Pregenerated sensors for SSTR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044933Ensembl transcript IDs: ENSMUST00000053239.4
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTTCCCTGAGAGCCCTGCCTCTCTGCAGGGTAGGGCGGGGGTTTaGGCAGAAGCTCCAACCTCTCCAGGGCCAGCCTTGCTGGACCCA | + |
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Preference number: 1 (lower is better) Translates to: GFPESPASLQGRAGV*AEAPTSPGPALLDP Trigger: TGGGTCCAGCAAGGCTGGCCCTGGAGAGGTTGGAGCTTCTGCCCAAACCCCCGCCCTACCCTGCAGAGAGGCAGGGCTCTCAGGGAACCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR GCA 90 bp | TGTCTTGAGGAGCCAAGCCCATTCCCAGGACTCTATCATGGCCTGTaGCCCTCTCACCAGCCCCATGCACCCTCCAGGGGATCCTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: CLEEPSPFPGLYHGL*PSHQPHAPSRGSWP Trigger: TGGCCAGGATCCCCTGGAGGGTGCATGGGGCTGGTGAGAGGGGCACAGGCCATGATAGAGTCCTGGGAATGGGCTTGGCTCCTCAAGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR GCA 90 bp | CAGGCCCCACACATGCCTACGTTTGCAAACTTCCTCCTTCTGGGGTaGTTTGCATTCTCCCTGGCCCTTGGCTTCGGACCTCTTGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: QAPHMPTFANFLLLG*FAFSLALGFGPLGP Trigger: GGGGCCAAGAGGTCCGAAGCCAAGGGCCAGGGAGAATGCAAAGCACCCCAGAAGGAGGAAGTTTGCAAACGTAGGCATGTGTGGGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR GCA 90 bp | TTCTCAATGTCTGGATTTGTGGGTTCCCTGAGAGCCCTGCCTCTCTaGAGGGTAGGGCGGGGGTTTGGGCAGAAGCTCCAACCTCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: FSMSGFVGSLRALPL*RVGRGFGQKLQPLQ Trigger: CTGGAGAGGTTGGAGCTTCTGCCCAAACCCCCGCCCTACCCTGCAGAGAGGCAGGGCTCTCAGGGAACCCACAAATCCAGACATTGAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR GCA 90 bp | AGAGGAAGCCCTGGACTGGCCTCAGGCCCCACACATGCCTACGTTTaGAAACTTCCTCCTTCTGGGGTGCTTTGCATTCTCCCTGGCCCT | + |
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Preference number: 1 (lower is better) Translates to: RGSPGLASGPTHAYV*KLPPSGVLCILPGP Trigger: AGGGCCAGGGAGAATGCAAAGCACCCCAGAAGGAGGAAGTTTGCAAACGTAGGCATGTGTGGGGCCTGAGGCCAGTCCAGGGCTTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CCA 90 bp | GGCCTCAGGCCCCACACATGCCTACGTTTGCAAACTTCCTCCTTCTaGGGTGCTTTGCATTCTCCCTGGCCCTTGGCTTCGGACCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: GLRPHTCLRLQTSSF*GALHSPWPLASDLL Trigger: CAAGAGGTCCGAAGCCAAGGGCCAGGGAGAATGCAAAGCACCCCAGAAGGAGGAAGTTTGCAAACGTAGGCATGTGTGGGGCCTGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CCA 90 bp | CTGGCCTGCTCACTTCCTGATCCCATTCCTTCTCAGAGGAAGCCCTaGACTGGCCTCAGGCCCCACACATGCCTACGTTTGCAAACTTCC | + |
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Preference number: 1 (lower is better) Translates to: LACSLPDPIPSQRKP*TGLRPHTCLRLQTS Trigger: GGAAGTTTGCAAACGTAGGCATGTGTGGGGCCTGAGGCCAGTCCAGGGCTTCCTCTGAGAAGGAATGGGATCAGGAAGTGAGCAGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR GCA 90 bp | CCCACACATGCCTACGTTTGCAAACTTCCTCCTTCTGGGGTGCTTTaGATTCTCCCTGGCCCTTGGCTTCGGACCTCTTGGCCCCCATTT | + |
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Preference number: 1 (lower is better) Translates to: PTHAYVCKLPPSGVL*ILPGPWLRTSWPPF Trigger: AAATGGGGGCCAAGAGGTCCGAAGCCAAGGGCCAGGGAGAATGCAAAGCACCCCAGAAGGAGGAAGTTTGCAAACGTAGGCATGTGTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CCA 90 bp | GCCAAGTGGCTTGAGGTGACTAGAAGATCCAGCTTTCTCAATGTCTaGATTTGTGGGTTCCCTGAGAGCCCTGCCTCTCTGCAGGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: AKWLEVTRRSSFLNV*ICGFPESPASLQGR Trigger: CCTACCCTGCAGAGAGGCAGGGCTCTCAGGGAACCCACAAATCCAGACATTGAGAAAGCTGGATCTTCTAGTCACCTCAAGCCACTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR TCA 90 bp | CCATCCCTGAGTCAAAAGAAGAAAACAAGGCCCAGAAAGGGTAAATaGCCGGCCAAAGGACACACAGCAAGTCCTGGCACAGTGGCACAG | + |
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Preference number: 1 (lower is better) Translates to: PSLSQKKKTRPRKGK*PAKGHTASPGTVAQ Trigger: CTGTGCCACTGTGCCAGGACTTGCTGTGTGTCCTTTGGCCGGTCATTTACCCTTTCTGGGCCTTGTTTTCTTCTTTTGACTCAGGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR GCA 90 bp | GAGGTAGGGTCACCTCCTCTTTGTATCCTTGCCACTTTGCATCCTTaGCACCTTGCATCCTTGCTACTTTCTATCCTTGCTACCCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: EVGSPPLCILATLHP*HLASLLLSILATLA Trigger: GGCAAGGGTAGCAAGGATAGAAAGTAGCAAGGATGCAAGGTGGCAAGGATGCAAAGTGGCAAGGATACAAAGAGGAGGTGACCCTACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGCCAAGCCCATTCCCAGGACTCTATCATGGCCTGTGCCCCTCTCACCAGAGATCTCCGGTGGCCTaGGCCTGTGTGGTGTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: EEPSPFPGLYHGLCPSHQRSPVA*ACVVCS Trigger: ACTGCACACCACACAGGCTCAGGCCACCGGAGATCT...CTGGTGAGAGGGGCACAGGCCATGATAGAGTCCTGGGAATGGGCTTGGCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGCCAAGCCCATTCCCAGGACTCTATCATGGCCTGTGCCCCTCTCACCAGCTGCTGCATGGTGTCTaGCCTGGGGACCAGGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: EEPSPFPGLYHGLCPSHQLLHGV*PGDQVA Trigger: AGCTACCTGGTCCCCAGGGCAGACACCATGCAGCAG...CTGGTGAGAGGGGCACAGGCCATGATAGAGTCCTGGGAATGGGCTTGGCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR TCA 90 bp | GCCTCAGGCCCCACACATGCCTACGTTTGCAAACTTCCTCCTTCTGGGGTGCTTTCCAGACCCCTCTTCTaGCAGGGCCCATCCAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: ASGPTHAYVCKLPPSGVLSRPLF*QGPSRL Trigger: GAGCCTGGATGGGCCCTGTCAGAAGAGGGGTCTGGA...AAGCACCCCAGAAGGAGGAAGTTTGCAAACGTAGGCATGTGTGGGGCCTGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTCTGCAGGGTAGGGCGGGGGTTTGGGCAGAAGCTCCAACCTCTCCAGGGACAGTGGCTACTCCCTaGCAACAGCCCTTTAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: ASLQGRAGVWAEAPTSPGTVATP*QQPFSL Trigger: AAGACTAAAGGGCTGTTGTCAGGGAGTAGCCACTGT...CCCTGGAGAGGTTGGAGCTTCTGCCCAAACCCCCGCCCTACCCTGCAGAGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR CCA 90 bp | CACCAGCCCCATGCACCCTCCAGGGGATCCTGGCCACGTGTCTTCTTCAGATTCAGGGGAGCAGGAGGTTaGCTCAGGATCACCACCAAG | + |
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Preference number: 2 (lower is better) Translates to: HQPHAPSRGSWPRVFFRFRGAGG*LRITTK Trigger: CTTGGTGGTGATCCTGAGCCAACCTCCTGCTCCCCT...GAATCTGAAGAAGACACGTGGCCAGGATCCCCTGGAGGGTGCATGGGGCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGGAAGCCCTGGACTGGCCTCAGGCCCCACACATGCCTACGTTTGCAAACGGTAGGGCGGGGGTTTaGGCAGAAGCTCCAACCTCT | + |
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Preference number: 2 (lower is better) Translates to: SEEALDWPQAPHMPTFANGRAGV*AEAPTS Trigger: AGAGGTTGGAGCTTCTGCCCAAACCCCCGCCCTACC...GTTTGCAAACGTAGGCATGTGTGGGGCCTGAGGCCAGTCCAGGGCTTCCTCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGATCTCCGGTGGCCTGAGCCTGTGTGGTGTGCAGTCCCCTCAACCCCATTGCTGCTCAGATCACTaGATGTGGGTGTTCGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SQISGGLSLCGVQSPQPHCCSDH*MWVFEP Trigger: GGGCTCGAACACCCACATGCAGTGATCTGAGCAGCA...ATGGGGTTGAGGGGACTGCACACCACACAGGCTCAGGCCACCGGAGATCTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGCCAAGCCCATTCCCAGGACTCTATCATGGCCTGTGCCCCTCTCACCAGAGCCAAGTAAGCCCCTaGCTCACCCGCATCTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: EEPSPFPGLYHGLCPSHQSQVSP*LTRISD Trigger: ATCAGAGATGCGGGTGAGCCAGGGGCTTACTTGGCT...CTGGTGAGAGGGGCACAGGCCATGATAGAGTCCTGGGAATGGGCTTGGCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 90 bp | GGAGGTCTGACCCACCCAAAGGGCTTATCATCCCTCCCAAGTGTCTaGAGGAGCCAAGCCCATTCCCAGGACTCTATCATGGCCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: GGLTHPKGLSSLPSV*RSQAHSQDSIMACA Trigger: GGCACAGGCCATGATAGAGTCCTGGGAATGGGCTTGGCTCCTCAAGACACTTGGGAGGGATGATAAGCCCTTTGGGTGGGTCAGACCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGGACCATCTCTGGGAAGGGGAGGATGAAGTCCTGAACCAGCTGGAACAGTGGCCTGAGCCTGTGTaGTGTGCAGTCCCCTCAACC | + |
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Preference number: 2 (lower is better) Translates to: QKDHLWEGEDEVLNQLEQWPEPV*CAVPST Trigger: GGTTGAGGGGACTGCACACCACACAGGCTCAGGCCA...CTGTTCCAGCTGGTTCAGGACTTCATCCTCCCCTTCCCAGAGATGGTCCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCAGGGTAGGGCGGGGGTTTGGGCAGAAGCTCCAACCTCTCCAGGGCCAGCAGTTTACCCATCCCTaGGTCAAAAGAAGAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: LCRVGRGFGQKLQPLQGQQFTHP*VKRRKQ Trigger: TTGTTTTCTTCTTTTGACTCAGGGATGGGTAAACTG...CTGGCCCTGGAGAGGTTGGAGCTTCTGCCCAAACCCCCGCCCTACCCTGCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR TCA 90 bp | TCCTGCAGAAGAGGTAGGAGGCCTGGGCATGAACAGATTGGCCGAGACCACACACCTGGTATATCTCCTTaGGGGCCAAGACACAGACTG | + |
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Preference number: 2 (lower is better) Translates to: SCRRGRRPGHEQIGRDHTPGISP*GPRHRL Trigger: CAGTCTGTGTCTTGGCCCTCAAGGAGATATACCAGG...TGTGTGGTCTCGGCCAATCTGTTCATGCCCAGGCCTCCTACCTCTTCTGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR TCA 90 bp | AAGGACCATCTCTGGGAAGGGGAGGATGAAGTCCTGAACCAGCTGGAACAGTGGAGAGGATGGGAGGTCTaGCCCACCCAAAGGGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: KDHLWEGEDEVLNQLEQWRGWEV*PTQRAY Trigger: ATAAGCCCTTTGGGTGGGTCAGACCTCCCATCCTCT...CCACTGTTCCAGCTGGTTCAGGACTTCATCCTCCCCTTCCCAGAGATGGTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR GCA 90 bp | GGGTCACCTCCTCTTTGTATCCTTGCCACTTTGCATCCTTGCCACCTTGCATCCCTCTATCATGGCCTGTaGCCCTCTCACCAGCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: GSPPLCILATLHPCHLASLYHGL*PSHQPH Trigger: ATGGGGCTGGTGAGAGGGGCACAGGCCATGATAGAG...GGATGCAAGGTGGCAAGGATGCAAAGTGGCAAGGATACAAAGAGGAGGTGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGGAAGCCCTGGACTGGCCTCAGGCCCCACACATGCCTACGTTTGCAAACCAAGTCCTGGCACAGTaGCACAGAGTTCAAGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: SEEALDWPQAPHMPTFANQVLAQ*HRVQAY Trigger: ATAGGCTTGAACTCTGTGCCACTGTGCCAGGACTTG...GTTTGCAAACGTAGGCATGTGTGGGGCCTGAGGCCAGTCCAGGGCTTCCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR CCA 90 bp | GGGTCACCTCCTCTTTGTATCCTTGCCACTTTGCATCCTTGCCACCTTGCATCCCCCTCCAGGGGATCCTaGCCACGTGTCTTCTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: GSPPLCILATLHPCHLASPSRGS*PRVFFR Trigger: TCTGAAGAAGACACGTGGCCAGGATCCCCTGGAGGG...GGATGCAAGGTGGCAAGGATGCAAAGTGGCAAGGATACAAAGAGGAGGTGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR CCA 90 bp | GCCTCAGGCCCCACACATGCCTACGTTTGCAAACTTCCTCCTTCTGGGGTGCTTCAGAAGGACCATCTCTaGGAAGGGGAGGATGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: ASGPTHAYVCKLPPSGVLQKDHL*EGEDEV Trigger: GACTTCATCCTCCCCTTCCCAGAGATGGTCCTTCTG...AAGCACCCCAGAAGGAGGAAGTTTGCAAACGTAGGCATGTGTGGGGCCTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 90 bp | TTGCCACTATGTATCCTTGCCACTTTGTATCCCGAGGCAGCCCTGTaGTGGCCAGCAGTAGCTTCCCCAGCAAGACTCAATTCCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LPLCILATLYPEAAL*WPAVASPARLNSLP Trigger: TGGGAGGGAATTGAGTCTTGCTGGGGAAGCTACTGCTGGCCACAACAGGGCTGCCTCGGGATACAAAGTGGCAAGGATACATAGTGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR TCA 90 bp | AAGGACCATCTCTGGGAAGGGGAGGATGAAGTCCTGAACCAGCTGGAACAGTGGACTTGGGCCCTGATCTaGAAGGAGAGTGATCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: KDHLWEGEDEVLNQLEQWTWALI*KESDPG Trigger: ACCAGGATCACTCTCCTTTCAGATCAGGGCCCAAGT...CCACTGTTCCAGCTGGTTCAGGACTTCATCCTCCCCTTCCCAGAGATGGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGATCTCCGGTGGCCTGAGCCTGTGTGGTGTGCAGTCCCCTCAACCCCATAGAACCCCTGAAACTTaGTTTCATTTGCCTTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SQISGGLSLCGVQSPQPHRTPET*FHLPSG Trigger: TCCAGAAGGCAAATGAAACCAAGTTTCAGGGGTTCT...ATGGGGTTGAGGGGACTGCACACCACACAGGCTCAGGCCACCGGAGATCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR TCA 90 bp | AAGGACCATCTCTGGGAAGGGGAGGATGAAGTCCTGAACCAGCTGGAACAGTGGTCTTCAGATTCTGCCTaGAGCCATCAACACTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: KDHLWEGEDEVLNQLEQWSSDSA*SHQHCN Trigger: GTTGCAGTGTTGATGGCTTCAGGCAGAATCTGAAGA...CCACTGTTCCAGCTGGTTCAGGACTTCATCCTCCCCTTCCCAGAGATGGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR TCA 90 bp | AAGGACCATCTCTGGGAAGGGGAGGATGAAGTCCTGAACCAGCTGGAACAGTGGAGCAGTAAGAACCCCTaGAACTTGGTTTCATTTGCC | + |
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Preference number: 2 (lower is better) Translates to: KDHLWEGEDEVLNQLEQWSSKNP*NLVSFA Trigger: GGCAAATGAAACCAAGTTTCAGGGGTTCTTACTGCT...CCACTGTTCCAGCTGGTTCAGGACTTCATCCTCCCCTTCCCAGAGATGGTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR CCA 90 bp | GGACTGGCCTCAGGCCCCACACATGCCTACGTTTGCAAACTTCCTCCTTCTGGGAGATATCTTGTTTCTTaGCCAGATGGCCCAAATTCT | + |
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Preference number: 2 (lower is better) Translates to: GLASGPTHAYVCKLPPSGRYLVS*PDGPNS Trigger: AGAATTTGGGCCATCTGGCCAAGAAACAAGATATCT...CCCAGAAGGAGGAAGTTTGCAAACGTAGGCATGTGTGGGGCCTGAGGCCAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGCTACCCTTGCCACTTTGTATCCTTGACATGATGCATCCTTGCCACTTTGGGTCTGTAGGACACTaGACTGTCCTGCAGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SLLPLPLCILDMMHPCHFGSVGH*TVLQKR Trigger: CCTCTTCTGCAGGACAGTCCAGTGTCCTACAGACCC...AAAGTGGCAAGGATGCATCATGTCAAGGATACAAAGTGGCAAGGGTAGCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 90 bp | GGTCACCTCCTCTTTGTATCCTTGCCACTTTGCATCCTTGCCACCTaGCATCCTTGCTACTTTCTATCCTTGCTACCCTTGCCACTTTGT | + |
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Preference number: 2 (lower is better) Translates to: GHLLFVSLPLCILAT*HPCYFLSLLPLPLC Trigger: ACAAAGTGGCAAGGGTAGCAAGGATAGAAAGTAGCAAGGATGCAAGGTGGCAAGGATGCAAAGTGGCAAGGATACAAAGAGGAGGTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGCTACCCTTGCCACTTTGTATCCTTGACATGATGCATCCTTGCCACTTTCATCAGCTGGAGCCTTaGGAATACAGAGGATGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SLLPLPLCILDMMHPCHFHQLEP*EYRGWE Trigger: CTCCCATCCTCTGTATTCCCAAGGCTCCAGCTGATG...AAAGTGGCAAGGATGCATCATGTCAAGGATACAAAGTGGCAAGGGTAGCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 90 bp | CCACTTTGCATCCTTGCCACCTTGCATCCTTGCTACTTTCTATCCTaGCTACCCTTGCCACTTTGTATCCTTGACATGATGCATCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: PLCILATLHPCYFLS*LPLPLCILDMMHPC Trigger: GCAAGGATGCATCATGTCAAGGATACAAAGTGGCAAGGGTAGCAAGGATAGAAAGTAGCAAGGATGCAAGGTGGCAAGGATGCAAAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR GCA 90 bp | TCCTTGCTACCCTTGCCACTTTGTATCCTTGACATGATGCATCCTTGCCACTTTGTCTTCTTCAGATTCTaGCTGAAGCCATCAACACTG | + |
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Preference number: 2 (lower is better) Translates to: SLLPLPLCILDMMHPCHFVFFRF*LKPSTL Trigger: CAGTGTTGATGGCTTCAGGCAGAATCTGAAGAAGAC...AAAGTGGCAAGGATGCATCATGTCAAGGATACAAAGTGGCAAGGGTAGCAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGCTACCCTTGCCACTTTGTATCCTTGACATGATGCATCCTTGCCACTTTGTTTCATTTGCCTTCTaGAAAATTCTTCCCCTCATG | + |
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Preference number: 2 (lower is better) Translates to: SLLPLPLCILDMMHPCHFVSFAF*KILPLM Trigger: CATGAGGGGAAGAATTTTCCAGAAGGCAAATGAAAC...AAAGTGGCAAGGATGCATCATGTCAAGGATACAAAGTGGCAAGGGTAGCAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR GCA 72 bp | GAGCCAAGCCCATTCCCAGGACTCTATCATGGCCTGTaGCCCTCTCACCAGCCCCATGCACCCTCCAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: EPSPFPGLYHGL*PSHQPHAPSRG Trigger: TCCCCTGGAGGGTGCATGGGGCTGGTGAGAGGGGCACAGGCCATGATAGAGTCCTGGGAATGGGCTTGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR-3UTR CAA 90 bp | GCCTCTCTGCAGGGTAGGGCGGGGGTTTGGGCAGAAGCTCCAACCTCTCCAGGGTCTTTCTCCCTCTTCTaGCCTCAGGCTGCTGCATGG | + |
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Preference number: 3 (lower is better) Translates to: ASLQGRAGVWAEAPTSPGSFSLF*PQAAAW Trigger: CCATGCAGCAGCCTGAGGCAAGAAGAGGGAGAAAGA...CCCTGGAGAGGTTGGAGCTTCTGCCCAAACCCCCGCCCTACCCTGCAGAGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR GCA 72 bp | TCTGGATTTGTGGGTTCCCTGAGAGCCCTGCCTCTCTaGAGGGTAGGGCGGGGGTTTGGGCAGAAGCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: SGFVGSLRALPL*RVGRGFGQKLQ Trigger: TTGGAGCTTCTGCCCAAACCCCCGCCCTACCCTGCAGAGAGGCAGGGCTCTCAGGGAACCCACAAATCCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CCA 72 bp | CCCTCTCACCAGCCCCATGCACCCTCCAGGGGATCCTaGCCACGTGTCTTCTTCAGATTCTGCCTGAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: PSHQPHAPSRGS*PRVFFRFCLKP Trigger: TGGCTTCAGGCAGAATCTGAAGAAGACACGTGGCCAGGATCCCCTGGAGGGTGCATGGGGCTGGTGAGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR GCA 72 bp | CAGAGGAAGCCCTGGACTGGCCTCAGGCCCCACACATaGCTACGTTTGCAAACTTCCTCCTTCTGGGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: QRKPWTGLRPHT*LRLQTSSFWGA Trigger: AGCACCCCAGAAGGAGGAAGTTTGCAAACGTAGGCATGTGTGGGGCCTGAGGCCAGTCCAGGGCTTCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CCA 72 bp | CAGGGCCAGCCTTGCTGGACCCAGAAGGACCATCTCTaGGAAGGGGAGGATGAAGTCCTGAACCAGCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: QGQPCWTQKDHL*EGEDEVLNQLE Trigger: TTCCAGCTGGTTCAGGACTTCATCCTCCCCTTCCCAGAGATGGTCCTTCTGGGTCCAGCAAGGCTGGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR TCA 72 bp | CCTTCACCTCCAGTAGCTGACACAGAAACCACCCACTaGAGGGGCAGGGTATGGGCTGAACCTGAGGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PSPPVADTETTH*RGRVWAEPEVG Trigger: CCCTACCTCAGGTTCAGCCCATACCCTGCCCCTTCAGTGGGTGGTTTCTGTGTCAGCTACTGGAGGTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR GCA 72 bp | GCCTACGTTTGCAAACTTCCTCCTTCTGGGGTGCTTTaGATTCTCCCTGGCCCTTGGCTTCGGACCTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: AYVCKLPPSGVL*ILPGPWLRTSW Trigger: CCAAGAGGTCCGAAGCCAAGGGCCAGGGAGAATGCAAAGCACCCCAGAAGGAGGAAGTTTGCAAACGTAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR GCA 72 bp | CCTGGACTGGCCTCAGGCCCCACACATGCCTACGTTTaGAAACTTCCTCCTTCTGGGGTGCTTTGCATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PGLASGPTHAYV*KLPPSGVLCIL Trigger: GAGAATGCAAAGCACCCCAGAAGGAGGAAGTTTGCAAACGTAGGCATGTGTGGGGCCTGAGGCCAGTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR CCA 72 bp | TCACTTCCTGATCCCATTCCTTCTCAGAGGAAGCCCTaGACTGGCCTCAGGCCCCACACATGCCTACGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SLPDPIPSQRKP*TGLRPHTCLRL Trigger: CAAACGTAGGCATGTGTGGGGCCTGAGGCCAGTCCAGGGCTTCCTCTGAGAAGGAATGGGATCAGGAAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR TCA 72 bp | CCCACCCAAAGGGCTTATCATCCCTCCCAAGTGTCTTaGGGAGCCAAGCCCATTCCCAGGACTCTATCATGG | + |
|
Preference number: 3 (lower is better) Translates to: PTQRAYHPSQVS*GAKPIPRTLSW Trigger: CCATGATAGAGTCCTGGGAATGGGCTTGGCTCCTCAAGACACTTGGGAGGGATGATAAGCCCTTTGGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR GCA 72 bp | TGTGGGTGTTCGAGCCCCGAGGTCAAGCCCAGCTTCTaGTCTTTTCTGAACCACGCTGGTTCTTTGAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: CGCSSPEVKPSF*SFLNHAGSLKV Trigger: GACCTTCAAAGAACCAGCGTGGTTCAGAAAAGAGCAGAAGCTGGGCTTGACCTCGGGGCTCGAACACCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR GCA 72 bp | CACATGCCTACGTTTGCAAACTTCCTCCTTCTGGGGTaGTTTGCATTCTCCCTGGCCCTTGGCTTCGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: HMPTFANFLLLG*FAFSLALGFGP Trigger: AGGTCCGAAGCCAAGGGCCAGGGAGAATGCAAAGCACCCCAGAAGGAGGAAGTTTGCAAACGTAGGCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR CCA 72 bp | ATCCTTGCCACTTTGTATCCCGAGGCAGCCCTGTTGTaGCCAGCAGTAGCTTCCCCAGCAAGACTCAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: ILATLYPEAALL*PAVASPARLNS Trigger: GGAATTGAGTCTTGCTGGGGAAGCTACTGCTGGCCACAACAGGGCTGCCTCGGGATACAAAGTGGCAAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR TCA 72 bp | AGAAGGACCATCTCTGGGAAGGGGAGGATGAAGTCCTaGACCAGCTGGAACAGTGGCTACTCCCTGACAACA | + |
|
Preference number: 3 (lower is better) Translates to: RRTISGKGRMKS*TSWNSGYSLTT Trigger: TGTTGTCAGGGAGTAGCCACTGTTCCAGCTGGTTCAGGACTTCATCCTCCCCTTCCCAGAGATGGTCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR GCA 72 bp | TCCAGGGGATCCTGGCCACGTGTCTTCTTCAGATTCTaGCTGAAGCCATCAACACTGCAACTGAGCTTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SRGSWPRVFFRF*LKPSTLQLSLA Trigger: GGCTAAGCTCAGTTGCAGTGTTGATGGCTTCAGGCAGAATCTGAAGAAGACACGTGGCCAGGATCCCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR CCA 72 bp | ACTGCAACTGAGCTTAGCCTAAGGGGAGCAGGAGGTTaGCTCAGGATCACCACCAAGTTCTGTTCTCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TATELSLRGAGG*LRITTKFCSLL Trigger: GAGGAGAGAACAGAACTTGGTGGTGATCCTGAGCCAACCTCCTGCTCCCCTTAGGCTAAGCTCAGTTGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR TCA 72 bp | GCCCTTGGCTTCGGACCTCTTGGCCCCCATTTTTCATaGATACCTTCACCTCCAGTAGCTGACACAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: ALGFGPLGPHFS*IPSPPVADTET Trigger: GGTTTCTGTGTCAGCTACTGGAGGTGAAGGTATTCATGAAAAATGGGGGCCAAGAGGTCCGAAGCCAAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR CCA 72 bp | GAAGGGGAGGATGAAGTCCTGAACCAGCTGGAACAGTaGCTACTCCCTGACAACAGCCCTTTAGTCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: EGEDEVLNQLEQ*LLPDNSPLVFT Trigger: TGTGAAGACTAAAGGGCTGTTGTCAGGGAGTAGCCACTGTTCCAGCTGGTTCAGGACTTCATCCTCCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR CCA 72 bp | CTTTGCATTCTCCCTGGCCCTTGGCTTCGGACCTCTTaGCCCCCATTTTTCATGAATACCTTCACCTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LCILPGPWLRTS*PPFFMNTFTSS Trigger: ACTGGAGGTGAAGGTATTCATGAAAAATGGGGGCCAAGAGGTCCGAAGCCAAGGGCCAGGGAGAATGCAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTGGCCCTTGGCTTCGGACCTCTTGGCCCCCATTTTTCATGAATACCTTCGATCACCAAGATATCTaGTTTCTTGGCCAGATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LPGPWLRTSWPPFFMNTFDHQDI*FLGQMA Trigger: GGCCATCTGGCCAAGAAACAAGATATCTTGGTGATC...GAAGGTATTCATGAAAAATGGGGGCCAAGAGGTCCGAAGCCAAGGGCCAGGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTGGCCCTTGGCTTCGGACCTCTTGGCCCCCATTTTTCATGAATACCTTCTGCATCCTTGCCACTTaGCATCCTTGCTACTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LPGPWLRTSWPPFFMNTFCILAT*HPCYFA Trigger: TGCAAAGTAGCAAGGATGCAAAGTGGCAAGGATGCA...GAAGGTATTCATGAAAAATGGGGGCCAAGAGGTCCGAAGCCAAGGGCCAGGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR CCA 72 bp | CTTGAGGTGACTAGAAGATCCAGCTTTCTCAATGTCTaGATTTGTGGGTTCCCTGAGAGCCCTGCCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LEVTRRSSFLNV*ICGFPESPASL Trigger: CAGAGAGGCAGGGCTCTCAGGGAACCCACAAATCCAGACATTGAGAAAGCTGGATCTTCTAGTCACCTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR TCA 72 bp | GTGCAGAGACAGAGGGTGTGGCCAAGTGGCTTGAGGTaGCTAGAAGATCCAGCTTTCTCAATGTCTGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: VQRQRVWPSGLR*LEDPAFSMSGF Trigger: AAATCCAGACATTGAGAAAGCTGGATCTTCTAGTCACCTCAAGCCACTTGGCCACACCCTCTGTCTCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR CCA 72 bp | CAGCAAGACTCAATTCCCTCCCAAATTCCAGCAGACTaGCGAACTGAGGAACCCCATTCTCGTTATGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: QQDSIPSQIPAD*RTEEPHSRYDE Trigger: CTCATCATAACGAGAATGGGGTTCCTCAGTTCGCCAGTCTGCTGGAATTTGGGAGGGAATTGAGTCTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR TCA 72 bp | AGTCAAAAGAAGAAAACAAGGCCCAGAAAGGGTAAATaGCCGGCCAAAGGACACACAGCAAGTCCTGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SQKKKTRPRKGK*PAKGHTASPGT Trigger: TGTGCCAGGACTTGCTGTGTGTCCTTTGGCCGGTCATTTACCCTTTCTGGGCCTTGTTTTCTTCTTTTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR TCA 72 bp | GTCCTGGTATATCTCCTTGAGGGCCAAGACACAGACTaGTCACCAAGATATCTTGTTTCTTGGCCAGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: VLVYLLEGQDTD*SPRYLVSWPDG Trigger: GCCATCTGGCCAAGAAACAAGATATCTTGGTGATCAGTCTGTGTCTTGGCCCTCAAGGAGATATACCAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR GCA 72 bp | TCCTTGCCACTTTGCATCCTTGCCACCTTGCATCCTTaGTACTTTCTATCCTTGCTACCCTTGCCACTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLPLCILATLHP*YFLSLLPLPLC Trigger: ACAAAGTGGCAAGGGTAGCAAGGATAGAAAGTAGCAAGGATGCAAGGTGGCAAGGATGCAAAGTGGCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGGGCTTATCATCCCTCCCAAGTGTCTTGAGGAGCCAAGCCCATTCCCAGGAAACTTGGTTTCATTaGCCTTCTGGAAAATTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PKGLSSLPSVLRSQAHSQETWFH*PSGKFF Trigger: GAAGAATTTTCCAGAAGGCAAATGAAACCAAGTTTC...CTGGGAATGGGCTTGGCTCCTCAAGACACTTGGGAGGGATGATAAGCCCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR GCA 72 bp | CCCTTGCCACTTTGTATCCTTGACATGATGCATCCTTaGCACTTTGCATCCTTGCTACTTTGCATCCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PLPLCILDMMHP*HFASLLLCILA Trigger: AGCAAGGATGCAAAGTAGCAAGGATGCAAAGTGGCAAGGATGCATCATGTCAAGGATACAAAGTGGCAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR GCA 72 bp | TCACCTCCTCTTTGTATCCTTGCCACTTTGCATCCTTaGCACCTTGCATCCTTGCTACTTTCTATCCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SPPLCILATLHP*HLASLLLSILA Trigger: AGCAAGGATAGAAAGTAGCAAGGATGCAAGGTGGCAAGGATGCAAAGTGGCAAGGATACAAAGAGGAGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR TCA 72 bp | CTTTCTATCCTTGCTACCCTTGCCACTTTGTATCCTTaGCATGATGCATCCTTGCCACTTTGCATCCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSILATLATLYP*HDASLPLCILA Trigger: AGCAAGGATGCAAAGTGGCAAGGATGCATCATGTCAAGGATACAAAGTGGCAAGGGTAGCAAGGATAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR TCA 72 bp | TATCCTTGCTACCCTTGCCACTTTGTATCCTTGACATaGTGCATCCTTGCCACTTTGCATCCTTGCTACTTT | + |
|
Preference number: 3 (lower is better) Translates to: YPCYPCHFVSLT*CILATLHPCYF Trigger: AAAGTAGCAAGGATGCAAAGTGGCAAGGATGCATCATGTCAAGGATACAAAGTGGCAAGGGTAGCAAGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR GCA 72 bp | CCTTGCTACTTTGTATCCTTGCCACATTTGCAACCTTaGTACTTTGTACTCTTGCTATGTTGTGTCCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PCYFVSLPHLQP*YFVLLLCCVLA Trigger: GGCTAGGACACAACATAGCAAGAGTACAAAGTAGCAAGGTTGCAAATGTGGCAAGGATACAAAGTAGCAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR GCA 72 bp | TCCTTGCCACTTTGCATCCTTGCTACTTTGCATCCTTaGTACTTTGTAACCTTGCTACTTTGTATCCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLPLCILATLHP*YFVTLLLCILA Trigger: GGCAAGGATACAAAGTAGCAAGGTTACAAAGTAGCAAGGATGCAAAGTAGCAAGGATGCAAAGTGGCAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR GCA 72 bp | TCCTTGCTACTTTGTAACCTTGCTACTTTGTATCCTTaGCACATTTGCAACCTTGCTACTTTGTACTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SLLLCNLATLYP*HICNLATLYSC Trigger: GCAAGAGTACAAAGTAGCAAGGTTGCAAATGTGGCAAGGATACAAAGTAGCAAGGTTACAAAGTAGCAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR GCA 72 bp | CTTTGTAACCTTGCTACTTTGTATCCTTGCCACATTTaGAACCTTGCTACTTTGTACTCTTGCTATGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LCNLATLYPCHI*NLATLYSCYVV Trigger: CACAACATAGCAAGAGTACAAAGTAGCAAGGTTGCAAATGTGGCAAGGATACAAAGTAGCAAGGTTACAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR TCA 90 bp | GCTCAGATCACTGCATGTGGGTGTTCGAGCCCCGAGGTCAAGCCCAGCTTCTGCCCACCACCATGCGTGTaGCCCTGCGCTCAGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AQITACGCSSPEVKPSFCPPPCV*PCAQSG Trigger: GCCGCTCTGAGCGCAGGGTCACACGCATGGTGGTGG...GCAGAAGCTGGGCTTGACCTCGGGGCTCGAACACCCACATGCAGTGATCTGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCTGCAGGGTAGGGCGGGGGTTTGGGCAGAAGCTCCAACCTCTCCAGGGTGCGAAAGCCCTGCTTaGAGCGGTAGGAGAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLQGRAGVWAEAPTSPGCESPA*SGRRGS Trigger: GCTTCCTCTCCTACCGCTTCAAGCAGGGCTTTCGCA...CCCTGGAGAGGTTGGAGCTTCTGCCCAAACCCCCGCCCTACCCTGCAGAGAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAGGGTAGGGCGGGGGTTTGGGCAGAAGCTCCAACCTCTCCAGGGCCAGAGATCACCAGCGAGTTaGCCAGCAAACCCACCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LCRVGRGFGQKLQPLQGQRSPAS*PANPPR Trigger: GCGTGGTGGGTTTGCTGGGCAACTCGCTGGTGATCT...CTGGCCCTGGAGAGGTTGGAGCTTCTGCCCAAACCCCCGCCCTACCCTGCAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR GCA 90 bp | GCTCAGATCACTGCATGTGGGTGTTCGAGCCCCGAGGTCAAGCCCAGCTTCTGCGGCCACCCAGACAGCTaGACTGACCGTGCGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AQITACGCSSPEVKPSFCGHPDS*TDRASH Trigger: GTGGCTCGCACGGTCAGTGCAGCTGTCTGGGTGGCC...GCAGAAGCTGGGCTTGACCTCGGGGCTCGAACACCCACATGCAGTGATCTGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR CCA 90 bp | CCAAAGGGCTTATCATCCCTCCCAAGTGTCTTGAGGAGCCAAGCCCATTCCCAGGACCGTGCGAGCCACTaGTGCCGTGCGCCAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKGLSSLPSVLRSQAHSQDRASH*CRAPAG Trigger: GCCCGCTGGCGCACGGCACCAGTGGCTCGCACGGTC...CTGGGAATGGGCTTGGCTCCTCAAGACACTTGGGAGGGATGATAAGCCCTTTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR CCA 90 bp | AGGAGCCAAGCCCATTCCCAGGACTCTATCATGGCCTGTGCCCCTCTCACCAGCCCCTGTGCAGGGCCGTaGCTGTTGTCCACTAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSQAHSQDSIMACAPLTSPCAGP*LLSTSA Trigger: GGCACTAGTGGACAACAGCCACGGCCCTGCACAGGG...GCTGGTGAGAGGGGCACAGGCCATGATAGAGTCCTGGGAATGGGCTTGGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR GCA 90 bp | GCTCAGATCACTGCATGTGGGTGTTCGAGCCCCGAGGTCAAGCCCAGCTTCTGCGCAGAGGACGAAGAGTaGCACCACGGCCACCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQITACGCSSPEVKPSFCAEDEE*HHGHHH Trigger: ATGGTGGTGGCCGTGGTGGCACTCTTCGTCCTCTGC...GCAGAAGCTGGGCTTGACCTCGGGGCTCGAACACCCACATGCAGTGATCTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGAAGCCCTGGACTGGCCTCAGGCCCCACACATGCCTACGTTTGCAAACTCTGGCCACTGCATGTaGCACGTGCTCATGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SEEALDWPQAPHMPTFANSGHCM*HVLMPR Trigger: CCGGGGCATGAGCACGTGCCACATGCAGTGGCCAGA...GTTTGCAAACGTAGGCATGTGTGGGGCCTGAGGCCAGTCCAGGGCTTCCTCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| 3UTR CAA 72 bp | CCTGCAGAAGAGGTAGGAGGCCTGGGCATGAACAGATaGGCCGAGACCACACAGCAGCATGGGGAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PAEEVGGLGMNR*AETTQQHGEGS Trigger: TGAGCCCTCCCCATGCTGCTGTGTGGTCTCGGCCAATCTGTTCATGCCCAGGCCTCCTACCTCTTCTGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR GCA 90 bp | CACCAGCCCCATGCACCCTCCAGGGGATCCTGGCCACGTGTCTTCTTCAGATTCACAGATGGCTCAGTGTaGTGGCCTTGTCCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HQPHAPSRGSWPRVFFRFTDGSV*WPCPQL Trigger: CAGCTGGGGACAAGGCCAGCACACTGAGCCATCTGT...GAATCTGAAGAAGACACGTGGCCAGGATCCCCTGGAGGGTGCATGGGGCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR CCA 90 bp | CCAAAGGGCTTATCATCCCTCCCAAGTGTCTTGAGGAGCCAAGCCCATTCCCAGGGCAGCCGCTGGCTCTaGCCACTGCATGTGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: PKGLSSLPSVLRSQAHSQGSRWL*PLHVAR Trigger: ACGTGCCACATGCAGTGGCCAGAGCCAGCGGCTGCC...CTGGGAATGGGCTTGGCTCCTCAAGACACTTGGGAGGGATGATAAGCCCTTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR TCA 90 bp | ACACACAGCAAGTCCTGGCACAGTGGCACAGAGTTCAAGCCTATAAACATTCCACGTGCGCCAGCGGGCTaGGCGTGTGGGGTGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: THSKSWHSGTEFKPINIPRAPAG*ACGVHH Trigger: GTGGTGCACCCCACACGCTCAGCCCGCTGGCGCACG...TGGAATGTTTATAGGCTTGAACTCTGTGCCACTGTGCCAGGACTTGCTGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR TCA 90 bp | ATTCTCGTTATGATGAGGATACTGAGGTGCAGAGACAGAGGGTGTGGCCAAGTGGGTGCCTGTACCCACTaGCACGAGGGCGCCCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ILVMMRILRCRDRGCGQVGACTH*HEGART Trigger: GGTGCGGGCGCCCTCGTGTCAGTGGGTACAGGCACC...CACTTGGCCACACCCTCTGTCTCTGCACCTCAGTATCCTCATCATAACGAGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR GCA 90 bp | AAGGACCATCTCTGGGAAGGGGAGGATGAAGTCCTGAACCAGCTGGAACAGTGGTGTGGCACGTGCTCATaGCCCGGGGCACTCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KDHLWEGEDEVLNQLEQWCGTCS*PGALLR Trigger: TCTCAGGAGTGCCCCGGGGCATGAGCACGTGCCACA...CCACTGTTCCAGCTGGTTCAGGACTTCATCCTCCCCTTCCCAGAGATGGTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR GCA 90 bp | AAGGACCATCTCTGGGAAGGGGAGGATGAAGTCCTGAACCAGCTGGAACAGTGGACTGCATGTGGCACGTaGTCATGCCCCGGGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KDHLWEGEDEVLNQLEQWTACGT*SCPGAL Trigger: GAGTGCCCCGGGGCATGAGCACGTGCCACATGCAGT...CCACTGTTCCAGCTGGTTCAGGACTTCATCCTCCCCTTCCCAGAGATGGTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR CCA 90 bp | AAGGACCATCTCTGGGAAGGGGAGGATGAAGTCCTGAACCAGCTGGAACAGTGGGGTTTGCGCAGCTGTTaGCGTAGGGCAGCGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KDHLWEGEDEVLNQLEQWGLRSC*RRAAPP Trigger: TGGTGGCGCTGCCCTACGCCAACAGCTGCGCAAACC...CCACTGTTCCAGCTGGTTCAGGACTTCATCCTCCCCTTCCCAGAGATGGTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGGCCCCACACATGCCTACGTTTGCAAACTTCCTCCTTCTGGGGTGCTTTGGGGCAGAAGCTGCTaGTCCTTAGCAGTCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASGPTHAYVCKLPPSGVLWGRSC*SLAVPV Trigger: CACAGGGACTGCTAAGGAGCAGCAGCTTCTGCCCCA...AAGCACCCCAGAAGGAGGAAGTTTGCAAACGTAGGCATGTGTGGGGCCTGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR CCA 90 bp | AAGGACCATCTCTGGGAAGGGGAGGATGAAGTCCTGAACCAGCTGGAACAGTGGTGGTCACTGATGGGCTaGACGTGTGCCGCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: KDHLWEGEDEVLNQLEQWWSLMG*TCAAGP Trigger: TGGTCCTGCGGCACACGTCCAGCCCATCAGTGACCA...CCACTGTTCCAGCTGGTTCAGGACTTCATCCTCCCCTTCCCAGAGATGGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
||
| CDS-3UTR GCA 90 bp | AAGGACCATCTCTGGGAAGGGGAGGATGAAGTCCTGAACCAGCTGGAACAGTGGACTAGTGCCAGCCTGTaGGATCTGACTGAGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KDHLWEGEDEVLNQLEQWTSASL*DLTEPP Trigger: GGGAGGCTCAGTCAGATCGCACAGGCTGGCACTAGT...CCACTGTTCCAGCTGGTTCAGGACTTCATCCTCCCCTTCCCAGAGATGGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS-3UTR TCA 90 bp | CTCGTTATGATGAGGATACTGAGGTGCAGAGACAGAGGGTGTGGCCAAGTGGCTAGATCAAGATGCCACTaGCAGCCAGGCCTGTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LVMMRILRCRDRGCGQVARSRCH*QPGLSG Trigger: GCCTGACAGGCCTGGCTGTCAGTGGCATCTTGATCT...AGCCACTTGGCCACACCCTCTGTCTCTGCACCTCAGTATCCTCATCATAACGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS-3UTR CCA 90 bp | CACCACCAGAGAAGGAATACAAAATTAGAAGACGAGTCAGCTGTAGGCCCCAGATCGCCAGGCAGCCGCTaGCTCTGGCCACTGCATGTG | + |
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Preference number: 4 (lower is better) Translates to: HHQRRNTKLEDESAVGPRSPGSR*LWPLHV Trigger: CACATGCAGTGGCCAGAGCCAGCGGCTGCCTGGCGA...TCTGGGGCCTACAGCTGACTCGTCTTCTAATTTTGTATTCCTTCTCTGGTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS-3UTR CCA 90 bp | ATTCTCGTTATGATGAGGATACTGAGGTGCAGAGACAGAGGGTGTGGCCAAGTGCCTTGTCCCCAGCTGTaGCCTCCTGGGGCAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: ILVMMRILRCRDRGCGQVPCPQL*PPGAEA Trigger: AGCTTCTGCCCCAGGAGGCCACAGCTGGGGACAAGG...CACTTGGCCACACCCTCTGTCTCTGCACCTCAGTATCCTCATCATAACGAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 72 bp | TGCCTACGTTTGCAAACTTCCTCCTTCTGGGGTGCTTaGCATTCTCCCTGGCCCTTGGCTTCGGACCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: CLRLQTSSFWGA*HSPWPLASDLL Trigger: CAAGAGGTCCGAAGCCAAGGGCCAGGGAGAATGCAAAGCACCCCAGAAGGAGGAAGTTTGCAAACGTAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS-3UTR GCA 90 bp | AGCCATGTACATAAGGTCATTCTCGCTGCTGCTCAGATCACTGCATGTGGGTGTGCTGGCTCTGGCCACTaGATGTGGCACGTGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: SHVHKVILAAAQITACGCAGSGH*MWHVLM Trigger: CATGAGCACGTGCCACATGCAGTGGCCAGAGCCAGC...ACACCCACATGCAGTGATCTGAGCAGCAGCGAGAATGACCTTATGTACATGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 72 bp | GACAACAGCCCTTTAGTCTTCACATCAGCTGGAGCCTaGGGAATACAGAGGATGGGAGGTCTGACCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: DNSPLVFTSAGA*GIQRMGGLTHP Trigger: TGGGTGGGTCAGACCTCCCATCCTCTGTATTCCCAAGGCTCCAGCTGATGTGAAGACTAAAGGGCTGTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 72 bp | TGTATCCTTGCCACTTTGTATCCCGAGGCAGCCCTGTaGTGGCCAGCAGTAGCTTCCCCAGCAAGACTCAAT | + |
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Preference number: 4 (lower is better) Translates to: CILATLYPEAAL*WPAVASPARLN Trigger: ATTGAGTCTTGCTGGGGAAGCTACTGCTGGCCACAACAGGGCTGCCTCGGGATACAAAGTGGCAAGGATACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 72 bp | GCTTTGCATTCTCCCTGGCCCTTGGCTTCGGACCTCTaGGCCCCCATTTTTCATGAATACCTTCACCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ALHSPWPLASDL*APIFHEYLHLQ Trigger: CTGGAGGTGAAGGTATTCATGAAAAATGGGGGCCAAGAGGTCCGAAGCCAAGGGCCAGGGAGAATGCAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS-3UTR TCA 90 bp | ACACACAGCAAGTCCTGGCACAGTGGCACAGAGTTCAAGCCTATAAACATTCCACCAGCCTGTGCGATCTaGCTGAGCCTCCCGTTCATC | + |
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Preference number: 4 (lower is better) Translates to: THSKSWHSGTEFKPINIPPACAI*LSLPFI Trigger: GATGAACGGGAGGCTCAGTCAGATCGCACAGGCTGG...TGGAATGTTTATAGGCTTGAACTCTGTGCCACTGTGCCAGGACTTGCTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS-3UTR GCA 90 bp | CACCACCAGAGAAGGAATACAAAATTAGAAGACGAGTCAGCTGTAGGCCCCAGACTCCCGTTCATCTCCTaGCCTCTCTGCATCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: HHQRRNTKLEDESAVGPRLPFIS*PLCILR Trigger: GCGGAGGATGCAGAGAGGGCAGGAGATGAACGGGAG...TCTGGGGCCTACAGCTGACTCGTCTTCTAATTTTGTATTCCTTCTCTGGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS-3UTR TCA 90 bp | AGCCATGTACATAAGGTCATTCTCGCTGCTGCTCAGATCACTGCATGTGGGTGTAGGGTAGCCCTAGCATaGAGAGCTCATCAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SHVHKVILAAAQITACGCRVALA*RAHQPE Trigger: CTCTGGCTGATGAGCTCTTCATGCTAGGGCTACCCT...ACACCCACATGCAGTGATCTGAGCAGCAGCGAGAATGACCTTATGTACATGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 72 bp | GAGGTAGGGTCACCTCCTCTTTGTATCCTTGCCACTTaGCATCCTTGCCACCTTGCATCCTTGCTACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: EVGSPPLCILAT*HPCHLASLLLS Trigger: AGAAAGTAGCAAGGATGCAAGGTGGCAAGGATGCAAAGTGGCAAGGATACAAAGAGGAGGTGACCCTACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS-3UTR TCA 90 bp | TCCTTGCTACCCTTGCCACTTTGTATCCTTGACATGATGCATCCTTGCCACTTTGGTCGTAGGCTCAGATaGAGGATAGGTAACAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SLLPLPLCILDMMHPCHFGRRLR*RIGNSG Trigger: GCCACTGTTACCTATCCTTCATCTGAGCCTACGACC...AAAGTGGCAAGGATGCATCATGTCAAGGATACAAAGTGGCAAGGGTAGCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 72 bp | ATCCTTGCCACTTTGCATCCTTGCCACCTTGCATCCTaGCTACTTTCTATCCTTGCTACCCTTGCCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: ILATLHPCHLAS*LLSILATLATL Trigger: CAAAGTGGCAAGGGTAGCAAGGATAGAAAGTAGCAAGGATGCAAGGTGGCAAGGATGCAAAGTGGCAAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 72 bp | GTCACCTCCTCTTTGTATCCTTGCCACTTTGCATCCTaGCCACCTTGCATCCTTGCTACTTTCTATCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: VTSSLYPCHFAS*PPCILATFYPC Trigger: GCAAGGATAGAAAGTAGCAAGGATGCAAGGTGGCAAGGATGCAAAGTGGCAAGGATACAAAGAGGAGGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 72 bp | CTCTTTGTATCCTTGCCACTTTGCATCCTTGCCACCTaGCATCCTTGCTACTTTCTATCCTTGCTACCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LFVSLPLCILAT*HPCYFLSLLPL Trigger: CAAGGGTAGCAAGGATAGAAAGTAGCAAGGATGCAAGGTGGCAAGGATGCAAAGTGGCAAGGATACAAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 72 bp | ATCCTTGCCACCTTGCATCCTTGCTACTTTCTATCCTaGCTACCCTTGCCACTTTGTATCCTTGACATGATG | + |
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Preference number: 4 (lower is better) Translates to: ILATLHPCYFLS*LPLPLCILDMM Trigger: CATCATGTCAAGGATACAAAGTGGCAAGGGTAGCAAGGATAGAAAGTAGCAAGGATGCAAGGTGGCAAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 72 bp | TTGAGGGCCAAGACACAGACTGATCACCAAGATATCTaGTTTCTTGGCCAGATGGCCCAAATTCTCTTAACT | + |
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Preference number: 4 (lower is better) Translates to: LRAKTQTDHQDI*FLGQMAQILLT Trigger: AGTTAAGAGAATTTGGGCCATCTGGCCAAGAAACAAGATATCTTGGTGATCAGTCTGTGTCTTGGCCCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 72 bp | ACCTTGCTACTTTGTATCCTTGCCACATTTGCAACCTaGCTACTTTGTACTCTTGCTATGTTGTGTCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: TLLLCILATFAT*LLCTLAMLCPS Trigger: GCTAGGACACAACATAGCAAGAGTACAAAGTAGCAAGGTTGCAAATGTGGCAAGGATACAAAGTAGCAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| 3UTR CAA 72 bp | ATCCTTGCCACTTTGCATCCTTGCTACTTTGCATCCTaGCTACTTTGTAACCTTGCTACTTTGTATCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: ILATLHPCYFAS*LLCNLATLYPC Trigger: GCAAGGATACAAAGTAGCAAGGTTACAAAGTAGCAAGGATGCAAAGTAGCAAGGATGCAAAGTGGCAAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS GCA 90 bp | GCGTGTGACCCTGCGCTCAGAGCGGCGTCGCCGCTGGCATGCGGGTaGCTGTACCCACTGACACGAGGGCGCCCGCACCCGCCGGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: ACDPALRAASPLACG*LYPLTRGRPHPPGG Trigger: ACCACCCGGCGGGTGCGGGCGCCCTCGTGTCAGTGGGTACAGGCACCCGCATGCCAGCGGCGACGCCGCTCTGAGCGCAGGGTCACACGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS TCA 90 bp | CGCTCAGAGCGGCGTCGCCGCTGGCATGCGGGTGCCTGTACCCACTaGCACGAGGGCGCCCGCACCCGCCGGGTGGTCGACCGCACCTTT | + |
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Preference number: 5 (lower is better) Translates to: RSERRRRWHAGACTH*HEGARTRRVVDRTF Trigger: AAAGGTGCGGTCGACCACCCGGCGGGTGCGGGCGCCCTCGTGTCAGTGGGTACAGGCACCCGCATGCCAGCGGCGACGCCGCTCTGAGCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS GCA 90 bp | CACCATGCGTGTGACCCTGCGCTCAGAGCGGCGTCGCCGCTGGCATaGGGGTGCCTGTACCCACTGACACGAGGGCGCCCGCACCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: HHACDPALRAASPLA*GCLYPLTRGRPHPP Trigger: CGGCGGGTGCGGGCGCCCTCGTGTCAGTGGGTACAGGCACCCGCATGCCAGCGGCGACGCCGCTCTGAGCGCAGGGTCACACGCATGGTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS TCA 90 bp | CCACAGGCAGCACCACCACAGCCGAGGCCACCCAGACAGCTGCACTaGCCGTGCGAGCCACTGGTGCCGTGCGCCAGCGGGCTGAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: PQAAPPQPRPPRQLH*PCEPLVPCASGLSV Trigger: CACGCTCAGCCCGCTGGCGCACGGCACCAGTGGCTCGCACGGTCAGTGCAGCTGTCTGGGTGGCCTCGGCTGTGGTGGTGCTGCCTGTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS CCA 90 bp | CAGTGCGGCCGTGTAGATGATGAAGGCTGTTCGCCAGGCAGCCGCTaGCTCTGGCCACTGCATGTGGCACGTGCTCATGCCCCGGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: QCGRVDDEGCSPGSR*LWPLHVARAHAPGH Trigger: GTGCCCCGGGGCATGAGCACGTGCCACATGCAGTGGCCAGAGCCAGCGGCTGCCTGGCGAACAGCCTTCATCATCTACACGGCCGCACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS TCA 90 bp | GTGCAGGGCCGTGGCTGTTGTCCACTAGTGCCAGCCTGTGCGATCTaGCTGAGCCTCCCGTTCATCTCCTGCCCTCTCTGCATCCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: VQGRGCCPLVPACAI*LSLPFISCPLCILR Trigger: GCGGAGGATGCAGAGAGGGCAGGAGATGAACGGGAGGCTCAGTCAGATCGCACAGGCTGGCACTAGTGGACAACAGCCACGGCCCTGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS-3UTR CAA 90 bp | AGGAGCCAAGCCCATTCCCAGGACTCTATCATGGCCTGTGCCCCTCTCACCAGCGCAGGGCCGTGGCTGTaGTCCACTAGTGCCAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RSQAHSQDSIMACAPLTSAGPWL*STSASL Trigger: CAGGCTGGCACTAGTGGACAACAGCCACGGCCCTGC...GCTGGTGAGAGGGGCACAGGCCATGATAGAGTCCTGGGAATGGGCTTGGCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS CCA 90 bp | CTGGGGCAGAAGCTGCTGCTCCTTAGCAGTCCCTGTGCAGGGCCGTaGCTGTTGTCCACTAGTGCCAGCCTGTGCGATCTGACTGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: LGQKLLLLSSPCAGP*LLSTSASLCDLTEP Trigger: AGGCTCAGTCAGATCGCACAGGCTGGCACTAGTGGACAACAGCCACGGCCCTGCACAGGGACTGCTAAGGAGCAGCAGCTTCTGCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS-3UTR CAA 90 bp | ATTCTCGTTATGATGAGGATACTGAGGTGCAGAGACAGAGGGTGTGGCCAAGTGCTCAGTGTGCTGGCCTaGTCCCCAGCTGTGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: ILVMMRILRCRDRGCGQVLSVLA*SPAVAS Trigger: GGAGGCCACAGCTGGGGACAAGGCCAGCACACTGAG...CACTTGGCCACACCCTCTGTCTCTGCACCTCAGTATCCTCATCATAACGAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS GCA 72 bp | CCTGCGCTCAGAGCGGCGTCGCCGCTGGCATGCGGGTaGCTGTACCCACTGACACGAGGGCGCCCGCACCCG | + |
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Preference number: 6 (lower is better) Translates to: PALRAASPLACG*LYPLTRGRPHP Trigger: CGGGTGCGGGCGCCCTCGTGTCAGTGGGTACAGGCACCCGCATGCCAGCGGCGACGCCGCTCTGAGCGCAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS TCA 72 bp | GCACCACCACAGCCGAGGCCACCCAGACAGCTGCACTaGCCGTGCGAGCCACTGGTGCCGTGCGCCAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: APPQPRPPRQLH*PCEPLVPCASG Trigger: CCCGCTGGCGCACGGCACCAGTGGCTCGCACGGTCAGTGCAGCTGTCTGGGTGGCCTCGGCTGTGGTGGTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS GCA 72 bp | TGTGACCCTGCGCTCAGAGCGGCGTCGCCGCTGGCATaGGGGTGCCTGTACCCACTGACACGAGGGCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: CDPALRAASPLA*GCLYPLTRGRP Trigger: CGGGCGCCCTCGTGTCAGTGGGTACAGGCACCCGCATGCCAGCGGCGACGCCGCTCTGAGCGCAGGGTCACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS TCA 72 bp | GGACGAAGAGTGCCACCACGGCCACCACCATGCGTGTaGCCCTGCGCTCAGAGCGGCGTCGCCGCTGGCATG | + |
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Preference number: 6 (lower is better) Translates to: GRRVPPRPPPCV*PCAQSGVAAGM Trigger: CATGCCAGCGGCGACGCCGCTCTGAGCGCAGGGTCACACGCATGGTGGTGGCCGTGGTGGCACTCTTCGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS GCA 72 bp | AGGCAGCACCACCACAGCCGAGGCCACCCAGACAGCTaGACTGACCGTGCGAGCCACTGGTGCCGTGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: RQHHHSRGHPDS*TDRASHWCRAP Trigger: TGGCGCACGGCACCAGTGGCTCGCACGGTCAGTGCAGCTGTCTGGGTGGCCTCGGCTGTGGTGGTGCTGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS CCA 72 bp | GATGATGAAGGCTGTTCGCCAGGCAGCCGCTGGCTCTaGCCACTGCATGTGGCACGTGCTCATGCCCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: DDEGCSPGSRWL*PLHVARAHAPG Trigger: CCCCGGGGCATGAGCACGTGCCACATGCAGTGGCCAGAGCCAGCGGCTGCCTGGCGAACAGCCTTCATCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS CCA 72 bp | AAGCTGCTGCTCCTTAGCAGTCCCTGTGCAGGGCCGTaGCTGTTGTCCACTAGTGCCAGCCTGTGCGATCTG | + |
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Preference number: 6 (lower is better) Translates to: KLLLLSSPCAGP*LLSTSASLCDL Trigger: CAGATCGCACAGGCTGGCACTAGTGGACAACAGCCACGGCCCTGCACAGGGACTGCTAAGGAGCAGCAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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| CDS CAA 72 bp | CTGCTCCTTAGCAGTCCCTGTGCAGGGCCGTGGCTGTaGTCCACTAGTGCCAGCCTGTGCGATCTGACTGAG | + |
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Preference number: 6 (lower is better) Translates to: LLLSSPCAGPWL*STSASLCDLTE Trigger: CTCAGTCAGATCGCACAGGCTGGCACTAGTGGACAACAGCCACGGCCCTGCACAGGGACTGCTAAGGAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053239.4 |
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