAGAATGGCACCCTGGGCTTTAGCTCTCTGCTTCAGAGTTCGGGACCCTCTGGGTGTAACCTGCGCGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR TCA 72 bp | GAGGGAGAGTGGGCTAGGCCACCAGAGCCCTTAGCATaGCGGGTTCTGCCCTTTGTGGGATCCGGTAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: EGEWARPPEPLA*RVLPFVGSGKE Trigger: TTCCTTACCGGATCCCACAAAGGGCAGAACCCGTCATGCTAAGGGCTCTGGTGGCCTAGCCCACTCTCCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAATGAGCACCAGCTCCCTCCGCAGGGTGGCCTCACACCCTCCTTAACAGCTATCAGAAGGTCAGGCTaGTGGGATGCTGGGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CNEHQLPPQGGLTPSLTAIRRSG*WDAGAG Trigger: TCCTGCCCCAGCATCCCACAAGCCTGACCTTCTGAT...AGCTGTTAAGGAGGGTGTGAGGCCACCCTGCGGAGGGAGCTGGTGCTCATTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CCA 72 bp | CAGCGGGAGAACACAGCCTTCTCGGTAATGAAGCGATaGGCGCTCCTTGGAGCCTGCTCATGCAAACGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: QRENTAFSVMKR*ALLGACSCKRY Trigger: GTACCGTTTGCATGAGCAGGCTCCAAGGAGCGCCCATCGCTTCATTACCGAGAAGGCTGTGTTCTCCCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146557.2 |
||
| 3UTR TCA 72 bp | TACTGTCTTTATTGCCTGGGAACATGGGGTCAGGCCTaGTGCCAGGACCCTTCGTCTCACCCACGACCCACT | + |
|
Preference number: 3 (lower is better) Translates to: YCLYCLGTWGQA*CQDPSSHPRPT Trigger: AGTGGGTCGTGGGTGAGACGAAGGGTCCTGGCATCAGGCCTGACCCCATGTTCCCAGGCAATAAAGACAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR TCA 72 bp | AATCATGGTGAACCAACCGGTGCTGAGAAAGGAGCCTaGTTGTCTCCTGGGCTTGTTCGGTCTGGCTGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: NHGEPTGAEKGA*LSPGLVRSGCP Trigger: CGGGCAGCCAGACCGAACAAGCCCAGGAGACAATCAGGCTCCTTTCTCAGCACCGGTTGGTTCACCATGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146557.2 |
||
| 3UTR GCA 72 bp | AAGGCCCTCACATCCATCAAATCCCAAGTTCCAGGGTaGACCAACCAGGGCCACCAGCCTGAGAATGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KALTSIKSQVPG*TNQGHQPENVA Trigger: TGCCACATTCTCAGGCTGGTGGCCCTGGTTGGTGCACCCTGGAACTTGGGATTTGATGGATGTGAGGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGACCAGGGAGTCTCTTGACCCTGGACATGCACGGAGAAGGGCACAGGTGACTCTACTGTCTTTATaGCCTGGGAACATGGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TRTRESLDPGHARRRAQVTLLSL*PGNMGS Trigger: TGACCCCATGTTCCCAGGCAATAAAGACAGTAGAGT...CACCTGTGCCCTTCTCCGTGCATGTCCAGGGTCAAGAGACTCCCTGGTCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
||
| 3UTR CCA 72 bp | CAGGGCCACCAGCCTGAGAATGTGGCACCATGTGGCTaGAGCCAGGTAGAGGAAAGGTTCAAGACTGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: QGHQPENVAPCG*SQVEERFKTGI Trigger: TATACCAGTCTTGAACCTTTCCTCTACCTGGCTCCAGCCACATGGTGCCACATTCTCAGGCTGGTGGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CCA 72 bp | TTCTTCAGTCTTCCAAAGGGGGAAGGAGGCAGAGCCTaGGTAGTGAGCTCTCAAGGCTGCCAGCATCCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: FFSLPKGEGGRA*VVSSQGCQHPS Trigger: ACTAGGATGCTGGCAGCCTTGAGAGCTCACTACCCAGGCTCTGCCTCCTTCCCCCTTTGGAAGACTGAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CCA 72 bp | CACAGCCTTCTCGGTAATGAAGCGATGGGCGCTCCTTaGAGCCTGCTCATGCAAACGGTACATCTGACACTC | + |
|
Preference number: 3 (lower is better) Translates to: HSLLGNEAMGAP*SLLMQTVHLTL Trigger: GAGTGTCAGATGTACCGTTTGCATGAGCAGGCTCCAAGGAGCGCCCATCGCTTCATTACCGAGAAGGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146557.2 |
||
| 3UTR TCA 72 bp | GAGACCACTCCTTTCTGGTCAGCACCCTCCCCGCGCTaGGTTCGTTCTGCCCTCTGTTTTACAAAGGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: ETTPFWSAPSPR*VRSALCFTKES Trigger: TGATTCCTTTGTAAAACAGAGGGCAGAACGAACTCAGCGCGGGGAGGGTGCTGACCAGAAAGGAGTGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CCA 72 bp | CTTTGGAATCTGACTCATGAGGCAGGAAAGTGGCGTTaGGTGGAATTTCTTCCTCACCCCGAGTCCTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LWNLTHEAGKWR*VEFLPHPESSQ Trigger: CTGGGAGGACTCGGGGTGAGGAAGAAATTCCACCCAACGCCACTTTCCTGCCTCATGAGTCAGATTCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR GCA 72 bp | TTTCTGGTCAGCACCCTCCCCGCGCTGAGTTCGTTCTaGCCTCTGTTTTACAAAGGAATCATGTCCCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: FLVSTLPALSSF*PLFYKGIMSHS Trigger: ACTGTGGGACATGATTCCTTTGTAAAACAGAGGGCAGAACGAACTCAGCGCGGGGAGGGTGCTGACCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR TCA 72 bp | TGGCATCTTCTCGACTCCTCTTCAAGTCACAAGGCCTaGGGTTCCTCCGAGTGTACCCAGTGTTGGGTAATA | + |
|
Preference number: 3 (lower is better) Translates to: WHLLDSSSSHKA*GSSECTQCWVI Trigger: TATTACCCAACACTGGGTACACTCGGAGGAACCTCAGGCCTTGTGACTTGAAGAGGAGTCGAGAAGATGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR GCA 72 bp | AACCTCTCAGACCTTATAGGAAAGTCCTCCCCAGCTTaGCGTACCCACCTTTCTGATGTCCCCACCAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: NLSDLIGKSSPA*RTHLSDVPTNV Trigger: TACATTGGTGGGGACATCAGAAAGGTGGGTACGGCAAGCTGGGGAGGACTTTCCTATAAGGTCTGAGAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
||
| 3UTR CCA 72 bp | ATGTGGCTGGAGCCAGGTAGAGGAAAGGTTCAAGACTaGTATAAAGCCATAATGCTGGTGAGGTGGGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: MWLEPGRGKVQD*YKAIMLVRWGH Trigger: ATGGCCCCACCTCACCAGCATTATGGCTTTATACCAGTCTTGAACCTTTCCTCTACCTGGCTCCAGCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CCA 72 bp | CAAAGACTTTGGAATCTGACTCATGAGGCAGGAAAGTaGCGTTGGGTGGAATTTCTTCCTCACCCCGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QRLWNLTHEAGK*RWVEFLPHPES Trigger: GGACTCGGGGTGAGGAAGAAATTCCACCCAACGCCACTTTCCTGCCTCATGAGTCAGATTCCAAAGTCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CCA 72 bp | CCCACAGTTAAGAGACAGCCTGACTGGCAAAGACTTTaGAATCTGACTCATGAGGCAGGAAAGTGGCGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PTVKRQPDWQRL*NLTHEAGKWRW Trigger: CCAACGCCACTTTCCTGCCTCATGAGTCAGATTCCAAAGTCTTTGCCAGTCAGGCTGTCTCTTAACTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR TCA 72 bp | CACTTAAACAACCTGGCAGTGGGACAAACCCCAAGATaGAGATGTGGATTCTTCTGGAAGCAGGGGTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: HLNNLAVGQTPR*RCGFFWKQGWC Trigger: ACACCACCCCTGCTTCCAGAAGAATCCACATCTTCATCTTGGGGTTTGTCCCACTGCCAGGTTGTTTAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR GCA 72 bp | CATCCGTTACCACAGAGACACAGTGTCCAGAAAATCTaGCTTTACCAGCACACTCCCAAGACAGTCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HPLPQRHSVQKI*LYQHTPKTVSP Trigger: AGGACTGACTGTCTTGGGAGTGTGCTGGTAAAGGCAGATTTTCTGGACACTGTGTCTCTGTGGTAACGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CCA 72 bp | AGATGTGGATTCTTCTGGAAGCAGGGGTGGTGTAAATaGCATCTTCTCGACTCCTCTTCAAGTCACAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RCGFFWKQGWCK*HLLDSSSSHKA Trigger: GGCCTTGTGACTTGAAGAGGAGTCGAGAAGATGCCATTTACACCACCCCTGCTTCCAGAAGAATCCACATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGACTACCTTTGTCAGAACATAGCTTCTACCAACCCAAAGCTCTCAACCTCTGGCAGGAAAGTGGCGTaGGGTGGAATTTCTTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PDYLCQNIASTNPKLSTSGRKVA*GGISSS Trigger: TGAGGAAGAAATTCCACCCAACGCCACTTTCCTGCC...AGAGGTTGAGAGCTTTGGGTTGGTAGAAGCTATGTTCTGACAAAGGTAGTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
||
| 3UTR TCA 72 bp | TTAAGAGACAGCCTGACTGGCAAAGACTTTGGAATCTaGCTCATGAGGCAGGAAAGTGGCGTTGGGTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LRDSLTGKDFGI*LMRQESGVGWN Trigger: ATTCCACCCAACGCCACTTTCCTGCCTCATGAGTCAGATTCCAAAGTCTTTGCCAGTCAGGCTGTCTCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR TCA 72 bp | TCAGGCAGAGGGCCACCCTATTTAAATGGTGGCTTCTaGATACTGAGAGCCAAGTGTGTTCTAAGTAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SGRGPPYLNGGF*ILRAKCVLSKP Trigger: GGGCTTACTTAGAACACACTTGGCTCTCAGTATTCAGAAGCCACCATTTAAATAGGGTGGCCCTCTGCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CCA 72 bp | ACAGGATCAGTCAGGCAGAGGGCCACCCTATTTAAATaGTGGCTTCTGAATACTGAGAGCCAAGTGTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TGSVRQRATLFK*WLLNTESQVCS Trigger: AGAACACACTTGGCTCTCAGTATTCAGAAGCCACCATTTAAATAGGGTGGCCCTCTGCCTGACTGATCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CCA 72 bp | TATTATTATTTTGCACTGATGCCACCTATGCCAGGGTaGAACAGGATCAGTCAGGCAGAGGGCCACCCTATT | + |
|
Preference number: 3 (lower is better) Translates to: YYYFALMPPMPG*NRISQAEGHPI Trigger: AATAGGGTGGCCCTCTGCCTGACTGATCCTGTTCCACCCTGGCATAGGTGGCATCAGTGCAAAATAATAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CCA 72 bp | AGGACAGAAGCATCTCTGTGTGCCTTGTCTAAGGGTTaGGTCAGCATTTCCTTATGGCTGAAAGCAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RTEASLCALSKG*VSISLWLKAGR Trigger: TCTTCCTGCTTTCAGCCATAAGGAAATGCTGACCCAACCCTTAGACAAGGCACACAGAGATGCTTCTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
||
| 3UTR CCA 72 bp | AAGGAATCATGTCCCACAGTTAAGAGACAGCCTGACTaGCAAAGACTTTGGAATCTGACTCATGAGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KESCPTVKRQPD*QRLWNLTHEAG Trigger: TCCTGCCTCATGAGTCAGATTCCAAAGTCTTTGCCAGTCAGGCTGTCTCTTAACTGTGGGACATGATTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR TCA 72 bp | GAACATGGAATTCGGGGTAACATACATCTCTGTTCCTaGGTCACAGTCACTCAAAATGGCACCAGAAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: EHGIRGNIHLCS*VTVTQNGTRRH Trigger: GTGTCTTCTGGTGCCATTTTGAGTGACTGTGACTCAGGAACAGAGATGTATGTTACCCCGAATTCCATGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
||
| 3UTR-3UTR CAA 90 bp | TTATTATTATTATTATTTTGCACTGATGCCACCTATGCCAGGGTGGAACAGGATGGCAGGAAAGTGGCGTaGGGTGGAATTTCTTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLLLLFCTDATYARVEQDGRKVA*GGISSS Trigger: TGAGGAAGAAATTCCACCCAACGCCACTTTCCTGCC...ATCCTGTTCCACCCTGGCATAGGTGGCATCAGTGCAAAATAATAATAATAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR TCA 72 bp | TTAGGACTTTATGTTCCGCAAAACTATAAAACTTCATaGAACTGTTTCCGCAACGGAACATGGAATTCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LGLYVPQNYKTS*NCFRNGTWNSG Trigger: CCCCGAATTCCATGTTCCGTTGCGGAAACAGTTTCATGAAGTTTTATAGTTTTGCGGAACATAAAGTCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
||
| 3UTR TCA 72 bp | GAGAACATCATCATTATTATTATTATTATTTTGCACTaGTGCCACCTATGCCAGGGTGGAACAGGATCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: ENIIIIIIIILH*CHLCQGGTGSV Trigger: GACTGATCCTGTTCCACCCTGGCATAGGTGGCATCAGTGCAAAATAATAATAATAATAATGATGATGTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR GCA 72 bp | AGGATGAGAACATCATCATTATTATTATTATTATTTTaGACTGATGCCACCTATGCCAGGGTGGAACAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: RMRTSSLLLLLF*TDATYARVEQD Trigger: ATCCTGTTCCACCCTGGCATAGGTGGCATCAGTGCAAAATAATAATAATAATAATGATGATGTTCTCATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGCTAAAGCCCAGGGTGCCATTCTTCAGTCTTCCAAAGGGGGAAGGAGGCGGGGCCGCAGGGAGGTaGCGGTCCAGGCAGGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RELKPRVPFFSLPKGEGGGAAGR*RSRQVA Trigger: GGCAACCTGCCTGGACCGCCACCTCCCTGCGGCCCC...GCCTCCTTCCCCCTTTGGAAGACTGAAGAATGGCACCCTGGGCTTTAGCTCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR CCA 90 bp | GCTAGCCTGGGCTATATCATCTGTAATGAGCACCAGCTCCCTCCGCAGGGTGGCGCCCTCCAGGACGGGTaGGCGAACACGATGGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLGYIICNEHQLPPQGGALQDG*ANTMGR Trigger: GCGACCCATCGTGTTCGCCCACCCGTCCTGGAGGGC...GCCACCCTGCGGAGGGAGCTGGTGCTCATTACAGATGATATAGCCCAGGCTAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR CCA 90 bp | GCCCTCACATCCATCAAATCCCAAGTTCCAGGGTGCACCAACCAGGGCCACCAGGCCCTCCAGGACGGGTaGGCGAACACGATGGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ALTSIKSQVPGCTNQGHQALQDG*ANTMGR Trigger: GCGACCCATCGTGTTCGCCCACCCGTCCTGGAGGGC...CTGGTGGCCCTGGTTGGTGCACCCTGGAACTTGGGATTTGATGGATGTGAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR GCA 90 bp | GCCCTCACATCCATCAAATCCCAAGTTCCAGGGTGCACCAACCAGGGCCACCAGCCCTGTCCATGTGCCTaGCCTGGCCCCACACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: ALTSIKSQVPGCTNQGHQPCPCA*PGPTPR Trigger: ACGTGGTGTGGGGCCAGGGCAGGCACATGGACAGGG...CTGGTGGCCCTGGTTGGTGCACCCTGGAACTTGGGATTTGATGGATGTGAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR GCA 90 bp | TGTAATGAGCACCAGCTCCCTCCGCAGGGTGGCCTCACACCCTCCTTAACAGCTAGCACCCTGTCCATGTaGCTGCCCTGGCCCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: CNEHQLPPQGGLTPSLTASTLSM*LPWPHT Trigger: GGTGTGGGGCCAGGGCAGGCACATGGACAGGGTGCT...AGCTGTTAAGGAGGGTGTGAGGCCACCCTGCGGAGGGAGCTGGTGCTCATTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCGCGCTGAGTTCGTTCTGCCCTCTGTTTTACAAAGGAATCATGTCCCAGGGGCCGCAGGGAGGTaGCGGTCCAGGCAGGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPRAEFVLPSVLQRNHVPGAAGR*RSRQVA Trigger: GGCAACCTGCCTGGACCGCCACCTCCCTGCGGCCCC...TGGGACATGATTCCTTTGTAAAACAGAGGGCAGAACGAACTCAGCGCGGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR CCA 90 bp | TGTAATGAGCACCAGCTCCCTCCGCAGGGTGGCCTCACACCCTCCTTAACAGCTTCTGCGCCATCGATCTaGGCACCCAGGCCTGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: CNEHQLPPQGGLTPSLTASAPSI*APRPEP Trigger: GGGTTCAGGCCTGGGTGCCCAGATCGATGGCGCAGA...AGCTGTTAAGGAGGGTGTGAGGCCACCCTGCGGAGGGAGCTGGTGCTCATTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCACATCCATCAAATCCCAAGTTCCAGGGTGCACCAACCAGGGCCACCAGCGGTGGGCGAACACGATaGGTCGCTTCTTGGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSHPSNPKFQGAPTRATSGGRTR*VASWPS Trigger: GCTGGGCCAAGAAGCGACCCATCGTGTTCGCCCACC...GCTGGTGGCCCTGGTTGGTGCACCCTGGAACTTGGGATTTGATGGATGTGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGCTAAAGCCCAGGGTGCCATTCTTCAGTCTTCCAAAGGGGGAAGGAGGTCACGCGCAGAGTGCTaGGCTGGCCCACGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRAKAQGAILQSSKGGRRSRAEC*AGPRPP Trigger: AGGAGGACGTGGGCCAGCGCAGCACTCTGCGCGTGA...CCTCCTTCCCCCTTTGGAAGACTGAAGAATGGCACCCTGGGCTTTAGCTCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCGCGCTGAGTTCGTTCTGCCCTCTGTTTTACAAAGGAATCATGTCCCACTGGCACAGTGGATCTaGGGGCCGCAGGGAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPRAEFVLPSVLQRNHVPLAQWI*GPQGGG Trigger: GCCACCTCCCTGCGGCCCCCAGATCCACTGTGCCAG...TGGGACATGATTCCTTTGTAAAACAGAGGGCAGAACGAACTCAGCGCGGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR CCA 90 bp | GAACAGGCTACAGGCCTTGTCCTAACTAACCCCCATCCCACATCCGTTACCACACTGGCACAGTGGATCTaGGGGCCGCAGGGAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQATGLVLTNPHPTSVTTLAQWI*GPQGGG Trigger: GCCACCTCCCTGCGGCCCCCAGATCCACTGTGCCAG...TGTGGTAACGGATGTGGGATGGGGGTTAGTTAGGACAAGGCCTGTAGCCTGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGTCTCTAGTCACTCCTGGGAAAATGGGTAGGAGGGAGAGTGGGCTAGGCCCTGAACCCAGCATCTaGCCAGAGCTGGACACCACC | + |
|
Preference number: 4 (lower is better) Translates to: ARSLVTPGKMGRRESGLGPEPSI*PELDTT Trigger: GGTGGTGTCCAGCTCTGGCCAGATGCTGGGTTCAGG...GCCTAGCCCACTCTCCCTCCTACCCATTTTCCCAGGAGTGACTAGAGACCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTCAGACCATCAGAAGGTCAGGCTTGTGGGATGCTGGGGCAGGAGACTGTATCAAGATGCACAGTGTaGGGAGCAGAAGGCGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VVRPSEGQACGMLGQETVSRCTV*GAEGGP Trigger: CGGGCCGCCTTCTGCTCCTCACACTGTGCATCTTGA...TACAGTCTCCTGCCCCAGCATCCCACAAGCCTGACCTTCTGATGGTCTGACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR TCA 90 bp | GAACAGGCTACAGGCCTTGTCCTAACTAACCCCCATCCCACATCCGTTACCACACTGGGCACCCAGGCCTaGACCCAGCATCTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EQATGLVLTNPHPTSVTTLGTQA*TQHLAR Trigger: TCTGGCCAGATGCTGGGTTCAGGCCTGGGTGCCCAG...TGTGGTAACGGATGTGGGATGGGGGTTAGTTAGGACAAGGCCTGTAGCCTGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGCGAACACGATGGGTCGCTTCTTGGCCCAGCGGGAGAACACAGCCTTCTCCTGGATACATTCTGGTaGGCTGCAGCAACGTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGEHDGSLLGPAGEHSLLLDTFW*AAATFG Trigger: ACCGAACGTTGCTGCAGCTCACCAGAATGTATCCAG...GAGAAGGCTGTGTTCTCCCGCTGGGCCAAGAAGCGACCCATCGTGTTCGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146557.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTAAAGCCCAGGGTGCCATTCTTCAGTCTTCCAAAGGGGGAAGGAGGCAGACCCACGGTGGGTGCCTaGTTCATGCGTAGCACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELKPRVPFFSLPKGEGGRPTVGA*FMRSTH Trigger: GTGCGTGCTACGCATGAACCAGGCACCCACCGTGGG...TCTGCCTCCTTCCCCCTTTGGAAGACTGAAGAATGGCACCCTGGGCTTTAGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGCCACCAGCCTGAGAATGTGGCACCATGTGGCTGGAGCCAGGTAGAGGAACTGGATACATTCTGGTaGGCTGCAGCAACGTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGHQPENVAPCGWSQVEELDTFW*AAATFG Trigger: ACCGAACGTTGCTGCAGCTCACCAGAATGTATCCAG...TTCCTCTACCTGGCTCCAGCCACATGGTGCCACATTCTCAGGCTGGTGGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAGACACAGTGTCCAGAAAATCTGCCTTTACCAGCACACTCCCAAGACAGTGGGGCCCTGGCACAGTaGATCTGGGGGCCGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TETQCPENLPLPAHSQDSGALAQ*IWGPQG Trigger: TCCCTGCGGCCCCCAGATCCACTGTGCCAGGGCCCC...ACTGTCTTGGGAGTGTGCTGGTAAAGGCAGATTTTCTGGACACTGTGTCTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR CCA 90 bp | GCTCAAAGGCCCTCACATCCATCAAATCCCAAGTTCCAGGGTGCACCAACCAGGCGATGGGTCGCTTCTTaGCCCAGCGGGAGAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: AQRPSHPSNPKFQGAPTRRWVAS*PSGRTQ Trigger: CTGTGTTCTCCCGCTGGGCCAAGAAGCGACCCATCG...CCTGGTTGGTGCACCCTGGAACTTGGGATTTGATGGATGTGAGGGCCTTTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTGAAAGCTAGCCTGGGCTATATCATCTGTAATGAGCACCAGCTCCCTCCGTCAAGATGCACAGTGTaGGGAGCAGAAGGCGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLKASLGYIICNEHQLPPSRCTV*GAEGGP Trigger: CGGGCCGCCTTCTGCTCCTCACACTGTGCATCTTGA...CGGAGGGAGCTGGTGCTCATTACAGATGATATAGCCCAGGCTAGCTTTCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCAGGGGTGGTGTAAATGGCATCTTCTCGACTCCTCTTCAAGTCACAAGCCCTGTCCATGTGCCTaGCCTGGCCCCACACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: WKQGWCKWHLLDSSSSHKPCPCA*PGPTPR Trigger: ACGTGGTGTGGGGCCAGGGCAGGCACATGGACAGGG...CTTGTGACTTGAAGAGGAGTCGAGAAGATGCCATTTACACCACCCCTGCTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR TCA 90 bp | TCGCACAGCTCCAGGGCCAGAATCATGGTGAACCAACCGGTGCTGAGAAAGGAGCCATCATGCGTTCAGTaGAGGTGTACACTTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHSSRARIMVNQPVLRKEPSCVQ*RCTLAG Trigger: GCCTGCAAGTGTACACCTTCACTGAACGCATGATGG...CTCCTTTCTCAGCACCGGTTGGTTCACCATGATTCTGGCCCTGGAGCTGTGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146557.2 |
||
| CDS-3UTR GCA 90 bp | CCTGACTACCTTTGTCAGAACATAGCTTCTACCAACCCAAAGCTCTCAACCTCTGCGGTCCAGGCAGGTTaGCAGGCAGAGCGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PDYLCQNIASTNPKLSTSAVQAG*QAERQA Trigger: TGCCTGCCGCTCTGCCTGGCAACCTGCCTGGACCGC...AGAGGTTGAGAGCTTTGGGTTGGTAGAAGCTATGTTCTGACAAAGGTAGTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
||
| CDS-3UTR GCA 90 bp | GTCCTAACTAACCCCCATCCCACATCCGTTACCACAGAGACACAGTGTCCAGAATGGGTGCCTGGTTCATaGGTAGCACGCACTCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLTNPHPTSVTTETQCPEWVPGS*VARTLR Trigger: GCGCAGAGTGCGTGCTACGCATGAACCAGGCACCCA...TTCTGGACACTGTGTCTCTGTGGTAACGGATGTGGGATGGGGGTTAGTTAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR GCA 90 bp | TACCCAGTGTTGGGTAATAGAGACTTCATGTTCTACCTGGTGTCAGGTAGAAGGAGCACCCTGTCCATGTaGCTGCCCTGGCCCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: YPVLGNRDFMFYLVSGRRSTLSM*LPWPHT Trigger: GGTGTGGGGCCAGGGCAGGCACATGGACAGGGTGCT...CCTTCTACCTGACACCAGGTAGAACATGAAGTCTCTATTACCCAACACTGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCGCGCTGAGTTCGTTCTGCCCTCTGTTTTACAAAGGAATCATGTCCCACCATCATGCGTTCAGTaGAGGTGTACACTTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPRAEFVLPSVLQRNHVPPSCVQ*RCTLAG Trigger: GCCTGCAAGTGTACACCTTCACTGAACGCATGATGG...TGGGACATGATTCCTTTGTAAAACAGAGGGCAGAACGAACTCAGCGCGGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTTACAAAGGAATCATGTCCCACAGTTAAGAGACAGCCTGACTGGCAAAGAGCGGTCCAGGCAGGTTaGCAGGCAGAGCGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CFTKESCPTVKRQPDWQRAVQAG*QAERQA Trigger: TGCCTGCCGCTCTGCCTGGCAACCTGCCTGGACCGC...TCTTTGCCAGTCAGGCTGTCTCTTAACTGTGGGACATGATTCCTTTGTAAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAGACACAGTGTCCAGAAAATCTGCCTTTACCAGCACACTCCCAAGACAGTTGGGTGCCTGGTTCATaGGTAGCACGCACTCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TETQCPENLPLPAHSQDSWVPGS*VARTLR Trigger: GCGCAGAGTGCGTGCTACGCATGAACCAGGCACCCA...ACTGTCTTGGGAGTGTGCTGGTAAAGGCAGATTTTCTGGACACTGTGTCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR CCA 90 bp | CCTGACTACCTTTGTCAGAACATAGCTTCTACCAACCCAAAGCTCTCAACCTCTTCTGCGCCATCGATCTaGGCACCCAGGCCTGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: PDYLCQNIASTNPKLSTSSAPSI*APRPEP Trigger: GGGTTCAGGCCTGGGTGCCCAGATCGATGGCGCAGA...AGAGGTTGAGAGCTTTGGGTTGGTAGAAGCTATGTTCTGACAAAGGTAGTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
||
| 3UTR CAA 72 bp | CAATCTGGTGAGGCAGGAACTACTCTACTGTCTTTATaGCCTGGGAACATGGGGTCAGGCCTGATGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSGEAGTTLLSL*PGNMGSGLMPG Trigger: TCCTGGCATCAGGCCTGACCCCATGTTCCCAGGCAATAAAGACAGTAGAGTAGTTCCTGCCTCACCAGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| 3UTR CAA 72 bp | CACCCAGAAGCCAGGACAGAAGCATCTCTGTGTGCCTaGTCTAAGGGTTGGGTCAGCATTTCCTTATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPEARTEASLCA*SKGWVSISLWL Trigger: CAGCCATAAGGAAATGCTGACCCAACCCTTAGACAAGGCACACAGAGATGCTTCTGTCCTGGCTTCTGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
||
| CDS-3UTR TCA 90 bp | TGTTTTACAAAGGAATCATGTCCCACAGTTAAGAGACAGCCTGACTGGCAAAGACTGGGCACCCAGGCCTaGACCCAGCATCTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CFTKESCPTVKRQPDWQRLGTQA*TQHLAR Trigger: TCTGGCCAGATGCTGGGTTCAGGCCTGGGTGCCCAG...TCTTTGCCAGTCAGGCTGTCTCTTAACTGTGGGACATGATTCCTTTGTAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
||
| CDS-3UTR GCA 90 bp | TCGCACAGCTCCAGGGCCAGAATCATGGTGAACCAACCGGTGCTGAGAAAGGAGCTTGAGAACGGTTCTTaGCTGTCTCATCTTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHSSRARIMVNQPVLRKELENGS*LSHLGR Trigger: TCTTCCAAGATGAGACAGGCAAGAACCGTTCTCAAG...CTCCTTTCTCAGCACCGGTTGGTTCACCATGATTCTGGCCCTGGAGCTGTGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146557.2 |
||
| CDS-3UTR CCA 90 bp | CCTGACTACCTTTGTCAGAACATAGCTTCTACCAACCCAAAGCTCTCAACCTCTCGATGGGTCGCTTCTTaGCCCAGCGGGAGAACACAG | + |
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Preference number: 4 (lower is better) Translates to: PDYLCQNIASTNPKLSTSRWVAS*PSGRTQ Trigger: CTGTGTTCTCCCGCTGGGCCAAGAAGCGACCCATCG...AGAGGTTGAGAGCTTTGGGTTGGTAGAAGCTATGTTCTGACAAAGGTAGTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102818.11 |
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| CDS-3UTR TCA 90 bp | ACAGAGACACAGTGTCCAGAAAATCTGCCTTTACCAGCACACTCCCAAGACAGTTGCAAACGGTACATCTaGCACTCATCTAGCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: TETQCPENLPLPAHSQDSCKRYI*HSSSRP Trigger: GGGCCGGCTAGATGAGTGTCAGATGTACCGTTTGCA...ACTGTCTTGGGAGTGTGCTGGTAAAGGCAGATTTTCTGGACACTGTGTCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS-3UTR GCA 90 bp | CAGAGAGCTAAAGCCCAGGGTGCCATTCTTCAGTCTTCCAAAGGGGGAAGGAGGATTGTCTCCGGTTCTTaGCTGTCTCATCTTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: QRAKAQGAILQSSKGGRRIVSGS*LSHLGR Trigger: TCTTCCAAGATGAGACAGGCAAGAACCGGAGACAAT...CCTCCTTCCCCCTTTGGAAGACTGAAGAATGGCACCCTGGGCTTTAGCTCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS-3UTR TCA 90 bp | CTCCTGAAAGCTAGCCTGGGCTATATCATCTGTAATGAGCACCAGCTCCCTCCGATGCTGGAAATAGTGTaGGTAGTTGCGCAGAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: LLKASLGYIICNEHQLPPMLEIV*VVAQKQ Trigger: TTGCTTCTGCGCAACTACTCACACTATTTCCAGCAT...CGGAGGGAGCTGGTGCTCATTACAGATGATATAGCCCAGGCTAGCTTTCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS-3UTR TCA 90 bp | TACCCAGTGTTGGGTAATAGAGACTTCATGTTCTACCTGGTGTCAGGTAGAAGGTGCAAACGGTACATCTaGCACTCATCTAGCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: YPVLGNRDFMFYLVSGRRCKRYI*HSSSRP Trigger: GGGCCGGCTAGATGAGTGTCAGATGTACCGTTTGCA...CCTTCTACCTGACACCAGGTAGAACATGAAGTCTCTATTACCCAACACTGGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| 3UTR CAA 72 bp | TCACAAGGCCTGAGGTTCCTCCGAGTGTACCCAGTGTaGGGTAATAGAGACTTCATGTTCTACCTGGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SQGLRFLRVYPV*GNRDFMFYLVS Trigger: TGACACCAGGTAGAACATGAAGTCTCTATTACCCAACACTGGGTACACTCGGAGGAACCTCAGGCCTTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS-3UTR TCA 90 bp | TACCCAGTGTTGGGTAATAGAGACTTCATGTTCTACCTGGTGTCAGGTAGAAGGCTGGATACATTCTGGTaGGCTGCAGCAACGTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: YPVLGNRDFMFYLVSGRRLDTFW*AAATFG Trigger: ACCGAACGTTGCTGCAGCTCACCAGAATGTATCCAG...CCTTCTACCTGACACCAGGTAGAACATGAAGTCTCTATTACCCAACACTGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS-3UTR GCA 90 bp | TCTTCTGGAAGCAGGGGTGGTGTAAATGGCATCTTCTCGACTCCTCTTCAAGTCATTGTCTCCGGTTCTTaGCTGTCTCATCTTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SSGSRGGVNGIFSTPLQVIVSGS*LSHLGR Trigger: TCTTCCAAGATGAGACAGGCAAGAACCGGAGACAAT...GACTTGAAGAGGAGTCGAGAAGATGCCATTTACACCACCCCTGCTTCCAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS-3UTR CCA 90 bp | TTATTATTATTATTATTTTGCACTGATGCCACCTATGCCAGGGTGGAACAGGATCCTGAACCCAGCATCTaGCCAGAGCTGGACACCACC | + |
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Preference number: 4 (lower is better) Translates to: LLLLLFCTDATYARVEQDPEPSI*PELDTT Trigger: GGTGGTGTCCAGCTCTGGCCAGATGCTGGGTTCAGG...ATCCTGTTCCACCCTGGCATAGGTGGCATCAGTGCAAAATAATAATAATAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS-3UTR TCA 90 bp | TTATTATTATTATTATTTTGCACTGATGCCACCTATGCCAGGGTGGAACAGGATCCATCATGCGTTCAGTaGAGGTGTACACTTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LLLLLFCTDATYARVEQDPSCVQ*RCTLAG Trigger: GCCTGCAAGTGTACACCTTCACTGAACGCATGATGG...ATCCTGTTCCACCCTGGCATAGGTGGCATCAGTGCAAAATAATAATAATAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS CCA 90 bp | AAGTGCAGGGGCCCTGGCACAGTGGATCTGGGGGCCGCAGGGAGGTaGCGGTCCAGGCAGGTTGCCAGGCAGAGCGGCAGGCAGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: KCRGPGTVDLGAAGR*RSRQVARQSGRQAQ Trigger: CTGGGCCTGCCTGCCGCTCTGCCTGGCAACCTGCCTGGACCGCCACCTCCCTGCGGCCCCCAGATCCACTGTGCCAGGGCCCCTGCACTT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS CCA 90 bp | CACTCTGCGCCATCGATCTGGGCACCCAGGCCTGAACCCAGCATCTaGCCAGAGCTGGACACCACCGCACAGCTGTGGCACAGTTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: HSAPSIWAPRPEPSI*PELDTTAQLWHSSR Trigger: CCGAGAACTGTGCCACAGCTGTGCGGTGGTGTCCAGCTCTGGCCAGATGCTGGGTTCAGGCCTGGGTGCCCAGATCGATGGCGCAGAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS CCA 90 bp | GTGGGTGCCTGGTTCATGCGTAGCACGCACTCTGCGCCATCGATCTaGGCACCCAGGCCTGAACCCAGCATCTGGCCAGAGCTGGACACC | + |
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Preference number: 5 (lower is better) Translates to: VGAWFMRSTHSAPSI*APRPEPSIWPELDT Trigger: GGTGTCCAGCTCTGGCCAGATGCTGGGTTCAGGCCTGGGTGCCCAGATCGATGGCGCAGAGTGCGTGCTACGCATGAACCAGGCACCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS-3UTR CAA 90 bp | CTAAAGCCCAGGGTGCCATTCTTCAGTCTTCCAAAGGGGGAAGGAGGCAGAGCCGGCGGTCCAGGCAGGTaGCCAGGCAGAGCGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: LKPRVPFFSLPKGEGGRAGGPGR*PGRAAG Trigger: GCCTGCCGCTCTGCCTGGCAACCTGCCTGGACCGCC...GGCTCTGCCTCCTTCCCCCTTTGGAAGACTGAAGAATGGCACCCTGGGCTTTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS CCA 90 bp | CACCGCACAGCTGTGGCACAGTTCTCGGATAAGAGGCTTCCCGTCTaGCACGCTGCTGTAGCCACTGAAGTGCAGGGGCCCTGGCACAGT | + |
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Preference number: 5 (lower is better) Translates to: HRTAVAQFSDKRLPV*HAAVATEVQGPWHS Trigger: ACTGTGCCAGGGCCCCTGCACTTCAGTGGCTACAGCAGCGTGCCAGACGGGAAGCCTCTTATCCGAGAACTGTGCCACAGCTGTGCGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS CCA 90 bp | CCTGAACCCAGCATCTGGCCAGAGCTGGACACCACCGCACAGCTGTaGCACAGTTCTCGGATAAGAGGCTTCCCGTCTGGCACGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: PEPSIWPELDTTAQL*HSSRIRGFPSGTLL Trigger: CAGCAGCGTGCCAGACGGGAAGCCTCTTATCCGAGAACTGTGCCACAGCTGTGCGGTGGTGTCCAGCTCTGGCCAGATGCTGGGTTCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS-3UTR CAA 90 bp | GTCCTAACTAACCCCCATCCCACATCCGTTACCACAGAGACACAGTGTCCAGAAGGCGGTCCAGGCAGGTaGCCAGGCAGAGCGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: VLTNPHPTSVTTETQCPEGGPGR*PGRAAG Trigger: GCCTGCCGCTCTGCCTGGCAACCTGCCTGGACCGCC...TTCTGGACACTGTGTCTCTGTGGTAACGGATGTGGGATGGGGGTTAGTTAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCCACCAGCCTGAGAATGTGGCACCATGTGGCTGGAGCCAGGTAGAGGAAACGATGGGTCGCTTCTaGGCCCAGCGGGAGAACACA | + |
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Preference number: 5 (lower is better) Translates to: QGHQPENVAPCGWSQVEETMGRF*AQRENT Trigger: TGTGTTCTCCCGCTGGGCCAAGAAGCGACCCATCGT...TTCCTCTACCTGGCTCCAGCCACATGGTGCCACATTCTCAGGCTGGTGGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS-3UTR CAA 90 bp | GAACAGGCTACAGGCCTTGTCCTAACTAACCCCCATCCCACATCCGTTACCACAACGATGGGTCGCTTCTaGGCCCAGCGGGAGAACACA | + |
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Preference number: 5 (lower is better) Translates to: EQATGLVLTNPHPTSVTTTMGRF*AQRENT Trigger: TGTGTTCTCCCGCTGGGCCAAGAAGCGACCCATCGT...TGTGGTAACGGATGTGGGATGGGGGTTAGTTAGGACAAGGCCTGTAGCCTGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS TCA 90 bp | GCCCCACACCACGTAGAGCGTGTCTCGGGCATGCTGGAAATAGTGTaGGTAGTTGCGCAGAAGCAATGGCACACTTGTGTGAGAGATCAC | + |
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Preference number: 5 (lower is better) Translates to: APHHVERVSGMLEIV*VVAQKQWHTCVRDH Trigger: GTGATCTCTCACACAAGTGTGCCATTGCTTCTGCGCAACTACTCACACTATTTCCAGCATGCCCGAGACACGCTCTACGTGGTGTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS GCA 90 bp | CCACGTAGAGCGTGTCTCGGGCATGCTGGAAATAGTGTGAGTAGTTaGGCAGAAGCAATGGCACACTTGTGTGAGAGATCACGCGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: PRRACLGHAGNSVSS*AEAMAHLCERSRAE Trigger: CTCTGCGCGTGATCTCTCACACAAGTGTGCCATTGCTTCTGCGCAACTACTCACACTATTTCCAGCATGCCCGAGACACGCTCTACGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS CCA 72 bp | CCATCGATCTGGGCACCCAGGCCTGAACCCAGCATCTaGCCAGAGCTGGACACCACCGCACAGCTGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PSIWAPRPEPSI*PELDTTAQLWH Trigger: GTGCCACAGCTGTGCGGTGGTGTCCAGCTCTGGCCAGATGCTGGGTTCAGGCCTGGGTGCCCAGATCGATGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS GCA 72 bp | GCAATGGCACACTTGTGTGAGAGATCACGCGCAGAGTaGTGCGCTGGCCCACGTCCTCCTCAAAGCCCACGG | + |
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Preference number: 6 (lower is better) Translates to: AMAHLCERSRAE*CAGPRPPQSPR Trigger: CCGTGGGCTTTGAGGAGGACGTGGGCCAGCGCAGCACTCTGCGCGTGATCTCTCACACAAGTGTGCCATTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS CCA 72 bp | GCTGTGGCACAGTTCTCGGATAAGAGGCTTCCCGTCTaGCACGCTGCTGTAGCCACTGAAGTGCAGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AVAQFSDKRLPV*HAAVATEVQGP Trigger: GGGCCCCTGCACTTCAGTGGCTACAGCAGCGTGCCAGACGGGAAGCCTCTTATCCGAGAACTGTGCCACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS CAA 72 bp | CTCCAGGACGGGTGGGCGAACACGATGGGTCGCTTCTaGGCCCAGCGGGAGAACACAGCCTTCTCGGTAATG | + |
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Preference number: 6 (lower is better) Translates to: LQDGWANTMGRF*AQRENTAFSVM Trigger: CATTACCGAGAAGGCTGTGTTCTCCCGCTGGGCCAAGAAGCGACCCATCGTGTTCGCCCACCCGTCCTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS CAA 90 bp | TACTTGGCCCTCCAGGACGGGTGGGCGAACACGATGGGTCGCTTCTaGGCCCAGCGGGAGAACACAGCCTTCTCGGTAATGAAGCGATGG | + |
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Preference number: 6 (lower is better) Translates to: YLALQDGWANTMGRF*AQRENTAFSVMKRW Trigger: CCATCGCTTCATTACCGAGAAGGCTGTGTTCTCCCGCTGGGCCAAGAAGCGACCCATCGTGTTCGCCCACCCGTCCTGGAGGGCCAAGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS CCA 72 bp | AGCATCTGGCCAGAGCTGGACACCACCGCACAGCTGTaGCACAGTTCTCGGATAAGAGGCTTCCCGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SIWPELDTTAQL*HSSRIRGFPSG Trigger: GCCAGACGGGAAGCCTCTTATCCGAGAACTGTGCCACAGCTGTGCGGTGGTGTCCAGCTCTGGCCAGATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS CAA 90 bp | CATGCTGGAAATAGTGTGAGTAGTTGCGCAGAAGCAATGGCACACTaGTGTGAGAGATCACGCGCAGAGTGCTGCGCTGGCCCACGTCCT | + |
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Preference number: 6 (lower is better) Translates to: HAGNSVSSCAEAMAH*CERSRAECCAGPRP Trigger: AGGACGTGGGCCAGCGCAGCACTCTGCGCGTGATCTCTCACACAAGTGTGCCATTGCTTCTGCGCAACTACTCACACTATTTCCAGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS CAA 72 bp | AATAGTGTGAGTAGTTGCGCAGAAGCAATGGCACACTaGTGTGAGAGATCACGCGCAGAGTGCTGCGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: NSVSSCAEAMAH*CERSRAECCAG Trigger: GCCAGCGCAGCACTCTGCGCGTGATCTCTCACACAAGTGTGCCATTGCTTCTGCGCAACTACTCACACTATT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS TCA 72 bp | CACGTAGAGCGTGTCTCGGGCATGCTGGAAATAGTGTaGGTAGTTGCGCAGAAGCAATGGCACACTTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: HVERVSGMLEIV*VVAQKQWHTCV Trigger: CACACAAGTGTGCCATTGCTTCTGCGCAACTACTCACACTATTTCCAGCATGCCCGAGACACGCTCTACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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| CDS GCA 72 bp | GCGTGTCTCGGGCATGCTGGAAATAGTGTGAGTAGTTaGGCAGAAGCAATGGCACACTTGTGTGAGAGATCA | + |
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Preference number: 6 (lower is better) Translates to: ACLGHAGNSVSS*AEAMAHLCERS Trigger: TGATCTCTCACACAAGTGTGCCATTGCTTCTGCGCAACTACTCACACTATTTCCAGCATGCCCGAGACACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102818.11 ENSMUST00000179989.2 |
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