Pregenerated sensors for ST6GALNAC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057286, ENSMUSG00000110170Ensembl transcript IDs: ENSMUST00000079545.6, ENSMUST00000144398.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTACTTTGGGGTCAGCGTTGGTACAGCCAAAGGATGCCGGCGTTGTaGAGGTCTCGCCATAGCGAAGCTTCCAGGGACAGGTCGTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: VLWGQRWYSQRMPAL*RSRHSEASRDRSWF Trigger: AAACCACGACCTGTCCCTGGAAGCTTCGCTATGGCGAGACCTGCACAACGCCGGCATCCTTTGGCTGTACCAACGCTGACCCCAAAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| 3UTR GCA 90 bp | ACAGAAATCCGGTACTTTGGGGTCAGCGTTGGTACAGCCAAAGGATaGCGGCGTTGTGCAGGTCTCGCCATAGCGAAGCTTCCAGGGACA | + |
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Preference number: 1 (lower is better) Translates to: TEIRYFGVSVGTAKG*RRCAGLAIAKLPGT Trigger: TGTCCCTGGAAGCTTCGCTATGGCGAGACCTGCACAACGCCGGCATCCTTTGGCTGTACCAACGCTGACCCCAAAGTACCGGATTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| 3UTR GCA 90 bp | TCTGATGGAGTCCGTCAAAAGGTAGGACAGCCATTCGACTCCTGCTaGAAGAGGCTGTGGTTTTTACGGCTAACCAACTCCCAGGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: SDGVRQKVGQPFDSC*KRLWFLRLTNSQAD Trigger: GTCAGCCTGGGAGTTGGTTAGCCGTAAAAACCACAGCCTCTTGCAGCAGGAGTCGAATGGCTGTCCTACCTTTTGACGGACTCCATCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR TCA 90 bp | TGGAAAAGCTCATTGGACTGCATCAGGTGCTGTTTATTGAAGCTGTaGAGTGAGGGTCCATCACTCAGTTTCCTGTTGGTGACAAGGACT | + |
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Preference number: 1 (lower is better) Translates to: WKSSLDCIRCCLLKL*SEGPSLSFLLVTRT Trigger: AGTCCTTGTCACCAACAGGAAACTGAGTGATGGACCCTCACTTCACAGCTTCAATAAACAGCACCTGATGCAGTCCAATGAGCTTTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR TCA 90 bp | TTGGACTACTTAGCTCTGAGATGTGCCTGCCCGCCTGTTTGCTGGTaGGCATCATTGTCTCATTTAATGTTCAGTTTTAAAACGAATCCT | + |
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Preference number: 1 (lower is better) Translates to: LDYLALRCACPPVCW*ASLSHLMFSFKTNP Trigger: AGGATTCGTTTTAAAACTGAACATTAAATGAGACAATGATGCTCACCAGCAAACAGGCGGGCAGGCACATCTCAGAGCTAAGTAGTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR CAA 90 bp | CCGGTACTTTGGGGTCAGCGTTGGTACAGCCAAAGGATGCCGGCGTaGTGCAGGTCTCGCCATAGCGAAGCTTCCAGGGACAGGTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: PVLWGQRWYSQRMPA*CRSRHSEASRDRSW Trigger: CCACGACCTGTCCCTGGAAGCTTCGCTATGGCGAGACCTGCACAACGCCGGCATCCTTTGGCTGTACCAACGCTGACCCCAAAGTACCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCTGGAGGGCACAGGCTACTCTTGCAGAACACCTGGGTTCAATTGCCAGCACAACCAACTCCCAGGCTaGCTTGCTCTGTACCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: VLEGTGYSCRTPGFNCQHNQLPG*LALYPR Trigger: TCTGGGGTACAGAGCAAGTCAGCCTGGGAGTTGGTT...GTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTAGCCTGTGCCCTCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR CAA 90 bp | CAGTTTTCCCAAGCCACAGAACCAATGGTCGGCCGGTCCTCAGCTTaGGTGAGTTGGCCAGTGTGGGTGGGCTGTTTTGAGGTTATCTGG | + |
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Preference number: 2 (lower is better) Translates to: QFSQATEPMVGRSSA*VSWPVWVGCFEVIW Trigger: CCAGATAACCTCAAAACAGCCCACCCACACTGGCCAACTCACCAAAGCTGAGGACCGGCCGACCATTGGTTCTGTGGCTTGGGAAAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGCACAGGCTACTCTTGCAGAACACCTGGGTTCAATTGCCAGCACCTACAAGTACTGGGAATAAGTaGGCTGACCACCACTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GGHRLLLQNTWVQLPAPTSTGNK*ADHHSQ Trigger: CTGGGAGTGGTGGTCAGCGCACTTATTCCCAGTACT...TGTAGGTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTAGCCTGTGCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR TCA 90 bp | AGCCGAGAAAAGCATTTCTCACAGTGGATTTCCTGGAAGTCAGGGTTGGCCTTTCACCAAACTCTGTCCTaGGTGCCGCCACACCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SREKHFSQWISWKSGLAFHQTLS*VPPHPF Trigger: GAAGGGGTGTGGCGGCACTCAGGACAGAGTTTGGTG...AAAGGCCAACCCTGACTTCCAGGAAATCCACTGTGAGAAATGCTTTTCTCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR TCA 90 bp | TTTGTTCTGCAAGAGGAGCCAGTAAGGCCTCGTGACTGTGGTCACCCTCGGAAGGTGGGTGGGCTGTTTTaGGGTTATCTGGTCCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: FVLQEEPVRPRDCGHPRKVGGLF*GYLVLS Trigger: ACTAAGGACCAGATAACCTCAAAACAGCCCACCCAC...CTTCCGAGGGTGACCACAGTCACGAGGCCTTACTGGCTCCTCTTGCAGAACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGGAGGGCACAGGCTACTCTTGCAGAACACCTGGGTTCAATTGCCAGCACGGACACTCATGTGTCTaGACATTTGATGGGGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: VLEGTGYSCRTPGFNCQHGHSCV*TFDGEC Trigger: ACACTCCCCATCAAATGTGCAGACACATGAGTGTCC...GTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTAGCCTGTGCCCTCCAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR GCA 90 bp | CCTACAAAGCAGTCTTCCCTCCCTCGGCTAAGCCTCAGAAGAGTTGTCTTGACCGGCCAAGGGGAGTGTTaGCTCTTCCAGAAGTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: PTKQSSLPRLSLRRVVLTGQGEC*LFQKLK Trigger: TTTCAACTTCTGGAAGAGGCAACACTCCCCTTGGCC...GGTCAAGACAACTCTTCTGAGGCTTAGCCGAGGGAGGGAAGACTGCTTTGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTCTGCAAGAGGAGCCAGTAAGGCCTCGTGACTGTGGTCACCCTCGGAAGCCAGACACACCACCTTaGAGTTTGTGTCTTCTACTC | + |
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Preference number: 2 (lower is better) Translates to: FVLQEEPVRPRDCGHPRKPDTPP*SLCLLL Trigger: GAGTAGAAGACACAAACTCCAAGGTGGTGTGTCTGG...CTTCCGAGGGTGACCACAGTCACGAGGCCTTACTGGCTCCTCTTGCAGAACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR CAA 90 bp | GCTGCTGCTCCTGCCTTTAATTTCCCAAAGAGTCATCAGACGACCTaGGAGTTTGTTCTGCAAGAGGAGCCAGTAAGGCCTCGTGACTGT | + |
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Preference number: 2 (lower is better) Translates to: AAAPAFNFPKSHQTT*EFVLQEEPVRPRDC Trigger: ACAGTCACGAGGCCTTACTGGCTCCTCTTGCAGAACAAACTCCAAGGTCGTCTGATGACTCTTTGGGAAATTAAAGGCAGGAGCAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR TCA 90 bp | TTTGTTCTGCAAGAGGAGCCAGTAAGGCCTCGTGACTGTGGTCACCCTCGGAAGTGTTTATTGAAGCTGTaGAGTGAGGGTCCATCACTC | + |
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Preference number: 2 (lower is better) Translates to: FVLQEEPVRPRDCGHPRKCLLKL*SEGPSL Trigger: GAGTGATGGACCCTCACTTCACAGCTTCAATAAACA...CTTCCGAGGGTGACCACAGTCACGAGGCCTTACTGGCTCCTCTTGCAGAACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR TCA 90 bp | TACTCTTGCAGAACACCTGGGTTCAATTGCCAGCACCTACATGGTGCTCAGAGCATTGAAGCTGTGAAGTaGGGGTCCATCACTCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: YSCRTPGFNCQHLHGAQSIEAVK*GSITQF Trigger: AAACTGAGTGATGGACCCTCACTTCACAGCTTCAAT...GCTCTGAGCACCATGTAGGTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR GCA 90 bp | TACTCTTGCAGAACACCTGGGTTCAATTGCCAGCACCTACATGGTGCTCAGAGCATTTGGGACTCAACATaGCATTGGTTTCAGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: YSCRTPGFNCQHLHGAQSIWDST*HWFQLC Trigger: GCAGAGCTGAAACCAATGGCATGTTGAGTCCCAAAT...GCTCTGAGCACCATGTAGGTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR GCA 90 bp | GTTAGATGCCCTAGGCTGGTCTGTTCGCCCTTCCTGAGTACTGGGAATAAGTGCCTTCAGCTTAGGGGCTaGATGATAATTTGGTTGGAT | + |
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Preference number: 2 (lower is better) Translates to: VRCPRLVCSPFLSTGNKCLQLRG*MIIWLD Trigger: ATCCAACCAAATTATCATGCAGCCCCTAAGCTGAAG...GCACTTATTCCCAGTACTCAGGAAGGGCGAACAGACCAGCCTAGGGCATCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR TCA 90 bp | CAGAAATCCGGTACTTTGGGGTCAGCGTTGGTACAGCCAAAGGATGCCGGCGTTTTCGAAATAGTGGTCTaGGTATTTCTGGTAGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: QKSGTLGSALVQPKDAGVFEIVV*VFLVVV Trigger: AACAACTACCAGAAATACTCAGACCACTATTTCGAA...AACGCCGGCATCCTTTGGCTGTACCAACGCTGACCCCAAAGTACCGGATTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAAACTACATTCTGCCTCTGTTTCTCATCCTCTATCAGGAGGCAGAAGTGTCATCAATGTTTCTAGTTaGCCAGGGCCAGGTGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: FKLHSASVSHPLSGGRSVINVSS*PGPGAG Trigger: GCCAGCACCTGGCCCTGGGCAACTAGAAACATTGAT...GACACTTCTGCCTCCTGATAGAGGATGAGAAACAGAGGCAGAATGTAGTTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR GCA 90 bp | GGCTACTCTTGCAGAACACCTGGGTTCAATTGCCAGCACCTACATGGTGCTCAGCTTCAAACTACATTCTaGCTCTGTTTCTCATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: GYSCRTPGFNCQHLHGAQLQTTF*LCFSSS Trigger: AGAGGATGAGAAACAGAGGCAGAATGTAGTTTGAAG...CTGAGCACCATGTAGGTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR CCA 90 bp | TACTCTTGCAGAACACCTGGGTTCAATTGCCAGCACCTACATGGTGCTCAGAGCATGAGACTGGAAATGTaGAAAAGCTCATTGGACTGC | + |
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Preference number: 2 (lower is better) Translates to: YSCRTPGFNCQHLHGAQSMRLEM*KSSLDC Trigger: GCAGTCCAATGAGCTTTTCCACATTTCCAGTCTCAT...GCTCTGAGCACCATGTAGGTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTTCAGGTTCTTTCCTTGTTTCTAGGTTATTGCCCTGTAGTGCCAGAGAGCCATTCGACTCCTGCTaGAAGAGGCTGTGGTTTTTA | + |
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Preference number: 2 (lower is better) Translates to: SPSGSFLVSRLLPCSAREPFDSC*KRLWFL Trigger: TAAAAACCACAGCCTCTTGCAGCAGGAGTCGAATGG...CTCTCTGGCACTACAGGGCAATAACCTAGAAACAAGGAAAGAACCTGAAGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR TCA 90 bp | TCCCGTGCTAGGCATATACATGTCTCCAAATCGTGTGTTAATCAGCTTGGATTTCTGGGTGCAGGAGCTTaGATTTACTGGCAGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: SRARHIHVSKSCVNQLGFLGAGA*IYWQRF Trigger: AAACCTCTGCCAGTAAATTCAAGCTCCTGCACCCAG...AAATCCAAGCTGATTAACACACGATTTGGAGACATGTATATGCCTAGCACGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCTAGGCATATACATGTCTCCAAATCGTGTGTTAATCAGCTTGGATTTCAGACTGATGAAGTCTGGGTaGAGGAGCTTGAATTTACTG | + |
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Preference number: 2 (lower is better) Translates to: VLGIYMSPNRVLISLDFRLMKSG*RSLNLL Trigger: CAGTAAATTCAAGCTCCTGCACCCAGACTTCATCAG...TCTGAAATCCAAGCTGATTAACACACGATTTGGAGACATGTATATGCCTAGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| 3UTR GCA 72 bp | AACCTCGGTGCAGGTGCCACCAAACTCTGTCCTGAGTaGCGCCACACCCCTTCCCTCCAGACACACCACCTT | + |
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Preference number: 3 (lower is better) Translates to: NLGAGATKLCPE*RHTPSLQTHHL Trigger: AAGGTGGTGTGTCTGGAGGGAAGGGGTGTGGCGGCACTCAGGACAGAGTTTGGTGGCACCTGCACCGAGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR GCA 72 bp | GGTCAGCGTTGGTACAGCCAAAGGATGCCGGCGTTGTaGAGGTCTCGCCATAGCGAAGCTTCCAGGGACAGG | + |
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Preference number: 3 (lower is better) Translates to: GQRWYSQRMPAL*RSRHSEASRDR Trigger: CCTGTCCCTGGAAGCTTCGCTATGGCGAGACCTGCACAACGCCGGCATCCTTTGGCTGTACCAACGCTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGGTGAGGGCGCTCAGTCGGAGGCCCTGGGGAGGCCCCTGCTAAGCCGAGAAACAAAGTTTGTCTCTTaGGTGCTAGGTACTCCTAGC | + |
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Preference number: 3 (lower is better) Translates to: AGEGAQSEALGRPLLSRETKFVS*VLGTPS Trigger: GCTAGGAGTACCTAGCACCAAAGAGACAAACTTTGT...TTCTCGGCTTAGCAGGGGCCTCCCCAGGGCCTCCGACTGAGCGCCCTCACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR GCA 72 bp | CGGTACTTTGGGGTCAGCGTTGGTACAGCCAAAGGATaGCGGCGTTGTGCAGGTCTCGCCATAGCGAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: RYFGVSVGTAKG*RRCAGLAIAKL Trigger: AAGCTTCGCTATGGCGAGACCTGCACAACGCCGGCATCCTTTGGCTGTACCAACGCTGACCCCAAAGTACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| 3UTR TCA 72 bp | CTGTTAGATGCCCTAGGCTGGTCTGTTCGCCCTTCCTaGGTACTGGGAATAAGTGCGCTGACCACCACTCCC | + |
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Preference number: 3 (lower is better) Translates to: LLDALGWSVRPS*VLGISALTTTP Trigger: GGGAGTGGTGGTCAGCGCACTTATTCCCAGTACTCAGGAAGGGCGAACAGACCAGCCTAGGGCATCTAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR GCA 72 bp | CTGGTCTGTTCGCCCTTCCTGAGTACTGGGAATAAGTaGGCTGACCACCACTCCCAGCTGTCACCAGCAGTT | + |
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Preference number: 3 (lower is better) Translates to: LVCSPFLSTGNK*ADHHSQLSPAV Trigger: AACTGCTGGTGACAGCTGGGAGTGGTGGTCAGCGCACTTATTCCCAGTACTCAGGAAGGGCGAACAGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR CCA 72 bp | GTCGGCCGGTCCTCAGCTTTGGTGAGTTGGCCAGTGTaGGTGGGCTGTTTTGAGGTTATCTGGTCCTTAGTC | + |
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Preference number: 3 (lower is better) Translates to: VGRSSALVSWPV*VGCFEVIWSLV Trigger: GACTAAGGACCAGATAACCTCAAAACAGCCCACCCACACTGGCCAACTCACCAAAGCTGAGGACCGGCCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR TCA 72 bp | GGGTCCATCACTCAGTTTCCTGTTGGTGACAAGGACTaGTGTGCCTCTCCAGTGAGACTCGTCAGTGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: GSITQFPVGDKD*CASPVRLVSGG Trigger: GCCACCACTGACGAGTCTCACTGGAGAGGCACATCAGTCCTTGTCACCAACAGGAAACTGAGTGATGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR GCA 72 bp | AAAGTTAGCAGCCTGCTTCTGAACTTGGCTGGTGCCTaGCTGTGTGTAGCGCACACAGTGCCTTGTGATGGC | + |
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Preference number: 3 (lower is better) Translates to: KVSSLLLNLAGA*LCVAHTVPCDG Trigger: GCCATCACAAGGCACTGTGTGCGCTACACACAGGCAGGCACCAGCCAAGTTCAGAAGCAGGCTGCTAACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR CCA 72 bp | TGTGCTGGAGGGCACAGGCTACTCTTGCAGAACACCTaGGTTCAATTGCCAGCACCTACATGGTGCTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: CAGGHRLLLQNT*VQLPAPTWCSE Trigger: CTCTGAGCACCATGTAGGTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTAGCCTGTGCCCTCCAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR CCA 72 bp | TTGAGGCACAGAAATCCGGTACTTTGGGGTCAGCGTTaGTACAGCCAAAGGATGCCGGCGTTGTGCAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: LRHRNPVLWGQR*YSQRMPALCRS Trigger: AGACCTGCACAACGCCGGCATCCTTTGGCTGTACCAACGCTGACCCCAAAGTACCGGATTTCTGTGCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| 3UTR GCA 72 bp | TCCGGTGGTAATGTGCTGGAGGGCACAGGCTACTCTTaGAGAACACCTGGGTTCAATTGCCAGCACCTACAT | + |
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Preference number: 3 (lower is better) Translates to: SGGNVLEGTGYS*RTPGFNCQHLH Trigger: ATGTAGGTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTAGCCTGTGCCCTCCAGCACATTACCACCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR CCA 72 bp | GTAGGACAGCCATTCGACTCCTGCTGCAAGAGGCTGTaGTTTTTACGGCTAACCAACTCCCAGGCTGACTTG | + |
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Preference number: 3 (lower is better) Translates to: VGQPFDSCCKRL*FLRLTNSQADL Trigger: CAAGTCAGCCTGGGAGTTGGTTAGCCGTAAAAACCACAGCCTCTTGCAGCAGGAGTCGAATGGCTGTCCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR CAA 90 bp | AGGCTGGTCTGTTCGCCCTTCCTGAGTACTGGGAATAAGTGCGCTGACCACCACGAATGGCTTTGGCATTaGGGACTCAACATGCCATTG | + |
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Preference number: 3 (lower is better) Translates to: RLVCSPFLSTGNKCADHHEWLWH*GLNMPL Trigger: CAATGGCATGTTGAGTCCCAAATGCCAAAGCCATTC...GTGGTGGTCAGCGCACTTATTCCCAGTACTCAGGAAGGGCGAACAGACCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR TCA 72 bp | GGTCTACGGGTAGTCTGCAGAACTGACAGGGCTATCTaGTGGAGTCCGTCAAAAGGTAGGACAGCCATTCGA | + |
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Preference number: 3 (lower is better) Translates to: GLRVVCRTDRAI*WSPSKGRTAIR Trigger: TCGAATGGCTGTCCTACCTTTTGACGGACTCCATCAGATAGCCCTGTCAGTTCTGCAGACTACCCGTAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR GCA 72 bp | TGGATAGCCCTGAGTGGTTCCATCAATGTTTCTAGTTaGCCAGGGCCAGGTGCTGGCTTTGGACTACTTAGC | + |
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Preference number: 3 (lower is better) Translates to: WIALSGSINVSS*PGPGAGFGLLS Trigger: GCTAAGTAGTCCAAAGCCAGCACCTGGCCCTGGGCAACTAGAAACATTGATGGAACCACTCAGGGCTATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR GCA 72 bp | TACCCAGTCCCCGTCCCAGCCCTTCAGCTTAGGGGCTaGATGATAATTTGGTTGGATGAGACTGGAAATGTG | + |
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Preference number: 3 (lower is better) Translates to: YPVPVPALQLRG*MIIWLDETGNV Trigger: CACATTTCCAGTCTCATCCAACCAAATTATCATGCAGCCCCTAAGCTGAAGGGCTGGGACGGGGACTGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR GCA 72 bp | GTCCGTCAAAAGGTAGGACAGCCATTCGACTCCTGCTaGAAGAGGCTGTGGTTTTTACGGCTAACCAACTCC | + |
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Preference number: 3 (lower is better) Translates to: VRQKVGQPFDSC*KRLWFLRLTNS Trigger: GGAGTTGGTTAGCCGTAAAAACCACAGCCTCTTGCAGCAGGAGTCGAATGGCTGTCCTACCTTTTGACGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR CAA 90 bp | GGCTACTCTTGCAGAACACCTGGGTTCAATTGCCAGCACCTACATGGTGCTCAGAGCCACCATTGCCACTaGGGCTTGGTTTTAGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: GYSCRTPGFNCQHLHGAQSHHCH*GLVLVC Trigger: ACAGACTAAAACCAAGCCCAAGTGGCAATGGTGGCT...CTGAGCACCATGTAGGTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR CAA 90 bp | GGCTACTCTTGCAGAACACCTGGGTTCAATTGCCAGCACCTACATGGTGCTCAGCATGTGTCTGCACATTaGATGGGGAGTGTACTGAGG | + |
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Preference number: 3 (lower is better) Translates to: GYSCRTPGFNCQHLHGAQHVSAH*MGSVLR Trigger: CCTCAGTACACTCCCCATCAAATGTGCAGACACATG...CTGAGCACCATGTAGGTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR-3UTR CAA 90 bp | TACTTTGGGGTCAGCGTTGGTACAGCCAAAGGATGCCGGCGTTGTGCAGGTCTCCGTGTGTTAATCAGCTaGGATTTCAGAAACCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: YFGVSVGTAKGCRRCAGLRVLIS*DFRNLS Trigger: AGAGAGGTTTCTGAAATCCAAGCTGATTAACACACG...GAGACCTGCACAACGCCGGCATCCTTTGGCTGTACCAACGCTGACCCCAAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| 3UTR TCA 72 bp | TGTGAAGTGAGGGTCCATCACTCAGTTTCCTGTTGGTaGCAAGGACTGATGTGCCTCTCCAGTGAGACTCGT | + |
|
Preference number: 3 (lower is better) Translates to: CEVRVHHSVSCW*QGLMCLSSETR Trigger: ACGAGTCTCACTGGAGAGGCACATCAGTCCTTGTCACCAACAGGAAACTGAGTGATGGACCCTCACTTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR CCA 72 bp | GTATTATGTGACGGGTCTTGTCTCAATACCCTCTGTTaGGAAGTAGAGGGCCAAGGGGAGTGTTGCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VLCDGSCLNTLC*EVEGQGECCLF Trigger: GAAGAGGCAACACTCCCCTTGGCCCTCTACTTCCCAACAGAGGGTATTGAGACAAGACCCGTCACATAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR-3UTR CAA 90 bp | GTTAGATGCCCTAGGCTGGTCTGTTCGCCCTTCCTGAGTACTGGGAATAAGTGCCTAAGGTGTTCTAGGTaGAATGGCTTTGGCATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VRCPRLVCSPFLSTGNKCLRCSR*NGFGIW Trigger: CCAAATGCCAAAGCCATTCAACCTAGAACACCTTAG...GCACTTATTCCCAGTACTCAGGAAGGGCGAACAGACCAGCCTAGGGCATCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR TCA 72 bp | CCCTCGGCTAAGCCTCAGAAGAGTTGTCTTGACCTGTaGCAGTGTCGTGCATTGAACAGGCTCTGGTATTAT | + |
|
Preference number: 3 (lower is better) Translates to: PSAKPQKSCLDL*QCRALNRLWYY Trigger: ATAATACCAGAGCCTGTTCAATGCACGACACTGTCACAGGTCAAGACAACTCTTCTGAGGCTTAGCCGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR TCA 72 bp | TTCCTGTTGGTGACAAGGACTGATGTGCCTCTCCAGTaGGACTCGTCAGTGGTGGCGACTTACACAAAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FLLVTRTDVPLQ*DSSVVATYTKF Trigger: AAACTTTGTGTAAGTCGCCACCACTGACGAGTCTCACTGGAGAGGCACATCAGTCCTTGTCACCAACAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGCGCTCCCGTGCTAGGCATATACATGTCTCCAAATCGTGTGTTAATCAGCTCTGGGTGCAGGAGCTaGAATTTACTGGCAGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: MSAPVLGIYMSPNRVLISSGCRS*NLLAEV Trigger: AACCTCTGCCAGTAAATTCAAGCTCCTGCACCCAGA...GCTGATTAACACACGATTTGGAGACATGTATATGCCTAGCACGGGAGCGCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| 3UTR TCA 72 bp | GGACTGCATCAGGTGCTGTTTATTGAAGCTGTGAAGTaGGGGTCCATCACTCAGTTTCCTGTTGGTGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLHQVLFIEAVK*GSITQFPVGDK Trigger: CTTGTCACCAACAGGAAACTGAGTGATGGACCCTCACTTCACAGCTTCAATAAACAGCACCTGATGCAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR GCA 72 bp | TCTAGGTTGAATGGCTTTGGCATTTGGGACTCAACATaGCATTGGTTTCAGCTCTGCTCGATCGAGGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SRLNGFGIWDST*HWFQLCSIEVP Trigger: AGGAACCTCGATCGAGCAGAGCTGAAACCAATGGCATGTTGAGTCCCAAATGCCAAAGCCATTCAACCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR CCA 72 bp | AGGCCCCTGCTAAGCCGAGAAAAGCATTTCTCACAGTaGATTTCCTGGAAGTCAGGGTTGGCCTTTGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: RPLLSREKHFSQ*ISWKSGLAFVF Trigger: AAATACAAAGGCCAACCCTGACTTCCAGGAAATCCACTGTGAGAAATGCTTTTCTCGGCTTAGCAGGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCTTCAGGTTCTTTCCTTGTTTCTAGGTTATTGCCCTGTAGTGCCAGAGAGAGATGGAAGCCACCATaGCCACTTGGGCTTGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SPSGSFLVSRLLPCSARERWKPP*PLGLGF Trigger: AAAACCAAGCCCAAGTGGCAATGGTGGCTTCCATCT...CTCTCTGGCACTACAGGGCAATAACCTAGAAACAAGGAAAGAACCTGAAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCTTCAGGTTCTTTCCTTGTTTCTAGGTTATTGCCCTGTAGTGCCAGAGAGTCCAGACACACCACCTaGGAGTTTGTGTCTTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: SPSGSFLVSRLLPCSARESRHTT*EFVSST Trigger: AGTAGAAGACACAAACTCCAAGGTGGTGTGTCTGGA...CTCTCTGGCACTACAGGGCAATAACCTAGAAACAAGGAAAGAACCTGAAGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR TCA 72 bp | TCATTGGACTGCATCAGGTGCTGTTTATTGAAGCTGTaGAGTGAGGGTCCATCACTCAGTTTCCTGTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLDCIRCCLLKL*SEGPSLSFLLV Trigger: CACCAACAGGAAACTGAGTGATGGACCCTCACTTCACAGCTTCAATAAACAGCACCTGATGCAGTCCAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR TCA 72 bp | GGAAAAGCTCATTGGACTGCATCAGGTGCTGTTTATTaGAGCTGTGAAGTGAGGGTCCATCACTCAGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GKAHWTASGAVY*SCEVRVHHSVS Trigger: GGAAACTGAGTGATGGACCCTCACTTCACAGCTTCAATAAACAGCACCTGATGCAGTCCAATGAGCTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR GCA 72 bp | CTTAAATGGAGCATTGGTAAAGGACACTCATGTGTCTaGACATTTGATGGGGAGTGTACTGAGGGTCTACGG | + |
|
Preference number: 3 (lower is better) Translates to: LKWSIGKGHSCV*TFDGECTEGLR Trigger: CCGTAGACCCTCAGTACACTCCCCATCAAATGTGCAGACACATGAGTGTCCTTTACCAATGCTCCATTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR CCA 72 bp | GTCCCAGCCCTTCAGCTTAGGGGCTGCATGATAATTTaGTTGGATGAGACTGGAAATGTGGAAAAGCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: VPALQLRGCMII*LDETGNVEKLI Trigger: AATGAGCTTTTCCACATTTCCAGTCTCATCCAACCAAATTATCATGCAGCCCCTAAGCTGAAGGGCTGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGAAATGTGGAAAAGCTCATTGGACTGCATCAGGTGCTGTTTATTGAAGCTTCACTCAGTTTCCTGTaGGTGACAAGGACTGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: TGNVEKLIGLHQVLFIEASLSFL*VTRTDV Trigger: CACATCAGTCCTTGTCACCAACAGGAAACTGAGTGA...AGCTTCAATAAACAGCACCTGATGCAGTCCAATGAGCTTTTCCACATTTCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR TCA 72 bp | TTAGCTCTGAGATGTGCCTGCCCGCCTGTTTGCTGGTaGGCATCATTGTCTCATTTAATGTTCAGTTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LALRCACPPVCW*ASLSHLMFSFK Trigger: TTTAAAACTGAACATTAAATGAGACAATGATGCTCACCAGCAAACAGGCGGGCAGGCACATCTCAGAGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR CCA 72 bp | AGCATTTCTCACAGTGGATTTCCTGGAAGTCAGGGTTaGCCTTTGTATTTTGAAGCACAAATAAACTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: SISHSGFPGSQG*PLYFEAQINFI Trigger: TATAAAGTTTATTTGTGCTTCAAAATACAAAGGCCAACCCTGACTTCCAGGAAATCCACTGTGAGAAATGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGAGGGCGCTCAGTCGGAGGCCCTGGGGAGGCCCCTGCTAAGCCGAGAAGAGGCAATGACTTCGTaGGAGAGCCCCTGCCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: AGEGAQSEALGRPLLSREEAMTS*ESPCHP Trigger: CGGATGGCAGGGGCTCTCCCACGAAGTCATTGCCTC...TTCTCGGCTTAGCAGGGGCCTCCCCAGGGCCTCCGACTGAGCGCCCTCACCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| CDS-3UTR TCA 90 bp | CTGGTCACAGGTGTGCAAGGCTGTCAGCAGCATGAGCGCTCCCGTGCTAGGCATGGAAGGGGAAGGGGCTaGGCCTCCAGAGCTAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVTGVQGCQQHERSRARHGRGRG*ASRARG Trigger: CCCCCTAGCTCTGGAGGCTCAGCCCCTTCCCCTTCC...ATGCCTAGCACGGGAGCGCTCATGCTGCTGACAGCCTTGCACACCTGTGACCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTCACAGGTGTGCAAGGCTGTCAGCAGCATGAGCGCTCCCGTGCTAGGCATCTGGATTGCTGGGCCTaGCACGGGAAAGGGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVTGVQGCQQHERSRARHLDCWA*HGKGQG Trigger: CCCCTGCCCTTTCCCGTGCCAGGCCCAGCAATCCAG...ATGCCTAGCACGGGAGCGCTCATGCTGCTGACAGCCTTGCACACCTGTGACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGAGGGCGCTCAGTCGGAGGCCCTGGGGAGGCCCCTGCTAAGCCGAGAACCGAATTCGGTGGTTTaGGGTCAAAGAATGCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGEGAQSEALGRPLLSREPNSVV*GQRMLV Trigger: CACGAGCATTCTTTGACCCCAAACCACCGAATTCGG...TTCTCGGCTTAGCAGGGGCCTCCCCAGGGCCTCCGACTGAGCGCCCTCACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| CDS-3UTR CCA 90 bp | ATGCCGGCGTTGTGCAGGTCTCGCCATAGCGAAGCTTCCAGGGACAGGTCGTGGAGATCGAGACTGGGATaGGGACTGGGTTGGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: MPALCRSRHSEASRDRSWRSRLG*GLGWGW Trigger: CCATCCCCAACCCAGTCCCCATCCCAGTCTCGATCT...CCACGACCTGTCCCTGGAAGCTTCGCTATGGCGAGACCTGCACAACGCCGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| 3UTR CAA 72 bp | TGGGGTCAGCGTTGGTACAGCCAAAGGATGCCGGCGTaGTGCAGGTCTCGCCATAGCGAAGCTTCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WGQRWYSQRMPA*CRSRHSEASRD Trigger: GTCCCTGGAAGCTTCGCTATGGCGAGACCTGCACAACGCCGGCATCCTTTGGCTGTACCAACGCTGACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR CCA 90 bp | CGTTGTGCAGGTCTCGCCATAGCGAAGCTTCCAGGGACAGGTCGTGGTTTGCGTGATGTGTGGAGGGGGTaGCAGGAGGGGGAAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RCAGLAIAKLPGTGRGLRDVWRG*QEGEVG Trigger: ACCTACTTCCCCCTCCTGCCACCCCCTCCACACATC...ACGCAAACCACGACCTGTCCCTGGAAGCTTCGCTATGGCGAGACCTGCACAACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCGGTGGTAATGTGCTGGAGGGCACAGGCTACTCTTGCAGAACACCTGGGCAGGCACACCCAGGATaGCGGATCTCAGCATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSGGNVLEGTGYSCRTPGQAHPG*RISASG Trigger: ACCTGATGCTGAGATCCGCCATCCTGGGTGTGCCTG...CCCAGGTGTTCTGCAAGAGTAGCCTGTGCCCTCCAGCACATTACCACCGGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| CDS-3UTR CCA 90 bp | GTACTTTGGGGTCAGCGTTGGTACAGCCAAAGGATGCCGGCGTTGTGCAGGTCTGTAGGAGAGGGAGGATaGGGGTGTGAACAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLWGQRWYSQRMPALCRSVGEGG*GCEQGW Trigger: CCAGCCCTGTTCACACCCCCATCCTCCCTCTCCTAC...AGACCTGCACAACGCCGGCATCCTTTGGCTGTACCAACGCTGACCCCAAAGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGTCTGTTCGCCCTTCCTGAGTACTGGGAATAAGTGCGCTGACCACCACTCCAGAGTTCCTGAGTaGAGAGGCCCTCCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLVCSPFLSTGNKCADHHSRVPE*RGPPTA Trigger: TGCTGTGGGAGGGCCTCTTCACTCAGGAACTCTGGA...GTGGTGGTCAGCGCACTTATTCCCAGTACTCAGGAAGGGCGAACAGACCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| CDS-3UTR TCA 90 bp | CAGCTTGGATTTCAGAAACCTCTCTGTCAGGTAGCTGATGAAGTCTGGGTGCAGGCCGGGGTAGGGTTGTaGGAGGTTGGGCGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLGFQKPLCQVADEVWVQAGVGL*EVGREE Trigger: CTCCTCCCGCCCAACCTCTCACAACCCTACCCCGGC...CTGCACCCAGACTTCATCAGCTACCTGACAGAGAGGTTTCTGAAATCCAAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGTCTGTTCGCCCTTCCTGAGTACTGGGAATAAGTGCGCTGACCACCACAGGATGCCGGCGTTGTaGAGGTCTCGCCATAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLVCSPFLSTGNKCADHHRMPAL*RSRHSE Trigger: TTCGCTATGGCGAGACCTGCACAACGCCGGCATCCT...GTGGTGGTCAGCGCACTTATTCCCAGTACTCAGGAAGGGCGAACAGACCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| CDS-3UTR CCA 90 bp | CGTTGTGCAGGTCTCGCCATAGCGAAGCTTCCAGGGACAGGTCGTGGTTTGCGTTGGTTAGATCGAGACTaGGATGGGGACTGGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCAGLAIAKLPGTGRGLRWLDRD*DGDWVG Trigger: CCCAACCCAGTCCCCATCCCAGTCTCGATCTAACCA...ACGCAAACCACGACCTGTCCCTGGAAGCTTCGCTATGGCGAGACCTGCACAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| 3UTR CAA 72 bp | CAAGCCACAGAACCAATGGTCGGCCGGTCCTCAGCTTaGGTGAGTTGGCCAGTGTGGGTGGGCTGTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QATEPMVGRSSA*VSWPVWVGCFE Trigger: CTCAAAACAGCCCACCCACACTGGCCAACTCACCAAAGCTGAGGACCGGCCGACCATTGGTTCTGTGGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| CDS-3UTR TCA 90 bp | GGAGGGCACAGGCTACTCTTGCAGAACACCTGGGTTCAATTGCCAGCACCTACACTTGTGGCACAGAGGTaGAGCCCAGTTTGGCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGHRLLLQNTWVQLPAPTLVAQR*SPVWRR Trigger: CCTACGCCAAACTGGGCTTCACCTCTGTGCCACAAG...TGTAGGTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTAGCCTGTGCCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| CDS-3UTR CCA 90 bp | AGCAGCATGAGCGCTCCCGTGCTAGGCATATACATGTCTCCAAATCGTGTGTTACCTCGGGGCACATGCTaGACGTGGGGACTGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSMSAPVLGIYMSPNRVLPRGTC*TWGLGD Trigger: GTCTCCCAGTCCCCACGTCCAGCATGTGCCCCGAGG...TAACACACGATTTGGAGACATGTATATGCCTAGCACGGGAGCGCTCATGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR CCA 90 bp | CGTTGTGCAGGTCTCGCCATAGCGAAGCTTCCAGGGACAGGTCGTGGTTTGCGTGTAGAAGCGGGAGAATaGGGTATAGAAGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCAGLAIAKLPGTGRGLRVEAGE*GIEGGW Trigger: CCAGCCACCTTCTATACCCCATTCTCCCGCTTCTAC...ACGCAAACCACGACCTGTCCCTGGAAGCTTCGCTATGGCGAGACCTGCACAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR GCA 90 bp | CCTACAAAGCAGTCTTCCCTCCCTCGGCTAAGCCTCAGAAGAGTTGTCTTGACCGGTACAGCCAAAGGATaGCGGCGTTGTGCAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTKQSSLPRLSLRRVVLTGTAKG*RRCAGL Trigger: GAGACCTGCACAACGCCGGCATCCTTTGGCTGTACC...GGTCAAGACAACTCTTCTGAGGCTTAGCCGAGGGAGGGAAGACTGCTTTGTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| 3UTR CAA 72 bp | TTTGAGGCACAGAAATCCGGTACTTTGGGGTCAGCGTaGGTACAGCCAAAGGATGCCGGCGTTGTGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FEAQKSGTLGSA*VQPKDAGVVQV Trigger: GACCTGCACAACGCCGGCATCCTTTGGCTGTACCAACGCTGACCCCAAAGTACCGGATTTCTGTGCCTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGCGCTCCCGTGCTAGGCATATACATGTCTCCAAATCGTGTGTTAATCAGCGCTGGACGTGGGGACTaGGAGACTGGGAGGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MSAPVLGIYMSPNRVLISAGRGD*ETGRKL Trigger: GAGCTTCCTCCCAGTCTCCCAGTCCCCACGTCCAGC...GCTGATTAACACACGATTTGGAGACATGTATATGCCTAGCACGGGAGCGCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCATGAGCGCTCCCGTGCTAGGCATATACATGTCTCCAAATCGTGTGTTGAGGTGGCAGGGCTATaGGAAGGGGACCTGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: QQHERSRARHIHVSKSCVEVAGL*EGDLVM Trigger: CATTACCAGGTCCCCTTCCCATAGCCCTGCCACCTC...AACACACGATTTGGAGACATGTATATGCCTAGCACGGGAGCGCTCATGCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTAGTTGTTTGTGATGAATCCGTAGGCACTGACCTGGTCACAGGTGTGCAATGTAAGAGGCCGAGGTaGCAGGGCTATGGGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVVVCDESVGTDLVTGVQCKRPR*QGYGKG Trigger: CCCCTTCCCATAGCCCTGCCACCTCGGCCTCTTACA...TTGCACACCTGTGACCAGGTCAGTGCCTACGGATTCATCACAAACAACTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR CCA 90 bp | GTTAGATGCCCTAGGCTGGTCTGTTCGCCCTTCCTGAGTACTGGGAATAAGTGCAGGGACAGCGAGTGTTaGCAAAGTCGGCTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRCPRLVCSPFLSTGNKCRDSEC*QSRLFL Trigger: CAGAAAGAGCCGACTTTGCCAACACTCGCTGTCCCT...GCACTTATTCCCAGTACTCAGGAAGGGCGAACAGACCAGCCTAGGGCATCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| CDS-3UTR CCA 90 bp | CTGGTAGTTGTTTGTGATGAATCCGTAGGCACTGACCTGGTCACAGGTGTGCAAAAGGAGCACTGGAACTaGGGGATGTGTGGAGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVVVCDESVGTDLVTGVQKEHWN*GMCGGG Trigger: ACCCCCTCCACACATCCCCCAGTTCCAGTGCTCCTT...TTGCACACCTGTGACCAGGTCAGTGCCTACGGATTCATCACAAACAACTACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR TCA 90 bp | GGCTACTCTTGCAGAACACCTGGGTTCAATTGCCAGCACCTACATGGTGCTCAGTCATGGTGTTCACGGTaGAACCGTAGAAGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GYSCRTPGFNCQHLHGAQSWCSR*NRRRRS Trigger: AGACCTCCTTCTACGGTTTCACCGTGAACACCATGA...CTGAGCACCATGTAGGTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAAACCTCTCTGTCAGGTAGCTGATGAAGTCTGGGTGCAGGAGCTTGAAGTGGGGAAGGAGCACTaGAACTGGGGGATGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FQKPLCQVADEVWVQELEVGKEH*NWGMCG Trigger: TCCACACATCCCCCAGTTCCAGTGCTCCTTCCCCAC...TTCAAGCTCCTGCACCCAGACTTCATCAGCTACCTGACAGAGAGGTTTCTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAACTACATTCTGCCTCTGTTTCTCATCCTCTATCAGGAGGCAGAAGTGTCCCGAGGAGTACAGCATaGGGAGGATCCCAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FKLHSASVSHPLSGGRSVPRSTA*GGSQSW Trigger: CCAGCTCTGGGATCCTCCTCATGCTGTACTCCTCGG...GACACTTCTGCCTCCTGATAGAGGATGAGAAACAGAGGCAGAATGTAGTTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| CDS-3UTR GCA 90 bp | AGCCGAGAAAAGCATTTCTCACAGTGGATTTCCTGGAAGTCAGGGTTGGCCTTTACCTGGTCACAGGTGTaGAAGGCTGTCAGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SREKHFSQWISWKSGLAFTWSQV*KAVSSM Trigger: CATGCTGCTGACAGCCTTGCACACCTGTGACCAGGT...AAAGGCCAACCCTGACTTCCAGGAAATCCACTGTGAGAAATGCTTTTCTCGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| CDS-3UTR CCA 90 bp | TCTCCTTCAGGTTCTTTCCTTGTTTCTAGGTTATTGCCCTGTAGTGCCAGAGAGCAGGTTCTGCCCTTGTaGCACAGAGGTGAAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPSGSFLVSRLLPCSAREQVLPL*HRGEAQ Trigger: CTGGGCTTCACCTCTGTGCCACAAGGGCAGAACCTG...CTCTCTGGCACTACAGGGCAATAACCTAGAAACAAGGAAAGAACCTGAAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
||
| CDS-3UTR CCA 90 bp | GTGCTAGGCATATACATGTCTCCAAATCGTGTGTTAATCAGCTTGGATTTCAGAGAACTGGGGGATGTGTaGAGGGGGTGGCAGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGIYMSPNRVLISLDFRELGDV*RGWQEG Trigger: CCCCTCCTGCCACCCCCTCCACACATCCCCCAGTTC...TCTGAAATCCAAGCTGATTAACACACGATTTGGAGACATGTATATGCCTAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| CDS-3UTR TCA 90 bp | TTCAAACTACATTCTGCCTCTGTTTCTCATCCTCTATCAGGAGGCAGAAGTGTCGGATGCTGGAGGGGATaGAGATGTAGCGCAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: FKLHSASVSHPLSGGRSVGCWRG*RCSAGS Trigger: AGAACCTGCGCTACATCTTCATCCCCTCCAGCATCC...GACACTTCTGCCTCCTGATAGAGGATGAGAAACAGAGGCAGAATGTAGTTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS-3UTR TCA 90 bp | TGGTTGGATGAGACTGGAAATGTGGAAAAGCTCATTGGACTGCATCAGGTGCTGCTGGGTGCAGGAGCTTaGATTTACTGGCAGAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: WLDETGNVEKLIGLHQVLLGAGA*IYWQRF Trigger: AAACCTCTGCCAGTAAATTCAAGCTCCTGCACCCAG...CAGCACCTGATGCAGTCCAATGAGCTTTTCCACATTTCCAGTCTCATCCAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS-3UTR GCA 90 bp | AGCCGAGAAAAGCATTTCTCACAGTGGATTTCCTGGAAGTCAGGGTTGGCCTTTTCGATTTTCTGGCCCTaGCGGGACCCATTCAGAATA | + |
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Preference number: 4 (lower is better) Translates to: SREKHFSQWISWKSGLAFSIFWP*RDPFRI Trigger: TATTCTGAATGGGTCCCGGCAGGGCCAGAAAATCGA...AAAGGCCAACCCTGACTTCCAGGAAATCCACTGTGAGAAATGCTTTTCTCGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS-3UTR GCA 90 bp | TACTCTTGCAGAACACCTGGGTTCAATTGCCAGCACCTACATGGTGCTCAGAGCCTGATGAAGTCTGGGTaGAGGAGCTTGAATTTACTG | + |
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Preference number: 4 (lower is better) Translates to: YSCRTPGFNCQHLHGAQSLMKSG*RSLNLL Trigger: CAGTAAATTCAAGCTCCTGCACCCAGACTTCATCAG...GCTCTGAGCACCATGTAGGTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS-3UTR CCA 90 bp | AAATCGTGTGTTAATCAGCTTGGATTTCAGAAACCTCTCTGTCAGGTAGCTGATGGACTGGGTTGGGGATaGATTAGGGGTGTGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: KSCVNQLGFQKPLCQVADGLGWG*IRGVGG Trigger: CCCTCCCACACCCCTAATCCATCCCCAACCCAGTCC...ATCAGCTACCTGACAGAGAGGTTTCTGAAATCCAAGCTGATTAACACACGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| 3UTR CAA 72 bp | GGACTACTTAGCTCTGAGATGTGCCTGCCCGCCTGTTaGCTGGTGAGCATCATTGTCTCATTTAATGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: GLLSSEMCLPAC*LVSIIVSFNVQ Trigger: CTGAACATTAAATGAGACAATGATGCTCACCAGCAAACAGGCGGGCAGGCACATCTCAGAGCTAAGTAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR CAA 72 bp | GTTGAATGGCTTTGGCATTTGGGACTCAACATGCCATaGGTTTCAGCTCTGCTCGATCGAGGTTCCTGGATA | + |
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Preference number: 4 (lower is better) Translates to: VEWLWHLGLNMP*VSALLDRGSWI Trigger: TATCCAGGAACCTCGATCGAGCAGAGCTGAAACCAATGGCATGTTGAGTCCCAAATGCCAAAGCCATTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR CAA 72 bp | CCTGCCTTTAATTTCCCAAAGAGTCATCAGACGACCTaGGAGTTTGTTCTGCAAGAGGAGCCAGTAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PAFNFPKSHQTT*EFVLQEEPVRP Trigger: AGGCCTTACTGGCTCCTCTTGCAGAACAAACTCCAAGGTCGTCTGATGACTCTTTGGGAAATTAAAGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR CAA 72 bp | CTGTCTCCTTCAGGTTCTTTCCTTGTTTCTAGGTTATaGCCCTGTAGTGCCAGAGAGAACCACATAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSPSGSFLVSRL*PCSARENHIAC Trigger: GCAGGCTATGTGGTTCTCTCTGGCACTACAGGGCAATAACCTAGAAACAAGGAAAGAACCTGAAGGAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS-3UTR TCA 90 bp | TTTGTTCTGCAAGAGGAGCCAGTAAGGCCTCGTGACTGTGGTCACCCTCGGAAGTTCGAAATAGTGGTCTaGGTATTTCTGGTAGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: FVLQEEPVRPRDCGHPRKFEIVV*VFLVVV Trigger: AACAACTACCAGAAATACTCAGACCACTATTTCGAA...CTTCCGAGGGTGACCACAGTCACGAGGCCTTACTGGCTCCTCTTGCAGAACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR CAA 72 bp | CCAGCCCTTCAGCTTAGGGGCTGCATGATAATTTGGTaGGATGAGACTGGAAATGTGGAAAAGCTCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PALQLRGCMIIW*DETGNVEKLIG Trigger: TCCAATGAGCTTTTCCACATTTCCAGTCTCATCCAACCAAATTATCATGCAGCCCCTAAGCTGAAGGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| 3UTR CAA 72 bp | GATCACTTAGCTGCCTGTCTCCTTCAGGTTCTTTCCTaGTTTCTAGGTTATTGCCCTGTAGTGCCAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHLAACLLQVLS*FLGYCPVVPER Trigger: TCTCTCTGGCACTACAGGGCAATAACCTAGAAACAAGGAAAGAACCTGAAGGAGACAGGCAGCTAAGTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS-3UTR CCA 90 bp | AAATCGTGTGTTAATCAGCTTGGATTTCAGAAACCTCTCTGTCAGGTAGCTGATGCTTTTAGTCCAGTCTaGGAGGGAGATTTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSCVNQLGFQKPLCQVADAFSPV*EGDLEA Trigger: AGCCTCCAAATCTCCCTCCCAGACTGGACTAAAAGC...ATCAGCTACCTGACAGAGAGGTTTCTGAAATCCAAGCTGATTAACACACGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| CDS GCA 90 bp | CGTGGGTACGCCATGTTCCTGGCGGGAACCTGGGTCTCAGGGGACTaGTGCCCCGCCGAGGAGTACAGCATGAGGAGGATCCCAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGYAMFLAGTWVSGD*CPAEEYSMRRIPEL Trigger: CAGCTCTGGGATCCTCCTCATGCTGTACTCCTCGGCGGGGCAGCAGTCCCCTGAGACCCAGGTTCCCGCCAGGAACATGGCGTACCCACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS GCA 90 bp | AGAGGCCCTCCCACAGCAGCACCGGGGTGGAGAGGTCAAACAGGCTaGGGAAGCGACGGTCCTTCTGAATGGCCAGGGACAGCGAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RGPPTAAPGWRGQTG*GSDGPSEWPGTASV Trigger: AACACTCGCTGTCCCTGGCCATTCAGAAGGACCGTCGCTTCCGCAGCCTGTTTGACCTCTCCACCCCGGTGCTGCTGTGGGAGGGCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS TCA 90 bp | GAACCTGGGTCTCAGGGGACTGCTGCCCCGCCGAGGAGTACAGCATaGGGAGGATCCCAGAGCTGGTGGCAACGAGCAACAACATCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: EPGSQGTAAPPRSTA*GGSQSWWQRATTSE Trigger: TTCGGATGTTGTTGCTCGTTGCCACCAGCTCTGGGATCCTCCTCATGCTGTACTCCTCGGCGGGGCAGCAGTCCCCTGAGACCCAGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS-3UTR CAA 90 bp | CCTACAAAGCAGTCTTCCCTCCCTCGGCTAAGCCTCAGAAGAGTTGTCTTGACCGCGCAGGTTCTGCCCTaGTGGCACAGAGGTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTKQSSLPRLSLRRVVLTAQVLP*WHRGEA Trigger: GGCTTCACCTCTGTGCCACAAGGGCAGAACCTGCGC...GGTCAAGACAACTCTTCTGAGGCTTAGCCGAGGGAGGGAAGACTGCTTTGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS CCA 90 bp | GGGTGGAGAGGTCAAACAGGCTGCGGAAGCGACGGTCCTTCTGAATaGCCAGGGACAGCGAGTGTTGGCAAAGTCGGCTCTTTCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GWRGQTGCGSDGPSE*PGTASVGKVGSFCF Trigger: AAAACAGAAAGAGCCGACTTTGCCAACACTCGCTGTCCCTGGCCATTCAGAAGGACCGTCGCTTCCGCAGCCTGTTTGACCTCTCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS CCA 90 bp | ACGGATGCTGGAGGGGATGAAGATGTAGCGCAGGTTCTGCCCTTGTaGCACAGAGGTGAAGCCCAGTTTGGCGTAGGAGATGAGCGAGTT | + |
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Preference number: 5 (lower is better) Translates to: TDAGGDEDVAQVLPL*HRGEAQFGVGDERV Trigger: AACTCGCTCATCTCCTACGCCAAACTGGGCTTCACCTCTGTGCCACAAGGGCAGAACCTGCGCTACATCTTCATCCCCTCCAGCATCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS-3UTR CAA 90 bp | TACTCTTGCAGAACACCTGGGTTCAATTGCCAGCACCTACATGGTGCTCAGAGCTCTGGGTGCAGGAGCTaGAATTTACTGGCAGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: YSCRTPGFNCQHLHGAQSSGCRS*NLLAEV Trigger: AACCTCTGCCAGTAAATTCAAGCTCCTGCACCCAGA...GCTCTGAGCACCATGTAGGTGCTGGCAATTGAACCCAGGTGTTCTGCAAGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS-3UTR CAA 90 bp | AGGCTGGTCTGTTCGCCCTTCCTGAGTACTGGGAATAAGTGCGCTGACCACCACCGTGTGTTAATCAGCTaGGATTTCAGAAACCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: RLVCSPFLSTGNKCADHHRVLIS*DFRNLS Trigger: AGAGAGGTTTCTGAAATCCAAGCTGATTAACACACG...GTGGTGGTCAGCGCACTTATTCCCAGTACTCAGGAAGGGCGAACAGACCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS-3UTR CAA 90 bp | ATGAGCGCTCCCGTGCTAGGCATATACATGTCTCCAAATCGTGTGTTAATCAGCGGGGAAACACCCGTTTaGTGGAAGAGGTGCTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: MSAPVLGIYMSPNRVLISGETPV*WKRCCR Trigger: CCTACAGCACCTCTTCCACAAAACGGGTGTTTCCCC...GCTGATTAACACACGATTTGGAGACATGTATATGCCTAGCACGGGAGCGCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| CDS-3UTR CAA 90 bp | TCTCCTTCAGGTTCTTTCCTTGTTTCTAGGTTATTGCCCTGTAGTGCCAGAGAGTCCGAATTCGGTGGTTaGGGGTCAAAGAATGCTCGT | + |
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Preference number: 5 (lower is better) Translates to: SPSGSFLVSRLLPCSARESEFGG*GSKNAR Trigger: ACGAGCATTCTTTGACCCCAAACCACCGAATTCGGA...CTCTCTGGCACTACAGGGCAATAACCTAGAAACAAGGAAAGAACCTGAAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS-3UTR CAA 90 bp | TATTATCTAGCTTCAAACTACATTCTGCCTCTGTTTCTCATCCTCTATCAGGAGCAAAGGATGCCGGCGTaGTGCAGGTCTCGCCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: YYLASNYILPLFLILYQEQRMPA*CRSRHS Trigger: GCTATGGCGAGACCTGCACAACGCCGGCATCCTTTG...CTCCTGATAGAGGATGAGAAACAGAGGCAGAATGTAGTTTGAAGCTAGATAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS GCA 72 bp | GCCATGTTCCTGGCGGGAACCTGGGTCTCAGGGGACTaGTGCCCCGCCGAGGAGTACAGCATGAGGAGGATC | + |
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Preference number: 6 (lower is better) Translates to: AMFLAGTWVSGD*CPAEEYSMRRI Trigger: GATCCTCCTCATGCTGTACTCCTCGGCGGGGCAGCAGTCCCCTGAGACCCAGGTTCCCGCCAGGAACATGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS CCA 72 bp | GAGTCAGTAGGTGGCGGCTGCCTGGATTGCTGGGCCTaGCACGGGAAAGGGCAGGGGAAACACCCGTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: ESVGGGCLDCWA*HGKGQGKHPFC Trigger: ACAAAACGGGTGTTTCCCCTGCCCTTTCCCGTGCCAGGCCCAGCAATCCAGGCAGCCGCCACCTACTGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| CDS CAA 72 bp | GGCCTGGCACGGGAAAGGGCAGGGGAAACACCCGTTTaGTGGAAGAGGTGCTGTAGGGGGCTGGAAATAGGG | + |
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Preference number: 6 (lower is better) Translates to: GLARERAGETPV*WKRCCRGLEIG Trigger: CCCTATTTCCAGCCCCCTACAGCACCTCTTCCACAAAACGGGTGTTTCCCCTGCCCTTTCCCGTGCCAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| CDS CCA 72 bp | GGTCAAACAGGCTGCGGAAGCGACGGTCCTTCTGAATaGCCAGGGACAGCGAGTGTTGGCAAAGTCGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GQTGCGSDGPSE*PGTASVGKVGS Trigger: AGAGCCGACTTTGCCAACACTCGCTGTCCCTGGCCATTCAGAAGGACCGTCGCTTCCGCAGCCTGTTTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS CCA 72 bp | GCACATAGGGGGCGATGTAGGAAGGGATGTTACGGATaGGCCCGATGTAAGAGGCCGAGGTGGCAGGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: AHRGRCRKGCYG*ARCKRPRWQGY Trigger: ATAGCCCTGCCACCTCGGCCTCTTACATCGGGCCCATCCGTAACATCCCTTCCTACATCGCCCCCTATGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| CDS TCA 72 bp | GGGACTTTGTGCTGGCTCAGATTATTCCAGAGTTCCTaGGTGAAGAGGCCCTCCCACAGCAGCACCGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GTLCWLRLFQSS*VKRPSHSSTGV Trigger: CACCCCGGTGCTGCTGTGGGAGGGCCTCTTCACTCAGGAACTCTGGAATAATCTGAGCCAGCACAAAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS CAA 72 bp | GCTGGAGGGGATGAAGATGTAGCGCAGGTTCTGCCCTaGTGGCACAGAGGTGAAGCCCAGTTTGGCGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGGDEDVAQVLP*WHRGEAQFGVG Trigger: TCCTACGCCAAACTGGGCTTCACCTCTGTGCCACAAGGGCAGAACCTGCGCTACATCTTCATCCCCTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS CCA 72 bp | GGAGGGGATGAAGATGTAGCGCAGGTTCTGCCCTTGTaGCACAGAGGTGAAGCCCAGTTTGGCGTAGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GGDEDVAQVLPL*HRGEAQFGVGD Trigger: ATCTCCTACGCCAAACTGGGCTTCACCTCTGTGCCACAAGGGCAGAACCTGCGCTACATCTTCATCCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS CCA 72 bp | GCTGGGAGTAGAAGCGGGAGAATGGGGTATAGAAGGTaGCTGGTAGCACAGATGGAACCACGTGCGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AGSRSGRMGYRR*LVAQMEPRAAF Trigger: GAAAGCCGCACGTGGTTCCATCTGTGCTACCAGCCACCTTCTATACCCCATTCTCCCGCTTCTACTCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144398.2 |
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| CDS CCA 72 bp | CTTTATCAGGACCTTCTGGAACAGGCACACCCAGGATaGCGGATCTCAGCATCAGGTAGTCACGGATGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LYQDLLEQAHPG*RISASGSHGCW Trigger: CCAGCATCCGTGACTACCTGATGCTGAGATCCGCCATCCTGGGTGTGCCTGTTCCAGAAGGTCCTGATAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS CCA 72 bp | ATAGGTGTGAGGCCTGTCCCCTTTATCAGGACCTTCTaGAACAGGCACACCCAGGATGGCGGATCTCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: IGVRPVPFIRTF*NRHTQDGGSQH Trigger: ATGCTGAGATCCGCCATCCTGGGTGTGCCTGTTCCAGAAGGTCCTGATAAAGGGGACAGGCCTCACACCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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| CDS CAA 72 bp | CAAAGTCGGCTCTTTCTGTTTTCCGAATTCGGTGGTTaGGGGTCAAAGAATGCTCGTGGGTACGCCATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QSRLFLFSEFGG*GSKNARGYAMF Trigger: GAACATGGCGTACCCACGAGCATTCTTTGACCCCAAACCACCGAATTCGGAAAACAGAAAGAGCCGACTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079545.6 |
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