Pregenerated sensors for ST6GAL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024172Ensembl transcript IDs: ENSMUST00000025000.4, ENSMUST00000086878.10, ENSMUST00000133899.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCTCAGAGGCAGCAACTATATCTAATGCAGCAGATGTCCTCTACTaGAGTTTTATATCCATCCACAGAACACAGTTAGCCCACTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: GSEAATISNAADVLY*SFISIHRTQLAHWE Trigger: TTCCCAGTGGGCTAACTGTGTTCTGTGGATGGATATAAAACTGCAGTAGAGGACATCTGCTGCATTAGATATAGTTGCTGCCTCTGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| 3UTR CCA 90 bp | AGACATGTCAGCATGGTGACAAGGTTGAACTCTCATGAGATTACATaGTTGGACCAGGCTAAGCAGAAGATGATACTCTGTCACTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: RHVSMVTRLNSHEIT*LDQAKQKMILCHSE Trigger: TTCTGAGTGACAGAGTATCATCTTCTGCTTAGCCTGGTCCAACCATGTAATCTCATGAGAGTTCAACCTTGTCACCATGCTGACATGTCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR CCA 90 bp | CCCAAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGAGCTaGCAACACAGGCTGAACTCTGTTCCAACAGATGTATTGGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: PKQCPINPDYMSMVS*QHRLNSVPTDVLVH Trigger: ATGAACCAATACATCTGTTGGAACAGAGTTCAGCCTGTGTTGCCAGCTCACCATACTCATATAGTCTGGATTTATTGGGCACTGTTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR GCA 90 bp | AGAACACTGGGAAGCAAAACTGCGAAGCTGTTGTTGAAAATCCTGTaGCTGACAGTATATGTGAAGAAACGTCAAACACATCTGAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: RTLGSKTAKLLLKIL*LTVYVKKRQTHLSE Trigger: CTCACTCAGATGTGTTTGACGTTTCTTCACATATACTGTCAGGCACAGGATTTTCAACAACAGCTTCGCAGTTTTGCTTCCCAGTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR TCA 90 bp | AGGCAGACAAAGGTGCTGTTCTTCACTGTTGGCAGATGTTTCGTTTaGCTTCTTAGATTGTGTGGTAGGGATGGTTTGTACTTTTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: RQTKVLFFTVGRCFV*LLRLCGRDGLYFCK Trigger: CTTACAAAAGTACAAACCATCCCTACCACACAATCTAAGAAGTCAAACGAAACATCTGCCAACAGTGAAGAACAGCACCTTTGTCTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR CCA 90 bp | TTAGATTGTGTGGTAGGGATGGTTTGTACTTTTGTAAGTGTAGCTTaGTTCTCAGCTGTAACATTCAGAGAACACTGGGAAGCAAAACTG | + |
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Preference number: 1 (lower is better) Translates to: LDCVVGMVCTFVSVA*FSAVTFREHWEAKL Trigger: CAGTTTTGCTTCCCAGTGTTCTCTGAATGTTACAGCTGAGAACCAAGCTACACTTACAAAAGTACAAACCATCCCTACCACACAATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR CCA 90 bp | GTTTCACAGGTACTGTTGGGTCACTTAAGGATAGTAAATGTGGGGTaGAAGTATTTAATCACTATCTGGCAAAATATTGCCTGTTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: VSQVLLGHLRIVNVG*KYLITIWQNIACWD Trigger: GTCCCAACAGGCAATATTTTGCCAGATAGTGATTAAATACTTCCACCCCACATTTACTATCCTTAAGTGACCCAACAGTACCTGTGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR GCA 90 bp | GAATGCAGGCATGATTTACCTAACTTAATTATGTCTAAACAGAGCTaGCTTGATCAGTCATGTAGCCATGGGGTAATATTTGACTATCAG | + |
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Preference number: 1 (lower is better) Translates to: ECRHDLPNLIMSKQS*LDQSCSHGVIFDYQ Trigger: CTGATAGTCAAATATTACCCCATGGCTACATGACTGATCAAGGCAGCTCTGTTTAGACATAATTAAGTTAGGTAAATCATGCCTGCATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR TCA 90 bp | GGACAGATCTGGAGACTATTCTACATGTATTCTAAGAAAATCTGGTaGAACTTGATCAAGCTGCCTATGTATACCAAAGTCTTTTATCAC | + |
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Preference number: 1 (lower is better) Translates to: GQIWRLFYMYSKKIW*NLIKLPMYTKVFYH Trigger: GTGATAAAAGACTTTGGTATACATAGGCAGCTTGATCAAGTTTCACCAGATTTTCTTAGAATACATGTAGAATAGTCTCCAGATCTGTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR TCA 90 bp | GGGGTAATATTTGACTATCAGAAAGTCAAACAGAAATTGGCAGTGTaGTGGGACAGATCTGGAGACTATTCTACATGTATTCTAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: GVIFDYQKVKQKLAV*WDRSGDYSTCILRK Trigger: TTTTCTTAGAATACATGTAGAATAGTCTCCAGATCTGTCCCATCACACTGCCAATTTCTGTTTGACTTTCTGATAGTCAAATATTACCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR CCA 90 bp | GTATCTAAACATACCAAGAGACAGAAATGTGGAAAAATCTCACAATaGAAATGTCCTGATATAAAAAGTTTGCTGGAATGCAGGCATGAT | + |
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Preference number: 1 (lower is better) Translates to: VSKHTKRQKCGKISQ*KCPDIKSLLECRHD Trigger: ATCATGCCTGCATTCCAGCAAACTTTTTATATCAGGACATTTCCATTGTGAGATTTTTCCACATTTCTGTCTCTTGGTATGTTTAGATAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR TCA 90 bp | CTACTTGACGCACCCAAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGATCTGCAGTCCTGCTTaGGCTCTGCAGGGGGCAATA | + |
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Preference number: 2 (lower is better) Translates to: LLDAPKQCPINPDYMSMVICSPA*ALQGAI Trigger: TATTGCCCCCTGCAGAGCTCAAGCAGGACTGCAGAT...CACCATACTCATATAGTCTGGATTTATTGGGCACTGTTTGGGTGCGTCAAGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR GCA 90 bp | TGTAGCCATGGGGTAATATTTGACTATCAGAAAGTCAAACAGAAATTGGCAGTGGGACATCTGCAGTCCTaGTTGAGCTCTGCAGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: CSHGVIFDYQKVKQKLAVGHLQS*LSSAGG Trigger: GCCCCCTGCAGAGCTCAAGCAGGACTGCAGATGTCC...CACTGCCAATTTCTGTTTGACTTTCTGATAGTCAAATATTACCCCATGGCTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR GCA 90 bp | AAAACACAAAGGACTATGACATCTGTTAGTCTTCAGGGAACAAACAGCACCGGGCTAGGTAGAGTATGCTaGAGGCAGACAAAGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: KTQRTMTSVSLQGTNSTGLGRVC*RQTKVL Trigger: CAGCACCTTTGTCTGCCTGCAGCATACTCTACCTAG...CCCGGTGCTGTTTGTTCCCTGAAGACTAACAGATGTCATAGTCCTTTGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTCAGAGGGTGTTGCTAAAAGTAACCCAGGTTGTTACCATCGCTCAGAGTGCAGATGTCCTCTACTaGAGTTTTATATCCATCCAC | + |
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Preference number: 2 (lower is better) Translates to: GAQRVLLKVTQVVTIAQSADVLY*SFISIH Trigger: GTGGATGGATATAAAACTGCAGTAGAGGACATCTGC...ACTCTGAGCGATGGTAACAACCTGGGTTACTTTTAGCAACACCCTCTGAGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| 3UTR-3UTR CCA 90 bp | AAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGAGCTGGCAACACAGGCTCTGTCACTCAGAATaGGATGCCAGCAGATTATCT | + |
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Preference number: 2 (lower is better) Translates to: KQCPINPDYMSMVSWQHRLCHSE*DASRLS Trigger: AGATAATCTGCTGGCATCCCATTCTGAGTGACAGAG...CCTGTGTTGCCAGCTCACCATACTCATATAGTCTGGATTTATTGGGCACTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR CAA 90 bp | ATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTTaGAGGACAACAGTAGTACCTTATTGCACATCAGTTCCCAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: ILCVCVCVCVCVCVT*RTTVVPYCTSVPKS Trigger: ACTCTTGGGAACTGATGTGCAATAAGGTACTACTGTTGTCCTCAAAGTCACACACACACACACACACACACACACACACACACACAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR TCA 90 bp | CCTCTACTGCAGTTTTATATCCATCCACAGAACACAGTTAGCCCACTGGGAACCTCTTTCTGTATAAAATaGGTTTTCACCCTGCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: PLLQFYIHPQNTVSPLGTSFCIK*VFTLLV Trigger: CACAAGCAGGGTGAAAACTCATTTTATACAGAAAGA...GGTTCCCAGTGGGCTAACTGTGTTCTGTGGATGGATATAAAACTGCAGTAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| 3UTR-3UTR CCA 90 bp | AAAACACAAAGGACTATGACATCTGTTAGTCTTCAGGGAACAAACAGCACCGGGGCTGTTCTTCACTGTTaGCAGATGTTTCGTTTGACT | + |
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Preference number: 2 (lower is better) Translates to: KTQRTMTSVSLQGTNSTGAVLHC*QMFRLT Trigger: AGTCAAACGAAACATCTGCCAACAGTGAAGAACAGC...CCCGGTGCTGTTTGTTCCCTGAAGACTAACAGATGTCATAGTCCTTTGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR CCA 90 bp | CTACTTGACGCACCCAAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGATGAGATTACATGGTTaGACCAGGCTAAGCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LLDAPKQCPINPDYMSMVMRLHG*TRLSRR Trigger: TCTTCTGCTTAGCCTGGTCCAACCATGTAATCTCAT...CACCATACTCATATAGTCTGGATTTATTGGGCACTGTTTGGGTGCGTCAAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR CAA 90 bp | AGCTGTAACATTCAGAGAACACTGGGAAGCAAAACTGCGAAGCTGTaGTTGAAAATCCTGTGCCTGACAGTATATGTGAAGAAACGTCAA | + |
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Preference number: 2 (lower is better) Translates to: SCNIQRTLGSKTAKL*LKILCLTVYVKKRQ Trigger: TTGACGTTTCTTCACATATACTGTCAGGCACAGGATTTTCAACAACAGCTTCGCAGTTTTGCTTCCCAGTGTTCTCTGAATGTTACAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR TCA 90 bp | CTACTTGACGCACCCAAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGCAAGTTTGTGATAGTTaGGAAAAGCCTACAAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: LLDAPKQCPINPDYMSMVQVCDS*EKPTRA Trigger: AGCTCTTGTAGGCTTTTCTCAACTATCACAAACTTG...CACCATACTCATATAGTCTGGATTTATTGGGCACTGTTTGGGTGCGTCAAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR TCA 90 bp | GGGTGGAAGTATTTAATCACTATCTGGCAAAATATTGCCTGTTGGGACACATTTAAAACTGGTGGTCTCTaGAAACCTTGCTTCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GWKYLITIWQNIACWDTFKTGGL*KPCFLR Trigger: CCTGAGGAAGCAAGGTTTTCAGAGACCACCAGTTTT...AAATGTGTCCCAACAGGCAATATTTTGCCAGATAGTGATTAAATACTTCCACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR GCA 90 bp | CTACTTGACGCACCCAAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGACTGGGAAGCAAAACTaGGAAGCTGTTGTTGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: LLDAPKQCPINPDYMSMVTGKQN*EAVVEN Trigger: ATTTTCAACAACAGCTTCGCAGTTTTGCTTCCCAGT...CACCATACTCATATAGTCTGGATTTATTGGGCACTGTTTGGGTGCGTCAAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR GCA 90 bp | ACACTGACCTCAATAAGTTATTCTTTAATCAAGTTCTCAGGCCATCTAAGGGCATGTACCACCTGTGTGTaGTACATGTTGTTGGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: TLTSISYSLIKFSGHLRACTTCV*YMLLAR Trigger: CCTAGCCAACAACATGTAGCACACACAGGTGGTACA...TGCCCTTAGATGGCCTGAGAACTTGATTAAAGAATAACTTATTGAGGTCAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR GCA 90 bp | AAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGAGCTGGCAACACAGGACATGGCCCTATTATTaGACTGAGTTGTCTGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: KQCPINPDYMSMVSWQHRTWPYY*TELSVV Trigger: AACTACAGACAACTCAGTGCAATAATAGGGCCATGT...CCTGTGTTGCCAGCTCACCATACTCATATAGTCTGGATTTATTGGGCACTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR CAA 90 bp | CTTAGATTGTGTGGTAGGGATGGTTTGTACTTTTGTAAGTGTAGCTaGGTTCTCAGCTGTAACATTCAGAGAACACTGGGAAGCAAAACT | + |
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Preference number: 2 (lower is better) Translates to: LRLCGRDGLYFCKCS*VLSCNIQRTLGSKT Trigger: AGTTTTGCTTCCCAGTGTTCTCTGAATGTTACAGCTGAGAACCAAGCTACACTTACAAAAGTACAAACCATCCCTACCACACAATCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR TCA 90 bp | AAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGAGCTGGCAACACAGGAGATTATCTCATAACTaGAAGCTCAAGTTCTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: KQCPINPDYMSMVSWQHRRLSHN*KLKFSH Trigger: GTGAGAGAACTTGAGCTTTCAGTTATGAGATAATCT...CCTGTGTTGCCAGCTCACCATACTCATATAGTCTGGATTTATTGGGCACTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR GCA 90 bp | TCTAATGCAGCAGATGTCCTCTACTGCAGTTTTATATCCATCCACAGAACACAGAATGAGTTTTCACCCTaGTTGTGTACCCTAACATTC | + |
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Preference number: 2 (lower is better) Translates to: SNAADVLYCSFISIHRTQNEFSP*LCTLTF Trigger: GAATGTTAGGGTACACAAGCAGGGTGAAAACTCATT...CTGTGTTCTGTGGATGGATATAAAACTGCAGTAGAGGACATCTGCTGCATTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| 3UTR-3UTR TCA 90 bp | CTTGATCAGTCATGTAGCCATGGGGTAATATTTGACTATCAGAAAGTCAAACAGCTATTCTTTATAGCTTaGAAGGAACAAGGGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LDQSCSHGVIFDYQKVKQLFFIA*KEQGCP Trigger: GGGACACCCTTGTTCCTTTCAAGCTATAAAGAATAG...CTGTTTGACTTTCTGATAGTCAAATATTACCCCATGGCTACATGACTGATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR TCA 90 bp | CTTGATCAGTCATGTAGCCATGGGGTAATATTTGACTATCAGAAAGTCAAACAGTCCCCCACAATACTTTaGAAGCCACACATTTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: LDQSCSHGVIFDYQKVKQSPTIL*KPHILQ Trigger: TTGCAAAATGTGTGGCTTTCAAAGTATTGTGGGGGA...CTGTTTGACTTTCTGATAGTCAAATATTACCCCATGGCTACATGACTGATCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR TCA 90 bp | ACACTGACCTCAATAAGTTATTCTTTAATCAAGTTCTCAGGCCATCTAAGGGCAAAGGTTGAACTCTCATaGGATTACATGGTTGGACCA | + |
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Preference number: 2 (lower is better) Translates to: TLTSISYSLIKFSGHLRAKVELS*DYMVGP Trigger: TGGTCCAACCATGTAATCTCATGAGAGTTCAACCTT...TGCCCTTAGATGGCCTGAGAACTTGATTAAAGAATAACTTATTGAGGTCAGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR GCA 90 bp | GGGGTGGAAGTATTTAATCACTATCTGGCAAAATATTGCCTGTTGGGACACATTACAGTAGTACCTTATTaGACATCAGTTCCCAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: GVEVFNHYLAKYCLLGHITVVPY*TSVPKS Trigger: ACTCTTGGGAACTGATGTGCAATAAGGTACTACTGT...AATGTGTCCCAACAGGCAATATTTTGCCAGATAGTGATTAAATACTTCCACCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR CCA 90 bp | GAATCTCACATCCTTCAATATGGTGAGGCTCAGAGGCAGCAACTATATCTAATGCAATGTCCCTTTTGTTaGTTAGCATTTCAAACTACC | + |
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Preference number: 2 (lower is better) Translates to: ESHILQYGEAQRQQLYLMQCPFC*LAFQTT Trigger: GGTAGTTTGAAATGCTAACCAACAAAAGGGACATTG...CATTAGATATAGTTGCTGCCTCTGAGCCTCACCATATTGAAGGATGTGAGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| 3UTR-3UTR TCA 90 bp | TTGGCAGATGTTTCGTTTGACTTCTTAGATTGTGTGGTAGGGATGGTTTGTACTTCAAACACATCTGAGTaGGAAATCAGACATTCATCA | + |
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Preference number: 2 (lower is better) Translates to: LADVSFDFLDCVVGMVCTSNTSE*EIRHSS Trigger: TGATGAATGTCTGATTTCTCACTCAGATGTGTTTGA...AGTACAAACCATCCCTACCACACAATCTAAGAAGTCAAACGAAACATCTGCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR TCA 90 bp | GAATGCAGGCATGATTTACCTAACTTAATTATGTCTAAACAGAGCTGCCTTGATAGGCTAAGCAGAAGATaGTACTCTGTCACTCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: ECRHDLPNLIMSKQSCLDRLSRR*YSVTQN Trigger: ATTCTGAGTGACAGAGTATCATCTTCTGCTTAGCCT...ATCAAGGCAGCTCTGTTTAGACATAATTAAGTTAGGTAAATCATGCCTGCATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR CCA 90 bp | TTGGCAGATGTTTCGTTTGACTTCTTAGATTGTGTGGTAGGGATGGTTTGTACTTACAGGACCTCAACTTaGATATTTCTAGATGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: LADVSFDFLDCVVGMVCTYRTST*IFLDGN Trigger: GTTTCCATCTAGAAATATCCAAGTTGAGGTCCTGTA...AGTACAAACCATCCCTACCACACAATCTAAGAAGTCAAACGAAACATCTGCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR CCA 90 bp | TCATACAACATGAACAATGCCTCCTCTAGAGTTACCGAGATGATTAGACATGTCTTTGTAAGTGTAGCTTaGTTCTCAGCTGTAACATTC | + |
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Preference number: 2 (lower is better) Translates to: SYNMNNASSRVTEMIRHVFVSVA*FSAVTF Trigger: GAATGTTACAGCTGAGAACCAAGCTACACTTACAAA...GACATGTCTAATCATCTCGGTAACTCTAGAGGAGGCATTGTTCATGTTGTATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR CCA 90 bp | TATCTAATGCAGCAGATGTCCTCTACTGCAGTTTTATATCCATCCACAGAACACTTAGTTTCTTTATATTaGCAGAACTTAGCAGTGCGC | + |
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Preference number: 2 (lower is better) Translates to: YLMQQMSSTAVLYPSTEHLVSLY*QNLAVR Trigger: GCGCACTGCTAAGTTCTGCCAATATAAAGAAACTAA...GTGTTCTGTGGATGGATATAAAACTGCAGTAGAGGACATCTGCTGCATTAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| 3UTR-3UTR TCA 90 bp | GGGTGGAAGTATTTAATCACTATCTGGCAAAATATTGCCTGTTGGGACACATTTGAGGTATCATGCCCATaGGTAAAAATCTGTTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: GWKYLITIWQNIACWDTFEVSCP*VKICFL Trigger: TAGAAAACAGATTTTTACTCATGGGCATGATACCTC...AAATGTGTCCCAACAGGCAATATTTTGCCAGATAGTGATTAAATACTTCCACCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR TCA 90 bp | TATCTGGCAAAATATTGCCTGTTGGGACACATTTTGTTAATACAAGAAGCAGCCGAATATTTAACAGACTaGTTCCCACAAGTCTTTAGG | + |
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Preference number: 2 (lower is better) Translates to: YLAKYCLLGHILLIQEAAEYLTD*FPQVFR Trigger: CCTAAAGACTTGTGGGAATCAGTCTGTTAAATATTC...GGCTGCTTCTTGTATTAACAAAATGTGTCCCAACAGGCAATATTTTGCCAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCCATGGGGTAATATTTGACTATCAGAAAGTCAAACAGAAATTGGCAGTGGAGCTACAGAGTGATTaGAAAGCTAGGAATATAATG | + |
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Preference number: 2 (lower is better) Translates to: CSHGVIFDYQKVKQKLAVELQSD*KARNIM Trigger: CATTATATTCCTAGCTTTCCAATCACTCTGTAGCTC...CACTGCCAATTTCTGTTTGACTTTCTGATAGTCAAATATTACCCCATGGCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR CCA 90 bp | GAATGCAGGCATGATTTACCTAACTTAATTATGTCTAAACAGAGCTGCCTTGATAGCTCCAAGGACCACTaGAGAAAATTCATACAACAT | + |
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Preference number: 2 (lower is better) Translates to: ECRHDLPNLIMSKQSCLDSSKDH*RKFIQH Trigger: ATGTTGTATGAATTTTCTCCAGTGGTCCTTGGAGCT...ATCAAGGCAGCTCTGTTTAGACATAATTAAGTTAGGTAAATCATGCCTGCATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR GCA 90 bp | ACATGCCTGCAAAAACAAAGGTGGATTTCTAGCTGTTTATGCTTAAAACTGAACTTGTTGAAAATCCTGTaGCTGACAGTATATGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: TCLQKQRWISSCLCLKLNLLKIL*LTVYVK Trigger: CTTCACATATACTGTCAGGCACAGGATTTTCAACAA...GTTCAGTTTTAAGCATAAACAGCTAGAAATCCACCTTTGTTTTTGCAGGCATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR-3UTR GCA 90 bp | GAATGCAGGCATGATTTACCTAACTTAATTATGTCTAAACAGAGCTGCCTTGATTATCTGGCAAAATATTaGCTGTTGGGACACATTTTG | + |
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Preference number: 2 (lower is better) Translates to: ECRHDLPNLIMSKQSCLDYLAKY*LLGHIL Trigger: CAAAATGTGTCCCAACAGGCAATATTTTGCCAGATA...ATCAAGGCAGCTCTGTTTAGACATAATTAAGTTAGGTAAATCATGCCTGCATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR GCA 72 bp | AAGCCACTGAGGACATCTGCAGTCCTGCTTGAGCTCTaGAGGGGGCAATACCCAAACAAAAACTGGTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KPLRTSAVLLEL*RGQYPNKNWWS Trigger: AGACCACCAGTTTTTGTTTGGGTATTGCCCCCTGCAGAGCTCAAGCAGGACTGCAGATGTCCTCAGTGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR CCA 72 bp | ACACCACCTGTACCACCTGTGTGTGCTACATGTTGTTaGCTAGGTAGAGTATGCTGCAGGCAGACAAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TPPVPPVCATCC*LGRVCCRQTKV Trigger: CACCTTTGTCTGCCTGCAGCATACTCTACCTAGCCAACAACATGTAGCACACACAGGTGGTACAGGTGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR GCA 72 bp | CCTGTGTGTGCTACATGTTGTTGGCTAGGTAGAGTATaGTGCAGGCAGACAAAGGTGCTGTTCTTCACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PVCATCCWLGRV*CRQTKVLFFTV Trigger: AACAGTGAAGAACAGCACCTTTGTCTGCCTGCAGCATACTCTACCTAGCCAACAACATGTAGCACACACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | TATCTGGCAAAATATTGCCTGTTGGGACACATTTTGTTAATACAAGAAGCAGCCCATCTGCAGTCCTGCTaGAGCTCTGCAGGGGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: YLAKYCLLGHILLIQEAAHLQSC*SSAGGN Trigger: ATTGCCCCCTGCAGAGCTCAAGCAGGACTGCAGATG...GGCTGCTTCTTGTATTAACAAAATGTGTCCCAACAGGCAATATTTTGCCAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAACACAAAGGACTATGACATCTGTTAGTCTTCAGGGAACAAACAGCACCGGGACTGCGAAGCTGTTGTaGAAAATCCTGTGCCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: KTQRTMTSVSLQGTNSTGTAKLL*KILCLT Trigger: TGTCAGGCACAGGATTTTCAACAACAGCTTCGCAGT...CCCGGTGCTGTTTGTTCCCTGAAGACTAACAGATGTCATAGTCCTTTGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR TCA 72 bp | ATGAGATTACATGGTTGGACCAGGCTAAGCAGAAGATaGTACTCTGTCACTCAGAATGGGATGCCAGCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: MRLHGWTRLSRR*YSVTQNGMPAD Trigger: ATCTGCTGGCATCCCATTCTGAGTGACAGAGTATCATCTTCTGCTTAGCCTGGTCCAACCATGTAATCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR GCA 72 bp | TGTGGGAGACTGATTCTACTTGACGCACCCAAACAGTaGCCAATAAATCCAGACTATATGAGTATGGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CGRLILLDAPKQ*PINPDYMSMVS Trigger: GCTCACCATACTCATATAGTCTGGATTTATTGGGCACTGTTTGGGTGCGTCAAGTAGAATCAGTCTCCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGAGCTGGCAACACAGGTGTGTGTGTGTGACTTaGAGGACAACAGTAGTACCT | + |
|
Preference number: 3 (lower is better) Translates to: KQCPINPDYMSMVSWQHRCVCVT*RTTVVP Trigger: AGGTACTACTGTTGTCCTCAAAGTCACACACACACA...CCTGTGTTGCCAGCTCACCATACTCATATAGTCTGGATTTATTGGGCACTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR TCA 72 bp | CTCAGAGTGGTAAGAATCTCACATCCTTCAATATGGTaGGGCTCAGAGGCAGCAACTATATCTAATGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LRVVRISHPSIW*GSEAATISNAA Trigger: TGCTGCATTAGATATAGTTGCTGCCTCTGAGCCTCACCATATTGAAGGATGTGAGATTCTTACCACTCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
||
| 3UTR CCA 72 bp | AGCATGGTGACAAGGTTGAACTCTCATGAGATTACATaGTTGGACCAGGCTAAGCAGAAGATGATACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SMVTRLNSHEIT*LDQAKQKMILC Trigger: ACAGAGTATCATCTTCTGCTTAGCCTGGTCCAACCATGTAATCTCATGAGAGTTCAACCTTGTCACCATGCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR CCA 72 bp | TGCCCAATAAATCCAGACTATATGAGTATGGTGAGCTaGCAACACAGGCTGAACTCTGTTCCAACAGATGTA | + |
|
Preference number: 3 (lower is better) Translates to: CPINPDYMSMVS*QHRLNSVPTDV Trigger: TACATCTGTTGGAACAGAGTTCAGCCTGTGTTGCCAGCTCACCATACTCATATAGTCTGGATTTATTGGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | CTACTTGACGCACCCAAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGTGTGGTAGGGATGGTTaGTACTTTTGTAAGTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLDAPKQCPINPDYMSMVCGRDG*YFCKCS Trigger: GCTACACTTACAAAAGTACAAACCATCCCTACCACA...CACCATACTCATATAGTCTGGATTTATTGGGCACTGTTTGGGTGCGTCAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAACACAAAGGACTATGACATCTGTTAGTCTTCAGGGAACAAACAGCACCGGGAGCATGGTGACAAGGTaGAACTCTCATGAGATTACA | + |
|
Preference number: 3 (lower is better) Translates to: KTQRTMTSVSLQGTNSTGSMVTR*NSHEIT Trigger: TGTAATCTCATGAGAGTTCAACCTTGTCACCATGCT...CCCGGTGCTGTTTGTTCCCTGAAGACTAACAGATGTCATAGTCCTTTGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR TCA 72 bp | AAGGTGCTGTTCTTCACTGTTGGCAGATGTTTCGTTTaGCTTCTTAGATTGTGTGGTAGGGATGGTTTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: KVLFFTVGRCFV*LLRLCGRDGLY Trigger: GTACAAACCATCCCTACCACACAATCTAAGAAGTCAAACGAAACATCTGCCAACAGTGAAGAACAGCACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR GCA 72 bp | GCAGCAACTATATCTAATGCAGCAGATGTCCTCTACTaGAGTTTTATATCCATCCACAGAACACAGTTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: AATISNAADVLY*SFISIHRTQLA Trigger: GGCTAACTGTGTTCTGTGGATGGATATAAAACTGCAGTAGAGGACATCTGCTGCATTAGATATAGTTGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
||
| 3UTR CCA 72 bp | GTGGTAGGGATGGTTTGTACTTTTGTAAGTGTAGCTTaGTTCTCAGCTGTAACATTCAGAGAACACTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VVGMVCTFVSVA*FSAVTFREHWE Trigger: TTCCCAGTGTTCTCTGAATGTTACAGCTGAGAACCAAGCTACACTTACAAAAGTACAAACCATCCCTACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGAGCTGGCAACACAGGCTATCTGGCAAAATATaGCCTGTTGGGACACATTTT | + |
|
Preference number: 3 (lower is better) Translates to: KQCPINPDYMSMVSWQHRLSGKI*PVGTHF Trigger: AAAATGTGTCCCAACAGGCAATATTTTGCCAGATAG...CCTGTGTTGCCAGCTCACCATACTCATATAGTCTGGATTTATTGGGCACTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGAGCTGGCAACACAGGTTACAGGACCTCAACTaGGATATTTCTAGATGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KQCPINPDYMSMVSWQHRLQDLN*DISRWK Trigger: TTTCCATCTAGAAATATCCAAGTTGAGGTCCTGTAA...CCTGTGTTGCCAGCTCACCATACTCATATAGTCTGGATTTATTGGGCACTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGAGCTGGCAACACAGGACAAGTAACTTGTGTTaGATTACCACTGTCTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KQCPINPDYMSMVSWQHRTSNLC*ITTVFP Trigger: TGGAAAGACAGTGGTAATCAAACACAAGTTACTTGT...CCTGTGTTGCCAGCTCACCATACTCATATAGTCTGGATTTATTGGGCACTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | GAATGCAGGCATGATTTACCTAACTTAATTATGTCTAAACAGAGCTGCCTTGATTGCTGTTCTTCACTGTaGGCAGATGTTTCGTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: ECRHDLPNLIMSKQSCLDCCSSL*ADVSFD Trigger: GTCAAACGAAACATCTGCCAACAGTGAAGAACAGCA...ATCAAGGCAGCTCTGTTTAGACATAATTAAGTTAGGTAAATCATGCCTGCATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGGAAGTATTTAATCACTATCTGGCAAAATATTGCCTGTTGGGACACATTTTTCCCCCACAATACTTaGAAAGCCACACATTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GWKYLITIWQNIACWDTFFPHNT*KATHFA Trigger: TGCAAAATGTGTGGCTTTCAAAGTATTGTGGGGGAA...AAATGTGTCCCAACAGGCAATATTTTGCCAGATAGTGATTAAATACTTCCACCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTGGAAGTATTTAATCACTATCTGGCAAAATATTGCCTGTTGGGACACATTGTGGAGCTTTCGAATTaGAATATTTACACTGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: GVEVFNHYLAKYCLLGHIVELSN*NIYTDL Trigger: GAGGTCAGTGTAAATATTCAAATTCGAAAGCTCCAC...AATGTGTCCCAACAGGCAATATTTTGCCAGATAGTGATTAAATACTTCCACCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTGATCAGTCATGTAGCCATGGGGTAATATTTGACTATCAGAAAGTCAAACAGCTGTCTTTCCAGAATTaGCAACAGATAATGTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LDQSCSHGVIFDYQKVKQLSFQN*QQIMWQ Trigger: CTGCCACATTATCTGTTGCAAATTCTGGAAAGACAG...CTGTTTGACTTTCTGATAGTCAAATATTACCCCATGGCTACATGACTGATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR TCA 72 bp | CAACATTCAGAGCAAGGAGATCAAGTTTGTGATAGTTaGGAAAAGCCTACAAGAGCTTCCAATAGAAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QHSEQGDQVCDS*EKPTRASNRSD Trigger: GTCACTTCTATTGGAAGCTCTTGTAGGCTTTTCTCAACTATCACAAACTTGATCTCCTTGCTCTGAATGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR CCA 72 bp | GAGGTATACGTGACTGCTAGTTACAGGACCTCAACTTaGATATTTCTAGATGGAAACTGTATCATCAGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: EVYVTASYRTST*IFLDGNCIISS Trigger: ACTACTGATGATACAGTTTCCATCTAGAAATATCCAAGTTGAGGTCCTGTAACTAGCAGTCACGTATACCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCTAAATCTATCTTCAAGTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACAGTAGTACCTTATaGCACATCAGTTCCCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSKSIFKYFVCVCVCVCVNSSTL*HISSQE Trigger: CTCTTGGGAACTGATGTGCAATAAGGTACTACTGTT...CACACACACACACACACACACACACACAAAATACTTGAAGATAGATTTAGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTGATCAGTCATGTAGCCATGGGGTAATATTTGACTATCAGAAAGTCAAACAGCTATCTTCAAGTATTTaGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LDQSCSHGVIFDYQKVKQLSSSI*CVCVCV Trigger: CACACACACACACACACACAAAATACTTGAAGATAG...CTGTTTGACTTTCTGATAGTCAAATATTACCCCATGGCTACATGACTGATCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR CCA 72 bp | TTAATCAAGTTCTCAGGCCATCTAAGGGCATTGTCATaGATACTAATTATGCCTCTAAGTGAATCCTATTCC | + |
|
Preference number: 3 (lower is better) Translates to: LIKFSGHLRALS*ILIMPLSESYS Trigger: GGAATAGGATTCACTTAGAGGCATAATTAGTATCCATGACAATGCCCTTAGATGGCCTGAGAACTTGATTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR-3UTR CAA 90 bp | GGACTGAGAATGAGAGAGTTCTGTGTAACAGTTGGAAATTTAGTAATGCATAACACAATGTCCCTTTTGTaGGTTAGCATTTCAAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: GLRMREFCVTVGNLVMHNTMSLL*VSISNY Trigger: GTAGTTTGAAATGCTAACCAACAAAAGGGACATTGT...GTTATGCATTACTAAATTTCCAACTGTTACACAGAACTCTCTCATTCTCAGTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
||
| 3UTR GCA 72 bp | CATGATTTACCTAACTTAATTATGTCTAAACAGAGCTaGCTTGATCAGTCATGTAGCCATGGGGTAATATTT | + |
|
Preference number: 3 (lower is better) Translates to: HDLPNLIMSKQS*LDQSCSHGVIF Trigger: AAATATTACCCCATGGCTACATGACTGATCAAGGCAGCTCTGTTTAGACATAATTAAGTTAGGTAAATCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| CDS-3UTR GCA 90 bp | CCTCTACTGCAGTTTTATATCCATCCACAGAACACAGTTAGCCCACTGGGAACCGGCAGACATGACAACTaGGCAGCTGCTCAGACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: PLLQFYIHPQNTVSPLGTGRHDN*AAAQTA Trigger: CGCGGTCTGAGCAGCTGCGCAGTTGTCATGTCTGCC...GGTTCCCAGTGGGCTAACTGTGTTCTGTGGATGGATATAAAACTGCAGTAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
||
| CDS-3UTR CCA 90 bp | CAGAGTGGTAAGAATCTCACATCCTTCAATATGGTGAGGCTCAGAGGCAGCAACTGTCTCCCCTGGAGATaGCAGCTCCAGTGCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSGKNLTSFNMVRLRGSNCLPWR*QLQCTL Trigger: CAGGGTGCACTGGAGCTGCCATCTCCAGGGGAGACA...GTTGCTGCCTCTGAGCCTCACCATATTGAAGGATGTGAGATTCTTACCACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTTTGAGGACAACAGTAGTCCCCAAGGTGCAGGCTaGGTCGTAGTACAGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCDFEDNSSPQGAG*VVVQLM Trigger: CATGAGCTGTACTACGACGCAGCCTGCACCTTGGGG...ACTACTGTTGTCCTCAAAGTCACACACACACACACACACACACACACACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| CDS-3UTR CCA 90 bp | CTACTTGACGCACCCAAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGTGTCTCCCCTGGAGATaGCAGCTCCAGTGCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLDAPKQCPINPDYMSMVCLPWR*QLQCTL Trigger: CAGGGTGCACTGGAGCTGCCATCTCCAGGGGAGACA...CACCATACTCATATAGTCTGGATTTATTGGGCACTGTTTGGGTGCGTCAAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| CDS-3UTR CCA 90 bp | CCATCTCATTCAGATCAAAGAGGAAGTACAAAATCTACAACAGTTTGGGGGTGCCTGCCTCGCCTTGGGTaGAGCAGCTTCTGCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSHSDQRGSTKSTTVWGCLPRLG*SSFCLG Trigger: GCCCAAGCAGAAGCTGCTCCACCCAAGGCGAGGCAG...GCACCCCCAAACTGTTGTAGATTTTGTACTTCCTCTTTGATCTGAATGAGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTACTGCAGTTTTATATCCATCCACAGAACACAGTTAGCCCACTGGGAACCACATGTAGTAACGCATaGCCTTCTGCAGGCGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLQFYIHPQNTVSPLGTTCSNA*PSAGAG Trigger: ACCCGCGCCTGCAGAAGGCCATGCGTTACTACATGT...GGTTCCCAGTGGGCTAACTGTGTTCTGTGGATGGATATAAAACTGCAGTAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTTTGAGGACAACAGTAGTAAGCCATTTGGGGCCTaGTCCCATTTCTGTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCDFEDNSSKPFGA*SHFCGS Trigger: GGACCCACAGAAATGGGATCAGGCCCCAAATGGCTT...ACTACTGTTGTCCTCAAAGTCACACACACACACACACACACACACACACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTTTGAGGACAACAGTAGTGCACTGTCAATGAAGTaGTGGCTGGGGTTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCDFEDNSSALSMK*WLGLAR Trigger: TCTGGCCAACCCCAGCCATCACTTCATTGACAGTGC...ACTACTGTTGTCCTCAAAGTCACACACACACACACACACACACACACACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| CDS-3UTR CCA 90 bp | TCTAATGCAGCAGATGTCCTCTACTGCAGTTTTATATCCATCCACAGAACACAGTCCCCAGGCCAAGGGTaGAAAGGGTTCTCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNAADVLYCSFISIHRTQSPGQG*KGFSGW Trigger: CCACCCTGAGAACCCTTTCCACCCTTGGCCTGGGGA...CTGTGTTCTGTGGATGGATATAAAACTGCAGTAGAGGACATCTGCTGCATTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
||
| CDS-3UTR TCA 90 bp | GGTGCTCAGAGGGTGTTGCTAAAAGTAACCCAGGTTGTTACCATCGCTCAGAGTCCCAAAGCTGCCATATaGACTTGGGGTGAAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GAQRVLLKVTQVVTIAQSPKAAI*TWGEEC Trigger: ACATTCTTCACCCCAAGTTCATATGGCAGCTTTGGG...ACTCTGAGCGATGGTAACAACCTGGGTTACTTTTAGCAACACCCTCTGAGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
||
| CDS-3UTR GCA 90 bp | TTGGCAGATGTTTCGTTTGACTTCTTAGATTGTGTGGTAGGGATGGTTTGTACTGGTAGGCCCCCAAGGTaGAGGCTGCGTCGTAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LADVSFDFLDCVVGMVCTGRPPR*RLRRST Trigger: TGTACTACGACGCAGCCTGCACCTTGGGGGCCTACC...AGTACAAACCATCCCTACCACACAATCTAAGAAGTCAAACGAAACATCTGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| CDS-3UTR CCA 90 bp | CTTGATCAGTCATGTAGCCATGGGGTAATATTTGACTATCAGAAAGTCAAACAGCTGCCTCGCCTTGGGTaGAGCAGCTTCTGCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LDQSCSHGVIFDYQKVKQLPRLG*SSFCLG Trigger: GCCCAAGCAGAAGCTGCTCCACCCAAGGCGAGGCAG...CTGTTTGACTTTCTGATAGTCAAATATTACCCCATGGCTACATGACTGATCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| CDS-3UTR CCA 90 bp | GAAAGCTCCAAGGACCACTGGAGAAAATTCATACAACATGAACAATGCCTCCTCACATGTAGTAACGCATaGCCTTCTGCAGGCGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESSKDHWRKFIQHEQCLLTCSNA*PSAGAG Trigger: ACCCGCGCCTGCAGAAGGCCATGCGTTACTACATGT...GAGGAGGCATTGTTCATGTTGTATGAATTTTCTCCAGTGGTCCTTGGAGCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| CDS-3UTR TCA 90 bp | CAGAGTGGTAAGAATCTCACATCCTTCAATATGGTGAGGCTCAGAGGCAGCAACATAGAAAGCGCTTTGTaGTTTCCTCCCAACCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSGKNLTSFNMVRLRGSNIESAL*FPPNLG Trigger: TCCCAGGTTGGGAGGAAATCACAAAGCGCTTTCTAT...GTTGCTGCCTCTGAGCCTCACCATATTGAAGGATGTGAGATTCTTACCACTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
||
| CDS-3UTR TCA 90 bp | GAATCTCACATCCTTCAATATGGTGAGGCTCAGAGGCAGCAACTATATCTAATGGCACTGTCAATGAAGTaGTGGCTGGGGTTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ESHILQYGEAQRQQLYLMALSMK*WLGLAR Trigger: TCTGGCCAACCCCAGCCATCACTTCATTGACAGTGC...CATTAGATATAGTTGCTGCCTCTGAGCCTCACCATATTGAAGGATGTGAGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
||
| CDS-3UTR GCA 90 bp | CAGAGTGGTAAGAATCTCACATCCTTCAATATGGTGAGGCTCAGAGGCAGCAACTGTCCAGCAGCACTTTaGTTGCATCCAAACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSGKNLTSFNMVRLRGSNCPAAL*LHPNFW Trigger: CCAGAAGTTTGGATGCAAGCAAAGTGCTGCTGGACA...GTTGCTGCCTCTGAGCCTCACCATATTGAAGGATGTGAGATTCTTACCACTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
||
| CDS-3UTR GCA 90 bp | TCATACAACATGAACAATGCCTCCTCTAGAGTTACCGAGATGATTAGACATGTCAGATGGCAGCTCCAGTaGACCCTGCCTGTGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SYNMNNASSRVTEMIRHVRWQLQ*TLPVVV Trigger: TACCACCACAGGCAGGGTGCACTGGAGCTGCCATCT...GACATGTCTAATCATCTCGGTAACTCTAGAGGAGGCATTGTTCATGTTGTATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| CDS-3UTR GCA 90 bp | TATCTAATGCAGCAGATGTCCTCTACTGCAGTTTTATATCCATCCACAGAACACAGATGGCAGCTCCAGTaGACCCTGCCTGTGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YLMQQMSSTAVLYPSTEHRWQLQ*TLPVVV Trigger: TACCACCACAGGCAGGGTGCACTGGAGCTGCCATCT...GTGTTCTGTGGATGGATATAAAACTGCAGTAGAGGACATCTGCTGCATTAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| CDS-3UTR GCA 90 bp | ACACTGACCTCAATAAGTTATTCTTTAATCAAGTTCTCAGGCCATCTAAGGGCACTTCCTCAGGCAAGCTaGCTCGCCTTGGGTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLTSISYSLIKFSGHLRALPQAS*LALGGA Trigger: TGCTCCACCCAAGGCGAGGCAGCTTGCCTGAGGAAG...TGCCCTTAGATGGCCTGAGAACTTGATTAAAGAATAACTTATTGAGGTCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR CCA 90 bp | GGGTGGAAGTATTTAATCACTATCTGGCAAAATATTGCCTGTTGGGACACATTTTCCCCAGGCCAAGGGTaGAAAGGGTTCTCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWKYLITIWQNIACWDTFSPGQG*KGFSGW Trigger: CCACCCTGAGAACCCTTTCCACCCTTGGCCTGGGGA...AAATGTGTCCCAACAGGCAATATTTTGCCAGATAGTGATTAAATACTTCCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR CCA 90 bp | GAAAGCTCCAAGGACCACTGGAGAAAATTCATACAACATGAACAATGCCTCCTCCTTTTCATAGAGCAGTaGGTGGTAGGCCCCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESSKDHWRKFIQHEQCLLLFIEQ*VVGPQG Trigger: ACCTTGGGGGCCTACCACCCACTGCTCTATGAAAAG...GAGGAGGCATTGTTCATGTTGTATGAATTTTCTCCAGTGGTCCTTGGAGCTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR TCA 90 bp | ATCTCATTCAGATCAAAGAGGAAGTACAAAATCTACAACAGTTTGGGGGTGCTCAAGCCATTTGGGGCCTaGTCCCATTTCTGTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISFRSKRKYKIYNSLGVLKPFGA*SHFCGS Trigger: GGACCCACAGAAATGGGATCAGGCCCCAAATGGCTT...GAGCACCCCCAAACTGTTGTAGATTTTGTACTTCCTCTTTGATCTGAATGAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| CDS-3UTR GCA 90 bp | TTGTCTAAATCTATCTTCAAGTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGCAGACATGACAACTaGGCAGCTGCTCAGACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSKSIFKYFVCVCVCVCVGRHDN*AAAQTA Trigger: CGCGGTCTGAGCAGCTGCGCAGTTGTCATGTCTGCC...CACACACACACACACACACACACACACAAAATACTTGAAGATAGATTTAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR CCA 90 bp | CCATCTCATTCAGATCAAAGAGGAAGTACAAAATCTACAACAGTTTGGGGGTGCAAAGGGTTCTCAGGGTaGCTGTCCAGCAGCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSHSDQRGSTKSTTVWGCKGFSG*LSSSTL Trigger: CAAAGTGCTGCTGGACAGCCACCCTGAGAACCCTTT...GCACCCCCAAACTGTTGTAGATTTTGTACTTCCTCTTTGATCTGAATGAGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| CDS-3UTR CCA 90 bp | TGTAGCCATGGGGTAATATTTGACTATCAGAAAGTCAAACAGAAATTGGCAGTGCTGATCCCATTTCTGTaGGTCCCCAGGCCAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSHGVIFDYQKVKQKLAVLIPFL*VPRPRV Trigger: CACCCTTGGCCTGGGGACCCACAGAAATGGGATCAG...CACTGCCAATTTCTGTTTGACTTTCTGATAGTCAAATATTACCCCATGGCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR CCA 90 bp | GGTGCTCAGAGGGTGTTGCTAAAAGTAACCCAGGTTGTTACCATCGCTCAGAGTGTGAAGAATGTAAAATaGCTGAGTCGGGTATTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GAQRVLLKVTQVVTIAQSVKNVK*LSRVFP Trigger: CGGAAATACCCGACTCAGCCATTTTACATTCTTCAC...ACTCTGAGCGATGGTAACAACCTGGGTTACTTTTAGCAACACCCTCTGAGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| CDS-3UTR TCA 90 bp | AAAACACAAAGGACTATGACATCTGTTAGTCTTCAGGGAACAAACAGCACCGGGATAAAGCACTGTCAATaGAGTGATGGCTGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTQRTMTSVSLQGTNSTGIKHCQ*SDGWGW Trigger: CCAACCCCAGCCATCACTTCATTGACAGTGCTTTAT...CCCGGTGCTGTTTGTTCCCTGAAGACTAACAGATGTCATAGTCCTTTGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR CAA 72 bp | GGGAGGATAGTTAGTGTTGCTGTTTCACAGGTACTGTaGGGTCACTTAAGGATAGTAAATGTGGGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRIVSVAVSQVL*GHLRIVNVGWK Trigger: CTTCCACCCCACATTTACTATCCTTAAGTGACCCAACAGTACCTGTGAAACAGCAACACTAACTATCCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR TCA 90 bp | GAAAGCTCCAAGGACCACTGGAGAAAATTCATACAACATGAACAATGCCTCCTCGGGTTGGCCAGAATCTaGGAATTAATGATGCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ESSKDHWRKFIQHEQCLLGLARI*ELMMRT Trigger: AGTACGCATCATTAATTCTCAGATTCTGGCCAACCC...GAGGAGGCATTGTTCATGTTGTATGAATTTTCTCCAGTGGTCCTTGGAGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR CCA 90 bp | GGTAAGAATCTCACATCCTTCAATATGGTGAGGCTCAGAGGCAGCAACTATATCAAAACCAGAAGATGGTaGGTTGGGCTGTATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKNLTSFNMVRLRGSNYIKTRRW*VGLYLL Trigger: GAGAAGATACAGCCCAACCCACCATCTTCTGGTTTT...GATATAGTTGCTGCCTCTGAGCCTCACCATATTGAAGGATGTGAGATTCTTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| CDS-3UTR CCA 90 bp | AAACAGTGCCCAATAAATCCAGACTATATGAGTATGGTGAGCTGGCAACACAGGTGTCTGTCGAACAGATaGGATGTACTCATACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: KQCPINPDYMSMVSWQHRCLSNR*DVLIHV Trigger: CACGTGTATGAGTACATCCCATCTGTTCGACAGACA...CCTGTGTTGCCAGCTCACCATACTCATATAGTCTGGATTTATTGGGCACTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| 3UTR CAA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTTaGAGGACAACAGTAGTACCTTATTGCACATCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVT*RTTVVPYCTSV Trigger: AACTGATGTGCAATAAGGTACTACTGTTGTCCTCAAAGTCACACACACACACACACACACACACACACACAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR CAA 72 bp | TATGCTGCAGGCAGACAAAGGTGCTGTTCTTCACTGTaGGCAGATGTTTCGTTTGACTTCTTAGATTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YAAGRQRCCSSL*ADVSFDFLDCV Trigger: CACACAATCTAAGAAGTCAAACGAAACATCTGCCAACAGTGAAGAACAGCACCTTTGTCTGCCTGCAGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR CAA 72 bp | TGGCAACACAGGCTGAACTCTGTTCCAACAGATGTATaGGTTCATAAACATAACAGAGTAAGCCAGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WQHRLNSVPTDV*VHKHNRVSQAL Trigger: AAGGGCCTGGCTTACTCTGTTATGTTTATGAACCAATACATCTGTTGGAACAGAGTTCAGCCTGTGTTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR TCA 90 bp | GGGGTGGAAGTATTTAATCACTATCTGGCAAAATATTGCCTGTTGGGACACATTATAGAAAGCGCTTTGTaGTTTCCTCCCAACCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVEVFNHYLAKYCLLGHIIESAL*FPPNLG Trigger: TCCCAGGTTGGGAGGAAATCACAAAGCGCTTTCTAT...AATGTGTCCCAACAGGCAATATTTTGCCAGATAGTGATTAAATACTTCCACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR TCA 90 bp | TATCTAATGCAGCAGATGTCCTCTACTGCAGTTTTATATCCATCCACAGAACACATAAAGCACTGTCAATaGAGTGATGGCTGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YLMQQMSSTAVLYPSTEHIKHCQ*SDGWGW Trigger: CCAACCCCAGCCATCACTTCATTGACAGTGCTTTAT...GTGTTCTGTGGATGGATATAAAACTGCAGTAGAGGACATCTGCTGCATTAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| CDS-3UTR GCA 90 bp | TCATACAACATGAACAATGCCTCCTCTAGAGTTACCGAGATGATTAGACATGTCTGTCCAGCAGCACTTTaGTTGCATCCAAACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SYNMNNASSRVTEMIRHVCPAAL*LHPNFW Trigger: CCAGAAGTTTGGATGCAAGCAAAGTGCTGCTGGACA...GACATGTCTAATCATCTCGGTAACTCTAGAGGAGGCATTGTTCATGTTGTATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR CCA 90 bp | GAATGCAGGCATGATTTACCTAACTTAATTATGTCTAAACAGAGCTGCCTTGATAAAGGGTTCTCAGGGTaGCTGTCCAGCAGCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ECRHDLPNLIMSKQSCLDKGFSG*LSSSTL Trigger: CAAAGTGCTGCTGGACAGCCACCCTGAGAACCCTTT...ATCAAGGCAGCTCTGTTTAGACATAATTAAGTTAGGTAAATCATGCCTGCATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR CCA 90 bp | GGTAAGAATCTCACATCCTTCAATATGGTGAGGCTCAGAGGCAGCAACTATATCTATTTCCGGCGATGCTaGATATATGGAGTGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKNLTSFNMVRLRGSNYIYFRRC*IYGVKR Trigger: CCTTTTCACTCCATATATCCAGCATCGCCGGAAATA...GATATAGTTGCTGCCTCTGAGCCTCACCATATTGAAGGATGTGAGATTCTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| CDS-3UTR CCA 90 bp | GAATGCAGGCATGATTTACCTAACTTAATTATGTCTAAACAGAGCTGCCTTGATAAGGGTCTGGAAGCCTaGCAAGACTACCTTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ECRHDLPNLIMSKQSCLDKGLEA*QDYLAL Trigger: AAGGGCAAGGTAGTCTTGCCAGGCTTCCAGACCCTT...ATCAAGGCAGCTCTGTTTAGACATAATTAAGTTAGGTAAATCATGCCTGCATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR CAA 72 bp | CAGAGAACACTGGGAAGCAAAACTGCGAAGCTGTTGTaGAAAATCCTGTGCCTGACAGTATATGTGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRTLGSKTAKLL*KILCLTVYVKK Trigger: TTTCTTCACATATACTGTCAGGCACAGGATTTTCAACAACAGCTTCGCAGTTTTGCTTCCCAGTGTTCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| 3UTR CAA 72 bp | TGTGGTAGGGATGGTTTGTACTTTTGTAAGTGTAGCTaGGTTCTCAGCTGTAACATTCAGAGAACACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGRDGLYFCKCS*VLSCNIQRTLG Trigger: TCCCAGTGTTCTCTGAATGTTACAGCTGAGAACCAAGCTACACTTACAAAAGTACAAACCATCCCTACCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR TCA 90 bp | TCTAATGCAGCAGATGTCCTCTACTGCAGTTTTATATCCATCCACAGAACACAGGCTGGATATATGGAGTaGAAAGGTTGTAATCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNAADVLYCSFISIHRTQAGYME*KGCNLA Trigger: AGCCAGATTACAACCTTTTCACTCCATATATCCAGC...CTGTGTTCTGTGGATGGATATAAAACTGCAGTAGAGGACATCTGCTGCATTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| CDS-3UTR CCA 90 bp | GGTAAGAATCTCACATCCTTCAATATGGTGAGGCTCAGAGGCAGCAACTATATCAATAAAACCAGAAGATaGTGGGTTGGGCTGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKNLTSFNMVRLRGSNYINKTRR*WVGLYL Trigger: AAGATACAGCCCAACCCACCATCTTCTGGTTTTATT...GATATAGTTGCTGCCTCTGAGCCTCACCATATTGAAGGATGTGAGATTCTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| CDS-3UTR TCA 90 bp | GAATGCAGGCATGATTTACCTAACTTAATTATGTCTAAACAGAGCTGCCTTGATCCCAAAGCTGCCATATaGACTTGGGGTGAAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ECRHDLPNLIMSKQSCLDPKAAI*TWGEEC Trigger: ACATTCTTCACCCCAAGTTCATATGGCAGCTTTGGG...ATCAAGGCAGCTCTGTTTAGACATAATTAAGTTAGGTAAATCATGCCTGCATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR CCA 90 bp | GGGGTGGAAGTATTTAATCACTATCTGGCAAAATATTGCCTGTTGGGACACATTTATTTCCGGCGATGCTaGATATATGGAGTGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVEVFNHYLAKYCLLGHIYFRRC*IYGVKR Trigger: CCTTTTCACTCCATATATCCAGCATCGCCGGAAATA...AATGTGTCCCAACAGGCAATATTTTGCCAGATAGTGATTAAATACTTCCACCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR TCA 90 bp | TATCTGGCAAAATATTGCCTGTTGGGACACATTTTGTTAATACAAGAAGCAGCCGCTGGATATATGGAGTaGAAAGGTTGTAATCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLAKYCLLGHILLIQEAAAGYME*KGCNLA Trigger: AGCCAGATTACAACCTTTTCACTCCATATATCCAGC...GGCTGCTTCTTGTATTAACAAAATGTGTCCCAACAGGCAATATTTTGCCAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR CCA 90 bp | TTGTCTAAATCTATCTTCAAGTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAACCAGAAGATGGTaGGTTGGGCTGTATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSKSIFKYFVCVCVCVCVKTRRW*VGLYLL Trigger: GAGAAGATACAGCCCAACCCACCATCTTCTGGTTTT...CACACACACACACACACACACACACACAAAATACTTGAAGATAGATTTAGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR CCA 90 bp | TTGTCTAAATCTATCTTCAAGTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGAAGAATGTAAAATaGCTGAGTCGGGTATTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSKSIFKYFVCVCVCVCVVKNVK*LSRVFP Trigger: CGGAAATACCCGACTCAGCCATTTTACATTCTTCAC...CACACACACACACACACACACACACACAAAATACTTGAAGATAGATTTAGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR CCA 90 bp | GAATGCAGGCATGATTTACCTAACTTAATTATGTCTAAACAGAGCTGCCTTGATAATAAAACCAGAAGATaGTGGGTTGGGCTGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ECRHDLPNLIMSKQSCLDNKTRR*WVGLYL Trigger: AAGATACAGCCCAACCCACCATCTTCTGGTTTTATT...ATCAAGGCAGCTCTGTTTAGACATAATTAAGTTAGGTAAATCATGCCTGCATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS CCA 90 bp | GCAGCTGCTCAGACCGCGCGGGTGCAACTGGCTCAGAGGTACACCTaGTACCAGAGGCCGCCAGCCCAGCCCCGAGAAGGGCGCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAAQTARVQLAQRYT*YQRPPAQPREGRLS Trigger: AGAGAGGCGCCCTTCTCGGGGCTGGGCTGGCGGCCTCTGGTACCAGGTGTACCTCTGAGCCAGTTGCACCCGCGCGGTCTGAGCAGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 90 bp | CTGGTACCAGAGGCCGCCAGCCCAGCCCCGAGAAGGGCGCCTCTCTaGCGTCCAACGTGCGCACACGCACACGTCTGCGCATCTCACACA | + |
|
Preference number: 5 (lower is better) Translates to: LVPEAASPAPRRAPL*RPTCAHAHVCASHT Trigger: TGTGTGAGATGCGCAGACGTGTGCGTGTGCGCACGTTGGACGGCAGAGAGGCGCCCTTCTCGGGGCTGGGCTGGCGGCCTCTGGTACCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 90 bp | GCACCGGCAGACATGACAACTGCGCAGCTGCTCAGACCGCGCGGGTaGAACTGGCTCAGAGGTACACCTGGTACCAGAGGCCGCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: APADMTTAQLLRPRG*NWLRGTPGTRGRQP Trigger: GGGCTGGCGGCCTCTGGTACCAGGTGTACCTCTGAGCCAGTTGCACCCGCGCGGTCTGAGCAGCTGCGCAGTTGTCATGTCTGCCGGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS CCA 90 bp | GCAGACATGACAACTGCGCAGCTGCTCAGACCGCGCGGGTGCAACTaGCTCAGAGGTACACCTGGTACCAGAGGCCGCCAGCCCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ADMTTAQLLRPRGCN*LRGTPGTRGRQPSP Trigger: GGGGCTGGGCTGGCGGCCTCTGGTACCAGGTGTACCTCTGAGCCAGTTGCACCCGCGCGGTCTGAGCAGCTGCGCAGTTGTCATGTCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 90 bp | CTCCCCCAAGGAGGAGTTCAGGATGGCACCGGCAGACATGACAACTaGGCAGCTGCTCAGACCGCGCGGGTGCAACTGGCTCAGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LPQGGVQDGTGRHDN*AAAQTARVQLAQRY Trigger: GTACCTCTGAGCCAGTTGCACCCGCGCGGTCTGAGCAGCTGCGCAGTTGTCATGTCTGCCGGTGCCATCCTGAACTCCTCCTTGGGGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS TCA 90 bp | GGCCCCCTTCCAGAGCCGGTACAGGAAGGCTCTCGACATGGAGGCTaGCAGCATGTCGCTGTCATAGGCTTCCTCAGGCAAGCTGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GPLPEPVQEGSRHGG*QHVAVIGFLRQAAS Trigger: CGAGGCAGCTTGCCTGAGGAAGCCTATGACAGCGACATGCTGTCAGCCTCCATGTCGAGAGCCTTCCTGTACCGGCTCTGGAAGGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS CCA 90 bp | AGGACACGGCCCCCTTCCAGAGCCGGTACAGGAAGGCTCTCGACATaGAGGCTGACAGCATGTCGCTGTCATAGGCTTCCTCAGGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTRPPSRAGTGRLST*RLTACRCHRLPQAS Trigger: GCTTGCCTGAGGAAGCCTATGACAGCGACATGCTGTCAGCCTCCATGTCGAGAGCCTTCCTGTACCGGCTCTGGAAGGGGGCCGTGTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 90 bp | CTTCTGGGCAAAGAGGGTTCCTGCAAAGCGCCCATGATGACCCGCTaGTTGCCCTGTAGAGGCAGGAGCCCACGTCTCTCCAGGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLGKEGSCKAPMMTR*LPCRGRSPRLSRKE Trigger: TTCCTTCCTGGAGAGACGTGGGCTCCTGCCTCTACAGGGCAAGCAGCGGGTCATCATGGGCGCTTTGCAGGAACCCTCTTTGCCCAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 90 bp | TGGAGGCTGACAGCATGTCGCTGTCATAGGCTTCCTCAGGCAAGCTaGCTCGCCTTGGGTGGAGCAGCTTCTGCTTGGGCTGAACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WRLTACRCHRLPQAS*LALGGAASAWAEQV Trigger: GACCTGTTCAGCCCAAGCAGAAGCTGCTCCACCCAAGGCGAGGCAGCTTGCCTGAGGAAGCCTATGACAGCGACATGCTGTCAGCCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS TCA 90 bp | GGACACCGAAGGGTCTGGAAGCCTGGCAAGACTACCTTGCCCTTGTaGTGCAAGTCTGCCTGGGTGCCAGTGTTAAGGCGCTGCACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GHRRVWKPGKTTLPL*CKSAWVPVLRRCTS Trigger: ACTGGTGCAGCGCCTTAACACTGGCACCCAGGCAGACTTGCATCACAAGGGCAAGGTAGTCTTGCCAGGCTTCCAGACCCTTCGGTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
||
| CDS GCA 90 bp | AGCAGCACTTTGCTTGCATCCAAACTTCTGGGCAAAGAGGGTTCCTaGAAAGCGCCCATGATGACCCGCTGCTTGCCCTGTAGAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSTLLASKLLGKEGS*KAPMMTRCLPCRGR Trigger: CCTGCCTCTACAGGGCAAGCAGCGGGTCATCATGGGCGCTTTGCAGGAACCCTCTTTGCCCAGAAGTTTGGATGCAAGCAAAGTGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 90 bp | GCCAAGGGTGGAAAGGGTTCTCAGGGTGGCTGTCCAGCAGCACTTTaGTTGCATCCAAACTTCTGGGCAAAGAGGGTTCCTGCAAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AKGGKGSQGGCPAAL*LHPNFWAKRVPAKR Trigger: GCGCTTTGCAGGAACCCTCTTTGCCCAGAAGTTTGGATGCAAGCAAAGTGCTGCTGGACAGCCACCCTGAGAACCCTTTCCACCCTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS CCA 90 bp | TGTATTGTTGGGGCTGGTTACTGGACACCGAAGGGTCTGGAAGCCTaGCAAGACTACCTTGCCCTTGTGATGCAAGTCTGCCTGGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: CIVGAGYWTPKGLEA*QDYLALVMQVCLGA Trigger: GGCACCCAGGCAGACTTGCATCACAAGGGCAAGGTAGTCTTGCCAGGCTTCCAGACCCTTCGGTGTCCAGTAACCAGCCCCAACAATACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS GCA 90 bp | CAGGAGCCCACGTCTCTCCAGGAAGGAAAAGGAGCTGGGCATAGGTaGCGCAGGATTGCTGTTGGTGAAGTAGATGAAAATTGCCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: QEPTSLQEGKGAGHR*RRIAVGEVDENCQK Trigger: TTTTTGGCAATTTTCATCTACTTCACCAACAGCAATCCTGCGGCACCTATGCCCAGCTCCTTTTCCTTCCTGGAGAGACGTGGGCTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS-3UTR CAA 90 bp | GGTGCTCAGAGGGTGTTGCTAAAAGTAACCCAGGTTGTTACCATCGCTCAGAGTCCAGAAGATGGTGGGTaGGGCTGTATCTTCTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: GAQRVLLKVTQVVTIAQSPEDGG*GCIFSL Trigger: AAGGGAGAAGATACAGCCCAACCCACCATCTTCTGG...ACTCTGAGCGATGGTAACAACCTGGGTTACTTTTAGCAACACCCTCTGAGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| CDS-3UTR CAA 90 bp | GGTGCTCAGAGGGTGTTGCTAAAAGTAACCCAGGTTGTTACCATCGCTCAGAGTCATTCGTTGTCGCCATaGCTTCAAGTGTGGTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: GAQRVLLKVTQVVTIAQSHSLSP*LQVWFH Trigger: ATGAAACCACACTTGAAGCAATGGCGACAACGAATG...ACTCTGAGCGATGGTAACAACCTGGGTTACTTTTAGCAACACCCTCTGAGCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| CDS CCA 90 bp | GTAGTACAGCTCATGGTAGTGGCAAAGCTCTGTCTGTCGAACAGATaGGATGTACTCATACACGTGCACCTCTTTACACATGGACATCAT | + |
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Preference number: 5 (lower is better) Translates to: VVQLMVVAKLCLSNR*DVLIHVHLFTHGHH Trigger: ATGATGTCCATGTGTAAAGAGGTGCACGTGTATGAGTACATCCCATCTGTTCGACAGACAGAGCTTTGCCACTACCATGAGCTGTACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS CCA 90 bp | AATGTCCCAAAGCTGCCATATGAACTTGGGGTGAAGAATGTAAAATaGCTGAGTCGGGTATTTCCGGCGATGCTGGATATATGGAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: NVPKLPYELGVKNVK*LSRVFPAMLDIWSE Trigger: TTCACTCCATATATCCAGCATCGCCGGAAATACCCGACTCAGCCATTTTACATTCTTCACCCCAAGTTCATATGGCAGCTTTGGGACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 |
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| CDS-3UTR CAA 90 bp | GAAAGCTCCAAGGACCACTGGAGAAAATTCATACAACATGAACAATGCCTCCTCCATTCGTTGTCGCCATaGCTTCAAGTGTGGTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: ESSKDHWRKFIQHEQCLLHSLSP*LQVWFH Trigger: ATGAAACCACACTTGAAGCAATGGCGACAACGAATG...GAGGAGGCATTGTTCATGTTGTATGAATTTTCTCCAGTGGTCCTTGGAGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR CAA 90 bp | CCATCTCATTCAGATCAAAGAGGAAGTACAAAATCTACAACAGTTTGGGGGTGCTCCAAAGAGCATTCGTaGTCGCCATTGCTTCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: PSHSDQRGSTKSTTVWGCSKEHS*SPLLQV Trigger: CACTTGAAGCAATGGCGACAACGAATGCTCTTTGGA...GCACCCCCAAACTGTTGTAGATTTTGTACTTCCTCTTTGATCTGAATGAGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086878.10 |
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| CDS-3UTR CAA 90 bp | TGTAGCCATGGGGTAATATTTGACTATCAGAAAGTCAAACAGAAATTGGCAGTGCCAGCAGCACTTTGCTaGCATCCAAACTTCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: CSHGVIFDYQKVKQKLAVPAALC*HPNFWA Trigger: TGCCCAGAAGTTTGGATGCAAGCAAAGTGCTGCTGG...CACTGCCAATTTCTGTTTGACTTTCTGATAGTCAAATATTACCCCATGGCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS-3UTR CAA 90 bp | GGGTGGAAGTATTTAATCACTATCTGGCAAAATATTGCCTGTTGGGACACATTTCCAGAAGATGGTGGGTaGGGCTGTATCTTCTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: GWKYLITIWQNIACWDTFPEDGG*GCIFSL Trigger: AAGGGAGAAGATACAGCCCAACCCACCATCTTCTGG...AAATGTGTCCCAACAGGCAATATTTTGCCAGATAGTGATTAAATACTTCCACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS CCA 90 bp | GTATTTCCGGCGATGCTGGATATATGGAGTGAAAAGGTTGTAATCTaGCTTCTTATACCACAGGTTAAGATTGGCAGAATAAGGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: VFPAMLDIWSEKVVI*LLIPQVKIGRIRSR Trigger: CCTGCTCCTTATTCTGCCAATCTTAACCTGTGGTATAAGAAGCCAGATTACAACCTTTTCACTCCATATATCCAGCATCGCCGGAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 |
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| CDS CCA 90 bp | AATGTAAAATGGCTGAGTCGGGTATTTCCGGCGATGCTGGATATATaGAGTGAAAAGGTTGTAATCTGGCTTCTTATACCACAGGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: NVKWLSRVFPAMLDI*SEKVVIWLLIPQVK Trigger: CTTAACCTGTGGTATAAGAAGCCAGATTACAACCTTTTCACTCCATATATCCAGCATCGCCGGAAATACCCGACTCAGCCATTTTACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 |
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| CDS-3UTR CAA 90 bp | GGGTGGAAGTATTTAATCACTATCTGGCAAAATATTGCCTGTTGGGACACATTTTCCAAAGAGCATTCGTaGTCGCCATTGCTTCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: GWKYLITIWQNIACWDTFSKEHS*SPLLQV Trigger: CACTTGAAGCAATGGCGACAACGAATGCTCTTTGGA...AAATGTGTCCCAACAGGCAATATTTTGCCAGATAGTGATTAAATACTTCCACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS GCA 72 bp | GAGGCCGCCAGCCCAGCCCCGAGAAGGGCGCCTCTCTaGCGTCCAACGTGCGCACACGCACACGTCTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: EAASPAPRRAPL*RPTCAHAHVCA Trigger: TGCGCAGACGTGTGCGTGTGCGCACGTTGGACGGCAGAGAGGCGCCCTTCTCGGGGCTGGGCTGGCGGCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS CCA 72 bp | CAGACCGCGCGGGTGCAACTGGCTCAGAGGTACACCTaGTACCAGAGGCCGCCAGCCCAGCCCCGAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QTARVQLAQRYT*YQRPPAQPREG Trigger: CCCTTCTCGGGGCTGGGCTGGCGGCCTCTGGTACCAGGTGTACCTCTGAGCCAGTTGCACCCGCGCGGTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 72 bp | CCAGCCCCGAGAAGGGCGCCTCTCTGCCGTCCAACGTaGGCACACGCACACGTCTGCGCATCTCACACAGCA | + |
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Preference number: 6 (lower is better) Translates to: PAPRRAPLCRPT*AHAHVCASHTA Trigger: TGCTGTGTGAGATGCGCAGACGTGTGCGTGTGCGCACGTTGGACGGCAGAGAGGCGCCCTTCTCGGGGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS TCA 72 bp | CCCCCAAGGAGGAGTTCAGGATGGCACCGGCAGACATaGCAACTGCGCAGCTGCTCAGACCGCGCGGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: PPRRSSGWHRQT*QLRSCSDRAGA Trigger: TGCACCCGCGCGGTCTGAGCAGCTGCGCAGTTGTCATGTCTGCCGGTGCCATCCTGAACTCCTCCTTGGGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS CCA 72 bp | ACAACTGCGCAGCTGCTCAGACCGCGCGGGTGCAACTaGCTCAGAGGTACACCTGGTACCAGAGGCCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TTAQLLRPRGCN*LRGTPGTRGRQ Trigger: CTGGCGGCCTCTGGTACCAGGTGTACCTCTGAGCCAGTTGCACCCGCGCGGTCTGAGCAGCTGCGCAGTTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 72 bp | GGAGGAGTTCAGGATGGCACCGGCAGACATGACAACTaGGCAGCTGCTCAGACCGCGCGGGTGCAACTGGCT | + |
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Preference number: 6 (lower is better) Translates to: GGVQDGTGRHDN*AAAQTARVQLA Trigger: AGCCAGTTGCACCCGCGCGGTCTGAGCAGCTGCGCAGTTGTCATGTCTGCCGGTGCCATCCTGAACTCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 72 bp | GACATGACAACTGCGCAGCTGCTCAGACCGCGCGGGTaGAACTGGCTCAGAGGTACACCTGGTACCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: DMTTAQLLRPRG*NWLRGTPGTRG Trigger: GCCTCTGGTACCAGGTGTACCTCTGAGCCAGTTGCACCCGCGCGGTCTGAGCAGCTGCGCAGTTGTCATGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS TCA 72 bp | GCCGACCCCGCCTGCGGAAGCGCACACCATGCTTGTTaGAGGACATGTAGTAACGCATGGCCTTCTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ADPACGSAHHAC*RTCSNAWPSAG Trigger: GCCTGCAGAAGGCCATGCGTTACTACATGTCCTTCAACAAGCATGGTGTGCGCTTCCGCAGGCGGGGTCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 72 bp | AAAGAGGGTTCCTGCAAAGCGCCCATGATGACCCGCTaGTTGCCCTGTAGAGGCAGGAGCCCACGTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KEGSCKAPMMTR*LPCRGRSPRLS Trigger: GGAGAGACGTGGGCTCCTGCCTCTACAGGGCAAGCAGCGGGTCATCATGGGCGCTTTGCAGGAACCCTCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS CCA 72 bp | GCAAGCTGCCTCGCCTTGGGTGGAGCAGCTTCTGCTTaGGCTGAACAGGTCCTGATCGCCATGATGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: ASCLALGGAASA*AEQVLIAMMSP Trigger: GGGAGACATCATGGCGATCAGGACCTGTTCAGCCCAAGCAGAAGCTGCTCCACCCAAGGCGAGGCAGCTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS CAA 72 bp | CGCTGTCATAGGCTTCCTCAGGCAAGCTGCCTCGCCTaGGGTGGAGCAGCTTCTGCTTGGGCTGAACAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RCHRLPQASCLA*GGAASAWAEQV Trigger: GACCTGTTCAGCCCAAGCAGAAGCTGCTCCACCCAAGGCGAGGCAGCTTGCCTGAGGAAGCCTATGACAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 72 bp | ACAGCATGTCGCTGTCATAGGCTTCCTCAGGCAAGCTaGCTCGCCTTGGGTGGAGCAGCTTCTGCTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: TACRCHRLPQAS*LALGGAASAWA Trigger: AGCCCAAGCAGAAGCTGCTCCACCCAAGGCGAGGCAGCTTGCCTGAGGAAGCCTATGACAGCGACATGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS CCA 72 bp | CCCCCTTCCAGAGCCGGTACAGGAAGGCTCTCGACATaGAGGCTGACAGCATGTCGCTGTCATAGGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PPSRAGTGRLST*RLTACRCHRLP Trigger: AGGAAGCCTATGACAGCGACATGCTGTCAGCCTCCATGTCGAGAGCCTTCCTGTACCGGCTCTGGAAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS TCA 72 bp | CCAGAGCCGGTACAGGAAGGCTCTCGACATGGAGGCTaGCAGCATGTCGCTGTCATAGGCTTCCTCAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: PEPVQEGSRHGG*QHVAVIGFLRQ Trigger: TTGCCTGAGGAAGCCTATGACAGCGACATGCTGTCAGCCTCCATGTCGAGAGCCTTCCTGTACCGGCTCTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS TCA 72 bp | AGGGTCTGGAAGCCTGGCAAGACTACCTTGCCCTTGTaGTGCAAGTCTGCCTGGGTGCCAGTGTTAAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RVWKPGKTTLPL*CKSAWVPVLRR Trigger: GCGCCTTAACACTGGCACCCAGGCAGACTTGCATCACAAGGGCAAGGTAGTCTTGCCAGGCTTCCAGACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS GCA 72 bp | GACACCGAAGGGTCTGGAAGCCTGGCAAGACTACCTTaGCCTTGTGATGCAAGTCTGCCTGGGTGCCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: DTEGSGSLARLP*PCDASLPGCQC Trigger: ACACTGGCACCCAGGCAGACTTGCATCACAAGGGCAAGGTAGTCTTGCCAGGCTTCCAGACCCTTCGGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS CCA 72 bp | GGGGCTGGTTACTGGACACCGAAGGGTCTGGAAGCCTaGCAAGACTACCTTGCCCTTGTGATGCAAGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GAGYWTPKGLEA*QDYLALVMQVC Trigger: GCAGACTTGCATCACAAGGGCAAGGTAGTCTTGCCAGGCTTCCAGACCCTTCGGTGTCCAGTAACCAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS CAA 90 bp | GGCCAAGGGTGGAAAGGGTTCTCAGGGTGGCTGTCCAGCAGCACTTaGCTTGCATCCAAACTTCTGGGCAAAGAGGGTTCCTGCAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GQGWKGFSGWLSSST*LASKLLGKEGSCKA Trigger: CGCTTTGCAGGAACCCTCTTTGCCCAGAAGTTTGGATGCAAGCAAAGTGCTGCTGGACAGCCACCCTGAGAACCCTTTCCACCCTTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 72 bp | TTGCTTGCATCCAAACTTCTGGGCAAAGAGGGTTCCTaGAAAGCGCCCATGATGACCCGCTGCTTGCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLASKLLGKEGS*KAPMMTRCLPC Trigger: ACAGGGCAAGCAGCGGGTCATCATGGGCGCTTTGCAGGAACCCTCTTTGCCCAGAAGTTTGGATGCAAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS CCA 72 bp | ATTGTCAAAGCCATTTGGGGCCTGATCCCATTTCTGTaGGTCCCCAGGCCAAGGGTGGAAAGGGTTCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: IVKAIWGLIPFL*VPRPRVERVLR Trigger: CCTGAGAACCCTTTCCACCCTTGGCCTGGGGACCCACAGAAATGGGATCAGGCCCCAAATGGCTTTGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 72 bp | AGGGTTCTCAGGGTGGCTGTCCAGCAGCACTTTGCTTaGATCCAAACTTCTGGGCAAAGAGGGTTCCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: RVLRVAVQQHFA*IQTSGQRGFLQ Trigger: TTGCAGGAACCCTCTTTGCCCAGAAGTTTGGATGCAAGCAAAGTGCTGCTGGACAGCCACCCTGAGAACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 72 bp | GGAAAGGGTTCTCAGGGTGGCTGTCCAGCAGCACTTTaGTTGCATCCAAACTTCTGGGCAAAGAGGGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GKGSQGGCPAAL*LHPNFWAKRVP Trigger: AGGAACCCTCTTTGCCCAGAAGTTTGGATGCAAGCAAAGTGCTGCTGGACAGCCACCCTGAGAACCCTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS CAA 72 bp | AAGGGTTCTCAGGGTGGCTGTCCAGCAGCACTTTGCTaGCATCCAAACTTCTGGGCAAAGAGGGTTCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: KGSQGGCPAALC*HPNFWAKRVPA Trigger: TGCAGGAACCCTCTTTGCCCAGAAGTTTGGATGCAAGCAAAGTGCTGCTGGACAGCCACCCTGAGAACCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS CAA 72 bp | TGGAAAGGGTTCTCAGGGTGGCTGTCCAGCAGCACTTaGCTTGCATCCAAACTTCTGGGCAAAGAGGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: WKGFSGWLSSST*LASKLLGKEGS Trigger: GGAACCCTCTTTGCCCAGAAGTTTGGATGCAAGCAAAGTGCTGCTGGACAGCCACCCTGAGAACCCTTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS GCA 72 bp | ACGTCTCTCCAGGAAGGAAAAGGAGCTGGGCATAGGTaGCGCAGGATTGCTGTTGGTGAAGTAGATGAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: TSLQEGKGAGHR*RRIAVGEVDEN Trigger: ATTTTCATCTACTTCACCAACAGCAATCCTGCGGCACCTATGCCCAGCTCCTTTTCCTTCCTGGAGAGACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 ENSMUST00000133899.2 |
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| CDS CAA 72 bp | ACGGTTCCTAAGATGGATGAAGCTTGTCTAGCATCTTaGGCACAGCCCCAGACTGGAACTAGGAGTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TVPKMDEACLAS*AQPQTGTRSSE Trigger: CTCTGAACTCCTAGTTCCAGTCTGGGGCTGTGCCAAAGATGCTAGACAAGCTTCATCCATCTTAGGAACCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133899.2 |
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| CDS CAA 90 bp | ATGATGACTACGGTTCCTAAGATGGATGAAGCTTGTCTAGCATCTTaGGCACAGCCCCAGACTGGAACTAGGAGTTCAGAGAGCTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: MMTTVPKMDEACLAS*AQPQTGTRSSESSE Trigger: TTCTGAGCTCTCTGAACTCCTAGTTCCAGTCTGGGGCTGTGCCAAAGATGCTAGACAAGCTTCATCCATCTTAGGAACCGTAGTCATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133899.2 |
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| CDS CCA 72 bp | CTCATGGTAGTGGCAAAGCTCTGTCTGTCGAACAGATaGGATGTACTCATACACGTGCACCTCTTTACACAT | + |
|
Preference number: 6 (lower is better) Translates to: LMVVAKLCLSNR*DVLIHVHLFTH Trigger: ATGTGTAAAGAGGTGCACGTGTATGAGTACATCCCATCTGTTCGACAGACAGAGCTTTGCCACTACCATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS CCA 72 bp | AAGCTGCCATATGAACTTGGGGTGAAGAATGTAAAATaGCTGAGTCGGGTATTTCCGGCGATGCTGGATATA | + |
|
Preference number: 6 (lower is better) Translates to: KLPYELGVKNVK*LSRVFPAMLDI Trigger: TATATCCAGCATCGCCGGAAATACCCGACTCAGCCATTTTACATTCTTCACCCCAAGTTCATATGGCAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 |
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| CDS CAA 90 bp | ATGGACATCATGATGAGGATTCCAATAAAACCAGAAGATGGTGGGTaGGGCTGTATCTTCTCCCTTGTATTCTCCTGGATAATGTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: MDIMMRIPIKPEDGG*GCIFSLVFSWIMSQ Trigger: TTGGGACATTATCCAGGAGAATACAAGGGAGAAGATACAGCCCAACCCACCATCTTCTGGTTTTATTGGAATCCTCATCATGATGTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025000.4 |
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| CDS CCA 72 bp | GCGATGCTGGATATATGGAGTGAAAAGGTTGTAATCTaGCTTCTTATACCACAGGTTAAGATTGGCAGAATA | + |
|
Preference number: 6 (lower is better) Translates to: AMLDIWSEKVVI*LLIPQVKIGRI Trigger: TATTCTGCCAATCTTAACCTGTGGTATAAGAAGCCAGATTACAACCTTTTCACTCCATATATCCAGCATCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025000.4 ENSMUST00000086878.10 |
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