Pregenerated sensors for SSTY1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095267Ensembl transcript IDs: ENSMUST00000180056.2, ENSMUST00000186035.2
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CAAAACACATTTTATTGGCAAAGATACTGGGATTATCAAAGACCCTTATGTAGCATCACTGTCATCTCCTaGTCTCTCCTCAGCCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QNTFYWQRYWDYQRPLCSITVIS*SLLSRR Trigger: CCTCCGGCTGAGGAGAGATCAGGAGATGACAGTGAT...GCTACATAAGGGTCTTTGATAATCCCAGTATCTTTGCCAATAAAATGTGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186035.2 |
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| CDS-3UTR CCA 90 bp | CAAAACACATTTTATTGGCAAAGATACTGGGATTATCAAAGACCCTTATGTAGCAGCCGGAGGAGTGTCTaGAATCATGTGGAGGTTACC | + |
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Preference number: 4 (lower is better) Translates to: QNTFYWQRYWDYQRPLCSSRRSV*NHVEVT Trigger: GGTAACCTCCACATGATTCCAGACACTCCTCCGGCT...GCTACATAAGGGTCTTTGATAATCCCAGTATCTTTGCCAATAAAATGTGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186035.2 |
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| CDS-3UTR CCA 90 bp | CAAAACACATTTTATTGGCAAAGATACTGGGATTATCAAAGACCCTTATGTAGCTATTCCTCAGGGTGTTaGAAGAAGACTTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QNTFYWQRYWDYQRPLCSYSSGC*KKTSSS Trigger: GGAGGAGGAAGTCTTCTTCCAACACCCTGAGGAATA...GCTACATAAGGGTCTTTGATAATCCCAGTATCTTTGCCAATAAAATGTGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186035.2 |
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| CDS-3UTR CCA 90 bp | AAAACACATTTTATTGGCAAAGATACTGGGATTATCAAAGACCCTTATGTAGCCACTATGGCCTTCCATTaGGTGACAGGCTCATTACCT | + |
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Preference number: 4 (lower is better) Translates to: KTHFIGKDTGIIKDPYVATMAFH*VTGSLP Trigger: AGGTAATGAGCCTGTCACCCAATGGAAGGCCATAGT...GGCTACATAAGGGTCTTTGATAATCCCAGTATCTTTGCCAATAAAATGTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186035.2 |
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| CDS-3UTR TCA 90 bp | CAAAACACATTTTATTGGCAAAGATACTGGGATTATCAAAGACCCTTATGTAGCGAGAAATTCTGCAGCTaGCAATATTCCTCAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: QNTFYWQRYWDYQRPLCSEKFCS*QYSSGC Trigger: ACACCCTGAGGAATATTGTCAGCTGCAGAATTTCTC...GCTACATAAGGGTCTTTGATAATCCCAGTATCTTTGCCAATAAAATGTGTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186035.2 |
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| CDS-3UTR TCA 90 bp | AAAACACATTTTATTGGCAAAGATACTGGGATTATCAAAGACCCTTATGTAGCCAAAACAAATCCTTCATaGTTGGCACCTGGGCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: KTHFIGKDTGIIKDPYVAKTNPS*LAPGLA Trigger: TGCTAGCCCAGGTGCCAATCATGAAGGATTTGTTTT...GGCTACATAAGGGTCTTTGATAATCCCAGTATCTTTGCCAATAAAATGTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186035.2 |
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| CDS-3UTR CCA 90 bp | CAAAACACATTTTATTGGCAAAGATACTGGGATTATCAAAGACCCTTATGTAGCTGGAACCATCTTTTCTaGTGTACTCCACCCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QNTFYWQRYWDYQRPLCSWNHLF*CTPPSY Trigger: GTAACTGGGTGGAGTACACCAGAAAAGATGGTTCCA...GCTACATAAGGGTCTTTGATAATCCCAGTATCTTTGCCAATAAAATGTGTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186035.2 |
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| CDS-3UTR CCA 90 bp | AAAACACATTTTATTGGCAAAGATACTGGGATTATCAAAGACCCTTATGTAGCCCCTTTCCGAACTTTTTaGAACCATCTTTTCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: KTHFIGKDTGIIKDPYVAPFRTF*NHLFWC Trigger: ACACCAGAAAAGATGGTTCCAAAAAGTTCGGAAAGG...GGCTACATAAGGGTCTTTGATAATCCCAGTATCTTTGCCAATAAAATGTGTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000186035.2 |
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| CDS-3UTR TCA 90 bp | AAAACACATTTTATTGGCAAAGATACTGGGATTATCAAAGACCCTTATGTAGCCATATGGATGTCACCATaGAACTTGATAAAGTACACG | + |
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Preference number: 4 (lower is better) Translates to: KTHFIGKDTGIIKDPYVAIWMSP*NLIKYT Trigger: CGTGTACTTTATCAAGTTTCATGGTGACATCCATAT...GGCTACATAAGGGTCTTTGATAATCCCAGTATCTTTGCCAATAAAATGTGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186035.2 |
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| CDS TCA 90 bp | ACCGCTCTGCCAACCAGGGCTCTGGCGAGGTGGGCATCCCTCACCTaGGGAAATACTACTATGGGAGGCAAAACCTTAAGGTTTAAAATC | + |
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Preference number: 5 (lower is better) Translates to: TALPTRALARWASLT*GNTTMGGKTLRFKI Trigger: GATTTTAAACCTTAAGGTTTTGCCTCCCATAGTAGTATTTCCTCAGGTGAGGGATGCCCACCTCGCCAGAGCCCTGGTTGGCAGAGCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180056.2 ENSMUST00000186035.2 |
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| CDS CCA 90 bp | CGGAAGGATTGGCTAGAACTTGGTAAACAACCTTTCCGAACTTTTTaGAACCATCTTTTCTGGTGTACTCCACCCAGTTACCAATCAACA | + |
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Preference number: 5 (lower is better) Translates to: RKDWLELGKQPFRTF*NHLFWCTPPSYQST Trigger: TGTTGATTGGTAACTGGGTGGAGTACACCAGAAAAGATGGTTCCAAAAAGTTCGGAAAGGTTGTTTACCAAGTTCTAGCCAATCCTTCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000180056.2 ENSMUST00000186035.2 |
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| CDS-3UTR CAA 90 bp | CAAAACACATTTTATTGGCAAAGATACTGGGATTATCAAAGACCCTTATGTAGCTCTTTCCTCTCAAATTaGTGTTGTACCGCTCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: QNTFYWQRYWDYQRPLCSSFLSN*CCTALP Trigger: TGGCAGAGCGGTACAACACAAATTTGAGAGGAAAGA...GCTACATAAGGGTCTTTGATAATCCCAGTATCTTTGCCAATAAAATGTGTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186035.2 |
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| CDS-3UTR CAA 90 bp | AAAACACATTTTATTGGCAAAGATACTGGGATTATCAAAGACCCTTATGTAGCCACCTTTCCGAACTTTTaGGAACCATCTTTTCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: KTHFIGKDTGIIKDPYVATFPNF*EPSFLV Trigger: CACCAGAAAAGATGGTTCCAAAAAGTTCGGAAAGGT...GGCTACATAAGGGTCTTTGATAATCCCAGTATCTTTGCCAATAAAATGTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000186035.2 |
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| CDS-3UTR CAA 90 bp | CAAAACACATTTTATTGGCAAAGATACTGGGATTATCAAAGACCCTTATGTAGCAAAGAGAAGGGTTTGTaGGCAGTTGATCTAGAACTA | + |
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Preference number: 5 (lower is better) Translates to: QNTFYWQRYWDYQRPLCSKEKGL*AVDLEL Trigger: TAGTTCTAGATCAACTGCCAACAAACCCTTCTCTTT...GCTACATAAGGGTCTTTGATAATCCCAGTATCTTTGCCAATAAAATGTGTTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186035.2 |
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| CDS-3UTR CAA 90 bp | CAAAACACATTTTATTGGCAAAGATACTGGGATTATCAAAGACCCTTATGTAGCAGTAAAGAGAAGGGTTaGTTGGCAGTTGATCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: QNTFYWQRYWDYQRPLCSSKEKG*LAVDLE Trigger: TTCTAGATCAACTGCCAACAAACCCTTCTCTTTACT...GCTACATAAGGGTCTTTGATAATCCCAGTATCTTTGCCAATAAAATGTGTTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186035.2 |
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| CDS GCA 72 bp | AGCCATCTTTCCTCTCAAATTTGTGTTGTACCGCTCTaGCAACCAGGGCTCTGGCGAGGTGGGCATCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SHLSSQICVVPL*QPGLWRGGHPS Trigger: TGAGGGATGCCCACCTCGCCAGAGCCCTGGTTGGCAGAGCGGTACAACACAAATTTGAGAGGAAAGATGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180056.2 ENSMUST00000186035.2 |
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| CDS CCA 72 bp | CAAATTTGTGTTGTACCGCTCTGCCAACCAGGGCTCTaGCGAGGTGGGCATCCCTCACCTGAGGAAATACTA | + |
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Preference number: 6 (lower is better) Translates to: QICVVPLCQPGL*RGGHPSPEEIL Trigger: TAGTATTTCCTCAGGTGAGGGATGCCCACCTCGCCAGAGCCCTGGTTGGCAGAGCGGTACAACACAAATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180056.2 ENSMUST00000186035.2 |
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| CDS CAA 72 bp | CTCCAGTTGACCTCAGAGCCATCTTTCCTCTCAAATTaGTGTTGTACCGCTCTGCCAACCAGGGCTCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: LQLTSEPSFLSN*CCTALPTRALA Trigger: CGCCAGAGCCCTGGTTGGCAGAGCGGTACAACACAAATTTGAGAGGAAAGATGGCTCTGAGGTCAACTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180056.2 ENSMUST00000186035.2 |
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| CDS TCA 72 bp | CACCCAGTTACCAATCAACACATCACTGTCATCTCCTaGTCTCTCCTCAGCCGGAGGAGTGTCTGGAATCAT | + |
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Preference number: 6 (lower is better) Translates to: HPVTNQHITVIS*SLLSRRSVWNH Trigger: ATGATTCCAGACACTCCTCCGGCTGAGGAGAGATCAGGAGATGACAGTGATGTGTTGATTGGTAACTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180056.2 ENSMUST00000186035.2 |
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| CDS CCA 72 bp | TGGCTAGAACTTGGTAAACAACCTTTCCGAACTTTTTaGAACCATCTTTTCTGGTGTACTCCACCCAGTTAC | + |
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Preference number: 6 (lower is better) Translates to: WLELGKQPFRTF*NHLFWCTPPSY Trigger: GTAACTGGGTGGAGTACACCAGAAAAGATGGTTCCAAAAAGTTCGGAAAGGTTGTTTACCAAGTTCTAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000180056.2 ENSMUST00000186035.2 |
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