Pregenerated sensors for SSTY2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095302Ensembl transcript IDs: ENSMUST00000179136.2, ENSMUST00000190565.2
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATACTGAGGTTGTCAAAGACCCATAGGTACCCAACACAGGAAAACAAACATTTTGTCATTGTCATCACCTaGTCTCACCCCAGCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: ILRLSKTHRYPTQENKHFVIVIT*SHPSQR Trigger: CCTCTGGCTGGGGTGAGATCAGGTGATGACAATGAC...AAAATGTTTGTTTTCCTGTGTTGGGTACCTATGGGTCTTTGACAACCTCAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190565.2 |
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| CDS-3UTR CCA 90 bp | AAGATACTGAGGTTGTCAAAGACCCATAGGTACCCAACACAGGAAAACAAACATATATTCCCCAGGGCCTaGGAAGAATGCTTCCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: KILRLSKTHRYPTQENKHIFPRA*EECFLL Trigger: TAGGAGGAAGCATTCTTCCCAGGCCCTGGGGAATAT...ATGTTTGTTTTCCTGTGTTGGGTACCTATGGGTCTTTGACAACCTCAGTATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190565.2 |
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| CDS-3UTR TCA 90 bp | ATACTGAGGTTGTCAAAGACCCATAGGTACCCAACACAGGAAAACAAACATTTTGGGTTTGTTGGCAGTTaGCCTAGAATGATGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: ILRLSKTHRYPTQENKHFGFVGS*PRMMAF Trigger: GAAGGCCATCATTCTAGGTCAACTGCCAACAAACCC...AAAATGTTTGTTTTCCTGTGTTGGGTACCTATGGGTCTTTGACAACCTCAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190565.2 |
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| CDS-3UTR GCA 90 bp | AAGATACTGAGGTTGTCAAAGACCCATAGGTACCCAACACAGGAAAACAAACATACCCGTGAGAAATTCTaGAGCCAACAATATTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: KILRLSKTHRYPTQENKHTREKF*SQQYSP Trigger: TGGGGAATATTGTTGGCTGCAGAATTTCTCACGGGT...ATGTTTGTTTTCCTGTGTTGGGTACCTATGGGTCTTTGACAACCTCAGTATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190565.2 |
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| CDS-3UTR CCA 90 bp | AAACAAATTTTATTGACAAAGATACTGAGGTTGTCAAAGACCCATAGGTACCCAAGCCAGAGGGGTCTCTaGAATGATGTGGAGGTTACC | + |
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Preference number: 4 (lower is better) Translates to: KQILLTKILRLSKTHRYPSQRGL*NDVEVT Trigger: GGTAACCTCCACATCATTCCAGAGACCCCTCTGGCT...TGGGTACCTATGGGTCTTTGACAACCTCAGTATCTTTGTCAATAAAATTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190565.2 |
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| CDS-3UTR GCA 90 bp | AAACAAATTTTATTGACAAAGATACTGAGGTTGTCAAAGACCCATAGGTACCCAAGGGCCTGGGAAGAATaGTTCCTCCTACTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KQILLTKILRLSKTHRYPRAWEE*FLLLFF Trigger: GAAGAAGAGTAGGAGGAAGCATTCTTCCCAGGCCCT...TGGGTACCTATGGGTCTTTGACAACCTCAGTATCTTTGTCAATAAAATTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190565.2 |
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| CDS-3UTR TCA 90 bp | ATACTGAGGTTGTCAAAGACCCATAGGTACCCAACACAGGAAAACAAACATTTTGGAAAATCTACTTTGTaGGGCAAGACCTTAAGATTT | + |
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Preference number: 4 (lower is better) Translates to: ILRLSKTHRYPTQENKHFGKSTL*GKTLRF Trigger: AAATCTTAAGGTCTTGCCTCACAAAGTAGATTTTCC...AAAATGTTTGTTTTCCTGTGTTGGGTACCTATGGGTCTTTGACAACCTCAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190565.2 |
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| CDS TCA 90 bp | CATTGTCATCACCTGATCTCACCCCAGCCAGAGGGGTCTCTGGAATaGTGTGGAGGTTACCTTCCTTGTAGTCATCCAGGAGCTGATAGA | + |
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Preference number: 5 (lower is better) Translates to: HCHHLISPQPEGSLE*CGGYLPCSHPGADR Trigger: TCTATCAGCTCCTGGATGACTACAAGGAAGGTAACCTCCACATCATTCCAGAGACCCCTCTGGCTGGGGTGAGATCAGGTGATGACAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179136.2 ENSMUST00000190565.2 |
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| CDS-3UTR CAA 90 bp | ATACTGAGGTTGTCAAAGACCCATAGGTACCCAACACAGGAAAACAAACATTTTCCCCTCAAATTTGTGTaGTACCTCTCTGCCAACCAG | + |
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Preference number: 5 (lower is better) Translates to: ILRLSKTHRYPTQENKHFPLKFV*YLSANQ Trigger: CTGGTTGGCAGAGAGGTACAACACAAATTTGAGGGG...AAAATGTTTGTTTTCCTGTGTTGGGTACCTATGGGTCTTTGACAACCTCAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190565.2 |
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| CDS-3UTR CAA 90 bp | AAACAAATTTTATTGACAAAGATACTGAGGTTGTCAAAGACCCATAGGTACCCAACCATCCCACTCCAGTaGTCCTCAGAGCCATCTTTC | + |
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Preference number: 5 (lower is better) Translates to: KQILLTKILRLSKTHRYPTIPLQ*SSEPSF Trigger: GAAAGATGGCTCTGAGGACAACTGGAGTGGGATGGT...TGGGTACCTATGGGTCTTTGACAACCTCAGTATCTTTGTCAATAAAATTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190565.2 |
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| CDS CCA 90 bp | GAACTTTGTAAACAACCTTTCCGAACTTTTTGGATCCATCATCTCTaGTGTACTGCACCCAGGAACCTATTAAGAAGTCATTGTCATCAC | + |
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Preference number: 5 (lower is better) Translates to: ELCKQPFRTFWIHHL*CTAPRNLLRSHCHH Trigger: GTGATGACAATGACTTCTTAATAGGTTCCTGGGTGCAGTACACCAGAGATGATGGATCCAAAAAGTTCGGAAAGGTTGTTTACAAAGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179136.2 ENSMUST00000190565.2 |
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| CDS-3UTR CAA 90 bp | ATACTGAGGTTGTCAAAGACCCATAGGTACCCAACACAGGAAAACAAACATTTTTCTTTCCCCTCAAATTaGTGTTGTACCTCTCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: ILRLSKTHRYPTQENKHFSFPSN*CCTSLP Trigger: TGGCAGAGAGGTACAACACAAATTTGAGGGGAAAGA...AAAATGTTTGTTTTCCTGTGTTGGGTACCTATGGGTCTTTGACAACCTCAGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000190565.2 |
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| CDS-3UTR CAA 90 bp | AAACAAATTTTATTGACAAAGATACTGAGGTTGTCAAAGACCCATAGGTACCCAACCTTTCCGAACTTTTaGGATCCATCATCTCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: KQILLTKILRLSKTHRYPTFPNF*DPSSLV Trigger: CACCAGAGATGATGGATCCAAAAAGTTCGGAAAGGT...TGGGTACCTATGGGTCTTTGACAACCTCAGTATCTTTGTCAATAAAATTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190565.2 |
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| CDS-3UTR CAA 90 bp | ATACTGAGGTTGTCAAAGACCCATAGGTACCCAACACAGGAAAACAAACATTTTAGGTCACCGAGAAATTaGATAAAGTACACAGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: ILRLSKTHRYPTQENKHFRSPRN*IKYTVG Trigger: TCCTACTGTGTACTTTATCAAATTTCTCGGTGACCT...AAAATGTTTGTTTTCCTGTGTTGGGTACCTATGGGTCTTTGACAACCTCAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190565.2 |
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| CDS-3UTR CAA 90 bp | AAACAAATTTTATTGACAAAGATACTGAGGTTGTCAAAGACCCATAGGTACCCAAATAAAGAGAAGGGTTaGTTGGCAGTTGACCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: KQILLTKILRLSKTHRYPNKEKG*LAVDLE Trigger: TTCTAGGTCAACTGCCAACAAACCCTTCTCTTTATT...TGGGTACCTATGGGTCTTTGACAACCTCAGTATCTTTGTCAATAAAATTTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190565.2 |
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| CDS GCA 72 bp | AGCCATCTTTCCCCTCAAATTTGTGTTGTACCTCTCTaGCAACCAGTGCGCCTGCGAGGTGGACCTCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SHLSPQICVVPL*QPVRLRGGPPS Trigger: TGAGGGAGGTCCACCTCGCAGGCGCACTGGTTGGCAGAGAGGTACAACACAAATTTGAGGGGAAAGATGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179136.2 ENSMUST00000190565.2 |
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| CDS TCA 72 bp | CACCTGATCTCACCCCAGCCAGAGGGGTCTCTGGAATaGTGTGGAGGTTACCTTCCTTGTAGTCATCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: HLISPQPEGSLE*CGGYLPCSHPG Trigger: TCCTGGATGACTACAAGGAAGGTAACCTCCACATCATTCCAGAGACCCCTCTGGCTGGGGTGAGATCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179136.2 ENSMUST00000190565.2 |
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| CDS CAA 72 bp | GTTGTCCTCAGAGCCATCTTTCCCCTCAAATTTGTGTaGTACCTCTCTGCCAACCAGTGCGCCTGCGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VVLRAIFPLKFV*YLSANQCACEV Trigger: CACCTCGCAGGCGCACTGGTTGGCAGAGAGGTACAACACAAATTTGAGGGGAAAGATGGCTCTGAGGACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179136.2 ENSMUST00000190565.2 |
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| CDS CAA 72 bp | CTCCAGTTGTCCTCAGAGCCATCTTTCCCCTCAAATTaGTGTTGTACCTCTCTGCCAACCAGTGCGCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: LQLSSEPSFPSN*CCTSLPTSAPA Trigger: CGCAGGCGCACTGGTTGGCAGAGAGGTACAACACAAATTTGAGGGGAAAGATGGCTCTGAGGACAACTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179136.2 ENSMUST00000190565.2 |
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| CDS CAA 72 bp | CTGGTGTACTGCACCCAGGAACCTATTAAGAAGTCATaGTCATCACCTGATCTCACCCCAGCCAGAGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LVYCTQEPIKKS*SSPDLTPARGV Trigger: GACCCCTCTGGCTGGGGTGAGATCAGGTGATGACAATGACTTCTTAATAGGTTCCTGGGTGCAGTACACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179136.2 ENSMUST00000190565.2 |
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| CDS CAA 90 bp | CCATCATCTCTGGTGTACTGCACCCAGGAACCTATTAAGAAGTCATaGTCATCACCTGATCTCACCCCAGCCAGAGGGGTCTCTGGAATG | + |
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Preference number: 6 (lower is better) Translates to: PSSLVYCTQEPIKKS*SSPDLTPARGVSGM Trigger: CATTCCAGAGACCCCTCTGGCTGGGGTGAGATCAGGTGATGACAATGACTTCTTAATAGGTTCCTGGGTGCAGTACACCAGAGATGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179136.2 ENSMUST00000190565.2 |
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| CDS CAA 72 bp | AAGAATGGCACCTGGGCTAGCACCATCCCACTCCAGTaGTCCTCAGAGCCATCTTTCCCCTCAAATTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: KNGTWASTIPLQ*SSEPSFPSNLC Trigger: ACACAAATTTGAGGGGAAAGATGGCTCTGAGGACAACTGGAGTGGGATGGTGCTAGCCCAGGTGCCATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179136.2 ENSMUST00000190565.2 |
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| CDS CCA 72 bp | TGGCTAGAACTTTGTAAACAACCTTTCCGAACTTTTTaGATCCATCATCTCTGGTGTACTGCACCCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: WLELCKQPFRTF*IHHLWCTAPRN Trigger: GTTCCTGGGTGCAGTACACCAGAGATGATGGATCCAAAAAGTTCGGAAAGGTTGTTTACAAAGTTCTAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179136.2 ENSMUST00000190565.2 |
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| CDS GCA 72 bp | TTTCCGAACTTTTTGGATCCATCATCTCTGGTGTACTaGACCCAGGAACCTATTAAGAAGTCATTGTCATCA | + |
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Preference number: 6 (lower is better) Translates to: FPNFLDPSSLVY*TQEPIKKSLSS Trigger: TGATGACAATGACTTCTTAATAGGTTCCTGGGTGCAGTACACCAGAGATGATGGATCCAAAAAGTTCGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179136.2 ENSMUST00000190565.2 |
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| CDS CCA 72 bp | AAACAACCTTTCCGAACTTTTTGGATCCATCATCTCTaGTGTACTGCACCCAGGAACCTATTAAGAAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: KQPFRTFWIHHL*CTAPRNLLRSH Trigger: ATGACTTCTTAATAGGTTCCTGGGTGCAGTACACCAGAGATGATGGATCCAAAAAGTTCGGAAAGGTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179136.2 ENSMUST00000190565.2 |
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