Pregenerated sensors for ST14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031995Ensembl transcript IDs: ENSMUST00000034478.3, ENSMUST00000123557.2, ENSMUST00000214418.2
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCACCCAGCTCAGGGCTAGAGGGGGAAGGCTGCCATCAAACCCTTaGCCCCAGGCTGGGCCGCTAGCACGCAAGTTCTCTCTCCAACTC | + |
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Preference number: 1 (lower is better) Translates to: FTQLRARGGRLPSNP*PQAGPLARKFSLQL Trigger: GAGTTGGAGAGAGAACTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCCTCTAGCCCTGAGCTGGGTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| 3UTR GCA 90 bp | CAGCAAGCCAGCCATGAGGGAGAGCAAGAGGAAGCTGAACAGCACTaGCACCAGCACCACCCAGCGCCTGGGGCCTCGCTTCTCCACTTT | + |
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Preference number: 1 (lower is better) Translates to: QQASHEGEQEEAEQH*HQHHPAPGASLLHF Trigger: AAAGTGGAGAAGCGAGGCCCCAGGCGCTGGGTGGTGCTGGTGGCAGTGCTGTTCAGCTTCCTCTTGCTCTCCCTCATGGCTGGCTTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
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| 3UTR CCA 90 bp | AGGACAGGGACTTCATTGTACAGCAGCTTCAGCGCCTCCTTCACCTaGCTGGCCAGGCTGATAAACTCTGTGGAGGTGGAGTTCTCATAC | + |
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Preference number: 1 (lower is better) Translates to: RTGTSLYSSFSASFT*LARLINSVEVEFSY Trigger: GTATGAGAACTCCACCTCCACAGAGTTTATCAGCCTGGCCAGCCAGGTGAAGGAGGCGCTGAAGCTGCTGTACAATGAAGTCCCTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123557.2 ENSMUST00000214418.2 |
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| 3UTR TCA 90 bp | ACTCCACACCCTCCTCAAAGCCATTCATGTTCTCTGTGGGAGCCATaGGGGACCAGCAGAATCAGTCTTGGGAAGGAGACAGACAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: TPHPPQSHSCSLWEP*GTSRISLGKETDKS Trigger: TGACTTGTCTGTCTCCTTCCCAAGACTGATTCTGCTGGTCCCTCATGGCTCCCACAGAGAACATGAATGGCTTTGAGGAGGGTGTGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
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| 3UTR CCA 90 bp | TTCATGTTCTCTGTGGGAGCCATGAGGGACCAGCAGAATCAGTCTTaGGAAGGAGACAGACAAGTCACAACTCAAAAGCTGTGGTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: FMFSVGAMRDQQNQS*EGDRQVTTQKLWWW Trigger: CCACCACCACAGCTTTTGAGTTGTGACTTGTCTGTCTCCTTCCCAAGACTGATTCTGCTGGTCCCTCATGGCTCCCACAGAGAACATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
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| 3UTR-3UTR TCA 90 bp | GGCATGCGCCGGGTAGGGACTGTTGGGGAAGCCAGGGGTAGTGAAGCGTGTCACCCAGCAAGCCAGCCATaGGGGAGAGCAAGAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: GMRRVGTVGEARGSEACHPASQP*GRARGS Trigger: GCTTCCTCTTGCTCTCCCTCATGGCTGGCTTGCTGG...GTGACACGCTTCACTACCCCTGGCTTCCCCAACAGTCCCTACCCGGCGCATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAACCCTGTGGGTGTTTGTaGTCGGCTGTCTGTCCATGC | + |
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Preference number: 2 (lower is better) Translates to: RGKAAIKPLPPGWAASTQPCGCL*SAVCPC Trigger: GCATGGACAGACAGCCGACCACAAACACCCACAGGG...TTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| 3UTR-3UTR TCA 90 bp | GCGGGCATGCGCCGGGTAGGGACTGTTGGGGAAGCCAGGGGTAGTGAAGCGTGTGGGGATGCTGAACTCTaGCCAGTAGTAGGCGATGAC | + |
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Preference number: 2 (lower is better) Translates to: AGMRRVGTVGEARGSEACGDAEL*PVVGDD Trigger: GTCATCGCCTACTACTGGTCAGAGTTCAGCATCCCC...ACACGCTTCACTACCCCTGGCTTCCCCAACAGTCCCTACCCGGCGCATGCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000123557.2 ENSMUST00000214418.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACTGTTGGGGAAGCCAGGGGTAGTGAAGCGTGTCACTGCTGCACCATGGGCCAAAAGCTGTGGTGGTaGTGCCCCTGGGACTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GTVGEARGSEACHCCTMGQKLWW*CPWDSA Trigger: GGCTGAGTCCCAGGGGCACCACCACCACAGCTTTTG...GCCCATGGTGCAGCAGTGACACGCTTCACTACCCCTGGCTTCCCCAACAGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
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| 3UTR-3UTR GCA 90 bp | GCGTGTCACTGCTGCACCATGGGCATGCAGGGCAAAACTGCAGCTGTTGTCCTGAAGCTGTGGTGGTGGTaGCCCTGGGACTCAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: ACHCCTMGMQGKTAAVVLKLWWW*PWDSAR Trigger: TCTGGCTGAGTCCCAGGGGCACCACCACCACAGCTT...CAGGACAACAGCTGCAGTTTTGCCCTGCATGCCCATGGTGCAGCAGTGACACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
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| 3UTR-3UTR GCA 90 bp | TCACTGCTGCACCATGGGCATGCAGGGCAAAACTGCAGCTGTTGTCCTGAGTCCGAAGCTGAACAGCACTaGCACCAGCACCACCCAGCG | + |
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Preference number: 2 (lower is better) Translates to: SLLHHGHAGQNCSCCPESEAEQH*HQHHPA Trigger: CGCTGGGTGGTGCTGGTGGCAGTGCTGTTCAGCTTC...GGACTCAGGACAACAGCTGCAGTTTTGCCCTGCATGCCCATGGTGCAGCAGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGATCTCATTTGTGATCCTCAGATGGCCATTGAAGACTTTTTGAACCCGCACAGAGCAAGAGGAAGCTaGACAGCACTGCCACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: KDLICDPQMAIEDFLNPHRARGS*TALPPA Trigger: TGCTGGTGGCAGTGCTGTTCAGCTTCCTCTTGCTCT...GTGCGGGTTCAAAAAGTCTTCAATGGCCATCTGAGGATCACAAATGAGATCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
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| 3UTR CAA 90 bp | CAGAAAGATCTCATTTGTGATCCTCAGATGGCCATTGAAGACTTTTaGAACCCGCACATTCCGATAATGGAAGTGCCACACCAGCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: QKDLICDPQMAIEDF*NPHIPIMEVPHQQA Trigger: GGCTTGCTGGTGTGGCACTTCCATTATCGGAATGTGCGGGTTCAAAAAGTCTTCAATGGCCATCTGAGGATCACAAATGAGATCTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
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| 3UTR GCA 72 bp | CTCAGGGCTAGAGGGGGAAGGCTGCCATCAAACCCTTaGCCCCAGGCTGGGCCGCTAGCACGCAAGTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LRARGGRLPSNP*PQAGPLARKFS Trigger: AGAGAACTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCCTCTAGCCCTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| 3UTR-3UTR CAA 90 bp | GGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGTTCTCTCTCCAACTCTaGAGGGGGTCCCACTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: GGRLPSNPCPQAGPLARKFSLQL*RGSHFG Trigger: TCCAAAGTGGGACCCCCTCAAGAGTTGGAGAGAGAA...CTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| 3UTR CCA 72 bp | CCACCCAGCGCCTGGGGCCTCGCTTCTCCACTTTCTTaGCATTGTTCGCAGGCAGGAACTCCACACCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: PPSAWGLASPLS*HCSQAGTPHPP Trigger: AGGAGGGTGTGGAGTTCCTGCCTGCGAACAATGCCAAGAAAGTGGAGAAGCGAGGCCCCAGGCGCTGGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
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| 3UTR-3UTR CAA 90 bp | GGCATGCGCCGGGTAGGGACTGTTGGGGAAGCCAGGGGTAGTGAAGCGTGTCACCGCTTCTCCACTTTCTaGGCATTGTTCGCAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GMRRVGTVGEARGSEACHRFSTF*ALFAGR Trigger: CCTGCCTGCGAACAATGCCAAGAAAGTGGAGAAGCG...GTGACACGCTTCACTACCCCTGGCTTCCCCAACAGTCCCTACCCGGCGCATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
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| 3UTR CCA 72 bp | ACTTCATTGTACAGCAGCTTCAGCGCCTCCTTCACCTaGCTGGCCAGGCTGATAAACTCTGTGGAGGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: TSLYSSFSASFT*LARLINSVEVE Trigger: CTCCACCTCCACAGAGTTTATCAGCCTGGCCAGCCAGGTGAAGGAGGCGCTGAAGCTGCTGTACAATGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123557.2 ENSMUST00000214418.2 |
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| 3UTR TCA 72 bp | CCTCCTCAAAGCCATTCATGTTCTCTGTGGGAGCCATaGGGGACCAGCAGAATCAGTCTTGGGAAGGAGACA | + |
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Preference number: 3 (lower is better) Translates to: PPQSHSCSLWEP*GTSRISLGKET Trigger: TGTCTCCTTCCCAAGACTGATTCTGCTGGTCCCTCATGGCTCCCACAGAGAACATGAATGGCTTTGAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
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| 3UTR-3UTR CAA 90 bp | GTAGTAGGCGATGACACTGCCCTCACTGAAGGCAGTTACAGCCGACTTCTTGTGCCAGCAGAATCAGTCTaGGGAAGGAGACAGACAAGT | + |
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Preference number: 3 (lower is better) Translates to: VVGDDTALTEGSYSRLLVPAESV*GRRQTS Trigger: ACTTGTCTGTCTCCTTCCCAAGACTGATTCTGCTGG...CACAAGAAGTCGGCTGTAACTGCCTTCAGTGAGGGCAGTGTCATCGCCTACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
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| CDS-3UTR CCA 90 bp | GGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGCCCTGGCCCAGGGCGTaGAGGCTCACCTGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GGRLPSNPCPQAGPLARKPWPRA*RLTCQG Trigger: GCCCTGGCAGGTGAGCCTCCACGCCCTGGGCCAGGG...CTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR TCA 90 bp | GGGACTGTTGGGGAAGCCAGGGGTAGTGAAGCGTGTCACTGCTGCACCATGGGCCCCGCGCCGAAGTCCTaGGAGCCCCCTCCGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTVGEARGSEACHCCTMGPAPKS*EPPPAL Trigger: CAAGGCCGGAGGGGGCTCTCAGGACTTCGGCGCGGG...GCCCATGGTGCAGCAGTGACACGCTTCACTACCCCTGGCTTCCCCAACAGTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000123557.2 ENSMUST00000214418.2 |
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| CDS-3UTR TCA 90 bp | GGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGTGTGCCCCCAGCCTGTaGCCCAGATGGCCTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GGRLPSNPCPQAGPLARKCAPSL*PRWPCQ Trigger: CTGGCAAGGCCATCTGGGTCACAGGCTGGGGGCACA...CTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR TCA 90 bp | GGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGCCTGGCTTGTTCCTCTaGGCGCAGCCTTCACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GGRLPSNPCPQAGPLARKPGLFL*AQPSPQ Trigger: CTGGGGTGAAGGCTGCGCTCAGAGGAACAAGCCAGG...CTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR TCA 90 bp | TCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGTCGGCTGCCCGCGCCGAAGTCCTaGGAGCCCCCTCCGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SCIQVCMSGIPVGVCGRLPAPKS*EPPPAL Trigger: CAAGGCCGGAGGGGGCTCTCAGGACTTCGGCGCGGG...CAGCCGACCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR GCA 90 bp | CTCAGGGCTAGAGGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGTTGAGCTTCAGCTCCTaGACCCCAGAGGCACTGCGC | + |
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Preference number: 4 (lower is better) Translates to: LRARGGRLPSNPCPQAGPLSFSS*TPEALR Trigger: GCGCAGTGCCTCTGGGGTGCAGGAGCTGAAGCTCAA...CGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCCTCTAGCCCTGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR TCA 90 bp | GGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGCAAAGCTTCGGAAGGTaGGGCTCAGCACAGAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: GGRLPSNPCPQAGPLARKQSFGR*GSAQSR Trigger: CCGACTCTGTGCTGAGCCTCACCTTCCGAAGCTTTG...CTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR GCA 90 bp | GGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGTTGCACCCCAGAGGCACTaGGCTTGCTCTGGTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GKAAIKPLPPGWAASTQVAPQRH*ACSGPA Trigger: TGCTGGACCAGAGCAAGCGCAGTGCCTCTGGGGTGC...AACTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR CCA 90 bp | GGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGAGCGCCTCCTTCACCTaGCTGGCCAGGCTGATAAAC | + |
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Preference number: 4 (lower is better) Translates to: GGRLPSNPCPQAGPLARKSASFT*LARLIN Trigger: GTTTATCAGCCTGGCCAGCCAGGTGAAGGAGGCGCT...CTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR TCA 90 bp | AACTGCAGCTGTTGTCCTGAGTCCTCTGCAGCATTCTGGGGTCAATGGGGAAGGCCCGCGCCGAAGTCCTaGGAGCCCCCTCCGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: NCSCCPESSAAFWGQWGRPAPKS*EPPPAL Trigger: CAAGGCCGGAGGGGGCTCTCAGGACTTCGGCGCGGG...CCTTCCCCATTGACCCCAGAATGCTGCAGAGGACTCAGGACAACAGCTGCAGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000123557.2 ENSMUST00000214418.2 |
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| CDS-3UTR TCA 90 bp | GGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGAGAGCAAGAGGAAGCTaGACAGCACTGCCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GGRLPSNPCPQAGPLARKRARGS*TALPPA Trigger: TGCTGGTGGCAGTGCTGTTCAGCTTCCTCTTGCTCT...CTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR GCA 90 bp | TTGCCCCCAGGCTGGGCCGCTAGCACGCAAGTTCTCTCTCCAACTCTTGAGGGGATAATCCGGGCAGTCTaGCCAGCCGTCGCAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: LPPGWAASTQVLSPTLEGIIRAV*PAVAAQ Trigger: CTGCGCTGCGACGGCTGGGCAGACTGCCCGGATTAT...CCCCTCAAGAGTTGGAGAGAGAACTTGCGTGCTAGCGGCCCAGCCTGGGGGCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR CCA 90 bp | TCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGTCGGCTGCCACACAAGTGGCCCTaGCCCAGGGCGTGGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SCIQVCMSGIPVGVCGRLPHKWP*PRAWRL Trigger: GAGCCTCCACGCCCTGGGCCAGGGCCACTTGTGTGG...CAGCCGACCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR TCA 90 bp | CTCAGGGCTAGAGGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGTATTCCATGTGCAGTTaGTGTTGGGCGGGTAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LRARGGRLPSNPCPQAGPYSMCS*CWAGSG Trigger: GCCACTACCCGCCCAACATCAACTGCACATGGAATA...CGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCCTCTAGCCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR GCA 90 bp | CCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGTTCTCTCTCCAACTCTTGAGGAAGCGTGTCACTGCTaGACCATGGGCATGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PLPPGWAASTQVLSPTLEEACHC*TMGMQG Trigger: GCCCTGCATGCCCATGGTGCAGCAGTGACACGCTTC...CTCAAGAGTTGGAGAGAGAACTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR GCA 90 bp | AGGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAACCAGGTCACTGCCATaGTCATCACAGGGAGCGACA | + |
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Preference number: 4 (lower is better) Translates to: RGKAAIKPLPPGWAASTQTRSLP*SSQGAT Trigger: TGTCGCTCCCTGTGATGAGCATGGCAGTGACCTGGT...TTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR GCA 90 bp | CTCAGGGCTAGAGGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCCCAGAAGAGGGGCTTaGAGAACTGGTTTTTGCACG | + |
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Preference number: 4 (lower is better) Translates to: LRARGGRLPSNPCPQAGPPRRGA*RTGFCT Trigger: CGTGCAAAAACCAGTTCTGCAAGCCCCTCTTCTGGG...CGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCCTCTAGCCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR GCA 90 bp | GGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGCTGAAAGCAATGAGCTaGAGAGACCAGCCAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GGRLPSNPCPQAGPLARKLKAMS*RDQPVR Trigger: CCTGACTGGCTGGTCTCTGCAGCTCATTGCTTTCAG...CTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGGAGGCCCCACACAAGTaGCCCTGGCCCAGGGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: GGGHSINVVSVPLLYPGVEAPHK*PWPRAW Trigger: CCACGCCCTGGGCCAGGGCCACTTGTGTGGGGCCTC...CACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR CCA 90 bp | CTCAGGGCTAGAGGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTCACCACACCAGCCTaGAACATTCGCCCATCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LRARGGRLPSNPCPQAGPLTTPA*NIRPSF Trigger: GAAAGATGGGCGAATGTTCCAGGCTGGTGTGGTGAG...CGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCCTCTAGCCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR TCA 90 bp | TCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGTCGGCTGCAGGTTGTAGGAGGGTaGGAAGGTGCCACACAGCCG | + |
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Preference number: 4 (lower is better) Translates to: SCIQVCMSGIPVGVCGRLQVVGG*EGATQP Trigger: CGGCTGTGTGGCACCTTCTCACCCTCCTACAACCTG...CAGCCGACCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR TCA 90 bp | CCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGTTCTCTCTCCAACTCTTGAGCCCCAGTGTGCTCTTTaGTCCAGTCCCGAACTACAG | + |
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Preference number: 4 (lower is better) Translates to: PLPPGWAASTQVLSPTLEPQCAL*SSPELQ Trigger: CTGTAGTTCGGGACTGGATCAAAGAGCACACTGGGG...CTCAAGAGTTGGAGAGAGAACTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR CCA 90 bp | GTTCCTCTCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGCATCAGGCAGGCAGATaGGGCGCACGACGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VPLLYPGVHVGHPCGCLWHQAGR*GARRCC Trigger: ACAGCACCGTCGTGCGCCCCATCTGCCTGCCTGATG...CCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGAGAGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGGCCGGGAGTTGTACTTaGGTCCCGCGCCGAAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GGGHSINVVSVPLLYPGVAGSCT*VPRRSP Trigger: AGGACTTCGGCGCGGGACTCAAGTACAACTCCCGGC...CACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGCCAGCAAGCCAGCCATaGGGGAGAGCAAGAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GGGHSINVVSVPLLYPGVPASQP*GRARGS Trigger: GCTTCCTCTTGCTCTCCCTCATGGCTGGCTTGCTGG...CACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR TCA 90 bp | CCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGTTCTCTCTCCAACTCTTGAGCCAGATAGAAGAGTTTaGAGCGCACCTTCACGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PLPPGWAASTQVLSPTLEPDRRV*SAPSRS Trigger: GGAACGTGAAGGTGCGCTTCAAACTCTTCTATCTGG...CTCAAGAGTTGGAGAGAGAACTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS-3UTR GCA 90 bp | GGGGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGCCTCCCTCTTTTGTGTaGCCCCAGCCTGTGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGGHSINVVSVPLLYPGVPPSFV*PQPVTQ Trigger: CTGGGTCACAGGCTGGGGGCACACAAAAGAGGGAGG...CACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CCA 90 bp | GTTCCTCTCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGGGGCGGGTAGTGGCCTaGATAGTAGGGGCTGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VPLLYPGVHVGHPCGCLWGRVVA*IVGAAK Trigger: TTTAGCAGCCCCTACTATCCAGGCCACTACCCGCCC...CCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGAGAGGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR TCA 90 bp | GTTCCTCTCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGGGGGATGCTGAACTCTaGCCAGTAGTAGGCGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VPLLYPGVHVGHPCGCLWGDAEL*PVVGDD Trigger: GTCATCGCCTACTACTGGTCAGAGTTCAGCATCCCC...CCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGAGAGGAAC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR TCA 90 bp | GGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGCCACATCGTGTAGTCTaGGTACTTGAAATTTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGRLPSNPCPQAGPLARKPHRVV*VLEIFV Trigger: GACAAAAATTTCAAGTACTCAGACTACACGATGTGG...CTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR GCA 90 bp | TCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGTCGGCTGCATGCAGGGCAAAACTaGAGCTGTTGTCCTGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCIQVCMSGIPVGVCGRLHAGQN*SCCPES Trigger: GGACTCAGGACAACAGCTGCAGTTTTGCCCTGCATG...CAGCCGACCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTCTCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGCGGATCTCACCCTTCTaGAGGATCAGCGCTCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSSPVSRCACRASLWVFVRISPF*RISAPV Trigger: TACCGGAGCGCTGATCCTGCAGAAGGGTGAGATCCG...CACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGAGAGGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CCA 90 bp | TCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGTCGGCTGGCAGCTGGAAGAAAGTaGCCTCAAAGCCAGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCIQVCMSGIPVGVCGRLAAGRK*PQSQDV Trigger: GACATCCTGGCTTTGAGGCCACTTTCTTCCAGCTGC...CAGCCGACCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CCA 90 bp | TGTTCCTCTCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGCCAGCAGGGAAGACATaGGTAGCATCAGGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSSPVSRCACRASLWVFVPAGKT*VASGRQ Trigger: CTGCCTGCCTGATGCTACCCATGTCTTCCCTGCTGG...CACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGAGAGGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CCA 90 bp | AATTTCAGCCTTAGGTACCACTCTTTTCTGGGGTTCCTAGGGCTGGCGCTTCCTCCACCAGAGTCACCCTaGCAGGAGTCCACACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NFSLRYHSFLGFLGLALPPPESP*QESTPP Trigger: TGGGGGTGTGGACTCCTGCCAGGGTGACTCTGGTGG...AGGAAGCGCCAGCCCTAGGAACCCCAGAAAAGAGTGGTACCTAAGGCTGAAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| 3UTR CAA 72 bp | GCTGGGCCGCTAGCACGCAAGTTCTCTCTCCAACTCTaGAGGGGGTCCCACTTTGGAAGAACTCTGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGPLARKFSLQL*RGSHFGRTLSP Trigger: AGGACTCAGAGTTCTTCCAAAGTGGGACCCCCTCAAGAGTTGGAGAGAGAACTTGCGTGCTAGCGGCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR GCA 90 bp | AATTTCAGCCTTAGGTACCACTCTTTTCTGGGGTTCCTAGGGCTGGCGCTTCCTAGGAGGGTGAGAAGGTaGCACACAGCCGCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NFSLRYHSFLGFLGLALPRRVRR*HTAAPQ Trigger: CTGTGGTGCGGCTGTGTGGCACCTTCTCACCCTCCT...AGGAAGCGCCAGCCCTAGGAACCCCAGAAAAGAGTGGTACCTAAGGCTGAAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR TCA 90 bp | GGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGCATCCCATTGGAACACTTaGAACTCCCAGCAGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRPQHKCRQCSSPVSRCASHWNT*NSQQDS Trigger: GCTGTCCTGCTGGGAGTTTCAAGTGTTCCAATGGGA...TGCACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR TCA 90 bp | CGCCTCCTTCACCTGGCTGGCCAGGCTGATAAACTCTGTGGAGGTGGAGTTCTCCCATTGAAGACTTTTTaGACCCGCACATTCCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: RLLHLAGQADKLCGGGVLPLKTF*TRTFRS Trigger: AGATCGGAATGTGCGGGTTCAAAAAGTCTTCAATGG...GAGAACTCCACCTCCACAGAGTTTATCAGCCTGGCCAGCCAGGTGAAGGAGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214418.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGCAACTGGTGGGTGGCATTaGATCGGCAGTAACGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRPQHKCRQCSSPVSRCATGGWH*IGSNAH Trigger: ATGAGCGTTACTGCCGATGCAATGCCACCCACCAGT...TGCACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CCA 90 bp | AATTTCAGCCTTAGGTACCACTCTTTTCTGGGGTTCCTAGGGCTGGCGCTTCCTTCCTCTGCAGCATTCTaGGGTCAATGGGGAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NFSLRYHSFLGFLGLALPSSAAF*GQWGRP Trigger: TGGCCTTCCCCATTGACCCCAGAATGCTGCAGAGGA...AGGAAGCGCCAGCCCTAGGAACCCCAGAAAAGAGTGGTACCTAAGGCTGAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CCA 90 bp | AATTTCAGCCTTAGGTACCACTCTTTTCTGGGGTTCCTAGGGCTGGCGCTTCCTCCTTGTGTACACGCCTaGCTTGTTCCTCTGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NFSLRYHSFLGFLGLALPPCVHA*LVPLSA Trigger: TGCGCTCAGAGGAACAAGCCAGGCGTGTACACAAGG...AGGAAGCGCCAGCCCTAGGAACCCCAGAAAAGAGTGGTACCTAAGGCTGAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR TCA 90 bp | AACTCTGTGGAGGTGGAGTTCTCATACGCATCCAGAAAGATCTCATTTGTGATCGCCGGGAGTTGTACTTaGGTCCCGCGCCGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSVEVEFSYASRKISFVIAGSCT*VPRRSP Trigger: AGGACTTCGGCGCGGGACTCAAGTACAACTCCCGGC...GATCACAAATGAGATCTTTCTGGATGCGTATGAGAACTCCACCTCCACAGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123557.2 ENSMUST00000214418.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGCAAGTACTTCTCCCCGTTaGTCTCCACATAGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRPQHKCRQCSSPVSRCASTSPR*SPHSPW Trigger: CCAAGGACTATGTGGAGATCAACGGGGAGAAGTACT...TGCACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR GCA 90 bp | TACTCTCAAATACCCACCCCTGGCAACAGCAAAACAATTTCAGCCTTAGGTACCGAAGCTGAACAGCACTaGCACCAGCACCACCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: YSQIPTPGNSKTISALGTEAEQH*HQHHPA Trigger: CGCTGGGTGGTGCTGGTGGCAGTGCTGTTCAGCTTC...GGTACCTAAGGCTGAAATTGTTTTGCTGTTGCCAGGGGTGGGTATTTGAGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CCA 90 bp | AATTTCAGCCTTAGGTACCACTCTTTTCTGGGGTTCCTAGGGCTGGCGCTTCCTAGGGGCTTGCAGAACTaGTTTTTGCACGTGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFSLRYHSFLGFLGLALPRGLQN*FLHVNW Trigger: CCAGTTCACGTGCAAAAACCAGTTCTGCAAGCCCCT...AGGAAGCGCCAGCCCTAGGAACCCCAGAAAAGAGTGGTACCTAAGGCTGAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| 3UTR CAA 72 bp | CTCTGTGGGAGCCATGAGGGACCAGCAGAATCAGTCTaGGGAAGGAGACAGACAAGTCACAACTCAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCGSHEGPAESV*GRRQTSHNSKA Trigger: AGCTTTTGAGTTGTGACTTGTCTGTCTCCTTCCCAAGACTGATTCTGCTGGTCCCTCATGGCTCCCACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
||
| CDS-3UTR CCA 90 bp | TACTCTCAAATACCCACCCCTGGCAACAGCAAAACAATTTCAGCCTTAGGTACCGTCACTGCTGCACCATaGGCATGCAGGGCAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: YSQIPTPGNSKTISALGTVTAAP*ACRAKL Trigger: CAGTTTTGCCCTGCATGCCCATGGTGCAGCAGTGAC...GGTACCTAAGGCTGAAATTGTTTTGCTGTTGCCAGGGGTGGGTATTTGAGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR GCA 90 bp | TACTCTCAAATACCCACCCCTGGCAACAGCAAAACAATTTCAGCCTTAGGTACCACTCAGGGTTGCCCTTaGTCAGACAGAGGCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSQIPTPGNSKTISALGTTQGCP*SDRGHF Trigger: AAAATGGCCTCTGTCTGAGCAAGGGCAACCCTGAGT...GGTACCTAAGGCTGAAATTGTTTTGCTGTTGCCAGGGGTGGGTATTTGAGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR GCA 90 bp | TACTCTCAAATACCCACCCCTGGCAACAGCAAAACAATTTCAGCCTTAGGTACCGGTAGGTATATTTGGTaGAAGAGACGACATTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: YSQIPTPGNSKTISALGTGRYIW*KRRHSR Trigger: GCGTGAATGTCGTCTCTTGCACCAAATATACCTACC...GGTACCTAAGGCTGAAATTGTTTTGCTGTTGCCAGGGGTGGGTATTTGAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| 3UTR CAA 72 bp | CTCATTTGTGATCCTCAGATGGCCATTGAAGACTTTTaGAACCCGCACATTCCGATAATGGAAGTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LICDPQMAIEDF*NPHIPIMEVPH Trigger: GTGTGGCACTTCCATTATCGGAATGTGCGGGTTCAAAAAGTCTTCAATGGCCATCTGAGGATCACAAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
||
| CDS GCA 90 bp | GAGGCCCCACACAAGTGGCCCTGGCCCAGGGCGTGGAGGCTCACCTaGCAGGGCCACTCGCCCTCGTCCGCATTCGTGCCACCAACCACG | + |
|
Preference number: 5 (lower is better) Translates to: EAPHKWPWPRAWRLT*QGHSPSSAFVPPTT Trigger: CGTGGTTGGTGGCACGAATGCGGACGAGGGCGAGTGGCCCTGGCAGGTGAGCCTCCACGCCCTGGGCCAGGGCCACTTGTGTGGGGCCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | AGGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAAGCCGGGAGTTGTACTaGAGTCCCGCGCCGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGKAAIKPLPPGWAASTQSRELY*SPAPKS Trigger: GGACTTCGGCGCGGGACTCAAGTACAACTCCCGGCT...TTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | GCGGGCATGCGCCGGGTAGGGACTGTTGGGGAAGCCAGGGGTAGTGAAGCGTGTAGCCGGGAGTTGTACTaGAGTCCCGCGCCGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGMRRVGTVGEARGSEACSRELY*SPAPKS Trigger: GGACTTCGGCGCGGGACTCAAGTACAACTCCCGGCT...ACACGCTTCACTACCCCTGGCTTCCCCAACAGTCCCTACCCGGCGCATGCCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123557.2 ENSMUST00000214418.2 |
||
| CDS TCA 90 bp | CCCAAGAGACAACAGCCACACAGACCTCTAGCCGGGAGTTGTACTTaGGTCCCGCGCCGAAGTCCTGAGAGCCCCCTCCGGCCTTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PKRQQPHRPLAGSCT*VPRRSPESPLRPCG Trigger: GCCGCAAGGCCGGAGGGGGCTCTCAGGACTTCGGCGCGGGACTCAAGTACAACTCCCGGCTAGAGGTCTGTGTGGCTGTTGTCTCTTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGGGCTAGAGGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCCATCACACTCAGGGTaGCCCTTGCTCAGACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRARGGRLPSNPCPQAGPPSHSG*PLLRQR Trigger: CCTCTGTCTGAGCAAGGGCAACCCTGAGTGTGATGG...CGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCCTCTAGCCCTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS TCA 90 bp | CATCCTGAAAGCAATGAGCTGCAGAGACCAGCCAGTCAGGAGAGATaGGCGAGGCCCCACACAAGTGGCCCTGGCCCAGGGCGTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HPESNELQRPASQER*ARPHTSGPGPGRGG Trigger: GCCTCCACGCCCTGGGCCAGGGCCACTTGTGTGGGGCCTCGCTCATCTCTCCTGACTGGCTGGTCTCTGCAGCTCATTGCTTTCAGGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS TCA 90 bp | CACCCTCCTCAAAGCCATTCATGTTCTCTAGCCGGGAGTTGTACTTaGGTCCCGCGCCGAAGTCCTGAGAGCCCCCTCCGGCCTTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: HPPQSHSCSLAGSCT*VPRRSPESPLRPCG Trigger: GCCGCAAGGCCGGAGGGGGCTCTCAGGACTTCGGCGCGGGACTCAAGTACAACTCCCGGCTAGAGAACATGAATGGCTTTGAGGAGGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | CTCAGGGCTAGAGGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGACCCCAGTGTGCTCTTaGATCCAGTCCCGAACTACA | + |
|
Preference number: 5 (lower is better) Translates to: LRARGGRLPSNPCPQAGPTPVCS*IQSRTT Trigger: TGTAGTTCGGGACTGGATCAAAGAGCACACTGGGGT...CGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCCTCTAGCCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | GACAAGTCACAACTCAAAAGCTGTGGTGGTGGTGCCCCTGGGACTCAGCCAGACAGCCGGGAGTTGTACTaGAGTCCCGCGCCGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DKSQLKSCGGGAPGTQPDSRELY*SPAPKS Trigger: GGACTTCGGCGCGGGACTCAAGTACAACTCCCGGCT...GTCTGGCTGAGTCCCAGGGGCACCACCACCACAGCTTTTGAGTTGTGACTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGTCGGCTGTTCTCTAGCCGGGAGTaGTACTTGAGTCCCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SCIQVCMSGIPVGVCGRLFSSRE*YLSPAP Trigger: CGGCGCGGGACTCAAGTACAACTCCCGGCTAGAGAA...CAGCCGACCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | CCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGTTCTCTCTCCAACTCTTGAGCGCTTCTCCACTTTCTaGGCATTGTTCGCAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLPPGWAASTQVLSPTLERFSTF*ALFAGR Trigger: CCTGCCTGCGAACAATGCCAAGAAAGTGGAGAAGCG...CTCAAGAGTTGGAGAGAGAACTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | AGGGGGAAGGCTGCCATCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAATTGCAGAACTGGTTTTaGCACGTGAACTGGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGKAAIKPLPPGWAASTQLQNWF*HVNWWV Trigger: CACCCACCAGTTCACGTGCAAAAACCAGTTCTGCAA...TTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGATGGCAGCCTTCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS TCA 90 bp | AAGGAAGACGTTCTGGGAGGAGAGGAAAGTCAGGTTGTAGGAGGGTaGGAAGGTGCCACACAGCCGCACCACAGCGTGGGGTTCCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: KEDVLGGEESQVVGG*EGATQPHHSVGFHG Trigger: CCCATGGAACCCCACGCTGTGGTGCGGCTGTGTGGCACCTTCTCACCCTCCTACAACCTGACTTTCCTCTCCTCCCAGAACGTCTTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS GCA 90 bp | GGCATTGCATCGGCAGTAACGCTCATCACTATAATCCGGGCAGTCTaGCCAGCCGTCGCAGCGCAGTTCCTTTCGGATGCACCGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GIASAVTLITIIRAV*PAVAAQFLSDAPSS Trigger: ACTGGACGGTGCATCCGAAAGGAACTGCGCTGCGACGGCTGGGCAGACTGCCCGGATTATAGTGATGAGCGTTACTGCCGATGCAATGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS GCA 90 bp | AGGTCCTCACAGGTGGTCTGGTTGATGACACGGATCTCACCCTTCTaGAGGATCAGCGCTCCGGTACCTCCCTCTTTTGTGTGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSSQVVWLMTRISPF*RISAPVPPSFVCPQ Trigger: CTGGGGGCACACAAAAGAGGGAGGTACCGGAGCGCTGATCCTGCAGAAGGGTGAGATCCGTGTCATCAACCAGACCACCTGTGAGGACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CCA 90 bp | ATTCGTGGGGTGATCTGCTGCGGCATGAGGTCCTCACAGGTGGTCTaGTTGATGACACGGATCTCACCCTTCTGCAGGATCAGCGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: IRGVICCGMRSSQVV*LMTRISPFCRISAP Trigger: CGGAGCGCTGATCCTGCAGAAGGGTGAGATCCGTGTCATCAACCAGACCACCTGTGAGGACCTCATGCCGCAGCAGATCACCCCACGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | TCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGTCGGCTGCATCTTTCTCCGCGCTaGACAAGGGGCCACCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SCIQVCMSGIPVGVCGRLHLSPR*TRGHQS Trigger: ACTCTGGTGGCCCCTTGTCAAGCGCGGAGAAAGATG...CAGCCGACCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | AACTGCAGCTGTTGTCCTGAGTCCTCTGCAGCATTCTGGGGTCAATGGGGAAGGACCTCTAGCCGGGAGTaGTACTTGAGTCCCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NCSCCPESSAAFWGQWGRTSSRE*YLSPAP Trigger: CGGCGCGGGACTCAAGTACAACTCCCGGCTAGAGGT...CCTTCCCCATTGACCCCAGAATGCTGCAGAGGACTCAGGACAACAGCTGCAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
||
| CDS GCA 90 bp | CCCCCACTGAGGAAACCCACACACATCATTCGTGGGGTGATCTGCTaGGGCATGAGGTCCTCACAGGTGGTCTGGTTGATGACACGGATC | + |
|
Preference number: 5 (lower is better) Translates to: PPLRKPTHIIRGVIC*GMRSSQVVWLMTRI Trigger: GATCCGTGTCATCAACCAGACCACCTGTGAGGACCTCATGCCGCAGCAGATCACCCCACGAATGATGTGTGTGGGTTTCCTCAGTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS GCA 90 bp | ACACCCCCACTGAGGAAACCCACACACATCATTCGTGGGGTGATCTaGTGCGGCATGAGGTCCTCACAGGTGGTCTGGTTGATGACACGG | + |
|
Preference number: 5 (lower is better) Translates to: TPPLRKPTHIIRGVI*CGMRSSQVVWLMTR Trigger: CCGTGTCATCAACCAGACCACCTGTGAGGACCTCATGCCGCAGCAGATCACCCCACGAATGATGTGTGTGGGTTTCCTCAGTGGGGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | TCAAACCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGTTCTCTCTCCAACTCACCCAGAAGAGGGGCTaGCAGAACTGGTTTTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SNPCPQAGPLARKFSLQLTQKRG*QNWFLH Trigger: GTGCAAAAACCAGTTCTGCAAGCCCCTCTTCTGGGT...GAGTTGGAGAGAGAACTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGGTTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | CCCTTGCCCCCAGGCTGGGCCGCTAGCACGCAAGTTCTCTCTCCAACTCTTGAGGGGAGACACTTCCCATaGGAACACTTGAAACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLPPGWAASTQVLSPTLEGRHFP*EHLKLP Trigger: TGGGAGTTTCAAGTGTTCCAATGGGAAGTGTCTCCC...CTCAAGAGTTGGAGAGAGAACTTGCGTGCTAGCGGCCCAGCCTGGGGGCAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | TCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGTCGGCTGTCACAGGTGGTCTGGTaGATGACACGGATCTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: SCIQVCMSGIPVGVCGRLSQVVW*MTRISP Trigger: GGGTGAGATCCGTGTCATCAACCAGACCACCTGTGA...CAGCCGACCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS GCA 90 bp | TCCATGGGGCTCAGGCTATCATACACGGTGACCAGGTCACTGCCATaGTCATCACAGGGAGCGACATCAAAGCTTCGGAAGGTGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SMGLRLSYTVTRSLP*SSQGATSKLRKVRL Trigger: GAGCCTCACCTTCCGAAGCTTTGATGTCGCTCCCTGTGATGAGCATGGCAGTGACCTGGTCACCGTGTATGATAGCCTGAGCCCCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | GGGGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGGAACTACAGGGAGCCTaGTGTACACGCCTGGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGGHSINVVSVPLLYPGVELQGA*CTRLAC Trigger: ACAAGCCAGGCGTGTACACAAGGCTCCCTGTAGTTC...CACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS GCA 90 bp | AGCCATCGCTACAGTCCGTCTTCCCATCACACTCAGGGTTGCCCTTaGTCAGACAGAGGCCATTTTGGCAGCGGTAGGTATATTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SHRYSPSSHHTQGCP*SDRGHFGSGRYIWC Trigger: GCACCAAATATACCTACCGCTGCCAAAATGGCCTCTGTCTGAGCAAGGGCAACCCTGAGTGTGATGGGAAGACGGACTGTAGCGATGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CCA 90 bp | TCAAAAAGCCGCCACAGCTGCTCATCTTGGGCAGCTGGAAGAAAGTaGCCTCAAAGCCAGGATGTCGCCGGTCAGTATTGGTTATCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SKSRHSCSSWAAGRK*PQSQDVAGQYWLSA Trigger: CGCTGATAACCAATACTGACCGGCGACATCCTGGCTTTGAGGCCACTTTCTTCCAGCTGCCCAAGATGAGCAGCTGTGGCGGCTTTTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CCA 90 bp | CTTCTCCCCGTTGATCTCCACATAGTCCTTGGTGCAGGAGCCCACTaGTACGTTGGGGTCCACCAGATAGAAGAGTTTGAAGCGCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLPVDLHIVLGAGAH*YVGVHQIEEFEAHL Trigger: AAGGTGCGCTTCAAACTCTTCTATCTGGTGGACCCCAACGTACCAGTGGGCTCCTGCACCAAGGACTATGTGGAGATCAACGGGGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | GTTCCTCTCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGCGGTTGTTGGGCACCTaGATATTCCATGTGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPLLYPGVHVGHPCGCLWRLLGT*IFHVQL Trigger: CAACTGCACATGGAATATCAAGGTGCCCAACAACCG...CCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGAGAGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | GTTCCTCTCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGTTCCCATTGGAACACTaGAAACTCCCAGCAGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: VPLLYPGVHVGHPCGCLWFPLEH*KLPAGQ Trigger: CTGTCCTGCTGGGAGTTTCAAGTGTTCCAATGGGAA...CCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGAGAGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGCACACTCAGGGTTGCCCTaGCTCAGACAGAGGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: GRPQHKCRQCSSPVSRCAHSGLP*LRQRPF Trigger: AAATGGCCTCTGTCTGAGCAAGGGCAACCCTGAGTG...TGCACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | TCCTGTATCCAGGTGTGCATGTCGGGCATCCCTGTGGGTGTTTGTGGTCGGCTGTCGAAGGTGAAATCATaGAAGGAAGGGTGGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SCIQVCMSGIPVGVCGRLSKVKS*KEGWVM Trigger: CATCACCCACCCTTCCTTCAATGATTTCACCTTCGA...CAGCCGACCACAAACACCCACAGGGATGCCCGACATGCACACCTGGATACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGCATCCACTTTCTTGGCATaGTTCGCAGGCAGGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRPQHKCRQCSSPVSRCASTFLA*FAGRNS Trigger: GGAGTTCCTGCCTGCGAACAATGCCAAGAAAGTGGA...TGCACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGCATGGGTGATGATACGTTaGAGCTTCAGCTCCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GRPQHKCRQCSSPVSRCAWVMIR*SFSSCT Trigger: GGTGCAGGAGCTGAAGCTCAAACGTATCATCACCCA...TGCACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS TCA 90 bp | TGTCACAGACCCAGAAGAGGGGCTTGCAGAACTGGTTTTTGCACGTaGACTGGTGGGTGGCATTGCATCGGCAGTAACGCTCATCACTAT | + |
|
Preference number: 5 (lower is better) Translates to: CHRPRRGACRTGFCT*TGGWHCIGSNAHHY Trigger: ATAGTGATGAGCGTTACTGCCGATGCAATGCCACCCACCAGTTCACGTGCAAAAACCAGTTCTGCAAGCCCCTCTTCTGGGTCTGTGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS GCA 90 bp | CCTTGCTCAGACAGAGGCCATTTTGGCAGCGGTAGGTATATTTGGTaGAAGAGACGACATTCACGCTGTCACATGAAGCCTCGTCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: PCSDRGHFGSGRYIW*KRRHSRCHMKPRQT Trigger: GGTCTGACGAGGCTTCATGTGACAGCGTGAATGTCGTCTCTTGCACCAAATATACCTACCGCTGCCAAAATGGCCTCTGTCTGAGCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CCA 90 bp | TGCCCTTGCTCAGACAGAGGCCATTTTGGCAGCGGTAGGTATATTTaGTGCAAGAGACGACATTCACGCTGTCACATGAAGCCTCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPCSDRGHFGSGRYI*CKRRHSRCHMKPRQ Trigger: CTGACGAGGCTTCATGTGACAGCGTGAATGTCGTCTCTTGCACCAAATATACCTACCGCTGCCAAAATGGCCTCTGTCTGAGCAAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGCAGACCCATCTCCACAGTaGTCCTTCCCATTACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRPQHKCRQCSSPVSRCADPSPQ*SFPLHF Trigger: GAAGTGTAATGGGAAGGACAACTGTGGAGATGGGTC...TGCACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | TACTCTCAAATACCCACCCCTGGCAACAGCAAAACAATTTCAGCCTTAGGTACCGTGACCCAGATGGCCTaGCCAGCAGGGAAGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: YSQIPTPGNSKTISALGTVTQMA*PAGKTW Trigger: CCATGTCTTCCCTGCTGGCAAGGCCATCTGGGTCAC...GGTACCTAAGGCTGAAATTGTTTTGCTGTTGCCAGGGGTGGGTATTTGAGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGCATTCACGTTCCGGTTGTaGGGCACCTTGATATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GRPQHKCRQCSSPVSRCAFTFRL*GTLIFH Trigger: ATGGAATATCAAGGTGCCCAACAACCGGAACGTGAA...TGCACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCCACAGCATAAATGTCGTCAGTGTTCCTCTCCTGTATCCAGGTGTGCACAGACAGAGGCCATTTaGGCAGCGGTAGGTATATTT | + |
|
Preference number: 5 (lower is better) Translates to: GRPQHKCRQCSSPVSRCAQTEAI*AAVGIF Trigger: AAATATACCTACCGCTGCCAAAATGGCCTCTGTCTG...TGCACACCTGGATACAGGAGAGGAACACTGACGACATTTATGCTGTGGCCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS-3UTR CAA 90 bp | GCTGATAAACTCTGTGGAGGTGGAGTTCTCATACGCATCCAGAAAGATCTCATTATCTCTAGCCGGGAGTaGTACTTGAGTCCCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ADKLCGGGVLIRIQKDLIISSRE*YLSPAP Trigger: CGGCGCGGGACTCAAGTACAACTCCCGGCTAGAGAT...AATGAGATCTTTCTGGATGCGTATGAGAACTCCACCTCCACAGAGTTTATCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214418.2 |
||
| CDS TCA 90 bp | GCTCTGGTCCAGCAGACCCAGGAAGGCCGTCCACATCGTGTAGTCTaGGTACTTGAAATTTTTGTCATCCTGAAAGCAATGAGCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALVQQTQEGRPHRVV*VLEIFVILKAMSCR Trigger: TCTGCAGCTCATTGCTTTCAGGATGACAAAAATTTCAAGTACTCAGACTACACGATGTGGACGGCCTTCCTGGGTCTGCTGGACCAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CCA 90 bp | CACCTTGATATTCCATGTGCAGTTGATGTTGGGCGGGTAGTGGCCTaGATAGTAGGGGCTGCTAAATGTCCCTTGGGTGTCACTCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HLDIPCAVDVGRVVA*IVGAAKCPLGVTQK Trigger: TTTTTGAGTGACACCCAAGGGACATTTAGCAGCCCCTACTATCCAGGCCACTACCCGCCCAACATCAACTGCACATGGAATATCAAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CCA 72 bp | AGCCAGTCAGGAGAGATGAGCGAGGCCCCACACAAGTaGCCCTGGCCCAGGGCGTGGAGGCTCACCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SQSGEMSEAPHK*PWPRAWRLTCQ Trigger: CTGGCAGGTGAGCCTCCACGCCCTGGGCCAGGGCCACTTGTGTGGGGCCTCGCTCATCTCTCCTGACTGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS TCA 72 bp | AGCCGGGAGTTGTACTTGAGTCCCGCGCCGAAGTCCTaGGAGCCCCCTCCGGCCTTGCGGCCCCGATTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SRELYLSPAPKS*EPPPALRPRLL Trigger: TAGCAATCGGGGCCGCAAGGCCGGAGGGGGCTCTCAGGACTTCGGCGCGGGACTCAAGTACAACTCCCGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034478.3 ENSMUST00000123557.2 ENSMUST00000214418.2 |
||
| CDS TCA 72 bp | CAACAGCCACACAGACCTCTAGCCGGGAGTTGTACTTaGGTCCCGCGCCGAAGTCCTGAGAGCCCCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QQPHRPLAGSCT*VPRRSPESPLR Trigger: CCGGAGGGGGCTCTCAGGACTTCGGCGCGGGACTCAAGTACAACTCCCGGCTAGAGGTCTGTGTGGCTGTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123557.2 |
||
| CDS TCA 72 bp | ACCCGCACATTCCGATCTCTAGCCGGGAGTTGTACTTaGGTCCCGCGCCGAAGTCCTGAGAGCCCCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TRTFRSLAGSCT*VPRRSPESPLR Trigger: CCGGAGGGGGCTCTCAGGACTTCGGCGCGGGACTCAAGTACAACTCCCGGCTAGAGATCGGAATGTGCGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214418.2 |
||
| CDS CCA 72 bp | TTCAGCTCCTGCACCCCAGAGGCACTGCGCTTGCTCTaGTCCAGCAGACCCAGGAAGGCCGTCCACATCGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSSCTPEALRLL*SSRPRKAVHIV Trigger: CACGATGTGGACGGCCTTCCTGGGTCTGCTGGACCAGAGCAAGCGCAGTGCCTCTGGGGTGCAGGAGCTGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS TCA 72 bp | GTTCTGGGAGGAGAGGAAAGTCAGGTTGTAGGAGGGTaGGAAGGTGCCACACAGCCGCACCACAGCGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VLGGEESQVVGG*EGATQPHHSVG Trigger: CCCCACGCTGTGGTGCGGCTGTGTGGCACCTTCTCACCCTCCTACAACCTGACTTTCCTCTCCTCCCAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CAA 90 bp | CGTGGGGTGATCTGCTGCGGCATGAGGTCCTCACAGGTGGTCTGGTaGATGACACGGATCTCACCCTTCTGCAGGATCAGCGCTCCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RGVICCGMRSSQVVW*MTRISPFCRISAPV Trigger: TACCGGAGCGCTGATCCTGCAGAAGGGTGAGATCCGTGTCATCAACCAGACCACCTGTGAGGACCTCATGCCGCAGCAGATCACCCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS TCA 72 bp | CAAAGCCATTCATGTTCTCTAGCCGGGAGTTGTACTTaGGTCCCGCGCCGAAGTCCTGAGAGCCCCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QSHSCSLAGSCT*VPRRSPESPLR Trigger: CCGGAGGGGGCTCTCAGGACTTCGGCGCGGGACTCAAGTACAACTCCCGGCTAGAGAACATGAATGGCTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS TCA 72 bp | CGTGGGGTTCCATGGGGCTCAGGCTATCATACACGGTaGCCAGGTCACTGCCATGCTCATCACAGGGAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RGVPWGSGYHTR*PGHCHAHHRER Trigger: TCGCTCCCTGTGATGAGCATGGCAGTGACCTGGTCACCGTGTATGATAGCCTGAGCCCCATGGAACCCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS GCA 72 bp | AGGAGAGGAAAGTCAGGTTGTAGGAGGGTGAGAAGGTaGCACACAGCCGCACCACAGCGTGGGGTTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: RRGKSGCRRVRR*HTAAPQRGVPW Trigger: CCATGGAACCCCACGCTGTGGTGCGGCTGTGTGGCACCTTCTCACCCTCCTACAACCTGACTTTCCTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS GCA 72 bp | GAAGGGTGGGTGATGATACGTTTGAGCTTCAGCTCCTaGACCCCAGAGGCACTGCGCTTGCTCTGGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EGWVMIRLSFSS*TPEALRLLWSS Trigger: GCTGGACCAGAGCAAGCGCAGTGCCTCTGGGGTGCAGGAGCTGAAGCTCAAACGTATCATCACCCACCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CAA 90 bp | GTTGGGCGGGTAGTGGCCTGGATAGTAGGGGCTGCTAAATGTCCCTaGGGTGTCACTCAAAAAGCCGCCACAGCTGCTCATCTTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VGRVVAWIVGAAKCP*GVTQKAATAAHLGQ Trigger: CTGCCCAAGATGAGCAGCTGTGGCGGCTTTTTGAGTGACACCCAAGGGACATTTAGCAGCCCCTACTATCCAGGCCACTACCCGCCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CAA 90 bp | CACTCGCCCTCGTCCGCATTCGTGCCACCAACCACGCGAGCCTGTTaGGTAAAGGATCGCAGCCCACAGTCACAGTTTTTCTCATCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HSPSSAFVPPTTRAC*VKDRSPQSQFFSSE Trigger: CTCCGATGAGAAAAACTGTGACTGTGGGCTGCGATCCTTTACCAAACAGGCTCGCGTGGTTGGTGGCACGAATGCGGACGAGGGCGAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS GCA 72 bp | TCGGCAGTAACGCTCATCACTATAATCCGGGCAGTCTaGCCAGCCGTCGCAGCGCAGTTCCTTTCGGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: SAVTLITIIRAV*PAVAAQFLSDA Trigger: TGCATCCGAAAGGAACTGCGCTGCGACGGCTGGGCAGACTGCCCGGATTATAGTGATGAGCGTTACTGCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CAA 72 bp | CCATCGCTACAGTCCGTCTTCCCATCACACTCAGGGTaGCCCTTGCTCAGACAGAGGCCATTTTGGCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PSLQSVFPSHSG*PLLRQRPFWQR Trigger: CCGCTGCCAAAATGGCCTCTGTCTGAGCAAGGGCAACCCTGAGTGTGATGGGAAGACGGACTGTAGCGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CAA 90 bp | AATGTCCCTTGGGTGTCACTCAAAAAGCCGCCACAGCTGCTCATCTaGGGCAGCTGGAAGAAAGTGGCCTCAAAGCCAGGATGTCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: NVPWVSLKKPPQLLI*GSWKKVASKPGCRR Trigger: CCGGCGACATCCTGGCTTTGAGGCCACTTTCTTCCAGCTGCCCAAGATGAGCAGCTGTGGCGGCTTTTTGAGTGACACCCAAGGGACATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS TCA 72 bp | CAAACTGGGACCTCTCACCGCAGTACTTCTCCCCGTTaGTCTCCACATAGTCCTTGGTGCAGGAGCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: QTGTSHRSTSPR*SPHSPWCRSPL Trigger: CAGTGGGCTCCTGCACCAAGGACTATGTGGAGATCAACGGGGAGAAGTACTGCGGTGAGAGGTCCCAGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS GCA 72 bp | CATCGCTACAGTCCGTCTTCCCATCACACTCAGGGTTaGCCTTGCTCAGACAGAGGCCATTTTGGCAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: HRYSPSSHHTQG*PCSDRGHFGSG Trigger: ACCGCTGCCAAAATGGCCTCTGTCTGAGCAAGGGCAACCCTGAGTGTGATGGGAAGACGGACTGTAGCGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS GCA 72 bp | CAGGTGGTCTGGTTGATGACACGGATCTCACCCTTCTaGAGGATCAGCGCTCCGGTACCTCCCTCTTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QVVWLMTRISPF*RISAPVPPSFV Trigger: CACAAAAGAGGGAGGTACCGGAGCGCTGATCCTGCAGAAGGGTGAGATCCGTGTCATCAACCAGACCACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS GCA 72 bp | CTGAGGAAACCCACACACATCATTCGTGGGGTGATCTaGTGCGGCATGAGGTCCTCACAGGTGGTCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRKPTHIIRGVI*CGMRSSQVVWL Trigger: CAACCAGACCACCTGTGAGGACCTCATGCCGCAGCAGATCACCCCACGAATGATGTGTGTGGGTTTCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CCA 72 bp | GTGATCTGCTGCGGCATGAGGTCCTCACAGGTGGTCTaGTTGATGACACGGATCTCACCCTTCTGCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: VICCGMRSSQVV*LMTRISPFCRI Trigger: GATCCTGCAGAAGGGTGAGATCCGTGTCATCAACCAGACCACCTGTGAGGACCTCATGCCGCAGCAGATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS TCA 72 bp | CCACTGGTACGTTGGGGTCCACCAGATAGAAGAGTTTaGAGCGCACCTTCACGTTCCGGTTGTTGGGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: PLVRWGPPDRRV*SAPSRSGCWAP Trigger: AGGTGCCCAACAACCGGAACGTGAAGGTGCGCTTCAAACTCTTCTATCTGGTGGACCCCAACGTACCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS TCA 72 bp | CCCAGAAGAGGGGCTTGCAGAACTGGTTTTTGCACGTaGACTGGTGGGTGGCATTGCATCGGCAGTAACGCT | + |
|
Preference number: 6 (lower is better) Translates to: PRRGACRTGFCT*TGGWHCIGSNA Trigger: AGCGTTACTGCCGATGCAATGCCACCCACCAGTTCACGTGCAAAAACCAGTTCTGCAAGCCCCTCTTCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS GCA 72 bp | AGGAAACCCACACACATCATTCGTGGGGTGATCTGCTaGGGCATGAGGTCCTCACAGGTGGTCTGGTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: RKPTHIIRGVIC*GMRSSQVVWLM Trigger: CATCAACCAGACCACCTGTGAGGACCTCATGCCGCAGCAGATCACCCCACGAATGATGTGTGTGGGTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CAA 72 bp | TGGGTGTCACTCAAAAAGCCGCCACAGCTGCTCATCTaGGGCAGCTGGAAGAAAGTGGCCTCAAAGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WVSLKKPPQLLI*GSWKKVASKPG Trigger: TCCTGGCTTTGAGGCCACTTTCTTCCAGCTGCCCAAGATGAGCAGCTGTGGCGGCTTTTTGAGTGACACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
||
| CDS CAA 72 bp | TCGTCCGCATTCGTGCCACCAACCACGCGAGCCTGTTaGGTAAAGGATCGCAGCCCACAGTCACAGTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SSAFVPPTTRAC*VKDRSPQSQFF Trigger: GAAAAACTGTGACTGTGGGCTGCGATCCTTTACCAAACAGGCTCGCGTGGTTGGTGGCACGAATGCGGACGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS GCA 72 bp | ATGTCCCTTGGGTGTCACTCAAAAAGCCGCCACAGCTaGTCATCTTGGGCAGCTGGAAGAAAGTGGCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: MSLGCHSKSRHS*SSWAAGRKWPQ Trigger: TTGAGGCCACTTTCTTCCAGCTGCCCAAGATGAGCAGCTGTGGCGGCTTTTTGAGTGACACCCAAGGGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS CCA 72 bp | ATTCCATGTGCAGTTGATGTTGGGCGGGTAGTGGCCTaGATAGTAGGGGCTGCTAAATGTCCCTTGGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: IPCAVDVGRVVA*IVGAAKCPLGV Trigger: GACACCCAAGGGACATTTAGCAGCCCCTACTATCCAGGCCACTACCCGCCCAACATCAACTGCACATGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS CAA 72 bp | GTAGTGGCCTGGATAGTAGGGGCTGCTAAATGTCCCTaGGGTGTCACTCAAAAAGCCGCCACAGCTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VVAWIVGAAKCP*GVTQKAATAAH Trigger: ATGAGCAGCTGTGGCGGCTTTTTGAGTGACACCCAAGGGACATTTAGCAGCCCCTACTATCCAGGCCACTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS CAA 72 bp | CAGTCGTTGACACTGTCACAGACCCAGAAGAGGGGCTaGCAGAACTGGTTTTTGCACGTGAACTGGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: QSLTLSQTQKRG*QNWFLHVNWWV Trigger: CACCCACCAGTTCACGTGCAAAAACCAGTTCTGCAAGCCCCTCTTCTGGGTCTGTGACAGTGTCAACGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS CCA 72 bp | ACACTGTCACAGACCCAGAAGAGGGGCTTGCAGAACTaGTTTTTGCACGTGAACTGGTGGGTGGCATTGCAT | + |
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Preference number: 6 (lower is better) Translates to: TLSQTQKRGLQN*FLHVNWWVALH Trigger: ATGCAATGCCACCCACCAGTTCACGTGCAAAAACCAGTTCTGCAAGCCCCTCTTCTGGGTCTGTGACAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS CAA 72 bp | AAAGTGGCCTCAAAGCCAGGATGTCGCCGGTCAGTATaGGTTATCAGCGTGACAAGGAAGACGTTCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: KVASKPGCRRSV*VISVTRKTFWE Trigger: CTCCCAGAACGTCTTCCTTGTCACGCTGATAACCAATACTGACCGGCGACATCCTGGCTTTGAGGCCACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS CAA 72 bp | ACACTCAGGGTTGCCCTTGCTCAGACAGAGGCCATTTaGGCAGCGGTAGGTATATTTGGTGCAAGAGACGAC | + |
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Preference number: 6 (lower is better) Translates to: TLRVALAQTEAI*AAVGIFGARDD Trigger: GTCGTCTCTTGCACCAAATATACCTACCGCTGCCAAAATGGCCTCTGTCTGAGCAAGGGCAACCCTGAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS CAA 90 bp | AGCTGGAAGAAAGTGGCCTCAAAGCCAGGATGTCGCCGGTCAGTATaGGTTATCAGCGTGACAAGGAAGACGTTCTGGGAGGAGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SWKKVASKPGCRRSV*VISVTRKTFWEERK Trigger: TTTCCTCTCCTCCCAGAACGTCTTCCTTGTCACGCTGATAACCAATACTGACCGGCGACATCCTGGCTTTGAGGCCACTTTCTTCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS CAA 90 bp | CTTCCCATCACACTCAGGGTTGCCCTTGCTCAGACAGAGGCCATTTaGGCAGCGGTAGGTATATTTGGTGCAAGAGACGACATTCACGCT | + |
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Preference number: 6 (lower is better) Translates to: LPITLRVALAQTEAI*AAVGIFGARDDIHA Trigger: AGCGTGAATGTCGTCTCTTGCACCAAATATACCTACCGCTGCCAAAATGGCCTCTGTCTGAGCAAGGGCAACCCTGAGTGTGATGGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS CCA 72 bp | GTTGATCTCCACATAGTCCTTGGTGCAGGAGCCCACTaGTACGTTGGGGTCCACCAGATAGAAGAGTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: VDLHIVLGAGAH*YVGVHQIEEFE Trigger: TTCAAACTCTTCTATCTGGTGGACCCCAACGTACCAGTGGGCTCCTGCACCAAGGACTATGTGGAGATCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS GCA 72 bp | GACAGAGGCCATTTTGGCAGCGGTAGGTATATTTGGTaGAAGAGACGACATTCACGCTGTCACATGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: DRGHFGSGRYIW*KRRHSRCHMKP Trigger: AGGCTTCATGTGACAGCGTGAATGTCGTCTCTTGCACCAAATATACCTACCGCTGCCAAAATGGCCTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS TCA 72 bp | TCTCCACAGTTGTCCTTCCCATTACACTTCTGGCTCTaGGGGAGACACTTCCCATTGGAACACTTGAAACTC | + |
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Preference number: 6 (lower is better) Translates to: SPQLSFPLHFWL*GRHFPLEHLKL Trigger: GAGTTTCAAGTGTTCCAATGGGAAGTGTCTCCCTCAGAGCCAGAAGTGTAATGGGAAGGACAACTGTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS CCA 72 bp | TCAGACAGAGGCCATTTTGGCAGCGGTAGGTATATTTaGTGCAAGAGACGACATTCACGCTGTCACATGAAG | + |
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Preference number: 6 (lower is better) Translates to: SDRGHFGSGRYI*CKRRHSRCHMK Trigger: CTTCATGTGACAGCGTGAATGTCGTCTCTTGCACCAAATATACCTACCGCTGCCAAAATGGCCTCTGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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| CDS TCA 72 bp | CAGCAGACCCAGGAAGGCCGTCCACATCGTGTAGTCTaGGTACTTGAAATTTTTGTCATCCTGAAAGCAATG | + |
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Preference number: 6 (lower is better) Translates to: QQTQEGRPHRVV*VLEIFVILKAM Trigger: CATTGCTTTCAGGATGACAAAAATTTCAAGTACTCAGACTACACGATGTGGACGGCCTTCCTGGGTCTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034478.3 |
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