Pregenerated sensors for SSTR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047904Ensembl transcript IDs: ENSMUST00000067591.3, ENSMUST00000106630.2, ENSMUST00000146390.3
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATGAACATATTATTATATTATCCTATGAACATACATACTGCTCATaGTCCTCCAGTGTCTGGGGATGGCCCATGCAAGACAGATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: YEHIIILSYEHTYCS*SSSVWGWPMQDRCW Trigger: CCAGCATCTGTCTTGCATGGGCCATCCCCAGACACTGGAGGAGCATGAGCAGTATGTATGTTCATAGGATAATATAATAATATGTTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| 3UTR GCA 90 bp | TTATTCTATGAACATATTATTATATTATCCTATGAACATACATACTaGTCATGCTCCTCCAGTGTCTGGGGATGGCCCATGCAAGACAGA | + |
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Preference number: 1 (lower is better) Translates to: LFYEHIIILSYEHTY*SCSSSVWGWPMQDR Trigger: TCTGTCTTGCATGGGCCATCCCCAGACACTGGAGGAGCATGAGCAGTATGTATGTTCATAGGATAATATAATAATATGTTCATAGAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTGTCTGGGGATGGCCCATGCAAGACAGATGCTGGAAGCTTAGATTGGACCGGGACATGTTTGTGTaGCCGGGGAGGGGAGAATAT | + |
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Preference number: 2 (lower is better) Translates to: SSVWGWPMQDRCWKLRLDRDMFV*PGRGEY Trigger: ATATTCTCCCCTCCCCGGTCACACAAACATGTCCCG...GTCCAATCTAAGCTTCCAGCATCTGTCTTGCATGGGCCATCCCCAGACACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGATGGCCCATGCAAGACAGATGCTGGAAGCTTAGATTGGACTGACTGTGACACAGGAGTCAGGGCTTaGCTAGTGTGTGTGCATGTT | + |
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Preference number: 2 (lower is better) Translates to: GDGPCKTDAGSLDWTDCDTGVRA*LVCVHV Trigger: AACATGCACACACACTAGCCAAGCCCTGACTCCTGT...GTCACAGTCAGTCCAATCTAAGCTTCCAGCATCTGTCTTGCATGGGCCATCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| 3UTR-3UTR GCA 90 bp | CAAATCCTGTTCTCTGAACGGGGTGCGTGTAGAACACAGCTCTGTTCTAGAAGCGGTTTTTCCGGTTTCTaGCGGGCAGCTGTTTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: QILFSERGACRTQLCSRSGFSGF*RAAVFH Trigger: GTGGAAAACAGCTGCCCGGCAGAAACCGGAAAAACC...GCTTCTAGAACAGAGCTGTGTTCTACACGCACCCCGTTCAGAGAACAGGATTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| 3UTR-3UTR GCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGGGTTTTTCCGGTTTCTaGCGGGCAGCTGTTTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQGFSGF*RAAVFH Trigger: GTGGAAAACAGCTGCCCGGCAGAAACCGGAAAAACC...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| 3UTR TCA 72 bp | CGGGCAGCTGTTTTCCACCAGGTCACACCCAGGCAATaGTGTCTTCCGCTCCGGATTGTGAATTGTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: RAAVFHQVTPRQ*CLPLRIVNCLP Trigger: AGGCAGACAATTCACAATCCGGAGCGGAAGACATCATTGCCTGGGTGTGACCTGGTGGAAAACAGCTGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| 3UTR CCA 72 bp | CAGGGAATGGGAGACACACTGACAGGAGTCAGGGCTTaGCTAGTGTGTGTGCATGTTGCGTTCCTGGGTTGT | + |
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Preference number: 3 (lower is better) Translates to: QGMGDTLTGVRA*LVCVHVAFLGC Trigger: ACAACCCAGGAACGCAACATGCACACACACTAGCCAAGCCCTGACTCCTGTCAGTGTGTCTCCCATTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| 3UTR-3UTR CAA 90 bp | GGGGATGGCCCATGCAAGACAGATGCTGGAAGCTTAGATTGGACTGACTGTGACGACAGGAGTCAGGGCTaGGCTAGTGTGTGTGCATGT | + |
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Preference number: 3 (lower is better) Translates to: GDGPCKTDAGSLDWTDCDDRSQG*ASVCAC Trigger: ACATGCACACACACTAGCCAAGCCCTGACTCCTGTC...GTCACAGTCAGTCCAATCTAAGCTTCCAGCATCTGTCTTGCATGGGCCATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| 3UTR CCA 72 bp | GATGGCCCATGCAAGACAGATGCTGGAAGCTTAGATTaGACTGACTGTGACGTGGCGAGTCCTTTTCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: DGPCKTDAGSLD*TDCDVASPFLQ Trigger: CTGAAGAAAAGGACTCGCCACGTCACAGTCAGTCCAATCTAAGCTTCCAGCATCTGTCTTGCATGGGCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| 3UTR CCA 72 bp | CATACATACTGCTCATGCTCCTCCAGTGTCTGGGGATaGCCCATGCAAGACAGATGCTGGAAGCTTAGATTG | + |
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Preference number: 3 (lower is better) Translates to: HTYCSCSSSVWG*PMQDRCWKLRL Trigger: CAATCTAAGCTTCCAGCATCTGTCTTGCATGGGCCATCCCCAGACACTGGAGGAGCATGAGCAGTATGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| 3UTR-3UTR CAA 90 bp | GGCCCATGCAAGACAGATGCTGGAAGCTTAGATTGGACTGACTGTGACGTGGCGGACTTTGATTTAGTTTaGGTTTTTCCGGTTTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: GPCKTDAGSLDWTDCDVADFDLV*VFPVSA Trigger: GGCAGAAACCGGAAAAACCAAAACTAAATCAAAGTC...CGCCACGTCACAGTCAGTCCAATCTAAGCTTCCAGCATCTGTCTTGCATGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| 3UTR TCA 72 bp | AGCTACTTGGGCTTACAAACACGGGACATGTTTGTGTaGCCGGGGAGGGGAGAATATACAAATGTAAATATC | + |
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Preference number: 3 (lower is better) Translates to: SYLGLQTRDMFV*PGRGEYTNVNI Trigger: GATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGTGTTTGTAAGCCCAAGTAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| 3UTR GCA 72 bp | ATTATTATATTATCCTATGAACATACATACTGCTCATaGTCCTCCAGTGTCTGGGGATGGCCCATGCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: IIILSYEHTYCS*SSSVWGWPMQD Trigger: GTCTTGCATGGGCCATCCCCAGACACTGGAGGAGCATGAGCAGTATGTATGTTCATAGGATAATATAATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| 3UTR-3UTR CAA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGGACTTTGATTTAGTTTaGGTTTTTCCGGTTTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQDFDLV*VFPVSA Trigger: GGCAGAAACCGGAAAAACCAAAACTAAATCAAAGTC...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR TCA 90 bp | AGGGGAGGCGGGAAGCCAGGGAATGGGAGACACACTGACAGGAGTCAGGGCTTGATTCGCCTGGCCAGTTaGTGGTACAGCTGCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RGGGKPGNGRHTDRSQGLIRLAS*WYSCSC Trigger: GCAGGAGCAGCTGTACCATCAACTGGCCAGGCGAAT...CAAGCCCTGACTCCTGTCAGTGTGTCTCCCATTCCCTGGCTTCCCGCCTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR GCA 90 bp | AGGGGAGGCGGGAAGCCAGGGAATGGGAGACACACTGACAGGAGTCAGGGCTTGTCTGGTTGGAGCCATTaGTTGGCCCCAGTGAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: RGGGKPGNGRHTDRSQGLSGWSH*LAPVSR Trigger: ACGGCTCACTGGGGCCAAGCAATGGCTCCAACCAGA...CAAGCCCTGACTCCTGTCAGTGTGTCTCCCATTCCCTGGCTTCCCGCCTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR GCA 90 bp | TCTGCCGGGCAGCTGTTTTCCACCAGGTCACACCCAGGCAATGATGTCTTCCGCTCCTGCCCCACTGGTTaGTCCGGAGGCCGGCGTATA | + |
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Preference number: 4 (lower is better) Translates to: SAGQLFSTRSHPGNDVFRSCPTG*SGGRRI Trigger: TATACGCCGGCCTCCGGAGCAACCAGTGGGGCAGGA...GCGGAAGACATCATTGCCTGGGTGTGACCTGGTGGAAAACAGCTGCCCGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR TCA 90 bp | TCCAGTGTCTGGGGATGGCCCATGCAAGACAGATGCTGGAAGCTTAGATTGGACGGGCTGGGGTGGGACTaGTGGCCACAGACACGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSVWGWPMQDRCWKLRLDGLGWD*WPQTRK Trigger: CTTCCGTGTCTGTGGCCATCAGTCCCACCCCAGCCC...GTCCAATCTAAGCTTCCAGCATCTGTCTTGCATGGGCCATCCCCAGACACTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR GCA 90 bp | TTCCGGTTTCTGCCGGGCAGCTGTTTTCCACCAGGTCACACCCAGGCAATGATGTGGTACAGCTGCTCCTaGCCCACTGGTTGCTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: FRFLPGSCFPPGHTQAMMWYSCS*PTGCSG Trigger: TCCGGAGCAACCAGTGGGGCAGGAGCAGCTGTACCA...CATCATTGCCTGGGTGTGACCTGGTGGAAAACAGCTGCCCGGCAGAAACCGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR CCA 90 bp | AGCCAGGGAATGGGAGACACACTGACAGGAGTCAGGGCTTGGCTAGTGTGTGTGCGCCCCGGATTCGCCTaGCCAGTTGATGGTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: SQGMGDTLTGVRAWLVCVRPGFA*PVDGTA Trigger: AGCTGTACCATCAACTGGCCAGGCGAATCCGGGGCG...CACACACACTAGCCAAGCCCTGACTCCTGTCAGTGTGTCTCCCATTCCCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR TCA 90 bp | ACTGACAGGAGTCAGGGCTTGGCTAGTGTGTGTGCATGTTGCGTTCCTGGGTTGGCCCCAGTGAGCCGTTaGGGTCAAATGGAGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TDRSQGLASVCACCVPGLAPVSR*GQMERT Trigger: TGTCCTCTCCATTTGACCTCAACGGCTCACTGGGGC...CAACCCAGGAACGCAACATGCACACACACTAGCCAAGCCCTGACTCCTGTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR CCA 90 bp | AGCCAGGGAATGGGAGACACACTGACAGGAGTCAGGGCTTGGCTAGTGTGTGTGTTGAGGAGGGTCCTCTaGGTCTCCGTGGTCTCATTC | + |
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Preference number: 4 (lower is better) Translates to: SQGMGDTLTGVRAWLVCVLRRVL*VSVVSF Trigger: GAATGAGACCACGGAGACCCAGAGGACCCTCCTCAA...CACACACACTAGCCAAGCCCTGACTCCTGTCAGTGTGTCTCCCATTCCCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| 3UTR CAA 72 bp | CCAGGGAATGGGAGACACACTGACAGGAGTCAGGGCTaGGCTAGTGTGTGTGCATGTTGCGTTCCTGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: PGNGRHTDRSQG*ASVCACCVPGL Trigger: CAACCCAGGAACGCAACATGCACACACACTAGCCAAGCCCTGACTCCTGTCAGTGTGTCTCCCATTCCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR TCA 90 bp | TTTCCGGTTTCTGCCGGGCAGCTGTTTTCCACCAGGTCACACCCAGGCAATGATGGAGCCAGCAGAAGATaGAGACAGCCACTACGATGG | + |
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Preference number: 4 (lower is better) Translates to: FPVSAGQLFSTRSHPGNDGASRR*RQPLRW Trigger: CCATCGTAGTGGCTGTCTTCATCTTCTGCTGGCTCC...ATCATTGCCTGGGTGTGACCTGGTGGAAAACAGCTGCCCGGCAGAAACCGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR GCA 90 bp | ACTGACAGGAGTCAGGGCTTGGCTAGTGTGTGTGCATGTTGCGTTCCTGGGTTGAGCCGGGATTTGTCCTaGTTACTGTCGCTCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TDRSQGLASVCACCVPGLSRDLS*LLSLLS Trigger: GGAGAGGAGCGACAGTAAGCAGGACAAATCCCGGCT...CAACCCAGGAACGCAACATGCACACACACTAGCCAAGCCCTGACTCCTGTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR CCA 90 bp | TTTCCGGTTTCTGCCGGGCAGCTGTTTTCCACCAGGTCACACCCAGGCAATGATTTGCCAAAAGGCCAGTaGACTAGCGCCACCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: FPVSAGQLFSTRSHPGNDLPKGQ*TSATCM Trigger: CATGCAGGTGGCGCTAGTCCACTGGCCTTTTGGCAA...ATCATTGCCTGGGTGTGACCTGGTGGAAAACAGCTGCCCGGCAGAAACCGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR TCA 90 bp | GGGGATGGCCCATGCAAGACAGATGCTGGAAGCTTAGATTGGACTGACTGTGACTTTGGAGGTCTCCATTaGGGAGGGTCCTCTGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GDGPCKTDAGSLDWTDCDFGGLH*GGSSGS Trigger: AGACCCAGAGGACCCTCCTCAATGGAGACCTCCAAA...GTCACAGTCAGTCCAATCTAAGCTTCCAGCATCTGTCTTGCATGGGCCATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR GCA 90 bp | TTTCCGGTTTCTGCCGGGCAGCTGTTTTCCACCAGGTCACACCCAGGCAATGATCCACAAAGTCAAACATaGCTTTCAGGGCTGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: FPVSAGQLFSTRSHPGNDPQSQT*LSGLGW Trigger: CCACCCCAGCCCTGAAAGGCATGTTTGACTTTGTGG...ATCATTGCCTGGGTGTGACCTGGTGGAAAACAGCTGCCCGGCAGAAACCGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR CCA 90 bp | ACTGACAGGAGTCAGGGCTTGGCTAGTGTGTGTGCATGTTGCGTTCCTGGGTTGTGTCATGTCGTAGTATaGCTCGGTCTGGTTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: TDRSQGLASVCACCVPGLCHVVV*LGLVGA Trigger: GGCTCCAACCAGACCGAGCCATACTACGACATGACA...CAACCCAGGAACGCAACATGCACACACACTAGCCAAGCCCTGACTCCTGTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR TCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGGGGCTGGGGTGGGACTaGTGGCCACAGACACGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQGLGWD*WPQTRK Trigger: CTTCCGTGTCTGTGGCCATCAGTCCCACCCCAGCCC...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CCA 90 bp | ATCCTGTTCTCTGAACGGGGTGCGTGTAGAACACAGCTCTGTTCTAGAAGCCGGGCCGTTGAGGTCAAATaGAGAGGACACCCACACTTG | + |
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Preference number: 4 (lower is better) Translates to: ILFSERGACRTQLCSRSRAVEVK*RGHPHL Trigger: CAAGTGTGGGTGTCCTCTCCATTTGACCTCAACGGC...CCGGCTTCTAGAACAGAGCTGTGTTCTACACGCACCCCGTTCAGAGAACAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR GCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGTCCTGCCCCACTGGTTaGTCCGGAGGCCGGCGTATA | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQSCPTG*SGGRRI Trigger: TATACGCCGGCCTCCGGAGCAACCAGTGGGGCAGGA...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR GCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGTGGTACAGCTGCTCCTaGCCCACTGGTTGCTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQWYSCS*PTGCSG Trigger: TCCGGAGCAACCAGTGGGGCAGGAGCAGCTGTACCA...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGCTAGCGCCACCTGCATaGCCAAGAAGGGCAGCCCTA | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQLAPPA*PRRAAL Trigger: TAGGGCTGCCCTTCTTGGCCATGCAGGTGGCGCTAG...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGCGCCCCGGATTCGCCTaGCCAGTTGATGGTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQRPGFA*PVDGTA Trigger: AGCTGTACCATCAACTGGCCAGGCGAATCCGGGGCG...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR TCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGGCCCCAGTGAGCCGTTaGGGTCAAATGGAGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQAPVSR*GQMERT Trigger: TGTCCTCTCCATTTGACCTCAACGGCTCACTGGGGC...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR TCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGATTCGCCTGGCCAGTTaGTGGTACAGCTGCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQIRLAS*WYSCSC Trigger: GCAGGAGCAGCTGTACCATCAACTGGCCAGGCGAAT...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR GCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGTCTGGTTGGAGCCATTaGTTGGCCCCAGTGAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQSGWSH*LAPVSR Trigger: ACGGCTCACTGGGGCCAAGCAATGGCTCCAACCAGA...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR GCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGCCCGGCAGATGGCCTTaGCAAAAGGCCAGTGGACTA | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQPGRWP*QKASGL Trigger: TAGTCCACTGGCCTTTTGGCAAGGCCATCTGCCGGG...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CCA 90 bp | AATGGGAGACACACTGACAGGAGTCAGGGCTTGGCTAGTGTGTGTGCATGTTGCCTGACTTTTTCCTCTTaGATGATCCCACTCGGATTC | + |
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Preference number: 4 (lower is better) Translates to: NGRHTDRSQGLASVCACCLTFSS*MIPLGF Trigger: GAATCCGAGTGGGATCATCCAAGAGGAAAAAGTCAG...GCAACATGCACACACACTAGCCAAGCCCTGACTCCTGTCAGTGTGTCTCCCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR TCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGGGAGCCAGCAGAAGATaGAGACAGCCACTACGATGG | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQGASRR*RQPLRW Trigger: CCATCGTAGTGGCTGTCTTCATCTTCTGCTGGCTCC...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGTTGCCAAAAGGCCAGTaGACTAGCGCCACCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQLPKGQ*TSATCM Trigger: CATGCAGGTGGCGCTAGTCCACTGGCCTTTTGGCAA...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR TCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGAGCGGTCGATGCTCATaGCCGTCAAGCAGAAGATAC | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQSGRCS*PSSRRY Trigger: GTATCTTCTGCTTGACGGTCATGAGCATCGACCGCT...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR GCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGCCACAAAGTCAAACATaGCTTTCAGGGCTGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQPQSQT*LSGLGW Trigger: CCACCCCAGCCCTGAAAGGCATGTTTGACTTTGTGG...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGGCCGTTGAGGTCAAATaGAGAGGACACCCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQAVEVK*RGHPHL Trigger: CAAGTGTGGGTGTCCTCTCCATTTGACCTCAACGGC...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGTGTCATGTCGTAGTATaGCTCGGTCTGGTTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQCHVVV*LGLVGA Trigger: GGCTCCAACCAGACCGAGCCATACTACGACATGACA...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR GCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGCTACGATGGACACCATaGGGGTCACCTTTTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQLRWTP*GSPFSL Trigger: CAGAGAAAAAGGTGACCCGCATGGTGTCCATCGTAG...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR TCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGCTTTTTCCTCTTGGATaGTCCCACTCGGATTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQLFPLG*SHSDSR Trigger: TCTGGAATCCGAGTGGGATCATCCAAGAGGAAAAAG...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CCA 90 bp | TTATTATATTATCCTATGAACATACATACTGCTCATGCTCCTCCAGTGTCTGGGTCCTCTGGGTCTCCGTaGTCTCATTCAGCCGGGATT | + |
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Preference number: 4 (lower is better) Translates to: LLYYPMNIHTAHAPPVSGSSGSP*SHSAGI Trigger: AATCCCGGCTGAATGAGACCACGGAGACCCAGAGGA...CCCAGACACTGGAGGAGCATGAGCAGTATGTATGTTCATAGGATAATATAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR CCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGCTGACTTTTTCCTCTTaGATGATCCCACTCGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQLTFSS*MIPLGF Trigger: GAATCCGAGTGGGATCATCCAAGAGGAAAAAGTCAG...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR TCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGGTGAATTGTCTGCCTTaGCCAAGCAAAGAACATTCT | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQVNCLP*PSKEHS Trigger: AGAATGTTCTTTGCTTGGTCAAGGCAGACAATTCAC...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106630.2 |
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| CDS-3UTR GCA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGCATGAAGAGTTCATCTaGAATGGCCAGGTTAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQHEEFI*NGQVKD Trigger: ATCCTTAACCTGGCCATTGCAGATGAACTCTTCATG...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR GCA 90 bp | TTATTATATTATCCTATGAACATACATACTGCTCATGCTCCTCCAGTGTCTGGGCTACGATGGACACCATaGGGGTCACCTTTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLYYPMNIHTAHAPPVSGLRWTP*GSPFSL Trigger: CAGAGAAAAAGGTGACCCGCATGGTGTCCATCGTAG...CCCAGACACTGGAGGAGCATGAGCAGTATGTATGTTCATAGGATAATATAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR TCA 90 bp | TTATTATATTATCCTATGAACATACATACTGCTCATGCTCCTCCAGTGTCTGGGCTTTTTCCTCTTGGATaGTCCCACTCGGATTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLYYPMNIHTAHAPPVSGLFPLG*SHSDSR Trigger: TCTGGAATCCGAGTGGGATCATCCAAGAGGAAAAAG...CCCAGACACTGGAGGAGCATGAGCAGTATGTATGTTCATAGGATAATATAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR GCA 90 bp | TTATTATATTATCCTATGAACATACATACTGCTCATGCTCCTCCAGTGTCTGGGCATGAAGAGTTCATCTaGAATGGCCAGGTTAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLYYPMNIHTAHAPPVSGHEEFI*NGQVKD Trigger: ATCCTTAACCTGGCCATTGCAGATGAACTCTTCATG...CCCAGACACTGGAGGAGCATGAGCAGTATGTATGTTCATAGGATAATATAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | TCTGCCGGGCAGCTGTTTTCCACCAGGTCACACCCAGGCAATGATGTCTTCCGCCTCCTGCCCCACTGGTaGCTCCGGAGGCCGGCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SAGQLFSTRSHPGNDVFRLLPHW*LRRPAY Trigger: ATACGCCGGCCTCCGGAGCAACCAGTGGGGCAGGAG...GCGGAAGACATCATTGCCTGGGTGTGACCTGGTGGAAAACAGCTGCCCGGCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS TCA 90 bp | GTCGTAGTATGGCTCGGTCTGGTTGGAGCCATTGCTTGGCCCCAGTaGGCCGTTGAGGTCAAATGGAGAGGACACCCACACTTGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VVVWLGLVGAIAWPQ*AVEVKWRGHPHLAP Trigger: GGGAGCCAAGTGTGGGTGTCCTCTCCATTTGACCTCAACGGCTCACTGGGGCCAAGCAATGGCTCCAACCAGACCGAGCCATACTACGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067591.3 ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS GCA 90 bp | AGGGTCCTCTGGGTCTCCGTGGTCTCATTCAGCCGGGATTTGTCCTaGTTACTGTCGCTCCTCTCCCCATCCTCCGTACCACTCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVLWVSVVSFSRDLS*LLSLLSPSSVPLTL Trigger: CAAGGTGAGTGGTACGGAGGATGGGGAGAGGAGCGACAGTAAGCAGGACAAATCCCGGCTGAATGAGACCACGGAGACCCAGAGGACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | TTTCCGGTTTCTGCCGGGCAGCTGTTTTCCACCAGGTCACACCCAGGCAATGATGTCTGGTTGGAGCCATaGCTTGGCCCCAGTGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FPVSAGQLFSTRSHPGNDVWLEP*LGPSEP Trigger: CGGCTCACTGGGGCCAAGCAATGGCTCCAACCAGAC...ATCATTGCCTGGGTGTGACCTGGTGGAAAACAGCTGCCCGGCAGAAACCGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | GGCCCATGCAAGACAGATGCTGGAAGCTTAGATTGGACTGACTGTGACGTGGCGACCCGGCAGATGGCCTaGCCAAAAGGCCAGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GPCKTDAGSLDWTDCDVATRQMA*PKGQWT Trigger: AGTCCACTGGCCTTTTGGCAAGGCCATCTGCCGGGT...CGCCACGTCACAGTCAGTCCAATCTAAGCTTCCAGCATCTGTCTTGCATGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS TCA 90 bp | ATGGCTCGGTCTGGTTGGAGCCATTGCTTGGCCCCAGTGAGCCGTTaGGGTCAAATGGAGAGGACACCCACACTTGGCTCCCATTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: MARSGWSHCLAPVSR*GQMERTPTLGSHST Trigger: AGTTGAATGGGAGCCAAGTGTGGGTGTCCTCTCCATTTGACCTCAACGGCTCACTGGGGCCAAGCAATGGCTCCAACCAGACCGAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067591.3 ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | TTTCCGGTTTCTGCCGGGCAGCTGTTTTCCACCAGGTCACACCCAGGCAATGATGTTTGGAGGTCTCCATaGAGGAGGGTCCTCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FPVSAGQLFSTRSHPGNDVWRSP*RRVLWV Trigger: GACCCAGAGGACCCTCCTCAATGGAGACCTCCAAAC...ATCATTGCCTGGGTGTGACCTGGTGGAAAACAGCTGCCCGGCAGAAACCGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGCTCCTGCCCCACTGGTaGCTCCGGAGGCCGGCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQLLPHW*LRRPAY Trigger: ATACGCCGGCCTCCGGAGCAACCAGTGGGGCAGGAG...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | TTTCCGGTTTCTGCCGGGCAGCTGTTTTCCACCAGGTCACACCCAGGCAATGATTCATTCAGCCGGGATTaGTCCTGCTTACTGTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPVSAGQLFSTRSHPGNDSFSRD*SCLLSL Trigger: GAGCGACAGTAAGCAGGACAAATCCCGGCTGAATGA...ATCATTGCCTGGGTGTGACCTGGTGGAAAACAGCTGCCCGGCAGAAACCGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGGTCTGGTTGGAGCCATaGCTTGGCCCCAGTGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQVWLEP*LGPSEP Trigger: CGGCTCACTGGGGCCAAGCAATGGCTCCAACCAGAC...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGACCCGGCAGATGGCCTaGCCAAAAGGCCAGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQTRQMA*PKGQWT Trigger: AGTCCACTGGCCTTTTGGCAAGGCCATCTGCCGGGT...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGCGGGGTCGCCTCCATTaGGCTGACTTAATGGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQRGRLH*ADLMGC Trigger: GCACCCCATTAAGTCAGCCAAATGGAGGCGACCCCG...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | TCCAGTGTCTGGGGATGGCCCATGCAAGACAGATGCTGGAAGCTTAGATTGGACAAGCTCTTCTTGAAGTaGTCAGACAAGAAGGCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SSVWGWPMQDRCWKLRLDKLFLK*SDKKAY Trigger: GTACGCCTTCTTGTCTGACAACTTCAAGAAGAGCTT...GTCCAATCTAAGCTTCCAGCATCTGTCTTGCATGGGCCATCCCCAGACACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | TGCAAGACAGATGCTGGAAGCTTAGATTGGACTGACTGTGACGTGGCGAGTCCTTCTGACTTTTTCCTCTaGGATGATCCCACTCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: CKTDAGSLDWTDCDVASPSDFFL*DDPTRI Trigger: AATCCGAGTGGGATCATCCAAGAGGAAAAAGTCAGA...AGGACTCGCCACGTCACAGTCAGTCCAATCTAAGCTTCCAGCATCTGTCTTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGCACCACACAGCTACATaGATCATCTTGGCTGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQHHTAT*IILAVR Trigger: CCGGACAGCCAAGATGATCAATGTAGCTGTGTGGTG...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGTCTGACTTTTTCCTCTaGGATGATCCCACTCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQSDFFL*DDPTRI Trigger: AATCCGAGTGGGATCATCCAAGAGGAAAAAGTCAGA...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGAAGCTCTTCTTGAAGTaGTCAGACAAGAAGGCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQKLFLK*SDKKAY Trigger: GTACGCCTTCTTGTCTGACAACTTCAAGAAGAGCTT...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS-3UTR CAA 90 bp | ACGGGACATGTTTGTGTGACCGGGGAGGGGAGAATATACAAATGTAAATATCAGTGTGAATTGTCTGCCTaGACCAAGCAAAGAACATTC | + |
|
Preference number: 5 (lower is better) Translates to: TGHVCVTGEGRIYKCKYQCELSA*TKQRTF Trigger: GAATGTTCTTTGCTTGGTCAAGGCAGACAATTCACA...CTGATATTTACATTTGTATATTCTCCCCTCCCCGGTCACACAAACATGTCCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106630.2 |
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| CDS TCA 72 bp | TGGCTCGGTCTGGTTGGAGCCATTGCTTGGCCCCAGTaGGCCGTTGAGGTCAAATGGAGAGGACACCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: WLGLVGAIAWPQ*AVEVKWRGHPH Trigger: GTGTGGGTGTCCTCTCCATTTGACCTCAACGGCTCACTGGGGCCAAGCAATGGCTCCAACCAGACCGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067591.3 ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS CAA 72 bp | GTCCTCTGGGTCTCCGTGGTCTCATTCAGCCGGGATTaGTCCTGCTTACTGTCGCTCCTCTCCCCATCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLWVSVVSFSRD*SCLLSLLSPSS Trigger: GGAGGATGGGGAGAGGAGCGACAGTAAGCAGGACAAATCCCGGCTGAATGAGACCACGGAGACCCAGAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS CAA 90 bp | TTGAGGAGGGTCCTCTGGGTCTCCGTGGTCTCATTCAGCCGGGATTaGTCCTGCTTACTGTCGCTCCTCTCCCCATCCTCCGTACCACTC | + |
|
Preference number: 6 (lower is better) Translates to: LRRVLWVSVVSFSRD*SCLLSLLSPSSVPL Trigger: GAGTGGTACGGAGGATGGGGAGAGGAGCGACAGTAAGCAGGACAAATCCCGGCTGAATGAGACCACGGAGACCCAGAGGACCCTCCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS GCA 72 bp | TGGGTCTCCGTGGTCTCATTCAGCCGGGATTTGTCCTaGTTACTGTCGCTCCTCTCCCCATCCTCCGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: WVSVVSFSRDLS*LLSLLSPSSVP Trigger: TGGTACGGAGGATGGGGAGAGGAGCGACAGTAAGCAGGACAAATCCCGGCTGAATGAGACCACGGAGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS CCA 72 bp | GATAATGAAACCTGTGTACCACGCCCCGGATTCGCCTaGCCAGTTGATGGTACAGCTGCTCCTGCCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: DNETCVPRPGFA*PVDGTAAPAPL Trigger: CAGTGGGGCAGGAGCAGCTGTACCATCAACTGGCCAGGCGAATCCGGGGCGTGGTACACAGGTTTCATTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067591.3 ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS CAA 72 bp | GTCTGGTTGGAGCCATTGCTTGGCCCCAGTGAGCCGTaGAGGTCAAATGGAGAGGACACCCACACTTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VWLEPLLGPSEP*RSNGEDTHTWL Trigger: GAGCCAAGTGTGGGTGTCCTCTCCATTTGACCTCAACGGCTCACTGGGGCCAAGCAATGGCTCCAACCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067591.3 ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS CAA 90 bp | TATGGCTCGGTCTGGTTGGAGCCATTGCTTGGCCCCAGTGAGCCGTaGAGGTCAAATGGAGAGGACACCCACACTTGGCTCCCATTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: YGSVWLEPLLGPSEP*RSNGEDTHTWLPFN Trigger: GTTGAATGGGAGCCAAGTGTGGGTGTCCTCTCCATTTGACCTCAACGGCTCACTGGGGCCAAGCAATGGCTCCAACCAGACCGAGCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067591.3 ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS CCA 72 bp | ATACTGGTTTGGAGGTCTCCATTGAGGAGGGTCCTCTaGGTCTCCGTGGTCTCATTCAGCCGGGATTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ILVWRSPLRRVL*VSVVSFSRDLS Trigger: GGACAAATCCCGGCTGAATGAGACCACGGAGACCCAGAGGACCCTCCTCAATGGAGACCTCCAAACCAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146390.3 |
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| CDS CAA 72 bp | AGCAGAGACACACACCACACAGCTACATTGATCATCTaGGCTGTCCGGGGTCGCCTCCATTTGGCTGACTTA | + |
|
Preference number: 6 (lower is better) Translates to: SRDTHHTATLII*AVRGRLHLADL Trigger: TAAGTCAGCCAAATGGAGGCGACCCCGGACAGCCAAGATGATCAATGTAGCTGTGTGGTGTGTGTCTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067591.3 ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS CAA 90 bp | ACGATGGACACCATGCGGGTCACCTTTTTCTCTGACTTTTTCCTCTaGGATGATCCCACTCGGATTCCAGAGGACTTCACCTTGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: TMDTMRVTFFSDFFL*DDPTRIPEDFTLMM Trigger: CATCATCAAGGTGAAGTCCTCTGGAATCCGAGTGGGATCATCCAAGAGGAAAAAGTCAGAGAAAAAGGTGACCCGCATGGTGTCCATCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067591.3 ENSMUST00000106630.2 ENSMUST00000146390.3 |
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| CDS TCA 72 bp | TCACACCCAGGCAATGATGTCTTCCGCTCCGGATTGTaGATTGTCTGCCTTGACCAAGCAAAGAACATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SHPGNDVFRSGL*IVCLDQAKNIL Trigger: CAGAATGTTCTTTGCTTGGTCAAGGCAGACAATTCACAATCCGGAGCGGAAGACATCATTGCCTGGGTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067591.3 ENSMUST00000106630.2 |
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