Pregenerated sensors for ST3GAL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056091Ensembl transcript IDs: ENSMUST00000069994.11, ENSMUST00000114112.4, ENSMUST00000187007.3, ENSMUST00000188366.3
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGTGTGGCTTCTTCCACCCTGGGGCAACATCACGGCGCTCAGCTaGCAGTGGCTCACCAACCAGCAGCCTCCGGGACAGCTGCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: EVWLLPPWGNITALS*QWLTNQQPPGQLPC Trigger: GCAGGGCAGCTGTCCCGGAGGCTGCTGGTTGGTGAGCCACTGTCAGCTGAGCGCCGTGATGTTGCCCCAGGGTGGAAGAAGCCACACTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCAGGAAGTTTCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGAAGCAGCTGCAGGGTaGAGTCCCTGTGGAGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: GGRKFLCHQFYQTEQQTPEAAAG*SPCGGC Trigger: GCAGCCTCCACAGGGACTTCACCCTGCAGCTGCTTC...TGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGAAACTTCCTGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACACACACACACCCCTCCAGAAGTTTTGGCTTCTTCCACCCTaGGGCAACATCACGGCGCTC | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTHTPLQKFWLLPP*GNITAL Trigger: GAGCGCCGTGATGTTGCCCCAGGGTGGAAGAAGCCA...AAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR GCA 90 bp | AACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGGCCAGATTTGAAAACACTAGCTaGACATCGAAGCAGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: NRAADPSIGHHSHHPGARFENTS*TSKQLQ Trigger: CTGCAGCTGCTTCGATGTGCAGCTAGTGTTTTCAAA...TCTGGCCCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACACACACCCCTCCAGAAGTTTTCCCACCTCAACACCTaGGCAGAGTACGTGTGTACA | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTHTPLQKFSHLNT*AEYVCT Trigger: TGTACACACGTACTCTGCTCAGGTGTTGAGGTGGGA...AAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR GCA 90 bp | TCCCATGGCCTGGATAACAAAGGCTTTGTCATAATTTCTATGAACCATCTCATAGCCCTGCCTGAGTCCTaGGAGCCAGCTGGCAGATGG | + |
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Preference number: 2 (lower is better) Translates to: SHGLDNKGFVIISMNHLIALPES*EPAGRW Trigger: CCATCTGCCAGCTGGCTCGCAGGACTCAGGCAGGGC...TATGAGATGGTTCATAGAAATTATGACAAAGCCTTTGTTATCCAGGCCATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACACACACACACACCCCTCCAGAAGTTTTGAAAACACTAGCTaGACATCGAAGCAGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTHTHPSRSFENTS*TSKQLQ Trigger: CTGCAGCTGCTTCGATGTGCAGCTAGTGTTTTCAAA...ACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR GCA 90 bp | TTTCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCAATAGGACGAAGAGGTaGACAGAGCAGAGCTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: FLCHQFYQTEQQTPVSGINRTKR*TEQSFC Trigger: ACAAAAGCTCTGCTCTGTGCACCTCTTCGTCCTATT...GATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR CCA 90 bp | CACACACACACACACACACACACACCCCTCCAGAAGTTTAAAAGTGCCCTGACAGTAAGCCCTTTATCCTaGAGGCAGGAAGTTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTPLQKFKSALTVSPLS*RQEVSL Trigger: CAGAGAAACTTCCTGCCTCCAGGATAAAGGGCTTAC...TGTCAGGGCACTTTTAAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR GCA 90 bp | GAGGTGATGAGTAAGCCCTTTATCCTGGAGGCAGGAAGTTTCTCTGCCATCAGTAATAGGACGAAGAGGTaGACAGAGCAGAGCTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: EVMSKPFILEAGSFSAISNRTKR*TEQSFC Trigger: ACAAAAGCTCTGCTCTGTGCACCTCTTCGTCCTATT...ACTGATGGCAGAGAAACTTCCTGCCTCCAGGATAAAGGGCTTACTCATCACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR GCA 90 bp | CACACACACACACACACACACACACCCCTCCAGAAGTTTAAAAGTGCCCTGACAGGCAGGAAGTTTCTCTaGCATCAGTTCTACCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: HTHTHTHTPLQKFKSALTGRKFL*HQFYQT Trigger: TGTTTGGTAGAACTGATGGCAGAGAAACTTCCTGCC...TGTCAGGGCACTTTTAAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCAGGAAGTTTCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCATGCAAAATCCAACACTaGCTTCAAATAAATAGGACG | + |
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Preference number: 2 (lower is better) Translates to: GGRKFLCHQFYQTEQQTPCKIQH*LQINRT Trigger: CGTCCTATTTATTTGAAGTCAGTGTTGGATTTTGCA...TGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGAAACTTCCTGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR CCA 90 bp | TCCCATGGCCTGGATAACAAAGGCTTTGTCATAATTTCTATGAACCATCTCATATCTCAGCTGCGGTGCTaGGTGAGGTTTGCCGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: SHGLDNKGFVIISMNHLISQLRC*VRFAVF Trigger: GAACACGGCAAACCTCACCCAGCACCGCAGCTGAGA...TATGAGATGGTTCATAGAAATTATGACAAAGCCTTTGTTATCCAGGCCATGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCTGCAAAATCCAACACTaGCTTCAAATAAATAGGACG | + |
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Preference number: 2 (lower is better) Translates to: FLCHQFYQTEQQTPVSGICKIQH*LQINRT Trigger: CGTCCTATTTATTTGAAGTCAGTGTTGGATTTTGCA...GATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGGATAACAAAGGCTTTGTCATAATTTCTATGAACCATCTCATACAAACATCTCAGCTGCGGTGCTaGGTGAGGTTTGCCGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: GLDNKGFVIISMNHLIQTSQLRC*VRFAVF Trigger: GAACACGGCAAACCTCACCCAGCACCGCAGCTGAGA...TGTTTGTATGAGATGGTTCATAGAAATTATGACAAAGCCTTTGTTATCCAGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR GCA 72 bp | TGGCTCACCAACCAGCAGCCTCCGGGACAGCTGCCCTaGCTGAGTCCTGCGAGCCAGCTGGCAGATGGACTA | + |
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Preference number: 3 (lower is better) Translates to: WLTNQQPPGQLP*LSPASQLADGL Trigger: TAGTCCATCTGCCAGCTGGCTCGCAGGACTCAGGCAGGGCAGCTGTCCCGGAGGCTGCTGGTTGGTGAGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR CCA 72 bp | GCTGCACATCGAAGCAGCTGCAGGGTGAAGTCCCTGTaGAGGCTGCTCACCACGCTCTCAGCTGCGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: AAHRSSCRVKSL*RLLTTLSAAVL Trigger: CAGCACCGCAGCTGAGAGCGTGGTGAGCAGCCTCCACAGGGACTTCACCCTGCAGCTGCTTCGATGTGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| 3UTR GCA 72 bp | TGGAGTTTGAAAACACTAGCTGCACATCGAAGCAGCTaGAGGGTGAAGTCCCTGTGGAGGCTGCTCACCACG | + |
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Preference number: 3 (lower is better) Translates to: WSLKTLAAHRSS*RVKSLWRLLTT Trigger: CGTGGTGAGCAGCCTCCACAGGGACTTCACCCTGCAGCTGCTTCGATGTGCAGCTAGTGTTTTCAAACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR TCA 90 bp | GTGAAGTCCCTGTGGAGGCTGCTCACCACGCTCTCAGCTGCGGTGCTGGGTGAGTCAGCTTTGCAGAGGTaGACTCACTTGGCATTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VKSLWRLLTTLSAAVLGESALQR*THLALL Trigger: GAGCAATGCCAAGTGAGTTCACCTCTGCAAAGCTGA...CTCACCCAGCACCGCAGCTGAGAGCGTGGTGAGCAGCCTCCACAGGGACTTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069994.11 |
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| CDS-3UTR TCA 90 bp | AACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGGCCAGACCAAGACAACGGCAATaGCGCCGATCGTGGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: NRAADPSIGHHSHHPGARPRQRQ*RRSWGC Trigger: ACATCCCCACGATCGGCGTCATTGCCGTTGTCTTGG...TCTGGCCCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR CCA 90 bp | GTGAAGTCCCTGTGGAGGCTGCTCACCACGCTCTCAGCTGCGGTGCTGGGTGAGCTTCTCATCTTGTGCTaGGTTCGGGTGTACCATTGC | + |
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Preference number: 4 (lower is better) Translates to: VKSLWRLLTTLSAAVLGELLILC*VRVYHC Trigger: GCAATGGTACACCCGAACCCAGCACAAGATGAGAAG...CTCACCCAGCACCGCAGCTGAGAGCGTGGTGAGCAGCCTCCACAGGGACTTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR TCA 90 bp | AGAAGCCCCTCTCCTCCCACCTCAACACCTGAGCAGAGTACGTGTGTACAGTTTCCACCACGCCCTCCTTaGGGAGCTTCAGGAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: RSPSPPTSTPEQSTCVQFPPRPP*GASGGT Trigger: AGTTCCTCCTGAAGCTCCTCAAGGAGGGCGTGGTGG...AAACTGTACACACGTACTCTGCTCAGGTGTTGAGGTGGGAGGAGAGGGGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR GCA 90 bp | CTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGACATTGTGCATGACCTaGCAGTGCATGGCGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: LPNRAADPSIGHHSHHPGTLCMT*QCMAPM Trigger: CATGGGCGCCATGCACTGGCAGGTCATGCACAATGT...CCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR TCA 90 bp | TCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACAGAAGGCGGGTCATACTTaGGCTCAGCTTCACTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SAISSTKQSSRPQYRASQKAGHT*AQLHWP Trigger: CGGCCAGTGAAGCTGAGCTCAAGTATGACCCGCCTT...CTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR GCA 90 bp | CTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGGTTCGGGTGTACCATTaGAGGGAGGTCCTTGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: LPNRAADPSIGHHSHHPGVRVYH*REVLEQ Trigger: TTGCTCAAGGACCTCCCTGCAATGGTACACCCGAAC...CCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR GCA 90 bp | CTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGGTCGTAGCCAAAGCCTaGCAGGCTGACTTCATCACA | + |
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Preference number: 4 (lower is better) Translates to: LPNRAADPSIGHHSHHPGVVAKA*QADFIT Trigger: TGTGATGAAGTCAGCCTGGCAGGCTTTGGCTACGAC...CCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR CCA 90 bp | TCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACCCGTCTTCGCGTACCTaGGCCGACATTCCTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SLPSVLPNRAADPSIGHHPSSRT*ADIPSA Trigger: TGCAGAAGGAATGTCGGCCCAGGTACGCGAAGACGG...GTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR CCA 90 bp | GTGAAGTCCCTGTGGAGGCTGCTCACCACGCTCTCAGCTGCGGTGCTGGGTGAGATATCCAAGAGGCTCTaGACTTTACTGGAGAACTTC | + |
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Preference number: 4 (lower is better) Translates to: VKSLWRLLTTLSAAVLGEISKRL*TLLENF Trigger: GAAGTTCTCCAGTAAAGTCCAGAGCCTCTTGGATAT...CTCACCCAGCACCGCAGCTGAGAGCGTGGTGAGCAGCCTCCACAGGGACTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR CCA 90 bp | AACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGGCCAGACAGTGGCGCACCCTCTaGGTAAGTCATCCTTATAGT | + |
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Preference number: 4 (lower is better) Translates to: NRAADPSIGHHSHHPGARQWRTL*VSHPYS Trigger: ACTATAAGGATGACTTACCCAGAGGGTGCGCCACTG...TCTGGCCCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR TCA 90 bp | CTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGTTGCAGGGAGGTCCTTaGGCAATCACTTCTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LPNRAADPSIGHHSHHPGLQGGP*AITSQL Trigger: AAGCTGAGAAGTGATTGCTCAAGGACCTCCCTGCAA...CCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR GCA 90 bp | TCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACCAACCACACAGCGCTTaGAGGCCTTGGCTCTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SLPSVLPNRAADPSIGHHQPHSA*RPWLSS Trigger: ACTTGAGAGCCAAGGCCTGCAAGCGCTGTGTGGTTG...GTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR GCA 90 bp | TCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACAGACATTGTGCATGACCTaGCAGTGCATGGCGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: SAISSTKQSSRPQYRASQTLCMT*QCMAPM Trigger: CATGGGCGCCATGCACTGGCAGGTCATGCACAATGT...CTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR CCA 90 bp | AGAAGCCCCTCTCCTCCCACCTCAACACCTGAGCAGAGTACGTGTGTACAGTTTCAGCTTCACTGGCCGTaGGGACCTTCTGCACAAAAG | + |
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Preference number: 4 (lower is better) Translates to: RSPSPPTSTPEQSTCVQFQLHWP*GPSAQK Trigger: CTTTTGTGCAGAAGGTCCCCACGGCCAGTGAAGCTG...AAACTGTACACACGTACTCTGCTCAGGTGTTGAGGTGGGAGGAGAGGGGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR CCA 90 bp | AACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGGCCAGAGCTTCAGGAGGAACTTaGTCTCTGTGGTCACATTGT | + |
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Preference number: 4 (lower is better) Translates to: NRAADPSIGHHSHHPGARASGGT*SLWSHC Trigger: ACAATGTGACCACAGAGACCAAGTTCCTCCTGAAGC...TCTGGCCCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR TCA 90 bp | AACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGGCCAGACGGTGTAATTCAAAATaGGGATGTACAGGAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: NRAADPSIGHHSHHPGARRCNSK*GCTGAR Trigger: TCTGGCTCCTGTACATCCTCATTTTGAATTACACCG...TCTGGCCCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR TCA 90 bp | GCCCTTTATCCTGGAGGCAGGAAGTTTCTCTGCCATCAGTTCTACCAAACAGAGCCACATCGAACTGGTTaGGGGCGTGACCCAGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: ALYPGGRKFLCHQFYQTEPHRTG*GRDPAL Trigger: TAGAGCTGGGTCACGCCCTCAACCAGTTCGATGTGG...CTCTGTTTGGTAGAACTGATGGCAGAGAAACTTCCTGCCTCCAGGATAAAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR TCA 90 bp | GCCCTTTATCCTGGAGGCAGGAAGTTTCTCTGCCATCAGTTCTACCAAACAGAGCCAAGACAACGGCAATaGCGCCGATCGTGGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: ALYPGGRKFLCHQFYQTEPRQRQ*RRSWGC Trigger: ACATCCCCACGATCGGCGTCATTGCCGTTGTCTTGG...CTCTGTTTGGTAGAACTGATGGCAGAGAAACTTCCTGCCTCCAGGATAAAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR CCA 90 bp | TCCCATGGCCTGGATAACAAAGGCTTTGTCATAATTTCTATGAACCATCTCATATGGCTTCGCAGCTTCTaGGGCCTCCGCGCCGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: SHGLDNKGFVIISMNHLIWLRSF*GLRAAP Trigger: CGGCGCGGCGCGGAGGCCCCAGAAGCTGCGAAGCCA...TATGAGATGGTTCATAGAAATTATGACAAAGCCTTTGTTATCCAGGCCATGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069994.11 |
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| CDS-3UTR GCA 90 bp | CTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGATCACTTCTCAGCTTTaGAGAGGTGAACTCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: LPNRAADPSIGHHSHHPGITSQL*RGELTW Trigger: CCAAGTGAGTTCACCTCTGCAAAGCTGAGAAGTGAT...CCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGGAAGTTTCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGGTCTTCTCATCTTGTaGTGGGTTCGGGTGTACCAT | + |
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Preference number: 4 (lower is better) Translates to: GGRKFLCHQFYQTEQQTPGLLIL*WVRVYH Trigger: ATGGTACACCCGAACCCAGCACAAGATGAGAAGACC...TGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGAAACTTCCTGCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACACACACACACCCCTCCAGAAGTTTGCCGTGGGGACCTTCTaGACAAAAGGCTCCAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTPLQKFAVGTF*TKGSKL Trigger: CAACTTGGAGCCTTTTGTGCAGAAGGTCCCCACGGC...AAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACCCCTCCAGAAGTTTAAAAGTGCCCTGACAGCCGTGGGGACCTTCTaGACAAAAGGCTCCAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: HTHTHTHTPLQKFKSALTAVGTF*TKGSKL Trigger: CAACTTGGAGCCTTTTGTGCAGAAGGTCCCCACGGC...TGTCAGGGCACTTTTAAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR GCA 90 bp | AACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGGCCAGAACTTTTTCTGCCACTTaGTTCCAAAAGAAGAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: NRAADPSIGHHSHHPGARTFSAT*FQKKRR Trigger: TCGCCTCTTCTTTTGGAAGCAAGTGGCAGAAAAAGT...TCTGGCCCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACACACACACACACCCCTCCAGAAGTGTCGTAGCCAAAGCCTaGCAGGCTGACTTCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTHPSRSVVAKA*QADFIT Trigger: TGTGATGAAGTCAGCCTGGCAGGCTTTGGCTACGAC...ACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR GCA 90 bp | TCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACAGTCTGTGGTCACATTGTaGATGACCTGCCAGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SAISSTKQSSRPQYRASQSVVTL*MTCQCM Trigger: CATGCACTGGCAGGTCATGCACAATGTGACCACAGA...CTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACACACACACACCCCTCCAGAAGTTTAGAGGTGAACTCACTTaGCATTGCTCGGCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTPLQKFRGELT*HCSAGR Trigger: CCTGCCTGCCGAGCAATGCCAAGTGAGTTCACCTCT...AAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069994.11 |
||
| CDS-3UTR CCA 90 bp | TCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACCTTCTCATCTTGTGCTaGGTTCGGGTGTACCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPSVLPNRAADPSIGHHLLILC*VRVYHC Trigger: GCAATGGTACACCCGAACCCAGCACAAGATGAGAAG...GTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACCCCTCCAGAAGTTTAAAAGTGCCCTGACAGTTCGGGTGTACCATTaGAGGGAGGTCCTTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTPLQKFKSALTVRVYH*REVLEQ Trigger: TTGCTCAAGGACCTCCCTGCAATGGTACACCCGAAC...TGTCAGGGCACTTTTAAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CCA 90 bp | TCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACAGGGCTCTGGACTTTACTaGAGAACTTCCGGAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAISSTKQSSRPQYRASQGSGLY*RTSGIQ Trigger: TTGGATTCCGGAAGTTCTCCAGTAAAGTCCAGAGCC...CTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR GCA 90 bp | TCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACATCACTTCTCAGCTTTaGAGAGGTGAACTCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPSVLPNRAADPSIGHHITSQL*RGELTW Trigger: CCAAGTGAGTTCACCTCTGCAAAGCTGAGAAGTGAT...GTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR GCA 90 bp | CTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGCAAATGCAACCAACGTaGACTTGCAGATGTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPNRAADPSIGHHSHHPGQMQPT*TCRCLL Trigger: TAAAAGACATCTGCAAGTGCACGTTGGTTGCATTTG...CCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACCCCTCCAGAAGTTTAAAAGTGCCCTGACACAGTGGCGCACCCTCTaGGTAAGTCATCCTTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTPLQKFKSALTQWRTL*VSHPYS Trigger: ACTATAAGGATGACTTACCCAGAGGGTGCGCCACTG...TGTCAGGGCACTTTTAAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACACACACACACCCCTCCAGAAGTTTGGCTCTGGACTTTACTaGAGAACTTCCGGAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTPLQKFGSGLY*RTSGIQ Trigger: TTGGATTCCGGAAGTTCTCCAGTAAAGTCCAGAGCC...AAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGGAAGTTTCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAATATCCAAGAGGCTCTaGACTTTACTGGAGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGRKFLCHQFYQTEQQTPISKRL*TLLENF Trigger: GAAGTTCTCCAGTAAAGTCCAGAGCCTCTTGGATAT...TGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGAAACTTCCTGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CCA 90 bp | GCCCTTTATCCTGGAGGCAGGAAGTTTCTCTGCCATCAGTTCTACCAAACAGAGGCTTCAGGAGGAACTTaGTCTCTGTGGTCACATTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALYPGGRKFLCHQFYQTEASGGT*SLWSHC Trigger: ACAATGTGACCACAGAGACCAAGTTCCTCCTGAAGC...CTCTGTTTGGTAGAACTGATGGCAGAGAAACTTCCTGCCTCCAGGATAAAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACACACACCCCTCCAGAAGTTTCGGTGTAATTCAAAATaGGGATGTACAGGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTPLQKFRCNSK*GCTGAR Trigger: TCTGGCTCCTGTACATCCTCATTTTGAATTACACCG...AAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR TCA 90 bp | TCCCATGGCCTGGATAACAAAGGCTTTGTCATAATTTCTATGAACCATCTCATACCACCACGCCCTCCTTaGGGAGCTTCAGGAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SHGLDNKGFVIISMNHLIPPRPP*GASGGT Trigger: AGTTCCTCCTGAAGCTCCTCAAGGAGGGCGTGGTGG...TATGAGATGGTTCATAGAAATTATGACAAAGCCTTTGTTATCCAGGCCATGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR TCA 90 bp | TCCCATGGCCTGGATAACAAAGGCTTTGTCATAATTTCTATGAACCATCTCATAAAGGCGGGTCATACTTaGGCTCAGCTTCACTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SHGLDNKGFVIISMNHLIKAGHT*AQLHWP Trigger: CGGCCAGTGAAGCTGAGCTCAAGTATGACCCGCCTT...TATGAGATGGTTCATAGAAATTATGACAAAGCCTTTGTTATCCAGGCCATGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR TCA 90 bp | TCCCATGGCCTGGATAACAAAGGCTTTGTCATAATTTCTATGAACCATCTCATACCACATCGAACTGGTTaGGGGCGTGACCCAGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SHGLDNKGFVIISMNHLIPHRTG*GRDPAL Trigger: TAGAGCTGGGTCACGCCCTCAACCAGTTCGATGTGG...TATGAGATGGTTCATAGAAATTATGACAAAGCCTTTGTTATCCAGGCCATGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR GCA 90 bp | TCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCAACCAACGTGCACTTaGAGATGTCTTTTATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: SAISSTKQSSRPQYRASQQPTCT*RCLLLT Trigger: TGTTAATAAAAGACATCTGCAAGTGCACGTTGGTTG...CTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACACACACACACACCCCTCCAGAAGTCAAATGCAACCAACGTaGACTTGCAGATGTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTHPSRSQMQPT*TCRCLL Trigger: TAAAAGACATCTGCAAGTGCACGTTGGTTGCATTTG...ACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACCCCTCCAGAAGTTTAAAAGTGCCCTGACAACTTTTTCTGCCACTTaGTTCCAAAAGAAGAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTPLQKFKSALTTFSAT*FQKKRR Trigger: TCGCCTCTTCTTTTGGAAGCAAGTGGCAGAAAAAGT...TGTCAGGGCACTTTTAAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGGAAGTTTCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCACTTTTATTAACAAGCTaGGTCTTCTCATCTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGRKFLCHQFYQTEQQTPLLLTS*VFSSCA Trigger: AGCACAAGATGAGAAGACCCAGCTTGTTAATAAAAG...TGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGAAACTTCCTGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTCTTTTCTTTTTCCTCTTCCCATGGCCTGGATAACAAAGGCTTTGTCACAACCACACAGCGCTTaGAGGCCTTGGCTCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSFLFPLPMAWITKALSQPHSA*RPWLSS Trigger: ACTTGAGAGCCAAGGCCTGCAAGCGCTGTGTGGTTG...TGACAAAGCCTTTGTTATCCAGGCCATGGGAAGAGGAAAAAGAAAAGAAAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGATAACAAAGGCTTTGTCATAATTTCTATGAACCATCTCATACAAACACCGTCTTCGCGTACCTaGGCCGACATTCCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLDNKGFVIISMNHLIQTPSSRT*ADIPSA Trigger: TGCAGAAGGAATGTCGGCCCAGGTACGCGAAGACGG...TGTTTGTATGAGATGGTTCATAGAAATTATGACAAAGCCTTTGTTATCCAGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CCA 90 bp | TCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACTTCTTTGATGATAACTaGGTTCAAAATCCTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPSVLPNRAADPSIGHHFFDDN*VQNPEV Trigger: CACTTCAGGATTTTGAACCCAGTTATCATCAAAGAA...GTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACACACACACACCCCTCCAGAAGTTTCAACCAACGTGCACTTaGAGATGTCTTTTATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTPLQKFQPTCT*RCLLLT Trigger: TGTTAATAAAAGACATCTGCAAGTGCACGTTGGTTG...AAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGATAACAAAGGCTTTGTCATAATTTCTATGAACCATCTCATACAAACACAGCTTCACTGGCCGTaGGGACCTTCTGCACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLDNKGFVIISMNHLIQTQLHWP*GPSAQK Trigger: CTTTTGTGCAGAAGGTCCCCACGGCCAGTGAAGCTG...TGTTTGTATGAGATGGTTCATAGAAATTATGACAAAGCCTTTGTTATCCAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR CCA 90 bp | TTTCTTTCTTTTCTTTTTCCTCTTCCCATGGCCTGGATAACAAAGGCTTTGTCAAGCGCTTGCAGGCCTTaGCTCTCAAGTGTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLSFLFPLPMAWITKALSSACRP*LSSVQE Trigger: TTCCTGAACACTTGAGAGCCAAGGCCTGCAAGCGCT...TGACAAAGCCTTTGTTATCCAGGCCATGGGAAGAGGAAAAAGAAAAGAAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR CCA 90 bp | TCCCATGGCCTGGATAACAAAGGCTTTGTCATAATTTCTATGAACCATCTCATAAGCGCTTGCAGGCCTTaGCTCTCAAGTGTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHGLDNKGFVIISMNHLISACRP*LSSVQE Trigger: TTCCTGAACACTTGAGAGCCAAGGCCTGCAAGCGCT...TATGAGATGGTTCATAGAAATTATGACAAAGCCTTTGTTATCCAGGCCATGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR CCA 90 bp | GCCCTTTATCCTGGAGGCAGGAAGTTTCTCTGCCATCAGTTCTACCAAACAGAGTTCTTTGATGATAACTaGGTTCAAAATCCTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALYPGGRKFLCHQFYQTEFFDDN*VQNPEV Trigger: CACTTCAGGATTTTGAACCCAGTTATCATCAAAGAA...CTCTGTTTGGTAGAACTGATGGCAGAGAAACTTCCTGCCTCCAGGATAAAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS-3UTR TCA 90 bp | GGCCTGGATAACAAAGGCTTTGTCATAATTTCTATGAACCATCTCATACAAACATTGCAGGGAGGTCCTTaGGCAATCACTTCTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLDNKGFVIISMNHLIQTLQGGP*AITSQL Trigger: AAGCTGAGAAGTGATTGCTCAAGGACCTCCCTGCAA...TGTTTGTATGAGATGGTTCATAGAAATTATGACAAAGCCTTTGTTATCCAGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS CCA 90 bp | GGCGGATCGCCGCTATCTGGGCTCCCCGGTGTCCGCTCTGCCGACTaGGGGCTGCGCCACGTACCTCGGCAGGCAGGTGCCGCTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGSPLSGLPGVRSAD*GLRHVPRQAGAAAW Trigger: CCAAGCAGCGGCACCTGCCTGCCGAGGTACGTGGCGCAGCCCCCAGTCGGCAGAGCGGACACCGGGGAGCCCAGATAGCGGCGATCCGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187007.3 |
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| CDS GCA 90 bp | TCGCAAAGGCGGATCGCCGCTATCTGGGCTCCCCGGTGTCCGCTCTaGCGACTGGGGGCTGCGCCACGTACCTCGGCAGGCAGGTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SQRRIAAIWAPRCPL*RLGAAPRTSAGRCR Trigger: GCGGCACCTGCCTGCCGAGGTACGTGGCGCAGCCCCCAGTCGGCAGAGCGGACACCGGGGAGCCCAGATAGCGGCGATCCGCCTTTGCGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187007.3 |
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| CDS GCA 90 bp | TTCCTGAGCATAGCTCTGAGCTCTCCGCAGCGCCGCGTCCACACCTaGGCAGGCTGCGCCGGGGGCGCCCATGTAGGCAGCCAGGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FLSIALSSPQRRVHT*AGCAGGAHVGSQGP Trigger: CGGCCCCTGGCTGCCTACATGGGCGCCCCCGGCGCAGCCTGCGCAGGTGTGGACGCGGCGCTGCGGAGAGCTCAGAGCTATGCTCAGGAA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187007.3 |
||
| CDS CCA 90 bp | GAGGTGAACTCACTTGGCATTGCTCGGCAGGCAGGTGCCGCTGCTTaGCTTCGCAGCTTCTGGGGCCTCCGCGCCGCGCCGCCCACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: EVNSLGIARQAGAAA*LRSFWGLRAAPPTA Trigger: GGCGGTGGGCGGCGCGGCGCGGAGGCCCCAGAAGCTGCGAAGCCAAGCAGCGGCACCTGCCTGCCGAGCAATGCCAAGTGAGTTCACCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069994.11 |
||
| CDS GCA 90 bp | TGCAGAGGTGAACTCACTTGGCATTGCTCGGCAGGCAGGTGCCGCTaGTTGGCTTCGCAGCTTCTGGGGCCTCCGCGCCGCGCCGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CRGELTWHCSAGRCR*LASQLLGPPRRAAH Trigger: GTGGGCGGCGCGGCGCGGAGGCCCCAGAAGCTGCGAAGCCAAGCAGCGGCACCTGCCTGCCGAGCAATGCCAAGTGAGTTCACCTCTGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069994.11 |
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| CDS GCA 90 bp | CAGCTTTGCAGAGGTGAACTCACTTGGCATTGCTCGGCAGGCAGGTaGCGCTGCTTGGCTTCGCAGCTTCTGGGGCCTCCGCGCCGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QLCRGELTWHCSAGR*RCLASQLLGPPRRA Trigger: GGCGCGGCGCGGAGGCCCCAGAAGCTGCGAAGCCAAGCAGCGGCACCTGCCTGCCGAGCAATGCCAAGTGAGTTCACCTCTGCAAAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069994.11 |
||
| CDS TCA 90 bp | GGCGCACTGTTCAACCTTATTACCACATCGAACTGGTTGAGGGCGTaGCCCAGCTCTAGTCCGTGCAGGATGCCCCCGTTCCCAACAACC | + |
|
Preference number: 5 (lower is better) Translates to: GALFNLITTSNWLRA*PSSSPCRMPPFPTT Trigger: GGTTGTTGGGAACGGGGGCATCCTGCACGGACTAGAGCTGGGTCACGCCCTCAACCAGTTCGATGTGGTAATAAGGTTGAACAGTGCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS TCA 90 bp | CCTCAACTGGCGCACTGTTCAACCTTATTACCACATCGAACTGGTTaGGGGCGTGACCCAGCTCTAGTCCGTGCAGGATGCCCCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PQLAHCSTLLPHRTG*GRDPALVRAGCPRS Trigger: GGAACGGGGGCATCCTGCACGGACTAGAGCTGGGTCACGCCCTCAACCAGTTCGATGTGGTAATAAGGTTGAACAGTGCGCCAGTTGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS GCA 90 bp | CTAGTCCGTGCAGGATGCCCCCGTTCCCAACAACCACACAGCGCTTaGAGGCCTTGGCTCTCAAGTGTTCAGGAAAGTCATGTTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LVRAGCPRSQQPHSA*RPWLSSVQESHVRA Trigger: TGCCCGAACATGACTTTCCTGAACACTTGAGAGCCAAGGCCTGCAAGCGCTGTGTGGTTGTTGGGAACGGGGGCATCCTGCACGGACTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS GCA 90 bp | GTAGTGCAGAGGGGTCCTGGGTTGACTGAGGTCGTAGCCAAAGCCTaGCAGGCTGACTTCATCACACAGATGTGTAGCCAAGACAACGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVQRGPGLTEVVAKA*QADFITQMCSQDNG Trigger: GCCGTTGTCTTGGCTACACATCTGTGTGATGAAGTCAGCCTGGCAGGCTTTGGCTACGACCTCAGTCAACCCAGGACCCCTCTGCACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS CCA 90 bp | GCAGGATGCCCCCGTTCCCAACAACCACACAGCGCTTGCAGGCCTTaGCTCTCAAGTGTTCAGGAAAGTCATGTTCGGGCAGCATATCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGCPRSQQPHSACRP*LSSVQESHVRAAYP Trigger: TGGATATGCTGCCCGAACATGACTTTCCTGAACACTTGAGAGCCAAGGCCTGCAAGCGCTGTGTGGTTGTTGGGAACGGGGGCATCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS-3UTR CAA 90 bp | AACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGGCCAGACATGGCCCCAGAATCTaGACTGAGGCTCTGAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: NRAADPSIGHHSHHPGARHGPRI*TEALST Trigger: AGTACTCAGAGCCTCAGTCAAGATTCTGGGGCCATG...TCTGGCCCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAGGAAGTTTCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCACAGCGCTTGCAGGCCTaGGCTCTCAAGTGTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGRKFLCHQFYQTEQQTPQRLQA*ALKCSG Trigger: TCCTGAACACTTGAGAGCCAAGGCCTGCAAGCGCTG...TGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGAAACTTCCTGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACAACCACACAGCGCTaGCAGGCCTTGGCTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLCHQFYQTEQQTPVSGITTTQR*QALALK Trigger: CTTGAGAGCCAAGGCCTGCAAGCGCTGTGTGGTTGT...GATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CAA 90 bp | GTGAAGTCCCTGTGGAGGCTGCTCACCACGCTCTCAGCTGCGGTGCTGGGTGAGTCGAAGGCAGTTTCTTaGATGATAACTGGGTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VKSLWRLLTTLSAAVLGESKAVS*MITGFK Trigger: TTTGAACCCAGTTATCATCAAAGAAACTGCCTTCGA...CTCACCCAGCACCGCAGCTGAGAGCGTGGTGAGCAGCCTCCACAGGGACTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CAA 90 bp | CTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCACAGCCATCATCCAGGGACAAAAGGCTCCAAGTaGATGCTGTACCTGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPNRAADPSIGHHSHHPGTKGSK*MLYLSS Trigger: TGAGGACAGGTACAGCATCAACTTGGAGCCTTTTGT...CCCTGGATGATGGCTGTGATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACCCCTCCAGAAGTTTAAAAGTGCCCTGACAACAACCACACAGCGCTaGCAGGCCTTGGCTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTPLQKFKSALTTTTQR*QALALK Trigger: CTTGAGAGCCAAGGCCTGCAAGCGCTGTGTGGTTGT...TGTCAGGGCACTTTTAAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS GCA 90 bp | AACAAGCTGGGTCTTCTCATCTTGTGCTGGGTTCGGGTGTACCATTaGAGGGAGGTCCTTGAGCAATCACTTCTCAGCTTTGCAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NKLGLLILCWVRVYH*REVLEQSLLSFAEV Trigger: CACCTCTGCAAAGCTGAGAAGTGATTGCTCAAGGACCTCCCTGCAATGGTACACCCGAACCCAGCACAAGATGAGAAGACCCAGCTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCCATGGCCCCAGAATCTaGACTGAGGCTCTGAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: FLCHQFYQTEQQTPVSGIHGPRI*TEALST Trigger: AGTACTCAGAGCCTCAGTCAAGATTCTGGGGCCATG...GATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS TCA 90 bp | TCTCATCTTGTGCTGGGTTCGGGTGTACCATTGCAGGGAGGTCCTTaGGCAATCACTTCTCAGCTTTGCAGAGGTGAACTCACTTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SHLVLGSGVPLQGGP*AITSQLCRGELTWH Trigger: ATGCCAAGTGAGTTCACCTCTGCAAAGCTGAGAAGTGATTGCTCAAGGACCTCCCTGCAATGGTACACCCGAACCCAGCACAAGATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTGCCATCAGTTCTACCAAACAGAGCAGCAGACCCCAGTATCGGGCATCAGCTTCAGGAGGAACTaGGTCTCTGTGGTCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: FLCHQFYQTEQQTPVSGISFRRN*VSVVTL Trigger: CAATGTGACCACAGAGACCAAGTTCCTCCTGAAGCT...GATGCCCGATACTGGGGTCTGCTGCTCTGTTTGGTAGAACTGATGGCAGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACCCCTCCAGAAGTTTAAAAGTGCCCTGACAATTGCAGGGAGGTCCTaGAGCAATCACTTCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTPLQKFKSALTIAGRS*SNHFSA Trigger: AGCTGAGAAGTGATTGCTCAAGGACCTCCCTGCAAT...TGTCAGGGCACTTTTAAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CAA 90 bp | GAGGTGATGAGTAAGCCCTTTATCCTGGAGGCAGGAAGTTTCTCTGCCATCAGTAGCTTCAGGAGGAACTaGGTCTCTGTGGTCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: EVMSKPFILEAGSFSAISSFRRN*VSVVTL Trigger: CAATGTGACCACAGAGACCAAGTTCCTCCTGAAGCT...ACTGATGGCAGAGAAACTTCCTGCCTCCAGGATAAAGGGCTTACTCATCACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS CCA 90 bp | AAGTGTTCAGGAAAGTCATGTTCGGGCAGCATATCCAAGAGGCTCTaGACTTTACTGGAGAACTTCCGGAATCCAAAAGGCGGGTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: KCSGKSCSGSISKRL*TLLENFRNPKGGSY Trigger: GTATGACCCGCCTTTTGGATTCCGGAAGTTCTCCAGTAAAGTCCAGAGCCTCTTGGATATGCTGCCCGAACATGACTTTCCTGAACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACACACACACCCCTCCAGAAGTTTGACTTTTTCTGCCACTaGCTTCCAAAAGAAGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHTHTHTHTPLQKFDFFCH*LPKEEA Trigger: CGCCTCTTCTTTTGGAAGCAAGTGGCAGAAAAAGTC...AAACTTCTGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS GCA 90 bp | CACTTGCAGATGTCTTTTATTAACAAGCTGGGTCTTCTCATCTTGTaGTGGGTTCGGGTGTACCATTGCAGGGAGGTCCTTGAGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: HLQMSFINKLGLLIL*WVRVYHCREVLEQS Trigger: TGATTGCTCAAGGACCTCCCTGCAATGGTACACCCGAACCCAGCACAAGATGAGAAGACCCAGCTTGTTAATAAAAGACATCTGCAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
||
| CDS CCA 90 bp | CAAATGCAACCAACGTGCACTTGCAGATGTCTTTTATTAACAAGCTaGGTCTTCTCATCTTGTGCTGGGTTCGGGTGTACCATTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QMQPTCTCRCLLLTS*VFSSCAGFGCTIAG Trigger: CCCTGCAATGGTACACCCGAACCCAGCACAAGATGAGAAGACCCAGCTTGTTAATAAAAGACATCTGCAAGTGCACGTTGGTTGCATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCCCTCTCCTCCCACCTCAACACCTGAGCAGAGTACGTGTGTACAGTTTTCGAAGGCAGTTTCTTaGATGATAACTGGGTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSPSPPTSTPEQSTCVQFSKAVS*MITGFK Trigger: TTTGAACCCAGTTATCATCAAAGAAACTGCCTTCGA...AAACTGTACACACGTACTCTGCTCAGGTGTTGAGGTGGGAGGAGAGGGGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS CCA 90 bp | TTGCAGATGTCTTTTATTAACAAGCTGGGTCTTCTCATCTTGTGCTaGGTTCGGGTGTACCATTGCAGGGAGGTCCTTGAGCAATCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LQMSFINKLGLLILC*VRVYHCREVLEQSL Trigger: AAGTGATTGCTCAAGGACCTCCCTGCAATGGTACACCCGAACCCAGCACAAGATGAGAAGACCCAGCTTGTTAATAAAAGACATCTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
||
| CDS CCA 90 bp | CAAATCATTGGCGTAGTATTCAACGTCCGACAGTGGCGCACCCTCTaGGTAAGTCATCCTTATAGTAGTTTTATTCCCAACGTGTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QIIGVVFNVRQWRTL*VSHPYSSFIPNVFR Trigger: TCTGAACACGTTGGGAATAAAACTACTATAAGGATGACTTACCCAGAGGGTGCGCCACTGTCGGACGTTGAATACTACGCCAATGATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS CCA 90 bp | AACAGTAACGAACAAATCATTGGCGTAGTATTCAACGTCCGACAGTaGCGCACCCTCTGGGTAAGTCATCCTTATAGTAGTTTTATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NSNEQIIGVVFNVRQ*RTLWVSHPYSSFIP Trigger: GGGAATAAAACTACTATAAGGATGACTTACCCAGAGGGTGCGCCACTGTCGGACGTTGAATACTACGCCAATGATTTGTTCGTTACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CAA 90 bp | TTTCTTTCTTTTCTTTTTCCTCTTCCCATGGCCTGGATAACAAAGGCTTTGTCAATTGCAGGGAGGTCCTaGAGCAATCACTTCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLSFLFPLPMAWITKALSIAGRS*SNHFSA Trigger: AGCTGAGAAGTGATTGCTCAAGGACCTCCCTGCAAT...TGACAAAGCCTTTGTTATCCAGGCCATGGGAAGAGGAAAAAGAAAAGAAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CAA 90 bp | TCCCATGGCCTGGATAACAAAGGCTTTGTCATAATTTCTATGAACCATCTCATAACAAAAGGCTCCAAGTaGATGCTGTACCTGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SHGLDNKGFVIISMNHLITKGSK*MLYLSS Trigger: TGAGGACAGGTACAGCATCAACTTGGAGCCTTTTGT...TATGAGATGGTTCATAGAAATTATGACAAAGCCTTTGTTATCCAGGCCATGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS-3UTR CAA 90 bp | TTTCTTTCTTTTCTTTTTCCTCTTCCCATGGCCTGGATAACAAAGGCTTTGTCAGACTTTTTCTGCCACTaGCTTCCAAAAGAAGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FLSFLFPLPMAWITKALSDFFCH*LPKEEA Trigger: CGCCTCTTCTTTTGGAAGCAAGTGGCAGAAAAAGTC...TGACAAAGCCTTTGTTATCCAGGCCATGGGAAGAGGAAAAAGAAAAGAAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS GCA 72 bp | CTGGGCTCCCCGGTGTCCGCTCTGCCGACTGGGGGCTaGGCCACGTACCTCGGCAGGCAGGTGCCGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGSPVSALPTGG*ATYLGRQVPLL Trigger: AAGCAGCGGCACCTGCCTGCCGAGGTACGTGGCGCAGCCCCCAGTCGGCAGAGCGGACACCGGGGAGCCCAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187007.3 |
||
| CDS GCA 72 bp | CGGATCGCCGCTATCTGGGCTCCCCGGTGTCCGCTCTaGCGACTGGGGGCTGCGCCACGTACCTCGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RIAAIWAPRCPL*RLGAAPRTSAG Trigger: GCCTGCCGAGGTACGTGGCGCAGCCCCCAGTCGGCAGAGCGGACACCGGGGAGCCCAGATAGCGGCGATCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187007.3 |
||
| CDS CCA 72 bp | CCGCTATCTGGGCTCCCCGGTGTCCGCTCTGCCGACTaGGGGCTGCGCCACGTACCTCGGCAGGCAGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLSGLPGVRSAD*GLRHVPRQAGA Trigger: GGCACCTGCCTGCCGAGGTACGTGGCGCAGCCCCCAGTCGGCAGAGCGGACACCGGGGAGCCCAGATAGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187007.3 |
||
| CDS CCA 72 bp | GGCGCGTCCGGCGTCGCAGGGCTGGGGAGGAGCCGCTaGGCCTGGGGTATCGCAAAGGCGGATCGCCGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: GASGVAGLGRSR*AWGIAKADRRY Trigger: ATAGCGGCGATCCGCCTTTGCGATACCCCAGGCCCAGCGGCTCCTCCCCAGCCCTGCGACGCCGGACGCGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187007.3 |
||
| CDS CCA 72 bp | TCACTTGGCATTGCTCGGCAGGCAGGTGCCGCTGCTTaGCTTCGCAGCTTCTGGGGCCTCCGCGCCGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SLGIARQAGAAA*LRSFWGLRAAP Trigger: CGGCGCGGCGCGGAGGCCCCAGAAGCTGCGAAGCCAAGCAGCGGCACCTGCCTGCCGAGCAATGCCAAGTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069994.11 |
||
| CDS CAA 72 bp | CTCACTTGGCATTGCTCGGCAGGCAGGTGCCGCTGCTaGGCTTCGCAGCTTCTGGGGCCTCCGCGCCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LTWHCSAGRCRC*ASQLLGPPRRA Trigger: GGCGCGGCGCGGAGGCCCCAGAAGCTGCGAAGCCAAGCAGCGGCACCTGCCTGCCGAGCAATGCCAAGTGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069994.11 |
||
| CDS CAA 90 bp | AGAGGTGAACTCACTTGGCATTGCTCGGCAGGCAGGTGCCGCTGCTaGGCTTCGCAGCTTCTGGGGCCTCCGCGCCGCGCCGCCCACCGC | + |
|
Preference number: 6 (lower is better) Translates to: RGELTWHCSAGRCRC*ASQLLGPPRRAAHR Trigger: GCGGTGGGCGGCGCGGCGCGGAGGCCCCAGAAGCTGCGAAGCCAAGCAGCGGCACCTGCCTGCCGAGCAATGCCAAGTGAGTTCACCTCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069994.11 |
||
| CDS GCA 72 bp | AGAGGTGAACTCACTTGGCATTGCTCGGCAGGCAGGTaGCGCTGCTTGGCTTCGCAGCTTCTGGGGCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RGELTWHCSAGR*RCLASQLLGPP Trigger: CGGAGGCCCCAGAAGCTGCGAAGCCAAGCAGCGGCACCTGCCTGCCGAGCAATGCCAAGTGAGTTCACCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069994.11 |
||
| CDS CAA 90 bp | TCTAGTCCGTGCAGGATGCCCCCGTTCCCAACAACCACACAGCGCTaGCAGGCCTTGGCTCTCAAGTGTTCAGGAAAGTCATGTTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSPCRMPPFPTTTQR*QALALKCSGKSCSG Trigger: GCCCGAACATGACTTTCCTGAACACTTGAGAGCCAAGGCCTGCAAGCGCTGTGTGGTTGTTGGGAACGGGGGCATCCTGCACGGACTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS CAA 90 bp | GGCGCCCATGCACTGACTGTCAAAGTAGTGCAGAGGGGTCCTGGGTaGACTGAGGTCGTAGCCAAAGCCTGCCAGGCTGACTTCATCACA | + |
|
Preference number: 6 (lower is better) Translates to: GAHALTVKVVQRGPG*TEVVAKACQADFIT Trigger: TGTGATGAAGTCAGCCTGGCAGGCTTTGGCTACGACCTCAGTCAACCCAGGACCCCTCTGCACTACTTTGACAGTCAGTGCATGGGCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS GCA 72 bp | ACTTCTCAGCTTTGCAGAGGTGAACTCACTTGGCATTaGTCGGCAGGCAGGTGCCGCTGCTTGGCTTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TSQLCRGELTWH*SAGRCRCLASQ Trigger: CTGCGAAGCCAAGCAGCGGCACCTGCCTGCCGAGCAATGCCAAGTGAGTTCACCTCTGCAAAGCTGAGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069994.11 |
||
| CDS CAA 72 bp | CCCCCGTTCCCAACAACCACACAGCGCTTGCAGGCCTaGGCTCTCAAGTGTTCAGGAAAGTCATGTTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPFPTTTQRLQA*ALKCSGKSCSG Trigger: GCCCGAACATGACTTTCCTGAACACTTGAGAGCCAAGGCCTGCAAGCGCTGTGTGGTTGTTGGGAACGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS CAA 90 bp | TGCAGGATGCCCCCGTTCCCAACAACCACACAGCGCTTGCAGGCCTaGGCTCTCAAGTGTTCAGGAAAGTCATGTTCGGGCAGCATATCC | + |
|
Preference number: 6 (lower is better) Translates to: CRMPPFPTTTQRLQA*ALKCSGKSCSGSIS Trigger: GGATATGCTGCCCGAACATGACTTTCCTGAACACTTGAGAGCCAAGGCCTGCAAGCGCTGTGTGGTTGTTGGGAACGGGGGCATCCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS GCA 72 bp | GCAGGATGCCCCCGTTCCCAACAACCACACAGCGCTTaGAGGCCTTGGCTCTCAAGTGTTCAGGAAAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: AGCPRSQQPHSA*RPWLSSVQESH Trigger: ATGACTTTCCTGAACACTTGAGAGCCAAGGCCTGCAAGCGCTGTGTGGTTGTTGGGAACGGGGGCATCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS CCA 72 bp | GCAATCACTTCTCAGCTTTGCAGAGGTGAACTCACTTaGCATTGCTCGGCAGGCAGGTGCCGCTGCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AITSQLCRGELT*HCSAGRCRCLA Trigger: AGCCAAGCAGCGGCACCTGCCTGCCGAGCAATGCCAAGTGAGTTCACCTCTGCAAAGCTGAGAAGTGATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069994.11 |
||
| CDS CCA 72 bp | CCCCGTTCCCAACAACCACACAGCGCTTGCAGGCCTTaGCTCTCAAGTGTTCAGGAAAGTCATGTTCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PRSQQPHSACRP*LSSVQESHVRA Trigger: TGCCCGAACATGACTTTCCTGAACACTTGAGAGCCAAGGCCTGCAAGCGCTGTGTGGTTGTTGGGAACGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS CAA 72 bp | CTGGAGAACTTCCGGAATCCAAAAGGCGGGTCATACTaGAGCTCAGCTTCACTGGCCGTGGGGACCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LENFRNPKGGSY*SSASLAVGTFC Trigger: GCAGAAGGTCCCCACGGCCAGTGAAGCTGAGCTCAAGTATGACCCGCCTTTTGGATTCCGGAAGTTCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS CAA 72 bp | TGCAGGATGCCCCCGTTCCCAACAACCACACAGCGCTaGCAGGCCTTGGCTCTCAAGTGTTCAGGAAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CRMPPFPTTTQR*QALALKCSGKS Trigger: TGACTTTCCTGAACACTTGAGAGCCAAGGCCTGCAAGCGCTGTGTGGTTGTTGGGAACGGGGGCATCCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS CAA 72 bp | AGGAGCTTCAGGAGGAACTTGGTCTCTGTGGTCACATaGTGCATGACCTGCCAGTGCATGGCGCCCATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RSFRRNLVSVVT*CMTCQCMAPMH Trigger: GTGCATGGGCGCCATGCACTGGCAGGTCATGCACAATGTGACCACAGAGACCAAGTTCCTCCTGAAGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS CAA 72 bp | TCCACCACGCCCTCCTTGAGGAGCTTCAGGAGGAACTaGGTCTCTGTGGTCACATTGTGCATGACCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: STTPSLRSFRRN*VSVVTLCMTCQ Trigger: CTGGCAGGTCATGCACAATGTGACCACAGAGACCAAGTTCCTCCTGAAGCTCCTCAAGGAGGGCGTGGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS TCA 72 bp | TGGAGAACTTCCGGAATCCAAAAGGCGGGTCATACTTaGGCTCAGCTTCACTGGCCGTGGGGACCTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: WRTSGIQKAGHT*AQLHWPWGPSA Trigger: TGCAGAAGGTCCCCACGGCCAGTGAAGCTGAGCTCAAGTATGACCCGCCTTTTGGATTCCGGAAGTTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS TCA 72 bp | TTCAACCTTATTACCACATCGAACTGGTTGAGGGCGTaGCCCAGCTCTAGTCCGTGCAGGATGCCCCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FNLITTSNWLRA*PSSSPCRMPPF Trigger: GAACGGGGGCATCCTGCACGGACTAGAGCTGGGTCACGCCCTCAACCAGTTCGATGTGGTAATAAGGTTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS TCA 72 bp | GCGCACTGTTCAACCTTATTACCACATCGAACTGGTTaGGGGCGTGACCCAGCTCTAGTCCGTGCAGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: AHCSTLLPHRTG*GRDPALVRAGC Trigger: GCATCCTGCACGGACTAGAGCTGGGTCACGCCCTCAACCAGTTCGATGTGGTAATAAGGTTGAACAGTGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
||
| CDS TCA 72 bp | TCAGGAGGAACTTGGTCTCTGTGGTCACATTGTGCATaGCCTGCCAGTGCATGGCGCCCATGCACTGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: SGGTWSLWSHCA*PASAWRPCTDC Trigger: ACAGTCAGTGCATGGGCGCCATGCACTGGCAGGTCATGCACAATGTGACCACAGAGACCAAGTTCCTCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS GCA 72 bp | AGGGGTCCTGGGTTGACTGAGGTCGTAGCCAAAGCCTaGCAGGCTGACTTCATCACACAGATGTGTAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RGPGLTEVVAKA*QADFITQMCSQ Trigger: TTGGCTACACATCTGTGTGATGAAGTCAGCCTGGCAGGCTTTGGCTACGACCTCAGTCAACCCAGGACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
||
| CDS TCA 72 bp | GTGCTGGGTTCGGGTGTACCATTGCAGGGAGGTCCTTaGGCAATCACTTCTCAGCTTTGCAGAGGTGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: VLGSGVPLQGGP*AITSQLCRGEL Trigger: GAGTTCACCTCTGCAAAGCTGAGAAGTGATTGCTCAAGGACCTCCCTGCAATGGTACACCCGAACCCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
||
| CDS GCA 72 bp | GGTCTTCTCATCTTGTGCTGGGTTCGGGTGTACCATTaGAGGGAGGTCCTTGAGCAATCACTTCTCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: GLLILCWVRVYH*REVLEQSLLSF Trigger: AAAGCTGAGAAGTGATTGCTCAAGGACCTCCCTGCAATGGTACACCCGAACCCAGCACAAGATGAGAAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
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| CDS CCA 72 bp | GTTCGGGCAGCATATCCAAGAGGCTCTGGACTTTACTaGAGAACTTCCGGAATCCAAAAGGCGGGTCATACT | + |
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Preference number: 6 (lower is better) Translates to: VRAAYPRGSGLY*RTSGIQKAGHT Trigger: AGTATGACCCGCCTTTTGGATTCCGGAAGTTCTCCAGTAAAGTCCAGAGCCTCTTGGATATGCTGCCCGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000187007.3 |
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| CDS CAA 72 bp | CGATCGTGGGGATGTTCTTATCATGGCCCCAGAATCTaGACTGAGGCTCTGAGTACTGAAGGATGTCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: RSWGCSYHGPRI*TEALSTEGCRR Trigger: CCTTCGACATCCTTCAGTACTCAGAGCCTCAGTCAAGATTCTGGGGCCATGATAAGAACATCCCCACGATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS CAA 90 bp | GTGCACTTGCAGATGTCTTTTATTAACAAGCTGGGTCTTCTCATCTaGTGCTGGGTTCGGGTGTACCATTGCAGGGAGGTCCTTGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: VHLQMSFINKLGLLI*CWVRVYHCREVLEQ Trigger: TTGCTCAAGGACCTCCCTGCAATGGTACACCCGAACCCAGCACAAGATGAGAAGACCCAGCTTGTTAATAAAAGACATCTGCAAGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
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| CDS CCA 72 bp | TCTTTTATTAACAAGCTGGGTCTTCTCATCTTGTGCTaGGTTCGGGTGTACCATTGCAGGGAGGTCCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SFINKLGLLILC*VRVYHCREVLE Trigger: CTCAAGGACCTCCCTGCAATGGTACACCCGAACCCAGCACAAGATGAGAAGACCCAGCTTGTTAATAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
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| CDS CCA 72 bp | CCAACGTGCACTTGCAGATGTCTTTTATTAACAAGCTaGGTCTTCTCATCTTGTGCTGGGTTCGGGTGTACC | + |
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Preference number: 6 (lower is better) Translates to: PTCTCRCLLLTS*VFSSCAGFGCT Trigger: GGTACACCCGAACCCAGCACAAGATGAGAAGACCCAGCTTGTTAATAAAAGACATCTGCAAGTGCACGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
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| CDS CCA 72 bp | GGCGTAGTATTCAACGTCCGACAGTGGCGCACCCTCTaGGTAAGTCATCCTTATAGTAGTTTTATTCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: GVVFNVRQWRTL*VSHPYSSFIPN Trigger: GTTGGGAATAAAACTACTATAAGGATGACTTACCCAGAGGGTGCGCCACTGTCGGACGTTGAATACTACGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS CAA 72 bp | CAGATGTCTTTTATTAACAAGCTGGGTCTTCTCATCTaGTGCTGGGTTCGGGTGTACCATTGCAGGGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: QMSFINKLGLLI*CWVRVYHCREV Trigger: GACCTCCCTGCAATGGTACACCCGAACCCAGCACAAGATGAGAAGACCCAGCTTGTTAATAAAAGACATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
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| CDS GCA 72 bp | ATGTCTTTTATTAACAAGCTGGGTCTTCTCATCTTGTaGTGGGTTCGGGTGTACCATTGCAGGGAGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: MSFINKLGLLIL*WVRVYHCREVL Trigger: AAGGACCTCCCTGCAATGGTACACCCGAACCCAGCACAAGATGAGAAGACCCAGCTTGTTAATAAAAGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
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| CDS CCA 72 bp | GAACAAATCATTGGCGTAGTATTCAACGTCCGACAGTaGCGCACCCTCTGGGTAAGTCATCCTTATAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: EQIIGVVFNVRQ*RTLWVSHPYSS Trigger: ACTACTATAAGGATGACTTACCCAGAGGGTGCGCCACTGTCGGACGTTGAATACTACGCCAATGATTTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS CAA 90 bp | ATGAGGATGTACAGGAGCCAGACTCCAAATGCAACCAACGTGCACTaGCAGATGTCTTTTATTAACAAGCTGGGTCTTCTCATCTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: MRMYRSQTPNATNVH*QMSFINKLGLLILC Trigger: GCACAAGATGAGAAGACCCAGCTTGTTAATAAAAGACATCTGCAAGTGCACGTTGGTTGCATTTGGAGTCTGGCTCCTGTACATCCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
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| CDS GCA 72 bp | ACAGGAGCCAGACTCCAAATGCAACCAACGTGCACTTaGAGATGTCTTTTATTAACAAGCTGGGTCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TGARLQMQPTCT*RCLLLTSWVFS Trigger: TGAGAAGACCCAGCTTGTTAATAAAAGACATCTGCAAGTGCACGTTGGTTGCATTTGGAGTCTGGCTCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
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| CDS CCA 72 bp | CTGAAGGATGTCGAAGGCAGTTTCTTTGATGATAACTaGGTTCAAAATCCTGAAGTGCTTTGGCTGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LKDVEGSFFDDN*VQNPEVLWLEW Trigger: CCACTCCAGCCAAAGCACTTCAGGATTTTGAACCCAGTTATCATCAAAGAAACTGCCTTCGACATCCTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 |
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| CDS CAA 72 bp | TACAGGAGCCAGACTCCAAATGCAACCAACGTGCACTaGCAGATGTCTTTTATTAACAAGCTGGGTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: YRSQTPNATNVH*QMSFINKLGLL Trigger: GAGAAGACCCAGCTTGTTAATAAAAGACATCTGCAAGTGCACGTTGGTTGCATTTGGAGTCTGGCTCCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069994.11 ENSMUST00000114112.4 ENSMUST00000188366.3 |
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