Pregenerated sensors for ST3GAL6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022747Ensembl transcript IDs: ENSMUST00000114357.10, ENSMUST00000114358.9, ENSMUST00000126978.8, ENSMUST00000137035.8, ENSMUST00000149456.8
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGCAAGGGCAGCCTTAGGAGATTTCAGAAAAGTTACACTAACTTaGCTGTCACTTGATCCTTGGAACCAGCACAGATATTATGAATTC | + |
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Preference number: 1 (lower is better) Translates to: VARAALGDFRKVTLT*LSLDPWNQHRYYEF Trigger: GAATTCATAATATCTGTGCTGGTTCCAAGGATCAAGTGACAGCCAAGTTAGTGTAACTTTTCTGAAATCTCCTAAGGCTGCCCTTGCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR TCA 90 bp | AAAGGAGTTGTTAATTCTACCTTTTGGGTTGAACTTGAAAGTCCTTaGACTGCAAAAACTCTAGGAAGTTGGATGGTTGTAGGGTATCTA | + |
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Preference number: 1 (lower is better) Translates to: KGVVNSTFWVELESP*TAKTLGSWMVVGYL Trigger: TAGATACCCTACAACCATCCAACTTCCTAGAGTTTTTGCAGTTCAAGGACTTTCAAGTTCAACCCAAAAGGTAGAATTAACAACTCCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTCAAGCCTACCTTATGGAAGTGAATCTGGGCAGCCCAGCTCTGTGTGGCTACTCATGTGCCTGAAATaGCCACTGAATGTTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: PSSLPYGSESGQPSSVWLLMCLK*PLNVSL Trigger: CAGTGAAACATTCAGTGGTCATTTCAGGCACATGAG...TAGCCACACAGAGCTGGGCTGCCCAGATTCACTTCCATAAGGTAGGCTTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR GCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGGTGATTCTCGTGTTCTaGACCTGGCTCCCAGTCACA | + |
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Preference number: 2 (lower is better) Translates to: DARGCSNWHIAVIPVLGKVILVF*TWLPVT Trigger: TGTGACTGGGAGCCAGGTGCAGAACACGAGAATCAC...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTGTAGCCATTTCCATGCCTTGGCTCCACGTTGTCACCCAGAGAGCAGTAAAATAACACTTCCTGTTTaGTCTCCTCCCATTCTACCC | + |
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Preference number: 2 (lower is better) Translates to: ACSHFHALAPRCHPESSKITLPV*SPPILP Trigger: GGGTAGAATGGGAGGAGAGCAAACAGGAAGTGTTAT...TTTACTGCTCTCTGGGTGACAACGTGGAGCCAAGGCATGGAAATGGCTACAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGTAGTTACAGCTATCATGTGTTCTGTGTATGCTCCTCCTCCACCTGCCCCCAGGAGGCAAATTGATTaGCATTATCACCAGCGTTTC | + |
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Preference number: 2 (lower is better) Translates to: PVVTAIMCSVYAPPPPAPRRQID*HYHQRF Trigger: GAAACGCTGGTGATAATGGCAATCAATTTGCCTCCT...GGGGGCAGGTGGAGGAGGAGCATACACAGAACACATGATAGCTGTAACTACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGTAGTTACAGCTATCATGTGTTCTGTGTATGCTCCTCCTCCACCTGCCCCCCAGAAGAAGTGGAAGTaGCTGAGTGTCAGTGATATT | + |
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Preference number: 2 (lower is better) Translates to: PVVTAIMCSVYAPPPPAPQKKWK*LSVSDI Trigger: AATATCACTGACACTCAGCCACTTCCACTTCTTCTG...GGGGGCAGGTGGAGGAGGAGCATACACAGAACACATGATAGCTGTAACTACTGG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTACAGAAGAAGTGGAAGTGGCTGAGTGTCAGTGATATTCCCCCAGAATGTCAGTACTTGGGAAGCTaGGGCAAGAAAACCAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: QVQKKWKWLSVSDIPPECQYLGS*GKKTKV Trigger: GACCTTGGTTTTCTTGCCTCAGCTTCCCAAGTACTG...ACATTCTGGGGGAATATCACTGACACTCAGCCACTTCCACTTCTTCTGTACTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR TCA 90 bp | TCACCAGCGTTTCCAATAATAACACTTCCTGTTTGCTCTCCTCCCATTCTACCCGTGTCTACTAACAGTTaGAAGGTGGAACTTGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: SPAFPIITLPVCSPPILPVSTNS*KVELAS Trigger: CGAGGCAAGTTCCACCTTTCAACTGTTAGTAGACAC...GGGTAGAATGGGAGGAGAGCAAACAGGAAGTGTTATTATTGGAAACGCTGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCACTTGATCCTTGGAACCAGCACAGATATTATGAATTCTGCTTTGCATTTACATCATTGGTCCCCCTaGCACTGTCCCTGCCGGCAA | + |
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Preference number: 2 (lower is better) Translates to: CHLILGTSTDIMNSALHLHHWSP*HCPCRQ Trigger: TTGCCGGCAGGGACAGTGGCAGGGGGACCAATGATG...TAAATGCAAAGCAGAATTCATAATATCTGTGCTGGTTCCAAGGATCAAGTGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR CCA 90 bp | GATATTCAATACTTAAGTCACTGTGGCTTAGTGGGTTTCTCTTTTCCTGATAGTGCCATTTCCATGCCTTaGCTCCACGTTGTCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: DIQYLSHCGLVGFSFPDSAISMP*LHVVTQ Trigger: CTGGGTGACAACGTGGAGCCAAGGCATGGAAATGGC...ACTATCAGGAAAAGAGAAACCCACTAAGCCACAGTGACTTAAGTATTGAATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR CAA 90 bp | TTCTACCCCCTTTGGTTGTGTCTACTAACAGTTGAAAGGTGGAACTaGCCTCGCAGGCCACCATTTGTTTGTGTTTCTTCAGATTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: FYPLWLCLLTVERWN*PRRPPFVCVSSDFS Trigger: AGAAAAATCTGAAGAAACACAAACAAATGGTGGCCTGCGAGGCAAGTTCCACCTTTCAACTGTTAGTAGACACAACCAAAGGGGGTAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGTTACACTAACTTGGCTGTCACTTGATCCTTGGAACCAGCACAGATATTATGTGGCTGAGTGTCAGTaGTATTCCCCCAGAATGTAT | + |
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Preference number: 2 (lower is better) Translates to: KVTLTWLSLDPWNQHRYYVAECQ*YSPRMY Trigger: ATACATTCTGGGGGAATATCACTGACACTCAGCCAC...ATAATATCTGTGCTGGTTCCAAGGATCAAGTGACAGCCAAGTTAGTGTAACTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR CAA 90 bp | ATTCATGTTTCACTATTTGCACTTTCCACTGAACAGTGGGTTGATTaGCTGTTCACACACAGAATTTATCCAGTAGTTACAGCTATCATG | + |
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Preference number: 2 (lower is better) Translates to: IHVSLFALSTEQWVD*LFTHRIYPVVTAIM Trigger: CATGATAGCTGTAACTACTGGATAAATTCTGTGTGTGAACAGCAAATCAACCCACTGTTCAGTGGAAAGTGCAAATAGTGAAACATGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR GCA 72 bp | CAGTGCCAGCGTCCCCATCAGTTAGGTGCTGGACACTaGCAGCATGAGCTACCCTCACTGTCAGACCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: QCQRPHQLGAGH*QHELPSLSDPS Trigger: GGAGGGGTCTGACAGTGAGGGTAGCTCATGCTGGCAGTGTCCAGCACCTAACTGATGGGGACGCTGGCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR TCA 72 bp | GGCAACTCCACAACCCTCAAGCCTACCTTATGGAAGTaGATCTGGGCAGCCCAGCTCTGTGTGGCTATAGAG | + |
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Preference number: 3 (lower is better) Translates to: GNSTTLKPTLWK*IWAAQLCVAIE Trigger: CTCTATAGCCACACAGAGCTGGGCTGCCCAGATTCACTTCCATAAGGTAGGCTTGAGGGTTGTGGAGTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGTAGTTACAGCTATCATGTGTTCTGTGTATGCTCCTCCTCCACCTGCCCCCGTTGAAAGGTGGAACTaGCCTCGCAGGCCACCATTT | + |
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Preference number: 3 (lower is better) Translates to: PVVTAIMCSVYAPPPPAPVERWN*PRRPPF Trigger: AAATGGTGGCCTGCGAGGCAAGTTCCACCTTTCAAC...GGGGGCAGGTGGAGGAGGAGCATACACAGAACACATGATAGCTGTAACTACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGTAGTTACAGCTATCATGTGTTCTGTGTATGCTCCTCCTCCACCTGCCCCCTCTCGTTTCCTGTGTTaGGCACTGGGAATGGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: PVVTAIMCSVYAPPPPAPSRFLC*ALGMVK Trigger: TTTCACCATTCCCAGTGCCAAACACAGGAAACGAGA...GGGGGCAGGTGGAGGAGGAGCATACACAGAACACATGATAGCTGTAACTACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR TCA 72 bp | CCCATTCTACCCCCTTTGGTTGTGTCTACTAACAGTTaGAAGGTGGAACTTGCCTCGCAGGCCACCATTTGT | + |
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Preference number: 3 (lower is better) Translates to: PILPPLVVSTNS*KVELASQATIC Trigger: ACAAATGGTGGCCTGCGAGGCAAGTTCCACCTTTCAACTGTTAGTAGACACAACCAAAGGGGGTAGAATGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR CAA 90 bp | GCTTGTAGCCATTTCCATGCCTTGGCTCCACGTTGTCACCCAGAGAGCAGTAAAAATAACACTTCCTGTTaGCTCTCCTCCCATTCTACC | + |
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Preference number: 3 (lower is better) Translates to: ACSHFHALAPRCHPESSKNNTSC*LSSHST Trigger: GGTAGAATGGGAGGAGAGCAAACAGGAAGTGTTATT...TTTACTGCTCTCTGGGTGACAACGTGGAGCCAAGGCATGGAAATGGCTACAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR CCA 72 bp | TACCCCCTTTGGTTGTGTCTACTAACAGTTGAAAGGTaGAACTTGCCTCGCAGGCCACCATTTGTTTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: YPLWLCLLTVER*NLPRRPPFVCV Trigger: AACACAAACAAATGGTGGCCTGCGAGGCAAGTTCCACCTTTCAACTGTTAGTAGACACAACCAAAGGGGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR CCA 72 bp | CACTTCCTGTTTGCTCTCCTCCCATTCTACCCCCTTTaGTTGTGTCTACTAACAGTTGAAAGGTGGAACTTG | + |
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Preference number: 3 (lower is better) Translates to: HFLFALLPFYPL*LCLLTVERWNL Trigger: CAAGTTCCACCTTTCAACTGTTAGTAGACACAACCAAAGGGGGTAGAATGGGAGGAGAGCAAACAGGAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR CCA 72 bp | GTAGTTTTGAAAAATGATGCTAGAGGGTGCAGCAATTaGCACATAGCTGTAATCCCAGTACTTGGGAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: VVLKNDARGCSN*HIAVIPVLGKL Trigger: CAGCTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATCATTTTTCAAAACTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| 3UTR CCA 72 bp | GCAGCCTTAGGAGATTTCAGAAAAGTTACACTAACTTaGCTGTCACTTGATCCTTGGAACCAGCACAGATAT | + |
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Preference number: 3 (lower is better) Translates to: AALGDFRKVTLT*LSLDPWNQHRY Trigger: ATATCTGTGCTGGTTCCAAGGATCAAGTGACAGCCAAGTTAGTGTAACTTTTCTGAAATCTCCTAAGGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR CAA 90 bp | TGTCACTTGATCCTTGGAACCAGCACAGATATTATGAATTCTGCTTTGCATTTACTCGCAGGCCACCATTaGTTTGTGTTTCTTCAGATT | + |
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Preference number: 3 (lower is better) Translates to: CHLILGTSTDIMNSALHLLAGHH*FVFLQI Trigger: AATCTGAAGAAACACAAACAAATGGTGGCCTGCGAG...TAAATGCAAAGCAGAATTCATAATATCTGTGCTGGTTCCAAGGATCAAGTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR TCA 72 bp | GTTAATTCTACCTTTTGGGTTGAACTTGAAAGTCCTTaGACTGCAAAAACTCTAGGAAGTTGGATGGTTGTA | + |
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Preference number: 3 (lower is better) Translates to: VNSTFWVELESP*TAKTLGSWMVV Trigger: TACAACCATCCAACTTCCTAGAGTTTTTGCAGTTCAAGGACTTTCAAGTTCAACCCAAAAGGTAGAATTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR-3UTR CAA 90 bp | AACAACCTTGACATCATAGTCCAGAAAATGCCAAATTTCTCAAAGTTGACAACACAGGCCACCATTTGTTaGTGTTTCTTCAGATTTTTC | + |
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Preference number: 3 (lower is better) Translates to: NNLDIIVQKMPNFSKLTTQATIC*CFFRFF Trigger: GAAAAATCTGAAGAAACACAAACAAATGGTGGCCTG...TGTTGTCAACTTTGAGAAATTTGGCATTTTCTGGACTATGATGTCAAGGTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR TCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGGGGTGTTTGGGTTTCTaGTCCTTGGGAAATACTCTG | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKGCLGF*SLGNTL Trigger: CAGAGTATTTCCCAAGGATCAGAAACCCAAACACCC...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | GCTTGTAGCCATTTCCATGCCTTGGCTCCACGTTGTCACCCAGAGAGCAGTAAAGCAACGGAAAATTATTaGTACCGGACATGGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: ACSHFHALAPRCHPESSKATENY*YRTWQQ Trigger: TTGCTGCCATGTCCGGTACCAATAATTTTCCGTTGC...TTTACTGCTCTCTGGGTGACAACGTGGAGCCAAGGCATGGAAATGGCTACAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR TCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGACAACTCTGCAGTTTTaGAAGGGCCGAGCTGAAATA | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKTTLQF*KGRAEI Trigger: TATTTCAGCTCGGCCCTTTCAAAACTGCAGAGTTGT...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR TCA 90 bp | GCTTGTAGCCATTTCCATGCCTTGGCTCCACGTTGTCACCCAGAGAGCAGTAAAATAGTGACTGGAGTCTaGAAAGACAGACTCTGGATA | + |
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Preference number: 4 (lower is better) Translates to: ACSHFHALAPRCHPESSKIVTGV*KDRLWI Trigger: TATCCAGAGTCTGTCTTTTCAGACTCCAGTCACTAT...TTTACTGCTCTCTGGGTGACAACGTGGAGCCAAGGCATGGAAATGGCTACAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR TCA 90 bp | GCTTGTAGCCATTTCCATGCCTTGGCTCCACGTTGTCACCCAGAGAGCAGTAAATCTGCAGTCAGATTGTaGTATGCATTCTGCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: ACSHFHALAPRCHPESSKSAVRL*YAFCFI Trigger: GATGAAGCAGAATGCATATCACAATCTGACTGCAGA...TTTACTGCTCTCTGGGTGACAACGTGGAGCCAAGGCATGGAAATGGCTACAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR GCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGAAGAGATCACAACTCTaGAGTTTTGAAAGGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKKRSQL*SFERAE Trigger: CTCGGCCCTTTCAAAACTGCAGAGTTGTGATCTCTT...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGGCAACGGAAAATTATTaGTACCGGACATGGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKATENY*YRTWQQ Trigger: TTGCTGCCATGTCCGGTACCAATAATTTTCCGTTGC...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGTGGGGTCATAGTGACTaGAGTCTGAAAAGACAGACT | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKWGHSD*SLKRQT Trigger: AGTCTGTCTTTTCAGACTCCAGTCACTATGACCCCA...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGGCTTCATCAAAGACATaGTGGCATTCCCGTAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKASSKT*WHSRSS Trigger: ACTACTACGGGAATGCCACCATGTCTTTGATGAAGC...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR TCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGATAGTGACTGGAGTCTaGAAAGACAGACTCTGGATA | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKIVTGV*KDRLWI Trigger: TATCCAGAGTCTGTCTTTTCAGACTCCAGTCACTAT...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR TCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGTCTGCAGTCAGATTGTaGTATGCATTCTGCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKSAVRL*YAFCFI Trigger: GATGAAGCAGAATGCATATCACAATCTGACTGCAGA...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGCCTCATTTCTTCAGCTaGGAACCAATAGCCATTTGT | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKPHFFS*EPIAIC Trigger: ACAAATGGCTATTGGTTCCCAGCTGAAGAAATGAGG...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGAGCTCTGCACAGAAATaGGTAAAGCTGAGGAAATCT | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKSSAQK*VKLRKS Trigger: AGATTTCCTCAGCTTTACCCATTTCTGTGCAGAGCT...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGTGGGTTTCTGATCCTTaGGAAATACTCTGGGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKWVSDP*EILWEN Trigger: GTTTTCCCAGAGTATTTCCCAAGGATCAGAAACCCA...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGTCATCAAAGACATGGTaGCATTCCCGTAGTAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKSSKTW*HSRSSV Trigger: TACACTACTACGGGAATGCCACCATGTCTTTGATGA...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | CAGTTGAAAGGTGGAACTTGCCTCGCAGGCCACCATTTGTTTGTGTTTCTTCAGGCTTCATCAAAGACATaGTGGCATTCCCGTAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: QLKGGTCLAGHHLFVFLQASSKT*WHSRSS Trigger: ACTACTACGGGAATGCCACCATGTCTTTGATGAAGC...CTGAAGAAACACAAACAAATGGTGGCCTGCGAGGCAAGTTCCACCTTTCAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR CAA 72 bp | TTCCTGTTTGCTCTCCTCCCATTCTACCCCCTTTGGTaGTGTCTACTAACAGTTGAAAGGTGGAACTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: FLFALLPFYPLW*CLLTVERWNLP Trigger: AGGCAAGTTCCACCTTTCAACTGTTAGTAGACACAACCAAAGGGGGTAGAATGGGAGGAGAGCAAACAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR TCA 90 bp | TCACCAGCGTTTCCAATAATAACACTTCCTGTTTGCTCTCCTCCCATTCTACCCACAACTCTGCAGTTTTaGAAGGGCCGAGCTGAAATA | + |
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Preference number: 4 (lower is better) Translates to: SPAFPIITLPVCSPPILPTTLQF*KGRAEI Trigger: TATTTCAGCTCGGCCCTTTCAAAACTGCAGAGTTGT...GGGTAGAATGGGAGGAGAGCAAACAGGAAGTGTTATTATTGGAAACGCTGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGCATAATAGAGGAAGATaGAACTCAGGAATATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKHNRGR*NSGIWP Trigger: TGGCCATATTCCTGAGTTCCATCTTCCTCTATTATG...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGCCTTGGGAAATACTCTaGGAAAACGAAGCATTTGAA | + |
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Preference number: 4 (lower is better) Translates to: DARGCSNWHIAVIPVLGKPWEIL*ENEAFE Trigger: TTCAAATGCTTCGTTTTCCCAGAGTATTTCCCAAGG...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | CAGTTGAAAGGTGGAACTTGCCTCGCAGGCCACCATTTGTTTGTGTTTCTTCAGTGGGTTTCTGATCCTTaGGAAATACTCTGGGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: QLKGGTCLAGHHLFVFLQWVSDP*EILWEN Trigger: GTTTTCCCAGAGTATTTCCCAAGGATCAGAAACCCA...CTGAAGAAACACAAACAAATGGTGGCCTGCGAGGCAAGTTCCACCTTTCAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | GAAAGGTGGAACTTGCCTCGCAGGCCACCATTTGTTTGTGTTTCTTCAGATTTTTGGGGTCATAGTGACTaGAGTCTGAAAAGACAGACT | + |
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Preference number: 4 (lower is better) Translates to: ERWNLPRRPPFVCVSSDFWGHSD*SLKRQT Trigger: AGTCTGTCTTTTCAGACTCCAGTCACTATGACCCCA...AAAATCTGAAGAAACACAAACAAATGGTGGCCTGCGAGGCAAGTTCCACCTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | TCACCAGCGTTTCCAATAATAACACTTCCTGTTTGCTCTCCTCCCATTCTACCCTCATCAAAGACATGGTaGCATTCCCGTAGTAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: SPAFPIITLPVCSPPILPSSKTW*HSRSSV Trigger: TACACTACTACGGGAATGCCACCATGTCTTTGATGA...GGGTAGAATGGGAGGAGAGCAAACAGGAAGTGTTATTATTGGAAACGCTGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR CAA 72 bp | CTTTGGTTGTGTCTACTAACAGTTGAAAGGTGGAACTaGCCTCGCAGGCCACCATTTGTTTGTGTTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LWLCLLTVERWN*PRRPPFVCVSS Trigger: TGAAGAAACACAAACAAATGGTGGCCTGCGAGGCAAGTTCCACCTTTCAACTGTTAGTAGACACAACCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR CAA 72 bp | ATTATCACCAGCGTTTCCAATAATAACACTTCCTGTTaGCTCTCCTCCCATTCTACCCCCTTTGGTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: IITSVSNNNTSC*LSSHSTPFGCV Trigger: GACACAACCAAAGGGGGTAGAATGGGAGGAGAGCAAACAGGAAGTGTTATTATTGGAAACGCTGGTGATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR CAA 72 bp | AGCAGAACTAACGGGGCTCCGCTGTATGGAAAGGAGTaGTTAATTCTACCTTTTGGGTTGAACTTGAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SRTNGAPLYGKE*LILPFGLNLKV Trigger: GACTTTCAAGTTCAACCCAAAAGGTAGAATTAACAACTCCTTTCCATACAGCGGAGCCCCGTTAGTTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | GAAAGGTGGAACTTGCCTCGCAGGCCACCATTTGTTTGTGTTTCTTCAGATTTTCCTCATTTCTTCAGCTaGGAACCAATAGCCATTTGT | + |
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Preference number: 4 (lower is better) Translates to: ERWNLPRRPPFVCVSSDFPHFFS*EPIAIC Trigger: ACAAATGGCTATTGGTTCCCAGCTGAAGAAATGAGG...AAAATCTGAAGAAACACAAACAAATGGTGGCCTGCGAGGCAAGTTCCACCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| 3UTR CAA 72 bp | TCACTATTTGCACTTTCCACTGAACAGTGGGTTGATTaGCTGTTCACACACAGAATTTATCCAGTAGTTACA | + |
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Preference number: 4 (lower is better) Translates to: SLFALSTEQWVD*LFTHRIYPVVT Trigger: TGTAACTACTGGATAAATTCTGTGTGTGAACAGCAAATCAACCCACTGTTCAGTGGAAAGTGCAAATAGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | GATATTCAATACTTAAGTCACTGTGGCTTAGTGGGTTTCTCTTTTCCTGATAGTCCTTGGGAAATACTCTaGGAAAACGAAGCATTTGAA | + |
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Preference number: 4 (lower is better) Translates to: DIQYLSHCGLVGFSFPDSPWEIL*ENEAFE Trigger: TTCAAATGCTTCGTTTTCCCAGAGTATTTCCCAAGG...ACTATCAGGAAAAGAGAAACCCACTAAGCCACAGTGACTTAAGTATTGAATATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR CCA 90 bp | AACAACCTTGACATCATAGTCCAGAAAATGCCAAATTTCTCAAAGTTGACAACACATAATAGAGGAAGATaGAACTCAGGAATATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: NNLDIIVQKMPNFSKLTTHNRGR*NSGIWP Trigger: TGGCCATATTCCTGAGTTCCATCTTCCTCTATTATG...TGTTGTCAACTTTGAGAAATTTGGCATTTTCTGGACTATGATGTCAAGGTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR CAA 90 bp | CCCTCAAGCCTACCTTATGGAAGTGAATCTGGGCAGCCCAGCTCTGTGTGGCTAGGAACCAATAGCCATTaGTTCCCCACAGTATACAGT | + |
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Preference number: 5 (lower is better) Translates to: PSSLPYGSESGQPSSVWLGTNSH*FPTVYS Trigger: ACTGTATACTGTGGGGAACAAATGGCTATTGGTTCC...TAGCCACACAGAGCTGGGCTGCCCAGATTCACTTCCATAAGGTAGGCTTGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR CAA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGGGGAAAACGAAGCATTaGAAAAGCTGCTTCGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: DARGCSNWHIAVIPVLGKGKTKH*KSCFAG Trigger: ACCAGCGAAGCAGCTTTTCAAATGCTTCGTTTTCCC...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CAA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGGGAACCAATAGCCATTaGTTCCCCACAGTATACAGT | + |
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Preference number: 5 (lower is better) Translates to: DARGCSNWHIAVIPVLGKGTNSH*FPTVYS Trigger: ACTGTATACTGTGGGGAACAAATGGCTATTGGTTCC...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CAA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGGGAAATCTCAGAAGATaGGCGAAAGCTGGCTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: DARGCSNWHIAVIPVLGKGNLRR*AKAGFL Trigger: TAAAAAGCCAGCTTTCGCCAATCTTCTGAGATTTCC...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS CCA 90 bp | CTGCAGTCAGATTGTGATATGCATTCTGCTTCATCAAAGACATGGTaGCATTCCCGTAGTAGTGTAAAGGACTGTTGGGGCTGTAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: LQSDCDMHSASSKTW*HSRSSVKDCWGCKS Trigger: ACTTTTACAGCCCCAACAGTCCTTTACACTACTACGGGAATGCCACCATGTCTTTGATGAAGCAGAATGCATATCACAATCTGACTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CAA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGCATAGGAGTCAATTGTaGCTCCTAATGTCTTATTCT | + |
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Preference number: 5 (lower is better) Translates to: DARGCSNWHIAVIPVLGKHRSQL*LLMSYS Trigger: AGAATAAGACATTAGGAGCAACAATTGACTCCTATG...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CAA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGCATCATAGGAGTCAATaGTTGCTCCTAATGTCTTAT | + |
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Preference number: 5 (lower is better) Translates to: DARGCSNWHIAVIPVLGKHHRSQ*LLLMSY Trigger: ATAAGACATTAGGAGCAACAATTGACTCCTATGATG...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CAA 90 bp | GATGCTAGAGGGTGCAGCAATTGGCACATAGCTGTAATCCCAGTACTTGGGAAGCCTAAGACAGGACCGTaGTTCATTCTTATTATTACA | + |
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Preference number: 5 (lower is better) Translates to: DARGCSNWHIAVIPVLGKPKTGP*FILIIT Trigger: TGTAATAATAAGAATGAACAACGGTCCTGTCTTAGG...CTTCCCAAGTACTGGGATTACAGCTATGTGCCAATTGCTGCACCCTCTAGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS TCA 90 bp | ACTCGTCAAAGAGATCACAACTCTGCAGTTTTGAAAGGGCCGAGCTaGAATATGTCTCGAAGGTCTTTATTCCATAGGGCAACGGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: TRQRDHNSAVLKGPS*NMSRRSLFHRATEN Trigger: ATTTTCCGTTGCCCTATGGAATAAAGACCTTCGAGACATATTTCAGCTCGGCCCTTTCAAAACTGCAGAGTTGTGATCTCTTTGACGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS TCA 90 bp | TGGCACTCTGTCAAACTCGTCAAAGAGATCACAACTCTGCAGTTTTaGAAGGGCCGAGCTGAAATATGTCTCGAAGGTCTTTATTCCATA | + |
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Preference number: 5 (lower is better) Translates to: WHSVKLVKEITTLQF*KGRAEICLEGLYSI Trigger: TATGGAATAAAGACCTTCGAGACATATTTCAGCTCGGCCCTTTCAAAACTGCAGAGTTGTGATCTCTTTGACGAGTTTGACAGAGTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS GCA 90 bp | CTTTTACATGGCACTCTGTCAAACTCGTCAAAGAGATCACAACTCTaGAGTTTTGAAAGGGCCGAGCTGAAATATGTCTCGAAGGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: LLHGTLSNSSKRSQL*SFERAELKYVSKVF Trigger: AAAGACCTTCGAGACATATTTCAGCTCGGCCCTTTCAAAACTGCAGAGTTGTGATCTCTTTGACGAGTTTGACAGAGTGCCATGTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS-3UTR CAA 90 bp | TCACCAGCGTTTCCAATAATAACACTTCCTGTTTGCTCTCCTCCCATTCTACCCCCTAAGACAGGACCGTaGTTCATTCTTATTATTACA | + |
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Preference number: 5 (lower is better) Translates to: SPAFPIITLPVCSPPILPPKTGP*FILIIT Trigger: TGTAATAATAAGAATGAACAACGGTCCTGTCTTAGG...GGGTAGAATGGGAGGAGAGCAAACAGGAAGTGTTATTATTGGAAACGCTGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR CAA 90 bp | GATATTCAATACTTAAGTCACTGTGGCTTAGTGGGTTTCTCTTTTCCTGATAGTGGAAATCTCAGAAGATaGGCGAAAGCTGGCTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: DIQYLSHCGLVGFSFPDSGNLRR*AKAGFL Trigger: TAAAAAGCCAGCTTTCGCCAATCTTCTGAGATTTCC...ACTATCAGGAAAAGAGAAACCCACTAAGCCACAGTGACTTAAGTATTGAATATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS-3UTR CAA 90 bp | TGTCACTTGATCCTTGGAACCAGCACAGATATTATGAATTCTGCTTTGCATTTACATCATAGGAGTCAATaGTTGCTCCTAATGTCTTAT | + |
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Preference number: 5 (lower is better) Translates to: CHLILGTSTDIMNSALHLHHRSQ*LLLMSY Trigger: ATAAGACATTAGGAGCAACAATTGACTCCTATGATG...TAAATGCAAAGCAGAATTCATAATATCTGTGCTGGTTCCAAGGATCAAGTGACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137035.8 |
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| CDS GCA 72 bp | GGCACTCTGTCAAACTCGTCAAAGAGATCACAACTCTaGAGTTTTGAAAGGGCCGAGCTGAAATATGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: GTLSNSSKRSQL*SFERAELKYVS Trigger: CGAGACATATTTCAGCTCGGCCCTTTCAAAACTGCAGAGTTGTGATCTCTTTGACGAGTTTGACAGAGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS CCA 72 bp | GATTGTGATATGCATTCTGCTTCATCAAAGACATGGTaGCATTCCCGTAGTAGTGTAAAGGACTGTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: DCDMHSASSKTW*HSRSSVKDCWG Trigger: GCCCCAACAGTCCTTTACACTACTACGGGAATGCCACCATGTCTTTGATGAAGCAGAATGCATATCACAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS TCA 72 bp | AGAGATCACAACTCTGCAGTTTTGAAAGGGCCGAGCTaGAATATGTCTCGAAGGTCTTTATTCCATAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RDHNSAVLKGPS*NMSRRSLFHRA Trigger: TGCCCTATGGAATAAAGACCTTCGAGACATATTTCAGCTCGGCCCTTTCAAAACTGCAGAGTTGTGATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS TCA 72 bp | GTCAAACTCGTCAAAGAGATCACAACTCTGCAGTTTTaGAAGGGCCGAGCTGAAATATGTCTCGAAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: VKLVKEITTLQF*KGRAEICLEGL Trigger: AAGACCTTCGAGACATATTTCAGCTCGGCCCTTTCAAAACTGCAGAGTTGTGATCTCTTTGACGAGTTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS CCA 72 bp | GGCAGCAACCTTTATAAAGTCAGCTCTGCACAGAAATaGGTAAAGCTGAGGAAATCTCAGAAGATTGGCGAA | + |
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Preference number: 6 (lower is better) Translates to: GSNLYKVSSAQK*VKLRKSQKIGE Trigger: TTCGCCAATCTTCTGAGATTTCCTCAGCTTTACCCATTTCTGTGCAGAGCTGACTTTATAAAGGTTGCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS TCA 72 bp | TACTTAAAACCAGCGAGGTGCACTTCACTGCATATGTaGAAGGCCATTGTGATGGCAATAATTCCTGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: YLKPARCTSLHM*KAIVMAIIPVV Trigger: TACAACAGGAATTATTGCCATCACAATGGCCTTTCACATATGCAGTGAAGTGCACCTCGCTGGTTTTAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS CCA 72 bp | ATTATTGACATTGTTTCTAGTCCTCATTTCTTCAGCTaGGAACCAATAGCCATTTGTTCCCCACAGTATACA | + |
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Preference number: 6 (lower is better) Translates to: IIDIVSSPHFFS*EPIAICSPQYT Trigger: TGTATACTGTGGGGAACAAATGGCTATTGGTTCCCAGCTGAAGAAATGAGGACTAGAAACAATGTCAATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000126978.8 ENSMUST00000137035.8 ENSMUST00000149456.8 |
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| CDS CAA 90 bp | CAGGACCGTTGTTCATTCTTATTATTACATCATAGGAGTCAATTGTaGCTCCTAATGTCTTATTCTTCAACACTCCTCCATTACCAACCA | + |
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Preference number: 6 (lower is better) Translates to: QDRCSFLLLHHRSQL*LLMSYSSTLLHYQP Trigger: TGGTTGGTAATGGAGGAGTGTTGAAGAATAAGACATTAGGAGCAACAATTGACTCCTATGATGTAATAATAAGAATGAACAACGGTCCTG 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS CAA 90 bp | AGACAGGACCGTTGTTCATTCTTATTATTACATCATAGGAGTCAATaGTTGCTCCTAATGTCTTATTCTTCAACACTCCTCCATTACCAA | + |
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Preference number: 6 (lower is better) Translates to: RQDRCSFLLLHHRSQ*LLLMSYSSTLLHYQ Trigger: TTGGTAATGGAGGAGTGTTGAAGAATAAGACATTAGGAGCAACAATTGACTCCTATGATGTAATAATAAGAATGAACAACGGTCCTGTCT 37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000137035.8 |
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| CDS CAA 72 bp | CGTTGTTCATTCTTATTATTACATCATAGGAGTCAATaGTTGCTCCTAATGTCTTATTCTTCAACACTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RCSFLLLHHRSQ*LLLMSYSSTLL Trigger: GAGGAGTGTTGAAGAATAAGACATTAGGAGCAACAATTGACTCCTATGATGTAATAATAAGAATGAACAACG 35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114357.10 ENSMUST00000114358.9 ENSMUST00000137035.8 |
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