Pregenerated sensors for SSTR5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050824Ensembl transcript IDs: ENSMUST00000051864.5, ENSMUST00000165183.10
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTCGAATGGTAGGTCTTTCCAGGCTCTGCTGTTTGTTCCTGCCTaGTACCTGCCCACCCTGCTCCTTCTCCAGGGACAGAGCCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: LSNGRSFQALLFVPA*YLPTLLLLQGQSPS Trigger: GCTGGGGCTCTGTCCCTGGAGAAGGAGCAGGGTGGGCAGGTAGCAGGCAGGAACAAACAGCAGAGCCTGGAAAGACCTACCATTCGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR TCA 90 bp | GCTGGGGCTGAACACACATGGATACCTTTCATTTGTCTCCCACGCTaGCCAGAACAAGGAACAGTGGCTGAGGGGCCAGCAGGCCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: AGAEHTWIPFICLPR*PEQGTVAEGPAGQH Trigger: GTGCTGGCCTGCTGGCCCCTCAGCCACTGTTCCTTGTTCTGGTCAGCGTGGGAGACAAATGAAAGGTATCCATGTGTGTTCAGCCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR CCA 90 bp | TCAATAGAACCTTCTTCACTGGGCCACTCTGCAGAGACCAGATCGTaGTGTGTCCATTCTCTTTCCAGTCTTCACCATGCGTCTGCCCCG | + |
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Preference number: 1 (lower is better) Translates to: SIEPSSLGHSAETRS*CVHSLSSLHHASAP Trigger: CGGGGCAGACGCATGGTGAAGACTGGAAAGAGAATGGACACACCACGATCTGGTCTCTGCAGAGTGGCCCAGTGAAGAAGGTTCTATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR CCA 90 bp | CATCATAAAGGCCAAGACCTTGCTTTTCCTTGTGCTGGAGAAAGATaGGAAGCAGCCAGAATAGGGCCCAAGGTTTCATCTCTGCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: HHKGQDLAFPCAGER*EAARIGPKVSSLLP Trigger: GGGCAGCAGAGATGAAACCTTGGGCCCTATTCTGGCTGCTTCCCATCTTTCTCCAGCACAAGGAAAAGCAAGGTCTTGGCCTTTATGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR TCA 90 bp | AGAGAATCATTTCTTGGCTCTCTTCTGAAAAATTGCTTCTTGGCCTaGGAGACTGACAAAAATGATGCCACAGTACGGGTGAAGGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: RESFLGSLLKNCFLA*ETDKNDATVRVKVP Trigger: AGGCACCTTCACCCGTACTGTGGCATCATTTTTGTCAGTCTCTCAGGCCAAGAAGCAATTTTTCAGAAGAGAGCCAAGAAATGATTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR TCA 90 bp | GCACACACCAATAGTCTACAAGAGAATCATTTCTTGGCTCTCTTCTaGAAAATTGCTTCTTGGCCTGAGAGACTGACAAAAATGATGCCA | + |
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Preference number: 1 (lower is better) Translates to: AHTNSLQENHFLALF*KIASWPERLTKMMP Trigger: TGGCATCATTTTTGTCAGTCTCTCAGGCCAAGAAGCAATTTTTCAGAAGAGAGCCAAGAAATGATTCTCTTGTAGACTATTGGTGTGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGACTTGGCCCTCCCTGGCACTGGCTGGCATTTGCACTCTCTCGAATGGTTCTGCCCCGCCTACCTaGTCCCATCATAAAGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: PGTWPSLALAGICTLSNGSAPPT*SHHKGQ Trigger: TTGGCCTTTATGATGGGAGCAGGTAGGCGGGGCAGA...ACCATTCGAGAGAGTGCAAATGCCAGCCAGTGCCAGGGAGGGCCAAGTCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR TCA 90 bp | GCACTCTCTCGAATGGTAGGTCTTTCCAGGCTCTGCTGTTTGTTCCTGCCTGCTACAAGGAACAGTGGCTaGGGGGCCAGCAGGCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: ALSRMVGLSRLCCLFLPATRNSG*GASRPA Trigger: TGCTGGCCTGCTGGCCCCTCAGCCACTGTTCCTTGT...AGCAGGCAGGAACAAACAGCAGAGCCTGGAAAGACCTACCATTCGAGAGAGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTGTCCATTCTCTTTCCAGTCTTCACCATGCGTCTGCCCCGCCTACCTGCAGGCCTGGGGGCGAGTaGATCTCAGCAAACTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: WCVHSLSSLHHASAPPTCRPGGE*ISANSH Trigger: ATGAGAGTTTGCTGAGATGCACTCGCCCCCAGGCCT...GCAGGTAGGCGGGGCAGACGCATGGTGAAGACTGGAAAGAGAATGGACACACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR TCA 90 bp | GGAACAGTGGCTGAGGGGCCAGCAGGCCAGCACAGCTTCAGGGTGGGTAATCGCAATTGCTTCTTGGCCTaGGAGACTGACAAAAATGAT | + |
|
Preference number: 2 (lower is better) Translates to: GTVAEGPAGQHSFRVGNRNCFLA*ETDKND Trigger: ATCATTTTTGTCAGTCTCTCAGGCCAAGAAGCAATT...GCGATTACCCACCCTGAAGCTGTGCTGGCCTGCTGGCCCCTCAGCCACTGTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTGTCCTCGTCGTCTCTCAGTCCCAGGGAAGCCTCAATAGAACCTTCTTCAGGCCTGGGGGCGAGTaGATCTCAGCAAACTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: LCVLVVSQSQGSLNRTFFRPGGE*ISANSH Trigger: ATGAGAGTTTGCTGAGATGCACTCGCCCCCAGGCCT...GAAGAAGGTTCTATTGAGGCTTCCCTGGGACTGAGAGACGACGAGGACACACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCTCCAGGGACAGAGCCCCAGCAACCTGCCTTAAAGAGATGGAAGGCTGTATGATCAGTCACCCATaGCTTAGCCGCAGACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SFSRDRAPATCLKEMEGCMISHP*LSRRQL Trigger: CAGCTGTCTGCGGCTAAGCCATGGGTGACTGATCAT...ACAGCCTTCCATCTCTTTAAGGCAGGTTGCTGGGGCTCTGTCCCTGGAGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR GCA 90 bp | CCCATCATAAAGGCCAAGACCTTGCTTTTCCTTGTGCTGGAGAAAGATGGGAAGCCAAGGTTTCATCTCTaGTGCCCCAGGGCCAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: PIIKAKTLLFLVLEKDGKPRFHL*CPRASA Trigger: TGCACTGGCCCTGGGGCAGCAGAGATGAAACCTTGG...CTTCCCATCTTTCTCCAGCACAAGGAAAAGCAAGGTCTTGGCCTTTATGATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTGTCCATTCTCTTTCCAGTCTTCACCATGCGTCTGCCCCGCCTACCTGCGGGGCTGAACACACATaGATACCTTTCATTTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: WCVHSLSSLHHASAPPTCGAEHT*IPFICL Trigger: GAGACAAATGAAAGGTATCCATGTGTGTTCAGCCCC...GCAGGTAGGCGGGGCAGACGCATGGTGAAGACTGGAAAGAGAATGGACACACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR CCA 90 bp | GCACTCTCTCGAATGGTAGGTCTTTCCAGGCTCTGCTGTTTGTTCCTGCCTGCTGCAGAGACCAGATCGTaGTGTGTCCATTCTCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: ALSRMVGLSRLCCLFLPAAETRS*CVHSLS Trigger: GGAAAGAGAATGGACACACCACGATCTGGTCTCTGC...AGCAGGCAGGAACAAACAGCAGAGCCTGGAAAGACCTACCATTCGAGAGAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR TCA 90 bp | TGGTGTGTCCATTCTCTTTCCAGTCTTCACCATGCGTCTGCCCCGCCTACCTGCAATTGCTTCTTGGCCTaGGAGACTGACAAAAATGAT | + |
|
Preference number: 2 (lower is better) Translates to: WCVHSLSSLHHASAPPTCNCFLA*ETDKND Trigger: ATCATTTTTGTCAGTCTCTCAGGCCAAGAAGCAATT...GCAGGTAGGCGGGGCAGACGCATGGTGAAGACTGGAAAGAGAATGGACACACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR TCA 90 bp | TCGTCGTCTCTCAGTCCCAGGGAAGCCTCAATAGAACCTTCTTCACTGGGCCACTTCTTGGCTCTCTTCTaGAAAATTGCTTCTTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SSSLSPREASIEPSSLGHFLALF*KIASWP Trigger: AGGCCAAGAAGCAATTTTTCAGAAGAGAGCCAAGAA...GTGGCCCAGTGAAGAAGGTTCTATTGAGGCTTCCCTGGGACTGAGAGACGACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR CCA 90 bp | ACTGACAAAAATGATGCCACAGTACGGGTGAAGGTGCCTGAATATTACCAGGGGATGATCAGTCACCCATaGCTTAGCCGCAGACAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TDKNDATVRVKVPEYYQGMISHP*LSRRQL Trigger: CAGCTGTCTGCGGCTAAGCCATGGGTGACTGATCAT...CCCCTGGTAATATTCAGGCACCTTCACCCGTACTGTGGCATCATTTTTGTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR TCA 90 bp | CCCATCATAAAGGCCAAGACCTTGCTTTTCCTTGTGCTGGAGAAAGATGGGAAGTTCTTGGCTCTCTTCTaGAAAATTGCTTCTTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: PIIKAKTLLFLVLEKDGKFLALF*KIASWP Trigger: AGGCCAAGAAGCAATTTTTCAGAAGAGAGCCAAGAA...CTTCCCATCTTTCTCCAGCACAAGGAAAAGCAAGGTCTTGGCCTTTATGATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR TCA 72 bp | TTGTCTCCCACGCTGACCAGAACAAGGAACAGTGGCTaGGGGGCCAGCAGGCCAGCACAGCTTCAGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSPTLTRTRNSG*GASRPAQLQGG Trigger: CCCACCCTGAAGCTGTGCTGGCCTGCTGGCCCCTCAGCCACTGTTCCTTGTTCTGGTCAGCGTGGGAGACAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR GCA 72 bp | GGTAGGTCTTTCCAGGCTCTGCTGTTTGTTCCTGCCTaGTACCTGCCCACCCTGCTCCTTCTCCAGGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: GRSFQALLFVPA*YLPTLLLLQGQ Trigger: CTGTCCCTGGAGAAGGAGCAGGGTGGGCAGGTAGCAGGCAGGAACAAACAGCAGAGCCTGGAAAGACCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR GCA 72 bp | CCAGGGACTTGGCCCTCCCTGGCACTGGCTGGCATTTaGACTCTCTCGAATGGTAGGTCTTTCCAGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: PGTWPSLALAGI*TLSNGRSFQAL Trigger: CAGAGCCTGGAAAGACCTACCATTCGAGAGAGTGCAAATGCCAGCCAGTGCCAGGGAGGGCCAAGTCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR CCA 72 bp | GCGGGATCACAGATTCCCCAGGGACTTGGCCCTCCCTaGCACTGGCTGGCATTTGCACTCTCTCGAATGGTA | + |
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Preference number: 3 (lower is better) Translates to: AGSQIPQGLGPP*HWLAFALSRMV Trigger: TACCATTCGAGAGAGTGCAAATGCCAGCCAGTGCCAGGGAGGGCCAAGTCCCTGGGGAATCTGTGATCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR CCA 72 bp | CCAGGGACAGAGCCCCAGCAACCTGCCTTAAAGAGATaGAAGGCTGTTAAGTCCCCTGTGTGTCCTCGTCGT | + |
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Preference number: 3 (lower is better) Translates to: PGTEPQQPALKR*KAVKSPVCPRR Trigger: ACGACGAGGACACACAGGGGACTTAACAGCCTTCCATCTCTTTAAGGCAGGTTGCTGGGGCTCTGTCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR CCA 72 bp | TGGCAAAATGTGGACATGGGGGCTTTGAGCACATTCTaGGTCTGGCGTAGAGAAGCTGCTGAGGCGGGATCA | + |
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Preference number: 3 (lower is better) Translates to: WQNVDMGALSTF*VWRREAAEAGS Trigger: TGATCCCGCCTCAGCAGCTTCTCTACGCCAGACCCAGAATGTGCTCAAAGCCCCCATGTCCACATTTTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR GCA 72 bp | GGGCCCAAGGTTTCATCTCTGCTGCCCCAGGGCCAGTaGATCTTTGTTAAAACTGTCGCCTCGAAGTACATG | + |
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Preference number: 3 (lower is better) Translates to: GPKVSSLLPQGQ*IFVKTVASKYM Trigger: CATGTACTTCGAGGCGACAGTTTTAACAAAGATGCACTGGCCCTGGGGCAGCAGAGATGAAACCTTGGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR GCA 72 bp | CTTTCCAGTCTTCACCATGCGTCTGCCCCGCCTACCTaGTCCCATCATAAAGGCCAAGACCTTGCTTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LSSLHHASAPPT*SHHKGQDLAFP Trigger: AGGAAAAGCAAGGTCTTGGCCTTTATGATGGGAGCAGGTAGGCGGGGCAGACGCATGGTGAAGACTGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR CCA 72 bp | AATGTGGACATGGGGGCTTTGAGCACATTCTGGGTCTaGCGTAGAGAAGCTGCTGAGGCGGGATCACAGATT | + |
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Preference number: 3 (lower is better) Translates to: NVDMGALSTFWV*RREAAEAGSQI Trigger: AATCTGTGATCCCGCCTCAGCAGCTTCTCTACGCCAGACCCAGAATGTGCTCAAAGCCCCCATGTCCACATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR TCA 72 bp | GAACACACATGGATACCTTTCATTTGTCTCCCACGCTaGCCAGAACAAGGAACAGTGGCTGAGGGGCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: EHTWIPFICLPR*PEQGTVAEGPA Trigger: TGCTGGCCCCTCAGCCACTGTTCCTTGTTCTGGTCAGCGTGGGAGACAAATGAAAGGTATCCATGTGTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR CCA 72 bp | CAGAACGTTTTGGTGAGAGAGATGATCAGTCACCCATaGCTTAGCCGCAGACAGCTGTCTTCACACTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: QNVLVREMISHP*LSRRQLSSHCH Trigger: GTGGCAGTGTGAAGACAGCTGTCTGCGGCTAAGCCATGGGTGACTGATCATCTCTCTCACCAAAACGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR CAA 90 bp | TCCTTCTCCAGGGACAGAGCCCCAGCAACCTGCCTTAAAGAGATGGAAGGCTGTCTCTCTTCTGAAAAATaGCTTCTTGGCCTGAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: SFSRDRAPATCLKEMEGCLSSEK*LLGLRD Trigger: GTCTCTCAGGCCAAGAAGCAATTTTTCAGAAGAGAG...ACAGCCTTCCATCTCTTTAAGGCAGGTTGCTGGGGCTCTGTCCCTGGAGAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR-3UTR CAA 90 bp | TGGCACTGGCTGGCATTTGCACTCTCTCGAATGGTAGGTCTTTCCAGGCTCTGCCTCTCTTCTGAAAAATaGCTTCTTGGCCTGAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: WHWLAFALSRMVGLSRLCLSSEK*LLGLRD Trigger: GTCTCTCAGGCCAAGAAGCAATTTTTCAGAAGAGAG...GCAGAGCCTGGAAAGACCTACCATTCGAGAGAGTGCAAATGCCAGCCAGTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR TCA 72 bp | TTTCTTGGCTCTCTTCTGAAAAATTGCTTCTTGGCCTaGGAGACTGACAAAAATGATGCCACAGTACGGGTG | + |
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Preference number: 3 (lower is better) Translates to: FLGSLLKNCFLA*ETDKNDATVRV Trigger: CACCCGTACTGTGGCATCATTTTTGTCAGTCTCTCAGGCCAAGAAGCAATTTTTCAGAAGAGAGCCAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| 3UTR CCA 72 bp | AACAGCTTATTTTCTAATTTATTCAGAGGCAGGTTGTaGAGCACAAGTGCCCTCATTATGAGGAATGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: NSLFSNLFRGRL*STSALIMRNEL Trigger: AAGCTCATTCCTCATAATGAGGGCACTTGTGCTCCACAACCTGCCTCTGAATAAATTAGAAAATAAGCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051864.5 |
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| 3UTR TCA 72 bp | AATAGTCTACAAGAGAATCATTTCTTGGCTCTCTTCTaGAAAATTGCTTCTTGGCCTGAGAGACTGACAAAA | + |
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Preference number: 3 (lower is better) Translates to: NSLQENHFLALF*KIASWPERLTK Trigger: TTTTGTCAGTCTCTCAGGCCAAGAAGCAATTTTTCAGAAGAGAGCCAAGAAATGATTCTCTTGTAGACTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| CDS-3UTR CCA 90 bp | GGAACAGTGGCTGAGGGGCCAGCAGGCCAGCACAGCTTCAGGGTGGGTAATCGCGTGCCCCAGCCCTCCTaGACATCCGCAAAGACCAAG | + |
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Preference number: 4 (lower is better) Translates to: GTVAEGPAGQHSFRVGNRVPQPS*TSAKTK Trigger: CTTGGTCTTTGCGGATGTCCAGGAGGGCTGGGGCAC...GCGATTACCCACCCTGAAGCTGTGCTGGCCTGCTGGCCCCTCAGCCACTGTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| CDS-3UTR TCA 90 bp | GAACAGTGGCTGAGGGGCCAGCAGGCCAGCACAGCTTCAGGGTGGGTAATCGCCACTGCTGGAAGCAGCTaGGGCATTCCAGCTAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: EQWLRGQQASTASGWVIATAGSS*GIPARC Trigger: ACACCTAGCTGGAATGCCTCAGCTGCTTCCAGCAGT...GGCGATTACCCACCCTGAAGCTGTGCTGGCCTGCTGGCCCCTCAGCCACTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| CDS-3UTR GCA 90 bp | TGGTGTGTCCATTCTCTTTCCAGTCTTCACCATGCGTCTGCCCCGCCTACCTGCCTGGCCAGCTCAGGTTaGAGGTGCCCCAGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: WCVHSLSSLHHASAPPTCLASSG*RCPSPP Trigger: AGGAGGGCTGGGGCACCTGCAACCTGAGCTGGCCAG...GCAGGTAGGCGGGGCAGACGCATGGTGAAGACTGGAAAGAGAATGGACACACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| CDS-3UTR GCA 90 bp | GGTGTGTCCATTCTCTTTCCAGTCTTCACCATGCGTCTGCCCCGCCTACCTGCTCTGGCCAGCTCAGGTTaGAGGTGCCCCAGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GVSILFPVFTMRLPRLPALASSG*RCPSPP Trigger: AGGAGGGCTGGGGCACCTGCAACCTGAGCTGGCCAG...AGCAGGTAGGCGGGGCAGACGCATGGTGAAGACTGGAAAGAGAATGGACACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| CDS-3UTR GCA 90 bp | GAACAGTGGCTGAGGGGCCAGCAGGCCAGCACAGCTTCAGGGTGGGTAATCGCCGTAAGTGATGAAGGCTaGACCCCACAGTCCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: EQWLRGQQASTASGWVIAVSDEG*TPQSHR Trigger: CCTGTGGGACTGTGGGGTGCAGCCTTCATCACTTAC...GGCGATTACCCACCCTGAAGCTGTGCTGGCCTGCTGGCCCCTCAGCCACTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| CDS-3UTR TCA 90 bp | CCAGGGACTTGGCCCTCCCTGGCACTGGCTGGCATTTGCACTCTCTCGAATGGTAGAGCGGCAGAGACATaGGCAGCGAGAAGACCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PGTWPSLALAGICTLSNGRAAET*AARRPR Trigger: TCTGGGTCTTCTCGCTGCTCATGTCTCTGCCGCTCT...ACCATTCGAGAGAGTGCAAATGCCAGCCAGTGCCAGGGAGGGCCAAGTCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| CDS-3UTR TCA 90 bp | TCGTCGTCTCTCAGTCCCAGGGAAGCCTCAATAGAACCTTCTTCACTGGGCCACGCCTGCTGGTCTGCATaGGCCCGTTGGCCTCACAGC | + |
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Preference number: 4 (lower is better) Translates to: SSSLSPREASIEPSSLGHACWSA*ARWPHS Trigger: GCTGTGAGGCCAACGGGCTCATGCAGACCAGCAGGC...GTGGCCCAGTGAAGAAGGTTCTATTGAGGCTTCCCTGGGACTGAGAGACGACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| CDS-3UTR CCA 90 bp | GGTGTGTCCATTCTCTTTCCAGTCTTCACCATGCGTCTGCCCCGCCTACCTGCTTGCGTGTGGGCAGTGTaGTCTGTGGCCGCCCACTCT | + |
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Preference number: 4 (lower is better) Translates to: GVSILFPVFTMRLPRLPACVWAV*SVAAHS Trigger: AGAGTGGGCGGCCACAGACCACACTGCCCACACGCA...AGCAGGTAGGCGGGGCAGACGCATGGTGAAGACTGGAAAGAGAATGGACACACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| CDS-3UTR TCA 90 bp | GCACTCTCTCGAATGGTAGGTCTTTCCAGGCTCTGCTGTTTGTTCCTGCCTGCTGCCTGCTGGTCTGCATaGGCCCGTTGGCCTCACAGC | + |
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Preference number: 4 (lower is better) Translates to: ALSRMVGLSRLCCLFLPAACWSA*ARWPHS Trigger: GCTGTGAGGCCAACGGGCTCATGCAGACCAGCAGGC...AGCAGGCAGGAACAAACAGCAGAGCCTGGAAAGACCTACCATTCGAGAGAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| CDS-3UTR CCA 90 bp | TGGCACTGGCTGGCATTTGCACTCTCTCGAATGGTAGGTCTTTCCAGGCTCTGCGGGCAGTGTGGTCTGTaGCCGCCCACTCTTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: WHWLAFALSRMVGLSRLCGQCGL*PPTLVW Trigger: CCAGACAAGAGTGGGCGGCCACAGACCACACTGCCC...GCAGAGCCTGGAAAGACCTACCATTCGAGAGAGTGCAAATGCCAGCCAGTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
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| CDS-3UTR TCA 90 bp | GCACTCTCTCGAATGGTAGGTCTTTCCAGGCTCTGCTGTTTGTTCCTGCCTGCTTGCCGTCCAGCGTCATaGCCAGGCGGCACAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALSRMVGLSRLCCLFLPACRPAS*PGGTRR Trigger: CCTTCTTGTGCCGCCTGGTCATGACGCTGGACGGCA...AGCAGGCAGGAACAAACAGCAGAGCCTGGAAAGACCTACCATTCGAGAGAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR TCA 90 bp | TGGTGTGTCCATTCTCTTTCCAGTCTTCACCATGCGTCTGCCCCGCCTACCTGCAGAGCGGCAGAGACATaGGCAGCGAGAAGACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WCVHSLSSLHHASAPPTCRAAET*AARRPR Trigger: TCTGGGTCTTCTCGCTGCTCATGTCTCTGCCGCTCT...GCAGGTAGGCGGGGCAGACGCATGGTGAAGACTGGAAAGAGAATGGACACACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CCA 90 bp | GCACTCTCTCGAATGGTAGGTCTTTCCAGGCTCTGCTGTTTGTTCCTGCCTGCTCCTCACAGCTGCGTGTaGGCAGTGTGGTCTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALSRMVGLSRLCCLFLPAPHSCV*AVWSVA Trigger: GGCCACAGACCACACTGCCCACACGCAGCTGTGAGG...AGCAGGCAGGAACAAACAGCAGAGCCTGGAAAGACCTACCATTCGAGAGAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR GCA 90 bp | CCAGGGACTTGGCCCTCCCTGGCACTGGCTGGCATTTGCACTCTCTCGAATGGTACCAGTTATGGCTACTaGTGGAAGCAGCTGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGTWPSLALAGICTLSNGTSYGY*WKQLRH Trigger: ATGCCTCAGCTGCTTCCAGCAGTAGCCATAACTGGT...ACCATTCGAGAGAGTGCAAATGCCAGCCAGTGCCAGGGAGGGCCAAGTCCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CCA 90 bp | TCCTTCTCCAGGGACAGAGCCCCAGCAACCTGCCTTAAAGAGATGGAAGGCTGTCTGGCCGTGGCTCTATaGCATCTGCATCCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SFSRDRAPATCLKEMEGCLAVAL*HLHPPH Trigger: GTGTGGAGGATGCAGATGCCATAGAGCCACGGCCAG...ACAGCCTTCCATCTCTTTAAGGCAGGTTGCTGGGGCTCTGTCCCTGGAGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CCA 90 bp | AGGTTTCATCTCTGCTGCCCCAGGGCCAGTGCATCTTTGTTAAAACTGTCGCCTTGCGTGTGGGCAGTGTaGTCTGTGGCCGCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFHLCCPRASASLLKLSPCVWAV*SVAAHS Trigger: AGAGTGGGCGGCCACAGACCACACTGCCCACACGCA...AGGCGACAGTTTTAACAAAGATGCACTGGCCCTGGGGCAGCAGAGATGAAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR TCA 90 bp | GGTGTGTCCATTCTCTTTCCAGTCTTCACCATGCGTCTGCCCCGCCTACCTGCTAGCGGTCGACACTCATaGCCATCAGGCAGAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: GVSILFPVFTMRLPRLPASGRHS*PSGRRY Trigger: GTATCTTCTGCCTGATGGTCATGAGTGTCGACCGCT...AGCAGGTAGGCGGGGCAGACGCATGGTGAAGACTGGAAAGAGAATGGACACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CCA 90 bp | CTGTGTGTCCTCGTCGTCTCTCAGTCCCAGGGAAGCCTCAATAGAACCTTCTTCCTGGCCGTGGCTCTATaGCATCTGCATCCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LCVLVVSQSQGSLNRTFFLAVAL*HLHPPH Trigger: GTGTGGAGGATGCAGATGCCATAGAGCCACGGCCAG...GAAGAAGGTTCTATTGAGGCTTCCCTGGGACTGAGAGACGACGAGGACACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR TCA 90 bp | GCACTCTCTCGAATGGTAGGTCTTTCCAGGCTCTGCTGTTTGTTCCTGCCTGCTACTGCTGGAAGCAGCTaGGGCATTCCAGCTAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALSRMVGLSRLCCLFLPATAGSS*GIPARC Trigger: ACACCTAGCTGGAATGCCTCAGCTGCTTCCAGCAGT...AGCAGGCAGGAACAAACAGCAGAGCCTGGAAAGACCTACCATTCGAGAGAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR TCA 90 bp | CCCATCATAAAGGCCAAGACCTTGCTTTTCCTTGTGCTGGAGAAAGATGGGAAGTGCCGTCCAGCGTCATaGCCAGGCGGCACAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PIIKAKTLLFLVLEKDGKCRPAS*PGGTRR Trigger: CCTTCTTGTGCCGCCTGGTCATGACGCTGGACGGCA...CTTCCCATCTTTCTCCAGCACAAGGAAAAGCAAGGTCTTGGCCTTTATGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCATCTCTGCTGCCCCAGGGCCAGTGCATCTTTGTTAAAACTGTCGCCTCAAAGCCTGCTGGTCTaGATGAGCCCGTTGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RFHLCCPRASASLLKLSPQSLLV*MSPLAS Trigger: TGAGGCCAACGGGCTCATGCAGACCAGCAGGCTTTG...AGGCGACAGTTTTAACAAAGATGCACTGGCCCTGGGGCAGCAGAGATGAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CCA 90 bp | ACTGACAAAAATGATGCCACAGTACGGGTGAAGGTGCCTGAATATTACCAGGGGGGGCAGTGTGGTCTGTaGCCGCCCACTCTTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDKNDATVRVKVPEYYQGGQCGL*PPTLVW Trigger: CCAGACAAGAGTGGGCGGCCACAGACCACACTGCCC...CCCCTGGTAATATTCAGGCACCTTCACCCGTACTGTGGCATCATTTTTGTCAGT 54% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CCA 90 bp | ACTGACAAAAATGATGCCACAGTACGGGTGAAGGTGCCTGAATATTACCAGGGGCCTCACAGCTGCGTGTaGGCAGTGTGGTCTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TDKNDATVRVKVPEYYQGPHSCV*AVWSVA Trigger: GGCCACAGACCACACTGCCCACACGCAGCTGTGAGG...CCCCTGGTAATATTCAGGCACCTTCACCCGTACTGTGGCATCATTTTTGTCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| 3UTR CAA 72 bp | CCCCGCCTACCTGCTCCCATCATAAAGGCCAAGACCTaGCTTTTCCTTGTGCTGGAGAAAGATGGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRLPAPIIKAKT*LFLVLEKDGKQ Trigger: CTGCTTCCCATCTTTCTCCAGCACAAGGAAAAGCAAGGTCTTGGCCTTTATGATGGGAGCAGGTAGGCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR GCA 90 bp | TGGCACTGGCTGGCATTTGCACTCTCTCGAATGGTAGGTCTTTCCAGGCTCTGCACCAGTTATGGCTACTaGTGGAAGCAGCTGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WHWLAFALSRMVGLSRLCTSYGY*WKQLRH Trigger: ATGCCTCAGCTGCTTCCAGCAGTAGCCATAACTGGT...GCAGAGCCTGGAAAGACCTACCATTCGAGAGAGTGCAAATGCCAGCCAGTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCATCTCTGCTGCCCCAGGGCCAGTGCATCTTTGTTAAAACTGTCGCCTGTAAGTGATGAAGGCTaGACCCCACAGTCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RFHLCCPRASASLLKLSPVSDEG*TPQSHR Trigger: CCTGTGGGACTGTGGGGTGCAGCCTTCATCACTTAC...AGGCGACAGTTTTAACAAAGATGCACTGGCCCTGGGGCAGCAGAGATGAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CCA 90 bp | TGGCACTGGCTGGCATTTGCACTCTCTCGAATGGTAGGTCTTTCCAGGCTCTGCAAGATACTGGTGAACTaGTTGATGCCGTCCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: WHWLAFALSRMVGLSRLCKILVN*LMPSSV Trigger: GACGCTGGACGGCATCAACCAGTTCACCAGTATCTT...GCAGAGCCTGGAAAGACCTACCATTCGAGAGAGTGCAAATGCCAGCCAGTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CCA 90 bp | CTGTGTGTCCTCGTCGTCTCTCAGTCCCAGGGAAGCCTCAATAGAACCTTCTTCAAGATACTGGTGAACTaGTTGATGCCGTCCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCVLVVSQSQGSLNRTFFKILVN*LMPSSV Trigger: GACGCTGGACGGCATCAACCAGTTCACCAGTATCTT...GAAGAAGGTTCTATTGAGGCTTCCCTGGGACTGAGAGACGACGAGGACACACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR TCA 90 bp | TCGTCGTCTCTCAGTCCCAGGGAAGCCTCAATAGAACCTTCTTCACTGGGCCACTCACCTTCACTACGATaGGCAAATAGCACAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLSPREASIEPSSLGHSPSLR*ANSTSR Trigger: TCTGCTTGTGCTATTTGCTCATCGTAGTGAAGGTGA...GTGGCCCAGTGAAGAAGGTTCTATTGAGGCTTCCCTGGGACTGAGAGACGACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| 3UTR CAA 72 bp | AGGTTTCATCTCTGCTGCCCCAGGGCCAGTGCATCTTaGTTAAAACTGTCGCCTCGAAGTACATGTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RFHLCCPRASAS*LKLSPRSTCSC Trigger: GCAGCTACATGTACTTCGAGGCGACAGTTTTAACAAAGATGCACTGGCCCTGGGGCAGCAGAGATGAAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR TCA 90 bp | CTGTGTGTCCTCGTCGTCTCTCAGTCCCAGGGAAGCCTCAATAGAACCTTCTTCTCACCTTCACTACGATaGGCAAATAGCACAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCVLVVSQSQGSLNRTFFSPSLR*ANSTSR Trigger: TCTGCTTGTGCTATTTGCTCATCGTAGTGAAGGTGA...GAAGAAGGTTCTATTGAGGCTTCCCTGGGACTGAGAGACGACGAGGACACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR GCA 90 bp | ACTGACAAAAATGATGCCACAGTACGGGTGAAGGTGCCTGAATATTACCAGGGGGACAGCATTCTGCGTTaGCAGGAAAGGAAGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TDKNDATVRVKVPEYYQGDSILR*QERKPQ Trigger: TTGGGGCTTCCTTTCCTGGCAACGCAGAATGCTGTC...CCCCTGGTAATATTCAGGCACCTTCACCCGTACTGTGGCATCATTTTTGTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CCA 90 bp | CCCATCATAAAGGCCAAGACCTTGCTTTTCCTTGTGCTGGAGAAAGATGGGAAGAGTTATGGCTACTGCTaGAAGCAGCTGAGGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PIIKAKTLLFLVLEKDGKSYGYC*KQLRHS Trigger: GGAATGCCTCAGCTGCTTCCAGCAGTAGCCATAACT...CTTCCCATCTTTCTCCAGCACAAGGAAAAGCAAGGTCTTGGCCTTTATGATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CCA 90 bp | ACTGACAAAAATGATGCCACAGTACGGGTGAAGGTGCCTGAATATTACCAGGGGAGTTATGGCTACTGCTaGAAGCAGCTGAGGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: TDKNDATVRVKVPEYYQGSYGYC*KQLRHS Trigger: GGAATGCCTCAGCTGCTTCCAGCAGTAGCCATAACT...CCCCTGGTAATATTCAGGCACCTTCACCCGTACTGTGGCATCATTTTTGTCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CAA 90 bp | GAACAGTGGCTGAGGGGCCAGCAGGCCAGCACAGCTTCAGGGTGGGTAATCGCCTCTGGCCAGCTCAGGTaGCAGGTGCCCCAGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EQWLRGQQASTASGWVIASGQLR*QVPQPS Trigger: GGAGGGCTGGGGCACCTGCAACCTGAGCTGGCCAGA...GGCGATTACCCACCCTGAAGCTGTGCTGGCCTGCTGGCCCCTCAGCCACTGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS CCA 90 bp | AGACGTGTAAGTGATGAAGGCTGCACCCCACAGTCCCACAGGCTCTaGCCAGCTCAGGTTGCAGGTGCCCCAGCCCTCCTGGACATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RRVSDEGCTPQSHRL*PAQVAGAPALLDIR Trigger: GCGGATGTCCAGGAGGGCTGGGGCACCTGCAACCTGAGCTGGCCAGAGCCTGTGGGACTGTGGGGTGCAGCCTTCATCACTTACACGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CAA 90 bp | GGTGTGTCCATTCTCTTTCCAGTCTTCACCATGCGTCTGCCCCGCCTACCTGCTTCTGGCCAGCTCAGGTaGCAGGTGCCCCAGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVSILFPVFTMRLPRLPASGQLR*QVPQPS Trigger: GGAGGGCTGGGGCACCTGCAACCTGAGCTGGCCAGA...AGCAGGTAGGCGGGGCAGACGCATGGTGAAGACTGGAAAGAGAATGGACACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS CCA 90 bp | ATACCAACAAGTAGAGCACAGGCACTAATACCGCCCGGGCTCCCATaGGTGACACCGGGTCCACTAGTGACCAGTTATGGCTACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IPTSRAQALIPPGLP*VTPGPLVTSYGYCW Trigger: CCAGCAGTAGCCATAACTGGTCACTAGTGGACCCGGTGTCACCCATGGGAGCCCGGGCGGTATTAGTGCCTGTGCTCTACTTGTTGGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS GCA 90 bp | GCACAAGAAGGAGCCAAAGGGCCAGTAGGAGACAGCATTCTGCGTTaGCAGGAAAGGAAGCCCCAACATAAACAACACGTCAGCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: AQEGAKGPVGDSILR*QERKPQHKQHVSHG Trigger: GCCGTGGCTGACGTGTTGTTTATGTTGGGGCTTCCTTTCCTGGCAACGCAGAATGCTGTCTCCTACTGGCCCTTTGGCTCCTTCTTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CAA 90 bp | GGTGTGTCCATTCTCTTTCCAGTCTTCACCATGCGTCTGCCCCGCCTACCTGCTGCCAGGTTGACGATGTaGACGATGAAGAAAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVSILFPVFTMRLPRLPAARLTM*TMKKGS Trigger: GCTGCCTTTCTTCATCGTCAACATCGTCAACCTGGC...AGCAGGTAGGCGGGGCAGACGCATGGTGAAGACTGGAAAGAGAATGGACACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CAA 90 bp | TGGCACTGGCTGGCATTTGCACTCTCTCGAATGGTAGGTCTTTCCAGGCTCTGCAGCGTGAAGGCCAGGTaGACGATGTTGACGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WHWLAFALSRMVGLSRLCSVKAR*TMLTMK Trigger: CTTCATCGTCAACATCGTCAACCTGGCCTTCACGCT...GCAGAGCCTGGAAAGACCTACCATTCGAGAGAGTGCAAATGCCAGCCAGTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS-3UTR CAA 90 bp | AGGTTTCATCTCTGCTGCCCCAGGGCCAGTGCATCTTTGTTAAAACTGTCGCCTGCCAGGTTGACGATGTaGACGATGAAGAAAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFHLCCPRASASLLKLSPARLTM*TMKKGS Trigger: GCTGCCTTTCTTCATCGTCAACATCGTCAACCTGGC...AGGCGACAGTTTTAACAAAGATGCACTGGCCCTGGGGCAGCAGAGATGAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS CAA 72 bp | AGCAGCGAGAAGACCCAGACGGCAGCACTAGCCAGCTaGGCTACCCGTGGGCGACGCCACCGGGCTGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SSEKTQTAALAS*ATRGRRHRAER Trigger: CCGCTCAGCCCGGTGGCGTCGCCCACGGGTAGCCAAGCTGGCTAGTGCTGCCGTCTGGGTCTTCTCGCTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS CAA 90 bp | AGAGACATGAGCAGCGAGAAGACCCAGACGGCAGCACTAGCCAGCTaGGCTACCCGTGGGCGACGCCACCGGGCTGAGCGGAGAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RDMSSEKTQTAALAS*ATRGRRHRAERRGW Trigger: CCACCCTCTCCGCTCAGCCCGGTGGCGTCGCCCACGGGTAGCCAAGCTGGCTAGTGCTGCCGTCTGGGTCTTCTCGCTGCTCATGTCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS CCA 72 bp | AGTGATGAAGGCTGCACCCCACAGTCCCACAGGCTCTaGCCAGCTCAGGTTGCAGGTGCCCCAGCCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SDEGCTPQSHRL*PAQVAGAPALL Trigger: CAGGAGGGCTGGGGCACCTGCAACCTGAGCTGGCCAGAGCCTGTGGGACTGTGGGGTGCAGCCTTCATCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS CCA 72 bp | GTTGGCCTCACAGCTGCGTGTGGGCAGTGTGGTCTGTaGCCGCCCACTCTTGTCTGGCCGTGGCTCTATGGC | + |
|
Preference number: 6 (lower is better) Translates to: VGLTAACGQCGL*PPTLVWPWLYG Trigger: GCCATAGAGCCACGGCCAGACAAGAGTGGGCGGCCACAGACCACACTGCCCACACGCAGCTGTGAGGCCAAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS CAA 72 bp | CTGCGTGTGGGCAGTGTGGTCTGTGGCCGCCCACTCTaGTCTGGCCGTGGCTCTATGGCATCTGCATCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRVGSVVCGRPL*SGRGSMASASS Trigger: GGAGGATGCAGATGCCATAGAGCCACGGCCAGACAAGAGTGGGCGGCCACAGACCACACTGCCCACACGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS CCA 72 bp | TGTGGGCAGTGTGGTCTGTGGCCGCCCACTCTTGTCTaGCCGTGGCTCTATGGCATCTGCATCCTCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: CGQCGLWPPTLV*PWLYGICILHT Trigger: GGTGTGGAGGATGCAGATGCCATAGAGCCACGGCCAGACAAGAGTGGGCGGCCACAGACCACACTGCCCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||
| CDS GCA 72 bp | GGAGCCAAAGGGCCAGTAGGAGACAGCATTCTGCGTTaGCAGGAAAGGAAGCCCCAACATAAACAACACGTC | + |
|
Preference number: 6 (lower is better) Translates to: GAKGPVGDSILR*QERKPQHKQHV Trigger: GACGTGTTGTTTATGTTGGGGCTTCCTTTCCTGGCAACGCAGAATGCTGTCTCCTACTGGCCCTTTGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051864.5 ENSMUST00000165183.10 |
||