Pregenerated sensors for ST3GAL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032038Ensembl transcript IDs: ENSMUST00000034537.8, ENSMUST00000213526.2, ENSMUST00000214526.2, ENSMUST00000215089.2, ENSMUST00000215463.2, ENSMUST00000215638.2, ENSMUST00000216557.2, ENSMUST00000217149.2, ENSMUST00000217542.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCTGGGAAGTAGCAACCTCTCTCTGGAGGACACCCTCCCACTCTTaGTGCCTCCATCTTTCTGGGAGGCCAGCTCTAGAATTGGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: CWEVATSLWRTPSHS*CLHLSGRPALELGL Trigger: AAGGCCCAATTCTAGAGCTGGCCTCCCAGAAAGATGGAGGCATCAAGAGTGGGAGGGTGTCCTCCAGAGAGAGGTTGCTACTTCCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGGGAAGTAGCAACCTCTCTCTGGAGGACACCCTCCCACTCTTGATGCCTCAAAACAGCTCTTTGTaGTGGCTGAGAGAGGGGATG | + |
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Preference number: 2 (lower is better) Translates to: LLGSSNLSLEDTLPLLMPQNSSL*WLREGM Trigger: CATCCCCTCTCTCAGCCAGCACAAAGAGCTGTTTTG...AGGCATCAAGAGTGGGAGGGTGTCCTCCAGAGAGAGGTTGCTACTTCCCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| 3UTR CAA 90 bp | GACAGCCCCAGAACACCCTCTCCATTGAGGGTGAGTTCAATTGGATaGTACTGGCACCAGGAACCTCTAAGCTGTAGACAGGGCCTACTC | + |
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Preference number: 2 (lower is better) Translates to: DSPRTPSPLRVSSIG*YWHQEPLSCRQGLL Trigger: GAGTAGGCCCTGTCTACAGCTTAGAGGTTCCTGGTGCCAGTACAATCCAATTGAACTCACCCTCAATGGAGAGGGTGTTCTGGGGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| 3UTR CAA 90 bp | CATAGCCTCTCTGGAGACCTGGACAGCCCCAGAACACCCTCTCCATaGAGGGTGAGTTCAATTGGATTGTACTGGCACCAGGAACCTCTA | + |
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Preference number: 2 (lower is better) Translates to: HSLSGDLDSPRTPSP*RVSSIGLYWHQEPL Trigger: TAGAGGTTCCTGGTGCCAGTACAATCCAATTGAACTCACCCTCAATGGAGAGGGTGTTCTGGGGCTGTCCAGGTCTCCAGAGAGGCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| 3UTR-3UTR TCA 90 bp | TACATAGTGAGTTCCAGATTAGCCAGGGTTTCACAGTCAGACCCTGTCTCAAGACCTGTAGCCTCGGTGTaGCTACCCTGTCTGGATTTG | + |
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Preference number: 2 (lower is better) Translates to: YIVSSRLARVSQSDPVSRPVASV*LPCLDL Trigger: CAAATCCAGACAGGGTAGTCACACCGAGGCTACAGG...TCTTGAGACAGGGTCTGACTGTGAAACCCTGGCTAATCTGGAACTCACTATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| 3UTR-3UTR CCA 90 bp | CATAGTGAGTTCCAGATTAGCCAGGGTTTCACAGTCAGACCCTGTCTCAAGAACAACAGCTCTTTGTGCTaGCTGAGAGAGGGGATGCCA | + |
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Preference number: 2 (lower is better) Translates to: HSEFQISQGFTVRPCLKNNSSLC*LREGMP Trigger: TGGCATCCCCTCTCTCAGCCAGCACAAAGAGCTGTT...GTTCTTGAGACAGGGTCTGACTGTGAAACCCTGGCTAATCTGGAACTCACTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTAGCCTCGGTGTGACTACCCTGTCTGGATTTGAAATCCACCAAAGTAGGGAGGGTGAGTTCAATTaGATTGTACTGGCACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SCSLGVTTLSGFEIHQSREGEFN*IVLAPG Trigger: TCCTGGTGCCAGTACAATCCAATTGAACTCACCCTC...CCTACTTTGGTGGATTTCAAATCCAGACAGGGTAGTCACACCGAGGCTACAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| 3UTR TCA 72 bp | GTAGCAACCTCTCTCTGGAGGACACCCTCCCACTCTTaGTGCCTCCATCTTTCTGGGAGGCCAGCTCTAGAA | + |
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Preference number: 3 (lower is better) Translates to: VATSLWRTPSHS*CLHLSGRPALE Trigger: TTCTAGAGCTGGCCTCCCAGAAAGATGGAGGCATCAAGAGTGGGAGGGTGTCCTCCAGAGAGAGGTTGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCTGGGAAGTAGCAACCTCTCTCTGGAGGACACCCTCCCACTCTTGATGCCTATGTTAAATAATCTCTaGGTGTTGGGGCCAGGCGTA | + |
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Preference number: 3 (lower is better) Translates to: LLGSSNLSLEDTLPLLMPMLNNL*VLGPGV Trigger: TACGCCTGGCCCCAACACCAAGAGATTATTTAACAT...AGGCATCAAGAGTGGGAGGGTGTCCTCCAGAGAGAGGTTGCTACTTCCCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| 3UTR CCA 72 bp | CAGGAACCTCTAAGCTGTAGACAGGGCCTACTCAGATaGCAAAGTAGGGAACCAAGGTGTTACAGCTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: QEPLSCRQGLLR*QSREPRCYSSH Trigger: ATGGGAGCTGTAACACCTTGGTTCCCTACTTTGCCATCTGAGTAGGCCCTGTCTACAGCTTAGAGGTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| 3UTR-3UTR CAA 90 bp | TGTGTCCCTTTCATGAACATCCTGGGACCAGCCCATTCATTTTCCTACCCCTTACTTTCATCCCAACACTaGGGAGGCAAAGGCAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: CVPFMNILGPAHSFSYPLLSSQH*GGKGSW Trigger: CCAACTGCCTTTGCCTCCCAAGTGTTGGGATGAAAG...TAAGGGGTAGGAAAATGAATGGGCTGGTCCCAGGATGTTCATGAAAGGGACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR GCA 90 bp | TTGGGGCCAGGCGTAGTACATGCCTTTCATCCCAACACTTGGGAGGCAAAGGCACCCGTGGTTGGCTTCTaGTTGATCTTTCGAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LGPGVVHAFHPNTWEAKAPVVGF*LIFRGC Trigger: ACAGCCTCGAAAGATCAAGCAGAAGCCAACCACGGG...TGCCTTTGCCTCCCAAGTGTTGGGATGAAAGGCATGTACTACGCCTGGCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CCA 90 bp | TTGGGGCCAGGCGTAGTACATGCCTTTCATCCCAACACTTGGGAGGCAAAGGCATTCGAGGCTGTTGTATaGGCAGGCTCAGGAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LGPGVVHAFHPNTWEAKAFEAVV*AGSGAC Trigger: ACAAGCTCCTGAGCCTGCCCATACAACAGCCTCGAA...TGCCTTTGCCTCCCAAGTGTTGGGATGAAAGGCATGTACTACGCCTGGCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| 3UTR CAA 72 bp | TCTGGAGACCTGGACAGCCCCAGAACACCCTCTCCATaGAGGGTGAGTTCAATTGGATTGTACTGGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: SGDLDSPRTPSP*RVSSIGLYWHQ Trigger: CTGGTGCCAGTACAATCCAATTGAACTCACCCTCAATGGAGAGGGTGTTCTGGGGCTGTCCAGGTCTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR TCA 90 bp | TCCTGTAGCCTCGGTGTGACTACCCTGTCTGGATTTGAAATCCACCAAAGTAGGGGAAGTCCATCGCCTTaGAAGCTACCAGGACCAAGA | + |
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Preference number: 4 (lower is better) Translates to: SCSLGVTTLSGFEIHQSRGSPSP*KLPGPR Trigger: TCTTGGTCCTGGTAGCTTTCAAGGCGATGGACTTCC...CCTACTTTGGTGGATTTCAAATCCAGACAGGGTAGTCACACCGAGGCTACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CCA 90 bp | TGTGTCCCTTTCATGAACATCCTGGGACCAGCCCATTCATTTTCCTACCCCTTAGACGTATGGTGGTCTTaGAGCCCACATCTCCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: CVPFMNILGPAHSFSYPLDVWWS*SPHLPR Trigger: ACGAGGGAGATGTGGGCTCCAAGACCACCATACGTC...TAAGGGGTAGGAAAATGAATGGGCTGGTCCCAGGATGTTCATGAAAGGGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR TCA 90 bp | AGGGCCTACTCAGATGGCAAAGTAGGGAACCAAGGTGTTACAGCTCCCATCCAATGGAATACCACACCATaGCAACAACAAGGACCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RAYSDGKVGNQGVTAPIQWNTTP*QQQGPE Trigger: CTCTGGTCCTTGTTGTTGTCATGGTGTGGTATTCCA...TTGGATGGGAGCTGTAACACCTTGGTTCCCTACTTTGCCATCTGAGTAGGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CCA 90 bp | GATTTGAAATCCACCAAAGTAGGCAGGGGCATAGCCTCTCTGGAGACCTGGACAGTTCATAGTAGTGGATaGTCTGCTTCTTGTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: DLKSTKVGRGIASLETWTVHSSG*SASCWR Trigger: CCTCCAACAAGAAGCAGACCATCCACTACTATGAAC...TGTCCAGGTCTCCAGAGAGGCTATGCCCCTGCCTACTTTGGTGGATTTCAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CCA 90 bp | CATAGTGAGTTCCAGATTAGCCAGGGTTTCACAGTCAGACCCTGTCTCAAGAACTCTTGGGAGACATTATaGCCTGATCCCGCCATAGAC | + |
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Preference number: 4 (lower is better) Translates to: HSEFQISQGFTVRPCLKNSWETL*PDPAID Trigger: GTCTATGGCGGGATCAGGCCATAATGTCTCCCAAGA...GTTCTTGAGACAGGGTCTGACTGTGAAACCCTGGCTAATCTGGAACTCACTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| 3UTR CAA 72 bp | AGAACACCCTCTCCATTGAGGGTGAGTTCAATTGGATaGTACTGGCACCAGGAACCTCTAAGCTGTAGACAG | + |
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Preference number: 4 (lower is better) Translates to: RTPSPLRVSSIG*YWHQEPLSCRQ Trigger: CTGTCTACAGCTTAGAGGTTCCTGGTGCCAGTACAATCCAATTGAACTCACCCTCAATGGAGAGGGTGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CCA 90 bp | TACATAGTGAGTTCCAGATTAGCCAGGGTTTCACAGTCAGACCCTGTCTCAAGAAGAAGAGACGTATGGTaGTCTTGGAGCCCACATCTC | + |
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Preference number: 4 (lower is better) Translates to: YIVSSRLARVSQSDPVSRRRDVW*SWSPHL Trigger: GAGATGTGGGCTCCAAGACCACCATACGTCTCTTCT...TCTTGAGACAGGGTCTGACTGTGAAACCCTGGCTAATCTGGAACTCACTATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CCA 90 bp | TCCTGTAGCCTCGGTGTGACTACCCTGTCTGGATTTGAAATCCACCAAAGTAGGATGGTCTCAATCCAGTaGAAGTCCATCGCCTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: SCSLGVTTLSGFEIHQSRMVSIQ*KSIALK Trigger: TTTCAAGGCGATGGACTTCCACTGGATTGAGACCAT...CCTACTTTGGTGGATTTCAAATCCAGACAGGGTAGTCACACCGAGGCTACAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CCA 90 bp | TGTGTCCCTTTCATGAACATCCTGGGACCAGCCCATTCATTTTCCTACCCCTTAATGGCGATAGCCTCTTaGGAGACATTATGGCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: CVPFMNILGPAHSFSYPLMAIAS*ETLWPD Trigger: ATCAGGCCATAATGTCTCCCAAGAGGCTATCGCCAT...TAAGGGGTAGGAAAATGAATGGGCTGGTCCCAGGATGTTCATGAAAGGGACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR GCA 90 bp | CATAGTGAGTTCCAGATTAGCCAGGGTTTCACAGTCAGACCCTGTCTCAAGAACGCTCAGGAGCTTGTCTaGTGCAATCTCCATAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: HSEFQISQGFTVRPCLKNAQELV*CNLHKE Trigger: TTCTTTATGGAGATTGCAGCAGACAAGCTCCTGAGC...GTTCTTGAGACAGGGTCTGACTGTGAAACCCTGGCTAATCTGGAACTCACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CCA 90 bp | CTGTATTGTGTCCCTTTCATGAACATCCTGGGACCAGCCCATTCATTTTCCTACGATAGAAGAGACGTATaGTGGTCTTGGAGCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: LYCVPFMNILGPAHSFSYDRRDV*WSWSPH Trigger: ATGTGGGCTCCAAGACCACCATACGTCTCTTCTATC...GTAGGAAAATGAATGGGCTGGTCCCAGGATGTTCATGAAAGGGACACAATACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CCA 90 bp | TTGTGTCCCTTTCATGAACATCCTGGGACCAGCCCATTCATTTTCCTACCCCTTGACCAAGAGCGTGTCTaGGTTGTTTTCTATTTTAGG | + |
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Preference number: 4 (lower is better) Translates to: LCPFHEHPGTSPFIFLPLDQERV*VVFYFR Trigger: CCTAAAATAGAAAACAACCCAGACACGCTCTTGGTC...AAGGGGTAGGAAAATGAATGGGCTGGTCCCAGGATGTTCATGAAAGGGACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CCA 90 bp | CTGTATTGTGTCCCTTTCATGAACATCCTGGGACCAGCCCATTCATTTTCCTACTCTTATCACTCAAGATaGTCTCAATCCAGTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LYCVPFMNILGPAHSFSYSYHSR*SQSSGS Trigger: ACTTCCACTGGATTGAGACCATCTTGAGTGATAAGA...GTAGGAAAATGAATGGGCTGGTCCCAGGATGTTCATGAAAGGGACACAATACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CAA 90 bp | TTGGGGCCAGGCGTAGTACATGCCTTTCATCCCAACACTTGGGAGGCAAAGGCAAGACGTATGGTGGTCTaGGAGCCCACATCTCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: LGPGVVHAFHPNTWEAKARRMVV*EPTSPS Trigger: CGAGGGAGATGTGGGCTCCAAGACCACCATACGTCT...TGCCTTTGCCTCCCAAGTGTTGGGATGAAAGGCATGTACTACGCCTGGCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS GCA 90 bp | AGGTGTAGAGCCAAGGTGATGGCTAGCAGACCCGTGGTTGGCTTCTaGTTGATCTTTCGAGGCTGTTGTATGGGCAGGCTCAGGAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: RCRAKVMASRPVVGF*LIFRGCCMGRLRSL Trigger: CAAGCTCCTGAGCCTGCCCATACAACAGCCTCGAAAGATCAAGCAGAAGCCAACCACGGGTCTGCTAGCCATCACCTTGGCTCTACACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CCA 90 bp | GGTCAAAGTGGGCCGACTCAGGATAGAAGAGACGTATGGTGGTCTTaGAGCCCACATCTCCCTCGTAGCCAGCCACAGGAGCATTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: GQSGPTQDRRDVWWS*SPHLPRSQPQEHCS Trigger: TGAACAATGCTCCTGTGGCTGGCTACGAGGGAGATGTGGGCTCCAAGACCACCATACGTCTCTTCTATCCTGAGTCGGCCCACTTTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034537.8 ENSMUST00000213526.2 |
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| CDS-3UTR CAA 90 bp | TCCTGTAGCCTCGGTGTGACTACCCTGTCTGGATTTGAAATCCACCAAAGTAGGGATCTTTCGAGGCTGTaGTATGGGCAGGCTCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: SCSLGVTTLSGFEIHQSRDLSRL*YGQAQE Trigger: CTCCTGAGCCTGCCCATACAACAGCCTCGAAAGATC...CCTACTTTGGTGGATTTCAAATCCAGACAGGGTAGTCACACCGAGGCTACAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS TCA 90 bp | AGAACTCAATGTACCTATCTTCTCGGGAGATGGAATACCACACCATaGCAACAACAAGGACCAGAGCCAGGGCCAGGAGCTTCCAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: RTQCTYLLGRWNTTP*QQQGPEPGPGASSE Trigger: CTCACTGGAAGCTCCTGGCCCTGGCTCTGGTCCTTGTTGTTGTCATGGTGTGGTATTCCATCTCCCGAGAAGATAGGTACATTGAGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000034537.8 ENSMUST00000213526.2 ENSMUST00000214526.2 ENSMUST00000215089.2 ENSMUST00000215463.2 ENSMUST00000215638.2 ENSMUST00000216557.2 ENSMUST00000217542.2 |
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| CDS CCA 90 bp | CCTTTTCGCACCCGCTTCTTATCACTCAAGATGGTCTCAATCCAGTaGAAGTCCATCGCCTTGAAAGCTACCAGGACCAAGAGCGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: PFRTRFLSLKMVSIQ*KSIALKATRTKSVS Trigger: AGACACGCTCTTGGTCCTGGTAGCTTTCAAGGCGATGGACTTCCACTGGATTGAGACCATCTTGAGTGATAAGAAGCGGGTGCGAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CCA 90 bp | TTGACAGCTCCCATCTCTAGCATCCGCTTGATGGCGATAGCCTCTTaGGAGACATTATGGCCTGATCCCGCCATAGACTTAAGTGTGATC | + |
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Preference number: 5 (lower is better) Translates to: LTAPISSIRLMAIAS*ETLWPDPAIDLSVI Trigger: GATCACACTTAAGTCTATGGCGGGATCAGGCCATAATGTCTCCCAAGAGGCTATCGCCATCAAGCGGATGCTAGAGATGGGAGCTGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CCA 90 bp | GTGGAAGTCCATCGCCTTGAAAGCTACCAGGACCAAGAGCGTGTCTaGGTTGTTTTCTATTTTAGGGTCAAAGTGGGCCGACTCAGGATA | + |
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Preference number: 5 (lower is better) Translates to: VEVHRLESYQDQERV*VVFYFRVKVGRLRI Trigger: TATCCTGAGTCGGCCCACTTTGACCCTAAAATAGAAAACAACCCAGACACGCTCTTGGTCCTGGTAGCTTTCAAGGCGATGGACTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CAA 90 bp | AGAACACCCTCTCCATTGAGGGTGAGTTCAATTGGATTGTACTGGCACCAGGAATGGAAGTCCATCGCCTaGAAAGCTACCAGGACCAAG | + |
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Preference number: 5 (lower is better) Translates to: RTPSPLRVSSIGLYWHQEWKSIA*KATRTK Trigger: CTTGGTCCTGGTAGCTTTCAAGGCGATGGACTTCCA...TTCCTGGTGCCAGTACAATCCAATTGAACTCACCCTCAATGGAGAGGGTGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CAA 90 bp | AGAACACCCTCTCCATTGAGGGTGAGTTCAATTGGATTGTACTGGCACCAGGAAAGAATCCGGACCTGTTaGGGGTTGACATCCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: RTPSPLRVSSIGLYWHQERIRTC*GLTSQM Trigger: CATCTGGGATGTCAACCCCAAACAGGTCCGGATTCT...TTCCTGGTGCCAGTACAATCCAATTGAACTCACCCTCAATGGAGAGGGTGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CAA 90 bp | CTGTATTGTGTCCCTTTCATGAACATCCTGGGACCAGCCCATTCATTTTCCTACGGCAGGCTCAGGAGCTaGTCTGCTGCAATCTCCATA | + |
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Preference number: 5 (lower is better) Translates to: LYCVPFMNILGPAHSFSYGRLRS*SAAISI Trigger: TATGGAGATTGCAGCAGACAAGCTCCTGAGCCTGCC...GTAGGAAAATGAATGGGCTGGTCCCAGGATGTTCATGAAAGGGACACAATACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CAA 90 bp | GTATTGTGTCCCTTTCATGAACATCCTGGGACCAGCCCATTCATTTTCCTACCCGTGGTTGGCTTCTGCTaGATCTTTCGAGGCTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: VLCPFHEHPGTSPFIFLPVVGFC*IFRGCC Trigger: ACAACAGCCTCGAAAGATCAAGCAGAAGCCAACCAC...GGGTAGGAAAATGAATGGGCTGGTCCCAGGATGTTCATGAAAGGGACACAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CAA 90 bp | GATTTGAAATCCACCAAAGTAGGCAGGGGCATAGCCTCTCTGGAGACCTGGACAAAGAGCGTGTCTGGGTaGTTTTCTATTTTAGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: DLKSTKVGRGIASLETWTKSVSG*FSILGS Trigger: TGACCCTAAAATAGAAAACAACCCAGACACGCTCTT...TGTCCAGGTCTCCAGAGAGGCTATGCCCCTGCCTACTTTGGTGGATTTCAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS-3UTR CAA 90 bp | AGAACACCCTCTCCATTGAGGGTGAGTTCAATTGGATTGTACTGGCACCAGGAAAAGTATGTGAGGTTCTaGACAGCTCCCATCTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: RTPSPLRVSSIGLYWHQEKYVRF*TAPISS Trigger: GCTAGAGATGGGAGCTGTCAAGAACCTCACATACTT...TTCCTGGTGCCAGTACAATCCAATTGAACTCACCCTCAATGGAGAGGGTGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS TCA 90 bp | TCTTATCACTCAAGATGGTCTCAATCCAGTGGAAGTCCATCGCCTTaGAAGCTACCAGGACCAAGAGCGTGTCTGGGTTGTTTTCTATTT | + |
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Preference number: 5 (lower is better) Translates to: SYHSRWSQSSGSPSP*KLPGPRACLGCFLF Trigger: AAATAGAAAACAACCCAGACACGCTCTTGGTCCTGGTAGCTTTCAAGGCGATGGACTTCCACTGGATTGAGACCATCTTGAGTGATAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS GCA 72 bp | TCATCCCGGCTGCCTCGGGCCACAGTTTCTGAGGTCTaGTGGGCCCCGGAGGCCAGTGCACTCTCTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSRLPRATVSEV*WAPEASALSSS Trigger: GGAGGAAGAGAGTGCACTGGCCTCCGGGGCCCAGCAGACCTCAGAAACTGTGGCCCGAGGCAGCCGGGATGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216557.2 |
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| CDS CCA 72 bp | GGAGAAGTGTCATCCCGGCTGCCTCGGGCCACCTGCTaGCCCAGACTCTCCGGCACACTGGTGAGGTACAGC | + |
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Preference number: 6 (lower is better) Translates to: GEVSSRLPRATC*PRLSGTLVRYS Trigger: GCTGTACCTCACCAGTGTGCCGGAGAGTCTGGGCCAGCAGGTGGCCCGAGGCAGCCGGGATGACACTTCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214526.2 |
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| CDS TCA 72 bp | AGAAGTGTCATCCCGGCTGCCTCGGGCCACAGTTTCTaGGGTCTGCTGGGCCCCGGAGGCCAGTGCACTCTC | + |
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Preference number: 6 (lower is better) Translates to: RSVIPAASGHSF*GLLGPGGQCTL Trigger: GAGAGTGCACTGGCCTCCGGGGCCCAGCAGACCTCAGAAACTGTGGCCCGAGGCAGCCGGGATGACACTTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216557.2 |
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| CDS GCA 72 bp | TTGATGACACCGCCCAGCGAGCTGTTCCGCAACCGGTaGCCATTTCCCACCACAACACAGCGACGACACTCG | + |
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Preference number: 6 (lower is better) Translates to: LMTPPSELFRNR*PFPTTTQRRHS Trigger: CGAGTGTCGTCGCTGTGTTGTGGTGGGAAATGGGCACCGGTTGCGGAACAGCTCGCTGGGCGGTGTCATCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034537.8 ENSMUST00000213526.2 ENSMUST00000216557.2 |
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| CDS CCA 72 bp | GGGCCGACTCAGGATAGAAGAGACGTATGGTGGTCTTaGAGCCCACATCTCCCTCGTAGCCAGCCACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GPTQDRRDVWWS*SPHLPRSQPQE Trigger: CTCCTGTGGCTGGCTACGAGGGAGATGTGGGCTCCAAGACCACCATACGTCTCTTCTATCCTGAGTCGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034537.8 ENSMUST00000213526.2 |
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| CDS CCA 72 bp | CAAAGTGGGCCGACTCAGGATAGAAGAGACGTATGGTaGTCTTGGAGCCCACATCTCCCTCGTAGCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: QSGPTQDRRDVW*SWSPHLPRSQP Trigger: TGGCTGGCTACGAGGGAGATGTGGGCTCCAAGACCACCATACGTCTCTTCTATCCTGAGTCGGCCCACTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034537.8 ENSMUST00000213526.2 |
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| CDS CCA 72 bp | GGTCAAAGTGGGCCGACTCAGGATAGAAGAGACGTATaGTGGTCTTGGAGCCCACATCTCCCTCGTAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GQSGPTQDRRDV*WSWSPHLPRSQ Trigger: CTGGCTACGAGGGAGATGTGGGCTCCAAGACCACCATACGTCTCTTCTATCCTGAGTCGGCCCACTTTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034537.8 ENSMUST00000213526.2 |
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| CDS CCA 72 bp | CCAGAGCCAGGGCCAGGAGCTTCCAGTGAGATTTGCTaGTCATGTTTCTCAGCAGATAGCAGGGTTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PEPGPGASSEIC*SCFSADSRVPG Trigger: CCCAGGAACCCTGCTATCTGCTGAGAAACATGACCAGCAAATCTCACTGGAAGCTCCTGGCCCTGGCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000213526.2 ENSMUST00000214526.2 ENSMUST00000215089.2 ENSMUST00000215638.2 ENSMUST00000216557.2 ENSMUST00000217542.2 |
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| CDS CAA 72 bp | GGAGCATTGTTCAATCTGATGACCACGTCGTACTTGTaGATGACACCGCCCAGCGAGCTGTTCCGCAACCGG | + |
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Preference number: 6 (lower is better) Translates to: GALFNLMTTSYL*MTPPSELFRNR Trigger: CCGGTTGCGGAACAGCTCGCTGGGCGGTGTCATCAACAAGTACGACGTGGTCATCAGATTGAACAATGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034537.8 ENSMUST00000213526.2 |
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| CDS CAA 72 bp | AAGGTGATGGCTAGCAGACCCGTGGTTGGCTTCTGCTaGATCTTTCGAGGCTGTTGTATGGGCAGGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: KVMASRPVVGFC*IFRGCCMGRLR Trigger: CCTGAGCCTGCCCATACAACAGCCTCGAAAGATCAAGCAGAAGCCAACCACGGGTCTGCTAGCCATCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CAA 90 bp | TGTAGAGCCAAGGTGATGGCTAGCAGACCCGTGGTTGGCTTCTGCTaGATCTTTCGAGGCTGTTGTATGGGCAGGCTCAGGAGCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: CRAKVMASRPVVGFC*IFRGCCMGRLRSLS Trigger: AGACAAGCTCCTGAGCCTGCCCATACAACAGCCTCGAAAGATCAAGCAGAAGCCAACCACGGGTCTGCTAGCCATCACCTTGGCTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CAA 72 bp | ACCCGTGGTTGGCTTCTGCTTGATCTTTCGAGGCTGTaGTATGGGCAGGCTCAGGAGCTTGTCTGCTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: TRGWLLLDLSRL*YGQAQELVCCN Trigger: ATTGCAGCAGACAAGCTCCTGAGCCTGCCCATACAACAGCCTCGAAAGATCAAGCAGAAGCCAACCACGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CAA 90 bp | CAGAAGTATGTGAGGTTCTTGACAGCTCCCATCTCTAGCATCCGCTaGATGGCGATAGCCTCTTGGGAGACATTATGGCCTGATCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: QKYVRFLTAPISSIR*MAIASWETLWPDPA Trigger: GGCGGGATCAGGCCATAATGTCTCCCAAGAGGCTATCGCCATCAAGCGGATGCTAGAGATGGGAGCTGTCAAGAACCTCACATACTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CCA 72 bp | CCCATCTCTAGCATCCGCTTGATGGCGATAGCCTCTTaGGAGACATTATGGCCTGATCCCGCCATAGACTTA | + |
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Preference number: 6 (lower is better) Translates to: PISSIRLMAIAS*ETLWPDPAIDL Trigger: TAAGTCTATGGCGGGATCAGGCCATAATGTCTCCCAAGAGGCTATCGCCATCAAGCGGATGCTAGAGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CAA 72 bp | ACAGGAGCATTGTTCAATCTGATGACCACGTCGTACTaGTTGATGACACCGCCCAGCGAGCTGTTCCGCAAC | + |
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Preference number: 6 (lower is better) Translates to: TGALFNLMTTSY*LMTPPSELFRN Trigger: GTTGCGGAACAGCTCGCTGGGCGGTGTCATCAACAAGTACGACGTGGTCATCAGATTGAACAATGCTCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034537.8 ENSMUST00000213526.2 |
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| CDS CAA 72 bp | CTCAAGATGGTCTCAATCCAGTGGAAGTCCATCGCCTaGAAAGCTACCAGGACCAAGAGCGTGTCTGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LKMVSIQWKSIA*KATRTKSVSGL Trigger: CAACCCAGACACGCTCTTGGTCCTGGTAGCTTTCAAGGCGATGGACTTCCACTGGATTGAGACCATCTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CAA 72 bp | GTGAGGTTCTTGACAGCTCCCATCTCTAGCATCCGCTaGATGGCGATAGCCTCTTGGGAGACATTATGGCCT | + |
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Preference number: 6 (lower is better) Translates to: VRFLTAPISSIR*MAIASWETLWP Trigger: AGGCCATAATGTCTCCCAAGAGGCTATCGCCATCAAGCGGATGCTAGAGATGGGAGCTGTCAAGAACCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS TCA 72 bp | TCAAGATGGTCTCAATCCAGTGGAAGTCCATCGCCTTaGAAGCTACCAGGACCAAGAGCGTGTCTGGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SRWSQSSGSPSP*KLPGPRACLGC Trigger: ACAACCCAGACACGCTCTTGGTCCTGGTAGCTTTCAAGGCGATGGACTTCCACTGGATTGAGACCATCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CAA 90 bp | TTCTGCTTGATCTTTCGAGGCTGTTGTATGGGCAGGCTCAGGAGCTaGTCTGCTGCAATCTCCATAAAGAAGGGGTTTAGAATCCGGACC | + |
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Preference number: 6 (lower is better) Translates to: FCLIFRGCCMGRLRS*SAAISIKKGFRIRT Trigger: GGTCCGGATTCTAAACCCCTTCTTTATGGAGATTGCAGCAGACAAGCTCCTGAGCCTGCCCATACAACAGCCTCGAAAGATCAAGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CCA 72 bp | ACCCGCTTCTTATCACTCAAGATGGTCTCAATCCAGTaGAAGTCCATCGCCTTGAAAGCTACCAGGACCAAG | + |
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Preference number: 6 (lower is better) Translates to: TRFLSLKMVSIQ*KSIALKATRTK Trigger: CTTGGTCCTGGTAGCTTTCAAGGCGATGGACTTCCACTGGATTGAGACCATCTTGAGTGATAAGAAGCGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CCA 72 bp | ATCCGCTTGATGGCGATAGCCTCTTGGGAGACATTATaGCCTGATCCCGCCATAGACTTAAGTGTGATCTGT | + |
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Preference number: 6 (lower is better) Translates to: IRLMAIASWETL*PDPAIDLSVIC Trigger: ACAGATCACACTTAAGTCTATGGCGGGATCAGGCCATAATGTCTCCCAAGAGGCTATCGCCATCAAGCGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CAA 72 bp | GCCTTGAAAGCTACCAGGACCAAGAGCGTGTCTGGGTaGTTTTCTATTTTAGGGTCAAAGTGGGCCGACTCA | + |
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Preference number: 6 (lower is better) Translates to: ALKATRTKSVSG*FSILGSKWADS Trigger: TGAGTCGGCCCACTTTGACCCTAAAATAGAAAACAACCCAGACACGCTCTTGGTCCTGGTAGCTTTCAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CAA 72 bp | TTAAGCTGCAGAAAGATGGGCTGTTCCCTAGAACGGTaGCCAAAAATCTTAGAGGCCTGTCTCTCTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LSCRKMGCSLER*PKILEACLSAS Trigger: TGAGGCAGAGAGACAGGCCTCTAAGATTTTTGGCAACCGTTCTAGGGAACAGCCCATCTTTCTGCAGCTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000034537.8 ENSMUST00000213526.2 ENSMUST00000214526.2 ENSMUST00000215089.2 ENSMUST00000215638.2 ENSMUST00000216557.2 ENSMUST00000217149.2 ENSMUST00000217542.2 |
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| CDS TCA 72 bp | CTTGATGGCGATAGCCTCTTGGGAGACATTATGGCCTaGTCCCGCCATAGACTTAAGTGTGATCTGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: LDGDSLLGDIMA*SRHRLKCDLFI Trigger: TATGAACAGATCACACTTAAGTCTATGGCGGGATCAGGCCATAATGTCTCCCAAGAGGCTATCGCCATCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CAA 90 bp | TTCTTATCACTCAAGATGGTCTCAATCCAGTGGAAGTCCATCGCCTaGAAAGCTACCAGGACCAAGAGCGTGTCTGGGTTGTTTTCTATT | + |
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Preference number: 6 (lower is better) Translates to: FLSLKMVSIQWKSIA*KATRTKSVSGLFSI Trigger: AATAGAAAACAACCCAGACACGCTCTTGGTCCTGGTAGCTTTCAAGGCGATGGACTTCCACTGGATTGAGACCATCTTGAGTGATAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034537.8 |
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| CDS CCA 72 bp | ACTTCCTTTAGTCCCAAAGGGCAGCTCATAGGTGGATaGCGTCTTTACCCAAAAATAATCCTTAAGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: TSFSPKGQLIGG*RLYPKIILKLQ Trigger: CTGCAGCTTAAGGATTATTTTTGGGTAAAGACGCCATCCACCTATGAGCTGCCCTTTGGGACTAAAGGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000034537.8 ENSMUST00000213526.2 ENSMUST00000214526.2 ENSMUST00000215089.2 ENSMUST00000216557.2 ENSMUST00000217149.2 |
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